Sed0006042 (gene) Chayote v1

Overview


Name	Sed0006042
Type	gene
Organism	Sechium edule (Chayote v1)
Description	glutaredoxin
Location	LG11: 33584430 .. 33586712 (+)
RNA-Seq Expression	Sed0006042
Synteny	Sed0006042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTCTCACGCGATGCCATGGACCATGCCGTCTTGATTTATTTATTAACAATAATATTTTCATTTTGAATTCGTGTTTCTTTCTTGACTGTCATTTCCTTAAGAGCTCGCACCGTTAGGGGTTCAGATTTTGTGCAGATTCGATCGATAATGGCGTTGGAAAAGGCTAAAGAGATCGTCGCTTCAAATCCCGTCGCCGTCTTCAGGTATCTCGATCTTCGCTTTTCTTTGTTTTTTGATTGTTAATGGATTGTTGCTGATTGCTCAATGGATGCTTTTGTTTTTCTGTTTCAAATCACAGCAAGACTTCATGTCCGTTCTGCGTTCAGGTGAAGAGGCTTTTGACTGGTCTCGGAGCCTCTTTTAAGGCTGTTGAATTGGATACTGAGAGTATGTAATCTATGTTTCTTCGTTTGAATTCTTTGCGTTTGATTGTTAGATCTCATCTTGTGTTTATAATTGCTATTTGATTGTTTATCGTAGAATCGTGCGATTGTATTTAGATTTAGTAACAATTTCTATTTCATTGTTTGCTGTAGCTTCTTGAATTAATGGAATCTTGATTGCCTATTTATTCGATACTTGGATTTACGTGCTATTAACCACGATTCCTTTGGTTTCAGATCTTGTAATTTCACTAGTTTGTGGATGTTGTTTATGGATGGATCTATCTGTTGATGCATGTTTTTAGTCAAATTCTTTAAGATAAGGAAAACTTTCTAAAGTTGAATTAAAAGGTTTTTTTTAACTGGTCATTGGTGTCTTGAGATTAAGTCTTGGCGAATTCGGAATGTCTTTTCATGCTCTAATGTGTGGATTCAGTTTGAAAAAGGGATGTTGGAAAGGGGTTTGAGGACAGGGCAAGTAGGGACATACAATTGAATGTTTGATGACTTTTAGAGATCACTTGTTTGTATGTGAAGTAAAGTAAACGTTTAGTCCCTTGATTCTGTTTTCCACTTTTTGTTTTGTTAAATTCAACTGGGTTCATCCTAATCTTTTTGTATCTTTGAATGTGACCTTTTCTTTTTTCGCAATAGTTGATTTCGAATCGCGCCTCCTTGAGTTTTTCTACCCTTTCAACAGTGATTAGGATGGGCGAAATTCCGAGATGATCGTGAATTTTGTATTGTTTAAAAGCTTTCTAAATCATGCACAAGGTAGAATTTGCAAGGTTTGTTAATTGGATTAAATTGATTTTAAAGGTGATGGAAAAGATGTACAAGCAGCACTTGCTCAGTGGACTGGACAGCGGACCGTGCCCAATGTGTTCATAGGTGGAAAGCACATTGGTGGCTGTGATGGTAAACAAATTACTGCCTTCTCAACTTGAATTACGATTATTACACGTTTTTGCCTAATTTCTTCTCTATTCTGAGAGCATTAATGCATGTTAATAATATATGCATATGCTTGGGAGTTAAGTGGAATTTAGCATAGTACTACTAAAGTAGATGTCTTAAATCTAATTACCATTTTGATGTGGGTCCTTGTTAAATGTTTCTTTTTGAATTTTGGTGTCCAAACTTTTAGGTTTATTTACTTGGTCGAACCTCCTCCTTGTAGAGTGGCTCTTTTTGTATGTTATGTATTATTTTACCAGTTCTCAATAAAAGTTCGTTTTTCATAAAATAAAACAAACCACCGGTAAGAACAAGGGAGAGTAAGTAAAGGTTTTGTTGTTTTTAGTACAACAATATTTAGGGTGGGAGGGACATTTGAATCTATAACCTTTAAAAATCGATTATACATACCAATTATGTCTAGGCGAAGTCCGTTTTGACAGAATAGTAATTAAGGGTTAATTTACCAAGCGATGCTTTTTTATTTGGTGGGGATGTAAGAAATAATATTTTGTTTTATTAAGAATTTCTTTTTGTTGCTTGGCAGCAACCGTAGCACTGAATAATAAAGGGGGGTTGGTTCCTCTGTTGACTGAAGCGGGAGCAATTGCCAAAGTTACTGCTTAGAGAAGAAGTCTGTTATCACATAAATAAACGTTCTACTTATGATTTTCTAGTTGCATTATTGTCTTTTCTTCTAAAAAAAATGCTTTTACAGTGGAATTTTAGTTTGTATAAATAACTGGAAGGAACTTGTGCTTCCTTTGCATCTATGGTAAATGTCCCAAGTTTCCTATAGCCGGATTGTTTCTATATTTTTAAACAAAATTCTAGTTCAGCCTTGGAGTCTTGGATGCCTGGATTTTGATTTTTTTTCATTGTTGCAGTAATCCAAATGCCCATCTCATGAGAATTTTGGATTACCAAGAAGTGAACGACCC

