Sed0006085 (gene) Chayote v1

Overview


Name	Sed0006085
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Location	LG05: 45075571 .. 45078913 (-)
RNA-Seq Expression	Sed0006085
Synteny	Sed0006085

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGAATACTTGAAATGTTAGGGTTCTTTATTTGAAAAAAAAAAAAATCAGCATTTTTAGTTTAAGGTTCGGAAACCGTAGCTCTGGTTGGCGATCTCTTTTTCTCCATCTGAATCAATGGCGTCGAGTCTGTTCAAAGCGATTGTTGAATCTTCCTTCAAATCTTCATCTTCTGTTAGGAATTTCAGTGTTGGCGCTACCAACCAAATCAGTCCGCACACCGCCAAATGGATGCAGGTAATCTCGCAAATCCCCCTTTCGTGCTTTCGTAATTTGAGTTCGTTTCTGCCGATTCTGCTTTCTCGTTTTGTAATCCGATCTTCTTTTCTTTAGTGCTCGATTCTCAAGCTTCCCAATTCATGTGGTGATTCGTTTCGTTTTTCCTTGTTTTTGTTTTCTCCAATCGATTCTTGTTATGTGGAAATTAAATTCATGTTTTTTGGAGAGAAGAGAAGACAAGACAAAAGAAAACCTCGATTTCTAGTGGCATTGATTGATGGCTAAACCTGGCTTTTGCTGTTCGTCTTTCATCAAAACAAAAGCTCTCTCCCTTTGTACTATGTCTTATCTTCTTCATGTTTGGTGGATTTTCTATGATTTTTAACAATTGCACCTCACCTCTAGAAATACTAGAGAGCTATTTATGTATATATCCTTTTTTCTTGATACCTACATGCTCACCCCCAATTTTTTCTTTTCACAAGAAATATAAACTTCTCATGTATATTGAAAAGTTACCAACTTTGTGAAGAATATACAAAAGTAGAAAATAAAACTTCTCTAGTTTGCTCACTTACTGCTGGAAGCCTAAAAATACCAAAGGGGAAATAGTTTTCATTTTTTTTTATTTGTGCGTGTGTGGGCCAGCTTACGTGCACCTCAAATACTCTCGTGAGACATATCAATCTGACCCTGTCATGAATATCAAGTTAGGGAAAACCGCTCACACAAATGGAAATTTAAAGTAACTGGCTTCACAAGCTGTTTTTCTTTGTATGCTTGTGTATTCTTTGTTCTTTTTTTTAATAAAAGCTGATCTTTTTTTTTATAAAAATAAATAAAGTATAAGTAGTAGGCATTTTAGACTCTCTATATCGTATGTATTATGTATGACTCTTGAGAAATAAGAATTTGTTACCAATTACTTGAGTATTTAAGCTAGCTTTGTTACTCTATTATCTCATGGGAAGGGATTTTTGTAACTATTGATAGTCTTTTGTTTGTAACTTTTCATTGTGAATGAAAGTTTTCCTGTTTCCTATAATAAAAAAACGTAGATGCACCGACATTTTCCGGATCCGGACCCTATAAAAGCAAGATTTGAGAACTTCTATGACTGTTGATATTGTTTACTAAGGACTTCCATGTCTTCTCAATTATTATTATTATTGTTTATAAGTAAACAGTTATTGTTAAGATACCTGAAAGAACAAAACAGAGGCCACGGAAAGAGACAGTTGGAGGCAAAAGGGAACTGACTACCAAAAGAGGTTACAATTATTAAGAACCAAAACTAATCGAAAGGATATGTACAAACTACAAACTAAATAGTGCAAGACACTCGTATAGAGTCATTGAAACAGTCCAATCCTCACTCCACCTCCTCCCAAGAATCTTTAACCATTATAAAAATTGTCCCATCTCTTTCAAATCCAATGTACCCCAAAATAGCTAAATAAGCTGCTTGTCTCAAAACCTTCACTTTACCACCAATGAAGGTGAAACGTGCAACTAATTTTCCTCCATCATTGAACAATAATCCTTGCATTGAACCAACCATCATGGGTTGCCCTTGTGGTAAGAGGGAATGGTTCAATTGCTGGTGGCGACCTACCTAGGATTTAATACTCTACACATTTCCTTGTCAACCAAATTTAGTAGGATTAGGCTGTTGTTCATGAGATTAGGTGCGGGTAAGCTGACCCAGAATAAAACTTAATCCAAAGAATGCAAGATTTACCATAAAAAGAACATTTATATATGGAAGGAACAAAAAAAATCAAACAAATTAATATCTATCAACACAACTAAAAACTCCATGTCAGATGTTGAGCAGAATGTCAATAAGATTGGGAAAGTCAACCAAGTGCACTTGAGCAGAATGTGAATAAGATTGGGAATGTTCTTTTAGATTAAAGAAGCGAAGTTTTGAAATGTTATGACACTTAAGTTTTAAGAAAATATCGGATGCATTGATGAAGACAAAATGGCTGTAGAGAAATATCTTTAATATACCATTCCAAGTCAGCAAAGATAGCAATGCTAGAAGTTTGGGCCCAGATGTTATCGATTGGAAGCTCTTTCATATAGATCTTTTGTGATGCTACAAATTATCAATTTAGTTCACGGACTATTTTGGTACCAAGGTAAACTGGATATTTCATATATTAGTTTCTCTTTCATGGTATTGTATACAATGATACTATCTAATAAATGGCTGTTTTTAGCATATGAACATTCCTTTTGGCTTGACTTAAGTTTTTCCCTTTTCATAATCAATACATTGTTTAACATTTTTGAATTTTGAATTTCTTTGGCATGACTTAAAAATATTTATCCTTTTGATGTCTGTTTCCTTAAATTATTGAATTTCAATAATACCCTCATGATATAGTTCTTTCACAATTTTGCCTTCCGTTATTGCTTTAATGCCAGATTGCTATTTGTTTTGTTTACTTCTAAGAAATATCCTATCATTTTTTGGTAGAATATTTGACTCTTTATGATCCTGTCCAATGCACAAGGATGCATATGAAAATTTTATTTTTATTTTCTTCTCTAGGATACAAGTAAAAAATCCCCCATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTTGAAGGCCGTATCGTTGCATGTGAGGGAGGTTAGTCCATCTCAATACATATCCACGCAGGCATATTTTTGAAGTAAACTTTTTAATCTGAACTTGGTGATTCCTTATTTGGATTCAAACTATTGTTGATTGCAGACAGCAATCCTGCCCTCGGGCACCCAATTGAGTTCATATGTCTTGATCGGGCGGAGCCCGCCATATGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAGAAATCTGCAAGTGATCATTCCAGCCAGCAACCCTCCACTTGGAAAGATAATTTCCCTACCTTTCCTAATTTAATTTCTGTAATGCTATGACTTGATGGTTATACTCCTGCCTGCATAAATAGGAATTTGAGGACTCCACTCACACACACTTTGGCTGGATTGTCTTTGCCAAATTTGTTTCATTGCTTAAAAGGATTTGTTTGTTGACCTATTTTGCTGACTCAAATGCCAATAAAAGGTTTTGATATCTTGGAGCTGCAA

