Sed0006170 (gene) Chayote v1

Overview


Name	Sed0006170
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NHL domain-containing protein
Location	LG08: 37772623 .. 37773324 (-)
RNA-Seq Expression	Sed0006170
Synteny	Sed0006170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCCATTACATTACCGGTCGCCCACTGTTTCTGACATTCAACCATTTTGGCTCTATATAGTGAGCCCTAATCGGAATCCAAATCCCTAATCTCACTCTTCGCCGCCATGGGAGACCGTGACGGAGCTTCCAAGGAATTGGAACCCACCGGCGCCGATGCTCTTTTAGCCTCTAGACGATATACTTGTTTATGCTTCCCCGGCTTCGGACCCCGCCGGTCGGTTTCCGGCGAACTCTCTTGGTGGGACCGGGCGAAAGCTTCGAAGTTCGACGGCGACGATCACTGGTGGTCCGGCGGAATCAGATCCCTCAAGAAGCTTCGTGAATGGTCCGAGATCGTCGCCGGTCCGAAGTGGAAAACCTTCATTCGCCGGTTCAATAGAAACCGGCCCGCCGCCGTGAAGCTTGGGAAATTCCAATACGATCCCATCAGTTACGCTTTGAATTTCGATGAAGGAAATAACGGCGGTGATGTGGATTTTGAAGGGGAAGAATTCAACGGTGGGTCTCAAAATTTCGCCGGCCGGTTTTCTGCCGTGCCTCTGCAGGTTTAATTCGTCGGCGGTTGTGGTTTTTTTTGTTTTCAATTTCTTTTTCCGGTGAAGTTGAACGGACGGTTTCTGTCCGTGGTGGGATTTTAACGTATGATTGATTATTCAACTGATGAGCTGGAAGTTGACTGTTTTTGGATCAATTAGGAGA

mRNA sequence

GCCCCATTACATTACCGGTCGCCCACTGTTTCTGACATTCAACCATTTTGGCTCTATATAGTGAGCCCTAATCGGAATCCAAATCCCTAATCTCACTCTTCGCCGCCATGGGAGACCGTGACGGAGCTTCCAAGGAATTGGAACCCACCGGCGCCGATGCTCTTTTAGCCTCTAGACGATATACTTGTTTATGCTTCCCCGGCTTCGGACCCCGCCGGTCGGTTTCCGGCGAACTCTCTTGGTGGGACCGGGCGAAAGCTTCGAAGTTCGACGGCGACGATCACTGGTGGTCCGGCGGAATCAGATCCCTCAAGAAGCTTCGTGAATGGTCCGAGATCGTCGCCGGTCCGAAGTGGAAAACCTTCATTCGCCGGTTCAATAGAAACCGGCCCGCCGCCGTGAAGCTTGGGAAATTCCAATACGATCCCATCAGTTACGCTTTGAATTTCGATGAAGGAAATAACGGCGGTGATGTGGATTTTGAAGGGGAAGAATTCAACGGTGGGTCTCAAAATTTCGCCGGCCGGTTTTCTGCCGTGCCTCTGCAGGTTTAATTCGTCGGCGGTTGTGGTTTTTTTTGTTTTCAATTTCTTTTTCCGGTGAAGTTGAACGGACGGTTTCTGTCCGTGGTGGGATTTTAACGTATGATTGATTATTCAACTGATGAGCTGGAAGTTGACTGTTTTTGGATCAATTAGGAGA

Coding sequence (CDS)

ATGGGAGACCGTGACGGAGCTTCCAAGGAATTGGAACCCACCGGCGCCGATGCTCTTTTAGCCTCTAGACGATATACTTGTTTATGCTTCCCCGGCTTCGGACCCCGCCGGTCGGTTTCCGGCGAACTCTCTTGGTGGGACCGGGCGAAAGCTTCGAAGTTCGACGGCGACGATCACTGGTGGTCCGGCGGAATCAGATCCCTCAAGAAGCTTCGTGAATGGTCCGAGATCGTCGCCGGTCCGAAGTGGAAAACCTTCATTCGCCGGTTCAATAGAAACCGGCCCGCCGCCGTGAAGCTTGGGAAATTCCAATACGATCCCATCAGTTACGCTTTGAATTTCGATGAAGGAAATAACGGCGGTGATGTGGATTTTGAAGGGGAAGAATTCAACGGTGGGTCTCAAAATTTCGCCGGCCGGTTTTCTGCCGTGCCTCTGCAGGTTTAA

