Sed0006131 (gene) Chayote v1

Overview


Name	Sed0006131
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Gag/pol protein
Location	LG02: 11083915 .. 11096677 (+)
RNA-Seq Expression	Sed0006131
Synteny	Sed0006131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACTGATAAATTAACTGGAGAAAACTATACTACATGGAAAAACAATATCGACACGATTCTTGTCGTCGATGACAAGAAGTTTGTTCTCACGGAGGAATGTCCTCTATCACTGGTACAGAATGCGGCATGAAATTTTCGTGAGGCACATGACCGTTGGCAGAATTATAACGTAAAGGCAAGGGTCTATATCTTGGCAAGTGTCTCGAACATTCTAGCCAAGAAACTAGAGAACATGGTAACTGCTTATAACGGCCCAGGTTTTCATCCCGGTCCTCCAGGTATGTCCTAAGGGTATTTTGGTAATTTGGTCGGGCCATTTTTGTCTTCTCAGCTGTTTATATTCTTGGATGTTCAAAATTAGGGTTTGGTTGCATTCTGGTTGAGTTTGGGTGTTGAGAGTTGCAAAAATAAAATAAGGGGTTTTGGCAGAAAATAGATGTAGTAGCTGAGGCTTGAGCCAAGGTGGCTGGGAAGATAGCAGTGAGGTTTTGTGTAATAGCCCGGAATTTCATCCCGGTCGTCCCGGTTTGCCCCATGGGCATTTTGGTAATTTGGTCGGGCTGACAGGGCCGGTTATGTCTTTTCCAATTGCCAAAAAATATTGAGATGATTTGAATAGGTTCGGGAAGCTTTGGGCTTGGTAAAAGGTAAAAAGAAATAGGAAATTAAATAGCACGTCGAGTGAGATTCGAACCAAGGTCGCTTAGGAAGATAGACGGGTGGCATTGCCACTTGAGCCACCGGGCGTCTTTGTTAACTTAAACGCGCCATCTAATTGTTAAGCGTGTCTTCGTGCGTTTGGTTTTAAAACAACCCGCCCGAGTCTTCTTCTTCCCCATTTCTTCTCCTTTCTTCTTCATGATTCTTCTCCGACCGACAGCGAATTCTTCCTCGCGATTTCTCCCTCACCGACCTCAATTCGACCGAGCTTCTTCCCCAAATTCAAGTCGATTTTCATCCCGAGCAGCAGGTGAGCTTTCTTCCTTCTCCTTCTTCTTCTTCCCCTTCAATTCGATTCCCCTATTTCTGATTTCCACTTTCCGGCCGAGTCGAGGTGAGTTGCTGGATGGTTTTTGTGCAGCTTGTGTAGGGGAGTTCAACCAACAACCAATCGCTCGTCGAATCTCGTCAAATCGCCCGAATTCGAGTTCCTTCTCCAATCGCCGTGTTCGCCCCGCCAGCTTGTGAGCAGCCCAATGCCGTGTCGCGCTCGCGCCAGTGTAGCGCGTCCTTGCTTCTAGCCGATCGCTAAGCTTGTGTCACACGCCCGCGCGCGCGTTCTGCGTGACTAACACCCTCACTCGCGCGACCCAGCGCGCCACGGGCTGACCCTGCGCCCGTGGCGCCCAACTAACCCTATTGCTGCCTCGTTCGTGTGTCCGCTGCGCCTCGTGAGTTGCTCCCGAGCCGAGCCCTGTTTATTTTATTGTATTTAGGCCTATTGTGTGATTAATTGTTGTGATTGATAGGTTCCGGTAGCTAGTTCGGGTTCGTTCGTAGCTTAGGTTTTTGTGTAATCGTCCCCGACCAAGGTAAGGATTTCTTATCGGAGTTGTGTGGACCCTGCGATATTATATGTGATTGCTGATTGATTGCTTGTTTGTGTTTATTGACATGTGTAGCTAAGTGCTCTATTCTGAATTCCCGATTGACATGATTTTCATGGTTAATTCTCATGTTAATCCATGCTAGGTTGTTCCTTTCTGGCATGCTCGTATCTGTTCTTGCTTCGTAGTATCATGCTAGGTTCGTTGCATTCTTATTGAGCACGTATTGGATTTTACTGAATTGTTTGCTGCTTGCTAAGGCAGGTTAGAGTGGCAGGTAGATAGCATCATCCGGGCCGGGTGCATAACGAACCTTGCATCCACAGACAGGACGTCACGAGATGGAGCTCGCCCGATCCCGTTGGGAATAGCTAACCCTAACTACCGCCCCGCAATCTTGGGTGAGGGTGGCGATCGTTAAATGCCCCAACGGTCGGGATGATGACTTGGCATTGCCTCGTCCCCGGCAGCCGGCATGTCCTCAGCATGTTTGGAAGTAGCCCCTGATTGCCACCTGTTAAGGTAAGGACGGCTTCCTGGTGTAAGGCTACCACGACCCGTTCCTTAGCCTCAGGTGCGGTGGTTCAGGCTGACATAGTTTACGTGTCCACGTCTCACACCCCTATGTCAGTGATACCGATCCAGAGATTTAGTTAGGCGTGGTGACTGGACATGGGCAGCTTGCCACTAGACCCGGCACCCCCCATGGTCTGCAGTAGCACGCGGTACATGCTTACGCTCATTACAGCGCCGACTGGAGAGCTCCTCGGGATTGTGAGCCAGTGTACCTTTCGTCGATGTGAGAGCAGCCGAGGCCGGACTTGTTTCTCGTATAGGCGACTTGTGTGGTGATATCATTCCGGACTAAGACCCTGAGTTGGCATCCGAGGCCCAAGTGTGGGCTAAGCTATGTGCTATATTCTGTGTTTTTACTCATAGCTTGCATACACTCATCGAGATGACCATGTATATCGTATTGTACCCCGGTTGGGGATTCTTACTGAGTAATTCGTTACTCACCCTTATTATTGTGGTTTTCCACAGGTAACCGAAGTTGCGAGACAGGATGGTGAAAGGAGGAGCTGTGATCATGGGGCCAGATCATCAAACTACGATTTTGTGTTATGACTCTTTATGTTTTATTTTCCCCTGAATGCATGTAGCCGGGCACGGAGCCCTAGGATGTTTTCTAAATGTTTTGTGGATTCCAGCATTGTTGTATCTGGACAGGTTTTGAAGGATTTTAATAAATCTCTGATCAGAGTAAACTTTGGAAATGTATTTATCTTGGAACAGGTCTTGGAAACAGGGGATGAGTTTCGGGAAAATTGTCCGGGCTTTGAACTGAATGTTTGAATGTTTTGTTTTTAATTGGAATCCGAAATCATGTTTGTATAATGTCCTTTACTTTGAATGCATGCATTGGGGGTAAGGGCCCATTTAGTGCCCCATTCGGGTCGGGTCTTTACAGTTGGTATCAGAGCTTAAAGTCATAGATTCTGTAGATTGACCTTTTGTTGTAGGTCATTTTCCCATGATCACCAGCACTCCGACAGTTATCAGGTACGCCTAGTTTACTATTTGTTGTAGAAAAAGGGTTAAGAATTTACAATACCTGTCATCTAGTGTATGCCTTGTGTAGTGCTGTGGAGCTGAGACGAGTAGGTTCTGACTCGTTAGTGGTTTGGGTTTAGAGCGCCATCATGCCAACTTCCCGCAGTGTGTGATGTATGTTGTGGCTTGTTGAGGTATCCAGATAGATTCGGATTCCCTGGGACGTCGTTCCAGAGGAAGGCAGAGGTTAGACTCCCTTAGGCCACTTGTGTCCCAGTTGTTGGTTTTCCCCTAGTGAGAGGGTGGAGGTGCTTTGCCTGGGAGTACTACTCCAAGATAGGAGTTAGCTATGGTTGTGCTTATGTGGATGCTTGTGGAGCAGGTCCCCTTGTGGACTAGCCTGGGTAGCTCAAGTGTTGATCTTGAGCCTTAGCAGATTGTTTGATTGCCTAGAGAGTGGCTGCAGAGTTGGTAGCATTCGAGGAGGTTGATGAGGCATCTTTGTGCTCCTGTAAAGTGTTGTTGTTTGCAGCCAGTAAGCCGGAACCCTGTGGTTAAGGGTGCAGCAAGCAGTGTTCCCTTCGGACTGGATCCGTTGGTGGTTTCCTCAGTTGTTTGATAGAGACGAACACTCTTCTTTTGGTAAGCCCCTGGAGTAGGGCTAGCTGCTGCATGTTGAGAGAGCCGGCCAGAGTTTGTTGAGCATCATGTGGAGATGCAAGAGTAGGTTGTGAGCCTTCAGCTTGATGAGATGCCTTAGGCATGGTTGTTGGAGTTGAGCCCTTGTATGCCTAGCCAGAGTTCGTGTCACTTGAGGTTGTGACCTTGTTGGCCCCGTTGTAGTAAGATGTGGATTTGGTAGTAGTGGCACTTGAGGTGCATTGGTTGGTGTGCCGCTTTGGCACTAAGTCTGGTTCAGGCCTGAGTTTGGCATGGGCATAGCAGATGGTTCTATGCCGTCCGGAGTTCAGCGCACTCCTTTAGCCTTGGATCCTTTTGTGGCAGTTGCACCTGTTTGGGTCGTGCAAGAGAACTAGTTCAGTGGTAGTCGTAGGACTACAAGAGAAAGGATGTTCGAGAGGAGCCGGAGCCTTTTTCCAGTGTTACCGGAGGTTGAGTAAGTCAGCAGGTTGTCGGTTGGTAAGTGTTAGTGCGCGTGCATCTCACGCTACTGTTAAGGCCAAGAGATCATTGTGGTTGGTAGTGCGGTCAACTACCTTCGAGTGCCTAAATCTGAGGAGAGTTGAGCATCGTAGAAGCAAGTTTGGGTCCAGCTGAGGGACCATGAGTTGGATGCCTATGAGGTGAGTAGGATGCCTTGTGAAAGGAGTTGGATGCCTTATGGGTAAGCACCCTTGGTAGAGGCATGGTATAAAGTAAGTTCGGTTTGACATGGTTATGCTTTGGTAGTGCAAGGTTGCCACAGCTTCGAGCATCGTGTGGAGATGGAACTTTGGGTGTTCCGTTGATTGATTGTATCTCTGCCAGGAGCTAGTGTTGCTTTTGGGAAAAGCATTTGTTAGTCTTGGATCTCTAAATGAAGGTTGGGAGTTGTGCACACAAGTGTGTTTTGTGTGGTTCGTTCTGTGGCGAGAGTTTCAGATCCATGTAGGGTTTGCTTTGGGGATCTGGTGCTCAGTTCTTGGAGAAGTTGGACTCCAGGTGGATGTTGTAAGGCTTTAGCGAGGTGGTAAGGATACCATGCTCGTGGTATCAGGTTGTTGCTTAGGTAAGATTTGTTAAGTTGGACCTAAGCTTGGTTGGCGGATCTTCTTGTTGATCGTCATGACTGAGAGAGTTGTTCGGATCCTTCCTTGGGTAGAAGTTATGTTGTGGTTGACGTCTGAGTAGGAGGATGACGTATTCGGTAGTGTTTCGGGTCCTCTTGGTTTCCAAGGAGTTGGAGTTGACCAGCATGGTTATGATGCTGAGAAAATGGAGTTGTTGTTTGTTCAGGCAGTTGGCTGTTAGTCCGTTAGTTGGCAGTGGGTGTCGAGGGTTGTCGGAGAACCCTAGGTTGTGGAGAGCCTCTCTAGAGCTCAGTCAGGCCTAGGTAGTGAGTTTCAGTTGGCAAGCTGGAGCTGTGTAGTTTGTAGCCTCGGGTGAGTTGCCGGCAGTCTTGGTAGCCTAGCAAGCTAGTATTTGTTTGGAGTAGAGTCCGGATTGGTCCCGGTGTGGTGACAAGTTGATGCTTGGTGTTGACCAAGGTGTGGATTGGAATTGTTAGGAGTTAGTTTTGCTCGTGGGGCGAATGGTTCGTGCCCTGTTGGTTGTCTTCCTGTTTCCGGGAAAGTTGGGAGTTGCCCCGTTGGTACTTGGAGGTTCAGTCCGTGGTGGACCCCTATTGCTACCTCGTGAGATTTAGATCTTGTTACTTTAGTGGAGCAAGACAGTGAGTGTATGTAGAGCTCTCTGTCCTTCGGTTGTTTGCTTGTAAGAGCCGTTTCTTTCTGGGTTTGGCAGGTTACTACCGTCGGTTTGTTAAGGACTTTTCCGCCATAGCCTCGCCCCTCACTCGTCTGACGAGGAAGGGTGTCGAGTTTATTTGGGACCATAAGTGTGATGAGAGCTTTGCCAGGCTCAAGCGCAGTTTGACTTCAACACCAGTGTTGGCAGTCCCGGAAGGGACAGGTGGTTTCGTGGTCTACAGTGATGCTTCCAAGTTCGAGTTAGGTTGTGTGTTGATGCAGCACGGGAAGGTCATTGCTTATGCTTCCCGCCAGCTGAAGCCATATGAGCAGAACTATCCGACTCATGATATGGAGTTGGCAAAGAGTGGTGTTTGCACCGAAAAACTGGAGGCATTACCGTATGGTGAGCGGATTGAGATGTTTACCGATCACCAAATCCTCAAGTATCTCATTTACTCGTAAAGAGTTGAATATGAGGCAAAGGAGATGGTTAGAGTTGGTAAAAGATTATGATCATGCGAGATTTTGTACCATCCGGTAAAGCCAATGTTGTAGCTGATGCTTTGAGTAGGAAGACGTCGCACTCCGCGGTGTTGTTGAGTTCCCAGCCCAGATTGCGGAGAGAGTTCGAGCGGGCTGAGGTTGCAGTGTTGTTGGGTGAGGTTGCTGCCAAAGTAGCTCAGTTGACAGTTCAGCCATCGATCAGGCAGCGTATTATCGATAGCCAGCTGAGCGACCCCGCTCTTAAGAGATTGTTTGACAGAGTTAGTGCTGACAGAGATTTTGACTTCGTTTATTCACCAGACAGTGGGCTGACGTACAAAGGGCGGTTGTGTGTTCCGGATGTGGCAGGATTGCGAGCAAAGTTGCTCTCTGAGGCCCACAATTCTTCGTTTGCTTGGCACCCCGGGGGTACCAAGATGTATCAGAACCTTAAGCAGACATTCTGGTGGATGGGTATGAAAAGAGATGTTGCGGAGTTTGTCAGTCGGTGTCTCACTTGTCAGCAAGTGAAGGCGCCAGCAGAGACGGTGGTTTGTTGCGGCCTACCGAGTGTGCCCAGTGGAAATGGGAAGAGATCTCCATGGACTTTATTTCTGGTTTGCCGAGAACTCCGAGGAAGTTCTCTCAGATTTGGGTGATAGTCGACCGATTGACTAAGAGCGCACACTTCATTCCCGGTAGAGACACTTATACCGTGGAACAGTGAAGCGCGAGCTTGTTTTGGAGCAGATCATTCGTTATCACGGTGTGCTCAGAGGATTGTGTCCGACCGTGATTCGAGGTTCACTTCTCGTTCGGAGAGCGCCCGAAGGGTTTAGGCATCGAGTGCGCCAAAGATGACTTTTCACCCCTCGGTGATGGATGCATCGAGAGGGTGAACCGCATTCTCGAGGATATGTTGAGGGCTTGTGTGTTTGATTTCCCGGCGATTGGGACCGAGATTCAGATTCGATGGAGTTTGCCTATAACAACAGTTATCAGTCGACGATTCAGATGGCTCCATTCGAGGCTTTGTATGGTAAGCGTTGCCGATCTCCTATGTTCTGGGAAGAAGTTGGTGATAGACAGGTTTTGGGTCCCGAGTTGCTGCAGTTGACTAATGGTGCCGTGCAGAAGATTAGAGCTCGCATGTTGACAGCTTAGAGCAGGCAGAAGAGTTACGCCGATGTGCGGCGTCGGGATTTGGAATTTGAGGTTGGACAGCATGTATTCCTAAAGGTTGCACCGATGCGAGGTGTTTTGAGGTTTGGCAAGCGTGGAAAGCTGAGTCCCCGTTTTGTTGGTCCGTTTGAGATTCTGGAGAGGATTGGCAAGGTTGCTTATCGATTAGCCTTGCCTCCGTCATTGTAAGCGGTACACGGTGTTTTTCATGTTTCGATGTTGAGACAGTATGTGCCAGACCCGTCACACATCGTGGATTTTGAGCCTTTGCAGCTGAATGAAGATTTGAGCTTCGAGGAGAAGCCAGTGGGGATCCTTGCCTTTGAGACAAAGACGTTGCGTAACCGTGAGATCCGTTTGGTAAAGGTTCAGTGGAGGAGTCAGAGTTCAGAGGAAGCCACTTGGGAGCGGGAAGATGAGATGAGGTTGCTCTATCCCGAGCTGTTCCAGTCTTAAGGACTTTCGAAGACGAAAGTCATAAAAAGGGGGGAATATTGTAACAGCCCGGAATTTCATCCCGGTCGTCCCGGTTTGCCCCAGGGGCATTTTGGTAATTTGGTCGGGCCGACAGGGCCGGTTATGTCTTTTCCAATTGCCAAAAAATATTGAGATGATTTGAATAGGTTCGGGAAGCTTTGTGAAGGTATTTGGGCTTGGTAAAAGGTAAAAAGAAATAGGAAATTAAATAGCGCGTCGAGTGAGATTCGAACCAGGGCCGCTTAGGAAGCTAGACGGGTGGCATTGCCACTTGAGCCACCGAGCGTCTTTGTTAATTTAAACGCGCCATCTAATTGTTAAGCGTGTCTTCGTGCGTTTGGTTTTAAAACAACCCGCCCGAGTCTTCTTCTTCCCCATTTCTTCTCCTTTCTTCTTCGCGATTCTTCTCCGACCGACAGCGAATTCTTCCTCGCAATTTCTCCCTCGCCGACCTCAATTCGACCGAGCTTCTTCCCCAAATTCAAGTCGATTTTCATCCCGAGCAGCAGGTGAGCTTCCTTCCTTCTCCTTCTTCTTCTTCCCCTTCAATCCGATTCCCCTGTTTCCGATTTCCACTTTCCGGCCGAGTCGAGGTGAGTTGCTGGGTGGTTTTTGTGCAGCTTGTGTAGGGGAGTTCAACCAACAACCAATCGCTCGTCGAATCTCGTCAAATCGCCCGAATTCGAGTTCCTTCTCCAATCGCCGTGTTCGCCCCTCGCCGCGCGCAGAAGCAGCCCCAGCGAAGTGTCGCTCGCGCCAGCGCGCGCGTCCTCGCTGAGCCGTATCGCCAGGCTCGTGTCACACCGCGCGCCCGTCCGCGCGCAGCCAGCGCCCTCACTCGCGCAGCCAGCGCGCCCACGGGCCCAGCCCTGCGCCCCAACGCGCCCAGCTAGCCCTATTGCTGCCTCGTTCGTGCAATCGACTCGTTCGTGTGTCCGCTGCGCCTCGTGAGTTGCTCCCGAGCCGAGCCCTGTTTATTTTATTGTATTTAGGCCTATTGTGTGATTAATTGTTGTGATTGATAGGTTCTCGGTAGCTAGTTCGGGTTCGTTCGTAGCTTAGGTTTTCGTGTAATCGTCCCCGACCAAGGTAAGGATTTCTTACCGGAGTTGTGTGGACCCTGCGATATTATATGTGATTGCTGATTGATTGCTTGTTTGTGTTTATTGACATGTGTAGCTAAGTGCTCTATTCTGAATTCCCGATTGACATGATTTTCATGGTTAATTCTCATGTTAATCCATGCTAGGTTGTTCCTTTCTAGCATGCTCGTATCTGTTCTTGCTTCGTAGTATCATGCTAGGTTCGTTGCATTCTTATTGAGCACGTATTGGATTTTACTGAATTGTTTGCTGCTTGCTAAGGCAGGTTAGAGTGGCAGGTAGATAGCATCATCCGGGCCGGGTGCATAACGAACCTTGCATCCACAGCATGGGGCACGAGATGGAGCTCGCCCGATCCCGTTAGGGGAATAGCTAACCCTAACGGTGGCCCCGCAATCTTGGGTGAGGGTGGTCGATCGTTAAATGCCCCAACGGTCGGGATGATGACTTGGCATTGCCTCGTCCCCGGCAGCCGGCATGTCCTCAGCATGTTTGGCAGTAGCCCCTGATTGCCACCTGTTAAGGTAAGGACGACTTCCTGGTGTAAGCCTACCATGACCCGTTCCTTAGCCTCAGGTGCGGTGGTTCAGGCTGACATAGTTTACGTGTCCAGGTCTCACACCCCTATGTCAGTGATACCGATCCAGAGATTTAGTTAGGCGTGGTGACTGGACATGGGCAGCTTGCCACTAGACCCGGCACCCCCCATGGTCTGCAGTAGCACGCGGTACATGCTTACGCTCATTACAGCGCCGACTGGAGAGCTCCTCGGGATTGTGAGCCAATGTACCTTTCTTCGACAGTAGACAGGCTGAGGCCAGGACTTGTTTCTCGTATAGGGCGACTTGTGTGGTGATATCATTCCGGACTAAGACCCTGAGTTGGCATCCGAGGCCCAAGTGTGGGCTAAGCTATGTGCTCTATTCTGTGTTTTTACTCATAGCTTCCATACACTCATCGAGATGACCATGTATATCATATTGTACCCCGGTTGGGGATTCTTACCGAGTAATTCGTTACTCACCCTTATTATTGTGGTTTTCCACAGGTAACCGAGTTGCGAGGTAGAGGATGGTCAAGGAGGAGCCGTGATCATGGGGCCCACCATCAAACTCTGATTTTGTGTTATGACTCTTTATGTTTTATTTTCCCCTGAATGCATGTAGCCGGGCACGGAGCCCTAGGATGTTTTCTAAATGTTTTGTGGATTCCAGCATTGTTGTATCTGGACAGGTTTTGAAGGATTTTAATAAATCTCTGATCAGAGTAAACTTTGGAAATGTATTTATCTTGGAACAGGTGCTTGGAAACAAGGACAGGTTTCAGGAAAATTGTCCGGGCTTTGAACTGAATGTTTGAATGTTTTGTTTTTTAATTGGAATCCGAAATCATGTTTGTATAATGTCCTTTACTTTGAATGCATGCATTGGGGTAAGGGCCCATTTAGTACCCCATTCGGGTCGGGTCTTTACATTTTTCTAGTCAAGCTATAGGTAGTTTTTGATACTCATTCCGCAGGTTATCTTGGTTTGCCTTGGTTTTCGTGACTTCAGTGAGTTTGATTAAAAATAGGTTTTATTCTCCTTCTCCTTCCCAAACTCCTTGCAGCAAATCCTTTCCTCCAAGCTCACCGTGCCTTGTGATTTCCAGCCTCCCGAGAGCTTTGATCGATCGTTTTGGGTAAGTGTTTCTTTGTGCTTCGATTTCCTCCTCTTGTTGTTGTTGCCGATCTATTGGCTAAGGGCTTTGTTTGTTGTTCTTGCTGGCCGAGAGAAGGGGAAAAGTGATTGTGGTTGTGTGTGTTTGTTGTTGTGGTTGCAGCCGAGAGCAGCCCCTTTGCAGCCGTATTGTCAATCGCCCCATTGCCCTTGCAGCCGCACGTCGCCGCCCAGCCGAGAGCAGCCCTGTCGCGATCGTAGACCAACAGCCGCACTACAGACCCTCGCCGCGACCGAAGTCGCGATCGCCTCGAAGTCGCCAGATCGCCCGGCCGCCCTCGCAATCGCGCGCGCTGATCGCGACCCGCGGCCCGCCGCTCGCGCGCCGCGCGCGCGCGAACCGCTTCTCCTTCGCTGTTCGCTACCCAGCCGCACAACAACGCAACCATCTCCCCGTTCGCTCGCACGCCCAGCTGCACGTCGTCGAGCCGTGTGCCTTGCAGCCTGTCCGTCTGCGTGCCAGCTCCTTGCCGAGTGCCTTGCAGTCGAGATGCCATTGGTGTTTGGCCGAGCTGAGCTTCTGTTTTACTTTATTTAGAGTCTATAGTTAGTGATGTATTTGCTATTTGTTTGTTAGGGTTCCATTAGCTAGCTCGAGTTTGTTTGTAGCTCGAGAGTCCCCTTGTGTGCTTGTTAGCCTTCCGATTCAGGTAAGGATTTCTTATCGAAGTTGTGTGGGCCCTGCGTTACTTCTATGATTGTTGATTGTATGCCTGTTTATGTTTACCAGCATGTTAGGTTATAGGTACTTTGTTCTGAATTTCGACTGGCATGATTCTCGTGTTTATTCTCATGTTAGTTTCATGTTAGGTTGCTCTGTTCTGGCATGTTCGTAATTTGTTCTTGTTTCGTAGTACCATGCTAGGTTCTTTGTTTCTGCTGAGCATGTGTTAAGTATGATTTCTGTAGCTGTTTATAGTATAGTGTTCTAATAGGTAGCATCATCTAGGCGAGGATGCATAACGTAACTTGCATCCGTGGCAGGGACGTGCGAGGCAGTACTCCATCCCTGATCCGTCGTTAGGGTTTAGCTAACCTTAACGGCAGCCCAATGCAATCTTGGGTGAGGGTGGCAAACTATTAAATGCCCCAACGACTGGGGGAAATGACGAGGCATTGCTTGTCCCCAGGCAGTCGACACGACCTCAGCGTGTCGGTAGTAGCCCTTGATTGCCACCTGATAGGGAAAGGGCCGGTTCCTGGTGTAAGCCTACCACGGACAGTTTCTTAGCCTCAGGTGCGGTGGTACAGGCTGACATAGTCACAGTGTCCCGGTCTCACACCACTATGTTCAGTGACACCGATCCAGAGATTCTTTTAGGCATGCGTACTAGACCAAGACAAAGATGCCCTAGACCCAAACACCTCCACGGTTTTTGCAAAGCATGCGGTGCGCGCGCACGCTCAATACAGCGTCGACTGGAGAGCTCCTCGGGATCTTGAGCTCAGTGCACCTTTCGTATCGATAGTAGTAGGAAAGTTGAGGCCGAGACTAGTTTCTCGTAGAGTACCGAGATTCGTTGTAGTTTCTGGAGTAAGACCGTAAGATGGCATCCGTGGTATTTATGTCTGGATTAAAGTGATGTGCTCTCTTCTGTTTTTGTATTCATAGCTTGCATACGTTCTGCTAGATGACCAGTTGTATCGTATTGTACCCCGGTTGGGGATTCTTGCTGAGTAATTCGTTACTCACCCTTATTTATGTGGTTTCCACAAGTAACCAGGGTGCGAGACAGGATGGCTGAAGGAGGAGCTGCTGATCATGGAAACCTGTTGTCTTTTCAACTCTGAGTTTATGTTTATGTTTATGTTTTGTCCTCTGAATGCATGTAGTTGGGCACGGAGCCCTTAGGATGTTTTCTGATTGTTTCTGGATTCTGGCTTGTTAATAAACTGTTTGGAACTGAATGTTTTTGAAATAAATCTCTGATCAGAGTATGTTTTAAACTGCTTTTAGCTTGGAACAAGTGCTTGGAAATAGGGACAGGTTTCAGGACGATTTATAACTGATTACTTCATGAATGTTTACAAGTTTTATTTCTCATTCAGAATCTGGATAACAATCTTGCATATTATATTTAAATTTTAAAAGCATGCATTGAGGTAAAAGCCTAGGTTAGGACCTCTTTTGGGTTAGGTCTTTACACTGCTTTAGAGATGATGAAAGCCCTTCATGAGATGTTTGGGCAACCATCATCTCAGGTAAAACATGATGCTCTCTTGGTCATTCATGGTGCTAAGATGAAGTCAGGAATGTCAGTAATGGAGCATGTCTTCAGATGA