mRNA sequence

TATGAATACTTGAAATGTTAGGGTTCTTTATTTGAAAAAAAAAAAAATCAGCATTTTTAGTTTAAGGTTCGGAAACCGTAGCTCTGGTTGGCGATCTCTTTTTCTCCATCTGAATCAATGGCGTCGAGTCTGTTCAAAGCGATTGTTGAATCTTCCTTCAAATCTTCATCTTCTGTTAGGAATTTCAGTGTTGGCGCTACCAACCAAATCAGTCCGCACACCGCCAAATGGATGCAGGATACAAGTAAAAAATCCCCCATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTTGAAGGCCGTATCGTTGCATGTGAGGGAGACAGCAATCCTGCCCTCGGGCACCCAATTGAGTTCATATGTCTTGATCGGGCGGAGCCCGCCATATGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAGAAATCTGCAAGTGATCATTCCAGCCAGCAACCCTCCACTTGGAAAGATAATTTCCCTACCTTTCCTAATTTAATTTCTGTAATGCTATGACTTGATGGTTATACTCCTGCCTGCATAAATAGGAATTTGAGGACTCCACTCACACACACTTTGGCTGGATTGTCTTTGCCAAATTTGTTTCATTGCTTAAAAGGATTTGTTTGTTGACCTATTTTGCTGACTCAAATGCCAATAAAAGGTTTTGATATCTTGGAGCTGCAA