Protein sequence

MGDRDGASKELEPTGADALLASRRYTCLCFPGFGPRRSVSGELSWWDRAKASKFDGDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYALNFDEGNNGGDVDFEGEEFNGGSQNFAGRFSAVPLQV

Homology

[Close]

BLAST of Sed0006170 vs. NCBI nr
Match: XP_023519821.1 (uncharacterized protein LOC111783153 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 2.2e-62
Identity = 121/153 (79.08%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MGDRDGASKELEP----TGADALLASRRYTCLCFPGFGPRRSVSGELSWWDRAKA----S 60
           MGDRDG  KE+E      GADALLASRRY+C CFP FG  RS S ELSWW+RAKA    +
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYSCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120
           KFDG+DHWWSGGIRSLKKLREWSEIVAGP+WKTFIRRFNRNRPAAVKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGNNGGDVDFEGEEFNGGSQNFAGRFSAVP 146
           NFDEG+N GDVDFEG+E++GG QNF+ RFSAVP
Sbjct: 121 NFDEGHN-GDVDFEGDEYSGGFQNFSDRFSAVP 152

[Close]

BLAST of Sed0006170 vs. NCBI nr
Match: XP_022923865.1 (uncharacterized protein LOC111431456 [Cucurbita moschata])

HSP 1 Score: 248.1 bits (632), Expect = 4.9e-62
Identity = 121/153 (79.08%), Postives = 131/153 (85.62%), Query Frame = 0


Query: 1   MGDRDGASKELEP----TGADALLASRRYTCLCFPGFGPRRSVSGELSWWDRAKA----S 60
           MGDRDG  KE+E      GADALLASRRY C CFP FG  RS S ELSWW+RAKA    +
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120
           KFDG+DHWWSGGIRSLKKLREWSEIVAGP+WKTFIRRFNRNRPAAVKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGNNGGDVDFEGEEFNGGSQNFAGRFSAVP 146
           NFDEG+N GDVDFEG+E++GG QNF+ RFSAVP
Sbjct: 121 NFDEGHN-GDVDFEGDEYSGGFQNFSDRFSAVP 152

[Close]

BLAST of Sed0006170 vs. NCBI nr
Match: XP_023000665.1 (uncharacterized protein LOC111495035 [Cucurbita maxima])

HSP 1 Score: 247.3 bits (630), Expect = 8.4e-62
Identity = 120/153 (78.43%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MGDRDGASKELEP----TGADALLASRRYTCLCFPGFGPRRSVSGELSWWDRAKA----S 60
           MGDRDG  KE+E      GADALLASRRY+C CFP FG  RS S ELSWW+RAKA    +
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYSCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120
           KFDG+DHWWSGGIRSLKKLREWSEIVAGP+WKTFIRRFNRNRPAAVKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGNNGGDVDFEGEEFNGGSQNFAGRFSAVP 146
           NFDEG+N GDV+FEG+E++GG QNF+ RFSAVP
Sbjct: 121 NFDEGHN-GDVNFEGDEYSGGFQNFSDRFSAVP 152

[Close]

BLAST of Sed0006170 vs. NCBI nr
Match: XP_038894780.1 (uncharacterized protein LOC120083201 [Benincasa hispida])

HSP 1 Score: 244.6 bits (623), Expect = 5.4e-61
Identity = 118/157 (75.16%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MGDRDGASKELEP----TGADALLASRRYTCLCFPGFGPRRSVSGELSWWDR----AKAS 60
           MGDRDGA KELE      GADALLAS+RY+C CFP FGPRRS S E+SWW+R    AK++
Sbjct: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDEVSWWERVKTKAKST 60

Query: 61  KFDGDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120
           KFDG+DHWW+GGIRSLKKLREWSEIVAGP+WKTFIRRFNRNRPA VKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120

Query: 121 NFDEGNNGGDVDFEGEEFNGGS-QNFAGRFSAVPLQV 149
           NFD+G+N GDVDF+G+E++GG  QNF+ RF+AVP  V
Sbjct: 121 NFDDGHN-GDVDFDGDEYSGGGFQNFSDRFAAVPTPV 156