mRNA sequence

ATGTCAACTGATAAATTAACTGGAGAAAACTATACTACATGGAAAAACAATATCGACACGATTCTTGTCGTCGATGACAAGAAGTTTGTTCTCACGGAGGAATGTCCTCTATCACTGGCACATGACCGTTGGCAGAATTATAACGTAAAGGCAAGGGTCTATATCTTGGCAAGTGTCTCGAACATTCTAGCCAAGAAACTAGAGAACATGATGATGAAAGCCCTTCATGAGATGTTTGGGCAACCATCATCTCAGGTAAAACATGATGCTCTCTTGGTCATTCATGGTGCTAAGATGAAGTCAGGAATGTCAGTAATGGAGCATGTCTTCAGATGA

Coding sequence (CDS)

ATGTCAACTGATAAATTAACTGGAGAAAACTATACTACATGGAAAAACAATATCGACACGATTCTTGTCGTCGATGACAAGAAGTTTGTTCTCACGGAGGAATGTCCTCTATCACTGGCACATGACCGTTGGCAGAATTATAACGTAAAGGCAAGGGTCTATATCTTGGCAAGTGTCTCGAACATTCTAGCCAAGAAACTAGAGAACATGATGATGAAAGCCCTTCATGAGATGTTTGGGCAACCATCATCTCAGGTAAAACATGATGCTCTCTTGGTCATTCATGGTGCTAAGATGAAGTCAGGAATGTCAGTAATGGAGCATGTCTTCAGATGA

Protein sequence

MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECPLSLAHDRWQNYNVKARVYILASVSNILAKKLENMMMKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSVMEHVFR

Homology

[Close]

BLAST of Sed0006131 vs. NCBI nr
Match: XP_022158791.1 (uncharacterized protein LOC111025258 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 1.0e-24
Identity = 62/124 (50.00%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 1   MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECPLSL----------AHDRWQNYNVK 60
           +++DKL G+NY  WK+N++TILV+DD +FVLTEECP +L          AHDRW   N K
Sbjct: 9   LASDKLNGDNYGIWKSNLNTILVIDDLRFVLTEECPPALAPNSNQTVRDAHDRWFKANEK 68

Query: 61  ARVYILASVSNILAKKLENM-----MMKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSV 110
           ARVYILAS+S++L+KK E +     +M +L  +FGQPS+ + HDA+  ++  +MK G SV
Sbjct: 69  ARVYILASISDVLSKKHEGLATAREIMDSLQALFGQPSTSIIHDAIKYVYNCRMKEGSSV 128

[Close]

BLAST of Sed0006131 vs. NCBI nr
Match: XP_022152352.1 (uncharacterized protein LOC111020095 [Momordica charantia])

HSP 1 Score: 120.9 bits (302), Expect = 6.8e-24
Identity = 62/124 (50.00%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 1   MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECP----------LSLAHDRWQNYNVK 60
           ++  +L GENY  WK+N++TILV+DD KFVL E+CP          + +A+DRW   N K
Sbjct: 9   LAAQRLNGENYKQWKSNLNTILVIDDLKFVLQEDCPQASAPNATVAVRIAYDRWIKANDK 68

Query: 61  ARVYILASVSNILAKKLENM-----MMKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSV 110
           A+VYILAS+S++LAKK E+      +M +L  MFGQPSSQ +H+AL  I+ ++MK G SV
Sbjct: 69  AKVYILASISDVLAKKHEDTITAKEIMDSLQSMFGQPSSQARHEALKFIYNSRMKEGSSV 128

[Close]

BLAST of Sed0006131 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 8.8e-24
Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 1   MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECPLSLA----------HDRWQNYNVK 60
           ++ DKL G NY +WKN I+T+L++DD +FVL EECP   A          ++RW   N K
Sbjct: 9   LAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEK 68

Query: 61  ARVYILASVSNILAKKLENMM-----MKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSV 110
           AR YILAS+S +LAKK E+M+     M +L EMFGQ S Q+KHDAL  I+ A+M  G SV
Sbjct: 69  ARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASV 128

[Close]

BLAST of Sed0006131 vs. NCBI nr
Match: TYK07761.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 8.8e-24
Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 1   MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECPLSLA----------HDRWQNYNVK 60
           ++ DKL G NY +WKN I+T+L++DD +FVL EECP   A          ++RW   N K
Sbjct: 9   LAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEK 68

Query: 61  ARVYILASVSNILAKKLENMM-----MKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSV 110
           AR YILAS+S +LAKK E+M+     M +L EMFGQ S Q+KHDAL  I+ A+M  G SV
Sbjct: 69  ARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASV 128

[Close]

BLAST of Sed0006131 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 8.8e-24
Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 1   MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECPLSLA----------HDRWQNYNVK 60
           ++ DKL G NY +WKN I+T+L++DD +FVL EECP   A          ++RW   N K
Sbjct: 9   LAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEK 68