Coding sequence (CDS)

ATGGCGTCGAGTCTGTTCAAAGCGATTGTTGAATCTTCCTTCAAATCTTCATCTTCTGTTAGGAATTTCAGTGTTGGCGCTACCAACCAAATCAGTCCGCACACCGCCAAATGGATGCAGGATACAAGTAAAAAATCCCCCATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTTGAAGGCCGTATCGTTGCATGTGAGGGAGACAGCAATCCTGCCCTCGGGCACCCAATTGAGTTCATATGTCTTGATCGGGCGGAGCCCGCCATATGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAG

Protein sequence

MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH

Homology

[Close]

BLAST of Sed0006085 vs. NCBI nr
Match: XP_022986645.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita maxima])

HSP 1 Score: 184.5 bits (467), Expect = 4.7e-43
Identity = 89/104 (85.58%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVE 60
           MASSLFKA+VESS K+ SS R+ S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVE
Sbjct: 1   MASSLFKALVESSSKTPSSARSLSL-VSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVE 60

Query: 61  GRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           GRIVACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQDHHH
Sbjct: 61  GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Sed0006085 vs. NCBI nr
Match: XP_038900460.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida])

HSP 1 Score: 184.1 bits (466), Expect = 6.1e-43
Identity = 90/104 (86.54%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVE 60
           MASSLFKA+VESS K  SS RN S+ A NQI  HTAKWMQDTSKKSPMELINEVPPIKVE
Sbjct: 1   MASSLFKALVESSSKIPSSARNLSLVA-NQIGQHTAKWMQDTSKKSPMELINEVPPIKVE 60

Query: 61  GRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           GRIVACEGD+NPALGHPIEFICLDR EPA+CKYCGLRYTQDHHH
Sbjct: 61  GRIVACEGDNNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Sed0006085 vs. NCBI nr
Match: XP_023511819.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6571206.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011009.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183.3 bits (464), Expect = 1.0e-42
Identity = 89/104 (85.58%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVE 60
           MASSLFKA+VESS K  SS R+ S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVE
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSL-VSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVE 60

Query: 61  GRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           GRIVACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQDHHH
Sbjct: 61  GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Sed0006085 vs. NCBI nr
Match: XP_022148513.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica charantia])

HSP 1 Score: 182.6 bits (462), Expect = 1.8e-42
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVE 60
           MAS+LFK I+ESS K  SS RN S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVE
Sbjct: 1   MASTLFKTIIESSSKFPSSARNLSL-VSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVE 60

Query: 61  GRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           GRI+ACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQDHHH
Sbjct: 61  GRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Sed0006085 vs. NCBI nr
Match: XP_022943963.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata])

HSP 1 Score: 181.8 bits (460), Expect = 3.0e-42
Identity = 88/104 (84.62%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVE 60
           MASSLFKA+VESS K  SS R+ S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVE
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSL-VSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVE 60

Query: 61  GRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           GRIVACEGDSNP LGHPIEFICLDR EPA+CKYCGLRYTQDHHH
Sbjct: 61  GRIVACEGDSNPGLGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Sed0006085 vs. ExPASy Swiss-Prot
Match: Q9M9M6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g03070 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.1e-38
Identity = 79/111 (71.17%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGAT-------NQISPHTAKWMQDTSKKSPMELINE 60
           MAS+L KA++ S    SS  RNFSV  T       + +  HTAKWMQD SKKSPMELI+E
Sbjct: 1   MASNLLKALIRSQILPSSR-RNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISE 60

Query: 61  VPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           VPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPAICKYCGLRY QDHHH
Sbjct: 61  VPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110

[Close]

BLAST of Sed0006085 vs. ExPASy TrEMBL
Match: A0A6J1JEL4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484323 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.3e-43
Identity = 89/104 (85.58%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVE 60
           MASSLFKA+VESS K+ SS R+ S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVE
Sbjct: 1   MASSLFKALVESSSKTPSSARSLSL-VSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVE 60