[Close]

BLAST of Sed0006170 vs. NCBI nr
Match: KAG6584232.1 (hypothetical protein SDJN03_20164, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019829.1 hypothetical protein SDJN02_18793, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-60
Identity = 119/153 (77.78%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 1   MGDRDGASKELEP----TGADALLASRRYTCLCFPGFGPRRSVSGELSWWDRAKA----S 60
           MGDRDG  KE+E      GADALLASRRY C CFP FG  RS S ELSWW+RAKA    +
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120
           KFDG+DHWWSGGIRSLKKLREWSEIVAGP+WKTFIRRFNRNRPAAVK GKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKPGKFQYDPISYAL 120

Query: 121 NFDEGNNGGDVDFEGEEFNGGSQNFAGRFSAVP 146
           NFDEG+N GDVDFEG+E++GG Q+F+ RFSAVP
Sbjct: 121 NFDEGHN-GDVDFEGDEYSGGFQHFSDRFSAVP 152

[Close]

BLAST of Sed0006170 vs. ExPASy TrEMBL
Match: A0A6J1ED51 (uncharacterized protein LOC111431456 OS=Cucurbita moschata OX=3662 GN=LOC111431456 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.4e-62
Identity = 121/153 (79.08%), Postives = 131/153 (85.62%), Query Frame = 0


Query: 1   MGDRDGASKELEP----TGADALLASRRYTCLCFPGFGPRRSVSGELSWWDRAKA----S 60
           MGDRDG  KE+E      GADALLASRRY C CFP FG  RS S ELSWW+RAKA    +
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120
           KFDG+DHWWSGGIRSLKKLREWSEIVAGP+WKTFIRRFNRNRPAAVKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGNNGGDVDFEGEEFNGGSQNFAGRFSAVP 146
           NFDEG+N GDVDFEG+E++GG QNF+ RFSAVP
Sbjct: 121 NFDEGHN-GDVDFEGDEYSGGFQNFSDRFSAVP 152

[Close]

BLAST of Sed0006170 vs. ExPASy TrEMBL
Match: A0A6J1KJ01 (uncharacterized protein LOC111495035 OS=Cucurbita maxima OX=3661 GN=LOC111495035 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.0e-62
Identity = 120/153 (78.43%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MGDRDGASKELEP----TGADALLASRRYTCLCFPGFGPRRSVSGELSWWDRAKA----S 60
           MGDRDG  KE+E      GADALLASRRY+C CFP FG  RS S ELSWW+RAKA    +
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYSCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120
           KFDG+DHWWSGGIRSLKKLREWSEIVAGP+WKTFIRRFNRNRPAAVKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGNNGGDVDFEGEEFNGGSQNFAGRFSAVP 146
           NFDEG+N GDV+FEG+E++GG QNF+ RFSAVP
Sbjct: 121 NFDEGHN-GDVNFEGDEYSGGFQNFSDRFSAVP 152

[Close]

BLAST of Sed0006170 vs. ExPASy TrEMBL
Match: A0A5A7ULQ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00570 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.6e-61
Identity = 119/153 (77.78%), Postives = 131/153 (85.62%), Query Frame = 0


Query: 1   MGDRDGASKELEP-TGADALLASRRYTCLCFPGFGPRRSVSGELSWWDR----AKASKFD 60
           MGDRDGA KELE   GADALLAS+RY+C CFP FGP RS S ELSWW+R    AK++KFD
Sbjct: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPNRSGSDELSWWERVKTKAKSTKFD 60

Query: 61  GDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYALNFD 120
           G+DHWW+GGIRSLKKLREWSEIVAGP+WKTFIRRFNRNRPA VKLGKFQYDPISYALNFD
Sbjct: 61  GEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120

Query: 121 EGNNGGDVDFEG-EEFNGGS--QNFAGRFSAVP 146
           EG+N GDVDFEG  E+ GG   QNF+ RF+AVP
Sbjct: 121 EGHNNGDVDFEGNHEYTGGGGFQNFSDRFAAVP 153

[Close]