Query: 61  ARVYILASVSNILAKKLENMM-----MKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSV 110
           AR YILAS+S +LAKK E+M+     M +L EMFGQ S Q+KHDAL  I+ A+M  G SV
Sbjct: 69  ARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASV 128

[Close]

BLAST of Sed0006131 vs. ExPASy TrEMBL
Match: A0A6J1E205 (uncharacterized protein LOC111025258 OS=Momordica charantia OX=3673 GN=LOC111025258 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.1e-25
Identity = 62/124 (50.00%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 1   MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECPLSL----------AHDRWQNYNVK 60
           +++DKL G+NY  WK+N++TILV+DD +FVLTEECP +L          AHDRW   N K
Sbjct: 9   LASDKLNGDNYGIWKSNLNTILVIDDLRFVLTEECPPALAPNSNQTVRDAHDRWFKANEK 68

Query: 61  ARVYILASVSNILAKKLENM-----MMKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSV 110
           ARVYILAS+S++L+KK E +     +M +L  +FGQPS+ + HDA+  ++  +MK G SV
Sbjct: 69  ARVYILASISDVLSKKHEGLATAREIMDSLQALFGQPSTSIIHDAIKYVYNCRMKEGSSV 128

[Close]

BLAST of Sed0006131 vs. ExPASy TrEMBL
Match: A0A6J1DFZ2 (uncharacterized protein LOC111020095 OS=Momordica charantia OX=3673 GN=LOC111020095 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.3e-24
Identity = 62/124 (50.00%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 1   MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECP----------LSLAHDRWQNYNVK 60
           ++  +L GENY  WK+N++TILV+DD KFVL E+CP          + +A+DRW   N K
Sbjct: 9   LAAQRLNGENYKQWKSNLNTILVIDDLKFVLQEDCPQASAPNATVAVRIAYDRWIKANDK 68

Query: 61  ARVYILASVSNILAKKLENM-----MMKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSV 110
           A+VYILAS+S++LAKK E+      +M +L  MFGQPSSQ +H+AL  I+ ++MK G SV
Sbjct: 69  AKVYILASISDVLAKKHEDTITAKEIMDSLQSMFGQPSSQARHEALKFIYNSRMKEGSSV 128

[Close]

BLAST of Sed0006131 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.3e-24
Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 1   MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECPLSLA----------HDRWQNYNVK 60
           ++ DKL G NY +WKN I+T+L++DD +FVL EECP   A          ++RW   N K
Sbjct: 9   LAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEK 68

Query: 61  ARVYILASVSNILAKKLENMM-----MKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSV 110
           AR YILAS+S +LAKK E+M+     M +L EMFGQ S Q+KHDAL  I+ A+M  G SV
Sbjct: 69  ARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASV 128

[Close]

BLAST of Sed0006131 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.3e-24
Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 1   MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECPLSLA----------HDRWQNYNVK 60
           ++ DKL G NY +WKN I+T+L++DD +FVL EECP   A          ++RW   N K
Sbjct: 9   LAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEK 68

Query: 61  ARVYILASVSNILAKKLENMM-----MKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSV 110
           AR YILAS+S +LAKK E+M+     M +L EMFGQ S Q+KHDAL  I+ A+M  G SV
Sbjct: 69  ARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASV 128

[Close]

BLAST of Sed0006131 vs. ExPASy TrEMBL
Match: A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.3e-24
Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 1   MSTDKLTGENYTTWKNNIDTILVVDDKKFVLTEECPLSLA----------HDRWQNYNVK 60
           ++ DKL G NY +WKN I+T+L++DD +FVL EECP   A          ++RW   N K
Sbjct: 9   LAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEK 68

Query: 61  ARVYILASVSNILAKKLENMM-----MKALHEMFGQPSSQVKHDALLVIHGAKMKSGMSV 110
           AR YILAS+S +LAKK E+M+     M +L EMFGQ S Q+KHDAL  I+ A+M  G SV
Sbjct: 69  ARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASV 128

The following BLAST results are available for this feature:

BLAST of Sed0006131 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158791.1	1.0e-24	50.00	uncharacterized protein LOC111025258 [Momordica charantia]	[more]
XP_022152352.1	6.8e-24	50.00	uncharacterized protein LOC111020095 [Momordica charantia]	[more]
KAA0044955.1	8.8e-24	50.81	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK07761.1	8.8e-24	50.81	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	8.8e-24	50.81	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Sed0006131 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0006131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E205	5.1e-25	50.00	uncharacterized protein LOC111025258 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DFZ2	3.3e-24	50.00	uncharacterized protein LOC111020095 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5A7SMH8	4.3e-24	50.81	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	4.3e-24	50.81	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TU93	4.3e-24	50.81	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00259...	[more]

BLAST of Sed0006131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006131.1	Sed0006131.1	mRNA