Query: 61  GRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           GRIVACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQDHHH
Sbjct: 61  GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Sed0006085 vs. ExPASy TrEMBL
Match: A0A6J1D4A8 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111017141 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 8.6e-43
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVE 60
           MAS+LFK I+ESS K  SS RN S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVE
Sbjct: 1   MASTLFKTIIESSSKFPSSARNLSL-VSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVE 60

Query: 61  GRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           GRI+ACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQDHHH
Sbjct: 61  GRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Sed0006085 vs. ExPASy TrEMBL
Match: A0A6J1FXJ3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111448533 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42
Identity = 88/104 (84.62%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVE 60
           MASSLFKA+VESS K  SS R+ S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVE
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSL-VSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVE 60

Query: 61  GRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           GRIVACEGDSNP LGHPIEFICLDR EPA+CKYCGLRYTQDHHH
Sbjct: 61  GRIVACEGDSNPGLGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Sed0006085 vs. ExPASy TrEMBL
Match: A0A1S3CI88 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501074 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42
Identity = 88/104 (84.62%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVE 60
           MASSLFK ++ESS    SS RN S+ A NQI  HTAKWMQDTSKKSPMELINEVPPIKVE
Sbjct: 1   MASSLFKLLLESSSNIPSSTRNLSLVA-NQIGQHTAKWMQDTSKKSPMELINEVPPIKVE 60

Query: 61  GRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           GRIVACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQDHHH
Sbjct: 61  GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Sed0006085 vs. ExPASy TrEMBL
Match: A0A0A0LNG2 (zf-CHCC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432800 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-40
Identity = 86/104 (82.69%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVE 60
           MASSLFK ++ESS    SS RN S+ A NQI  HTAKWMQDTSKKSPMELINEVPPIKV 
Sbjct: 1   MASSLFKVLLESSSNIPSSTRNLSLVA-NQIGQHTAKWMQDTSKKSPMELINEVPPIKVA 60

Query: 61  GRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           GRIVACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQ HHH
Sbjct: 61  GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH 103

[Close]

BLAST of Sed0006085 vs. TAIR 10
Match: AT3G03070.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 157.9 bits (398), Expect = 4.4e-39
Identity = 79/111 (71.17%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 1   MASSLFKAIVESSFKSSSSVRNFSVGAT-------NQISPHTAKWMQDTSKKSPMELINE 60
           MAS+L KA++ S    SS  RNFSV  T       + +  HTAKWMQD SKKSPMELI+E
Sbjct: 1   MASNLLKALIRSQILPSSR-RNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISE 60

Query: 61  VPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH 105
           VPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPAICKYCGLRY QDHHH
Sbjct: 61  VPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110

The following BLAST results are available for this feature:

BLAST of Sed0006085 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986645.1	4.7e-43	85.58	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita ...	[more]
XP_038900460.1	6.1e-43	86.54	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa ...	[more]
XP_023511819.1	1.0e-42	85.58	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucur...	[more]
XP_022148513.1	1.8e-42	83.65	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica ...	[more]
XP_022943963.1	3.0e-42	84.62	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita ...	[more]

BLAST of Sed0006085 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9M6	6.1e-38	71.17	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidop...	[more]

BLAST of Sed0006085 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEL4	2.3e-43	85.58	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbit...	[more]
A0A6J1D4A8	8.6e-43	83.65	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Momordic...	[more]
A0A6J1FXJ3	1.5e-42	84.62	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbit...	[more]
A0A1S3CI88	4.3e-42	84.62	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucumis ...	[more]
A0A0A0LNG2	1.1e-40	82.69	zf-CHCC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432800 PE=...	[more]

BLAST of Sed0006085 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03070.1	4.4e-39	71.17	NADH-ubiquinone oxidoreductase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019401	Zinc finger, CHCC-type	PFAM	PF10276	zf-CHCC	coord: 61..98 e-value: 2.3E-14 score: 53.2
None	No IPR available	GENE3D	2.60.260.40	q5lls5 like domains	coord: 50..100 e-value: 4.7E-15 score: 57.0
None	No IPR available	PANTHER	PTHR13156	NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT	coord: 1..104
None	No IPR available	PANTHER	PTHR13156:SF1	BNAC04G49950D PROTEIN	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006085.1	Sed0006085.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
cellular_component	GO:0005747	mitochondrial respiratory chain complex I