BLAST of Sed0006170 vs. ExPASy TrEMBL
Match: A0A6J1GSC5 (uncharacterized protein LOC111457052 OS=Cucurbita moschata OX=3662 GN=LOC111457052 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.9e-60
Identity = 119/159 (74.84%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 1   MGDRDGASKELEPT----GADALLASRRYTCLCFPGFGPRRSVSGELSWWDRAKA----- 60
           MGDRDGA KE E T    GADA L S RY CLCFP FGPRRSVS E+SWW+RAKA     
Sbjct: 1   MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARAR 60

Query: 61  --SKFDGDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPIS 120
             +  DG+DHWW+GG+RS+KKLREWSEIVAGP+WKTFIRRFNRNRPAAVKLGKFQYDPIS
Sbjct: 61  AKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPIS 120

Query: 121 YALNFDEGNNGGDVDFEGEEFNGGSQNFAGRFSAVPLQV 149
           YALNFDEGNN GDVDFE EE NGG +NF+ RF+AVP  V
Sbjct: 121 YALNFDEGNN-GDVDFEEEECNGGFKNFSERFAAVPAPV 158

[Close]

BLAST of Sed0006170 vs. ExPASy TrEMBL
Match: A0A5D3BLD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003520 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.5e-60
Identity = 118/153 (77.12%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 1   MGDRDGASKELEP-TGADALLASRRYTCLCFPGFGPRRSVSGELSWWDR----AKASKFD 60
           MGDRDGA KELE   GADALLAS+RY+C CFP FGP RS S ELSWW+R    AK++KFD
Sbjct: 1   MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPNRSGSDELSWWERVKTKAKSTKFD 60

Query: 61  GDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYALNFD 120
           G+DHWW+G IRSLKKLREWSEIVAGP+WKTFIRRFNRNRPA VKLGKFQYDPISYALNFD
Sbjct: 61  GEDHWWTGRIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFD 120

Query: 121 EGNNGGDVDFEG-EEFNGGS--QNFAGRFSAVP 146
           EG+N GDVDFEG  E+ GG   QNF+ RF+AVP
Sbjct: 121 EGHNNGDVDFEGNHEYTGGGGFQNFSDRFAAVP 153

[Close]

BLAST of Sed0006170 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-20
Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 0


Query: 27  CLCFPGFGPRRSVS--GELSWW-----DRAKASKFDGDD-HWWSGGIRSLKKLREWSEIV 86
           C CFP F   RS +  G  SW      D +  S   GD+  WW   IR+  K+REWSEIV
Sbjct: 20  CCCFPSFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSEIV 79

Query: 87  AGPKWKTFIRRFNRNRPAAVKLG---KFQYDPISYALNFDEGNNGGDVDFEGEEF--NGG 146
           AGP+WKTFIRRFNR+           KFQYDP+SY+LNFD+       D E +E+   GG
Sbjct: 80  AGPRWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDD-------DDEEDEYVGLGG 139

[Close]

BLAST of Sed0006170 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18
Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 38  SVSGELSWWDRAKASKFDGDDHWWSGGIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAA 97
           S + + SWW R   +    +  WW   +R+  K+REWSEIVAGP+WKTFIRRFNR+    
Sbjct: 17  STTVKSSWWQRIHRNNHQ-EPRWW---VRAFLKIREWSEIVAGPRWKTFIRRFNRDPRRG 76

Query: 98  V---KLGKFQYDPISYALNFDEGNNGGDVDFEGEEFNGGSQNFAGRFSAVPL 147
                  KF+YDP+SY L+F++     D D + E   GG ++F+ R+++VP+
Sbjct: 77  QDWDDSDKFRYDPVSYTLSFED----EDKDDDDEAGVGGVRSFSMRYASVPV 120

[Close]

BLAST of Sed0006170 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 6.0e-18
Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 0


Query: 20  LASRRYTCLCFPGFGPRR-SVSGELSWWDR-AKASKFDGDDHWWSGGIRSLKKLREWSEI 79
           L ++R  C   P     + S  G   WW R     K + D+ WW   IR  +++REWSE+
Sbjct: 21  LFAKRGCCFLMPCLASSQPSTRGGSVWWQRITTVDKLEPDERWW---IRGWRRMREWSEL 80

Query: 80  VAGPKWKTFIRRFNRNR----------------------PAAVKLGKFQYDPISYALNFD 139
           VAGP+WKT+IRRF R+                         +   GKF+YD +SY+LNFD
Sbjct: 81  VAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSSDQGKFRYDQLSYSLNFD 140

Query: 140 EGNNGGDVDFEGEEFNGGSQNFAGRFSAVPLQV 149
           +GN  G  D   +EF    ++++ RF+A  L V
Sbjct: 141 DGNQTGHFD---DEF--PYRDYSMRFAAPSLPV 165

[Close]

BLAST of Sed0006170 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.0e-17
Identity = 56/141 (39.72%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 22  SRRYTCLCFPGFGPRRSVSGELS-WWDRAK-ASKFDGDDHWWSGGIRSLKKLREWSEIVA 81
           ++R  C   P  G  +      S WW R +   K + D+ WW  G     K+REWSEIVA
Sbjct: 606 AKRGCCFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERWWVSG---WMKMREWSEIVA 665

Query: 82  GPKWKTFIRRFNR------------NRPAAVKLGKFQYDPISYALNFDEGNNGGDVDFEG 141
           GPKWKTFIRRF R            NRP  V    F+YD  SY+LNFD+G   G  +   
Sbjct: 666 GPKWKTFIRRFGRNHCCNGGIDGGCNRPEHV---SFRYDSWSYSLNFDDGKQTGHFE--- 725

Query: 142 EEFNGGSQNFAGRFSAVPLQV 149
           +EF    ++++ RF+A  L V
Sbjct: 726 DEF--PYRDYSMRFAAPSLPV 735

[Close]

BLAST of Sed0006170 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 46/124 (37.10%), Postives = 57/124 (45.97%), Query Frame = 0


Query: 14  TGADALLASRRYTCLCFPGFGPRRSVSGELSWWDRAKASKFDGDDH-----WWSG----- 73
           T  + LL+        F G G  RS S   + W R       GDD       WSG     
Sbjct: 3   TDRENLLSDDYEETAAFCGCGYFRSFS--FTRWRR-------GDDESRSRGGWSGCLQEE 62

Query: 74  -----GIRSLKKLREWSEIVAGPKWKTFIRRFNRNRPAAVKLGKFQYDPISYALNFDEGN 123
                G   LK L+E SE +AGPKWK FIR F+  R    +   F YD  +Y+LNFD+G 
Sbjct: 63  RRGNWGSEKLKGLKEISEKIAGPKWKNFIRSFSSGRKKMRRDVDFTYDLKNYSLNFDDGG 117

The following BLAST results are available for this feature:

BLAST of Sed0006170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519821.1	2.2e-62	79.08	uncharacterized protein LOC111783153 [Cucurbita pepo subsp. pepo]	[more]
XP_022923865.1	4.9e-62	79.08	uncharacterized protein LOC111431456 [Cucurbita moschata]	[more]
XP_023000665.1	8.4e-62	78.43	uncharacterized protein LOC111495035 [Cucurbita maxima]	[more]
XP_038894780.1	5.4e-61	75.16	uncharacterized protein LOC120083201 [Benincasa hispida]	[more]
KAG6584232.1	1.2e-60	77.78	hypothetical protein SDJN03_20164, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0006170 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0006170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ED51	2.4e-62	79.08	uncharacterized protein LOC111431456 OS=Cucurbita moschata OX=3662 GN=LOC1114314...	[more]
A0A6J1KJ01	4.0e-62	78.43	uncharacterized protein LOC111495035 OS=Cucurbita maxima OX=3661 GN=LOC111495035...	[more]
A0A5A7ULQ3	7.6e-61	77.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1GSC5	2.9e-60	74.84	uncharacterized protein LOC111457052 OS=Cucurbita moschata OX=3662 GN=LOC1114570...	[more]
A0A5D3BLD0	6.5e-60	77.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0006170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62865.1	1.3e-20	45.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G48020.1	2.1e-18	41.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G01430.1	6.0e-18	35.29	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT5G14890.1	3.0e-17	39.72	NHL domain-containing protein	[more]
AT5G25240.1	1.8e-09	37.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076:SF9	BNAA06G16930D PROTEIN	coord: 15..146
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 15..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006170.1	Sed0006170.1	mRNA