mRNA sequence

TATTCTCACGCGATGCCATGGACCATGCCGTCTTGATTTATTTATTAACAATAATATTTTCATTTTGAATTCGTGTTTCTTTCTTGACTGTCATTTCCTTAAGAGCTCGCACCGTTAGGGGTTCAGATTTTGTGCAGATTCGATCGATAATGGCGTTGGAAAAGGCTAAAGAGATCGTCGCTTCAAATCCCGTCGCCGTCTTCAGCAAGACTTCATGTCCGTTCTGCGTTCAGGTGAAGAGGCTTTTGACTGGTCTCGGAGCCTCTTTTAAGGCTGTTGAATTGGATACTGAGAGTGATGGAAAAGATGTACAAGCAGCACTTGCTCAGTGGACTGGACAGCGGACCGTGCCCAATGTGTTCATAGGTGGAAAGCACATTGGTGGCTGTGATGCAACCGTAGCACTGAATAATAAAGGGGGGTTGGTTCCTCTGTTGACTGAAGCGGGAGCAATTGCCAAAGTTACTGCTTAGAGAAGAAGTCTGTTATCACATAAATAAACGTTCTACTTATGATTTTCTAGTTGCATTATTGTCTTTTCTTCTAAAAAAAATGCTTTTACAGTGGAATTTTAGTTTGTATAAATAACTGGAAGGAACTTGTGCTTCCTTTGCATCTATGGTAAATGTCCCAAGTTTCCTATAGCCGGATTGTTTCTATATTTTTAAACAAAATTCTAGTTCAGCCTTGGAGTCTTGGATGCCTGGATTTTGATTTTTTTTCATTGTTGCAGTAATCCAAATGCCCATCTCATGAGAATTTTGGATTACCAAGAAGTGAACGACCC

Coding sequence (CDS)

ATGGCGTTGGAAAAGGCTAAAGAGATCGTCGCTTCAAATCCCGTCGCCGTCTTCAGCAAGACTTCATGTCCGTTCTGCGTTCAGGTGAAGAGGCTTTTGACTGGTCTCGGAGCCTCTTTTAAGGCTGTTGAATTGGATACTGAGAGTGATGGAAAAGATGTACAAGCAGCACTTGCTCAGTGGACTGGACAGCGGACCGTGCCCAATGTGTTCATAGGTGGAAAGCACATTGGTGGCTGTGATGCAACCGTAGCACTGAATAATAAAGGGGGGTTGGTTCCTCTGTTGACTGAAGCGGGAGCAATTGCCAAAGTTACTGCTTAG

Protein sequence

MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQWTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA

Homology

[Close]

BLAST of Sed0006042 vs. NCBI nr
Match: XP_022993774.1 (glutaredoxin isoform X1 [Cucurbita maxima] >XP_023551689.1 glutaredoxin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 3.2e-47
Identity = 97/107 (90.65%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MALEKAK+IVASNPVAVFSKTSCP+CVQVKRLLTGLGA+FKAVELDTESDG ++QAALAQ
Sbjct: 1   MALEKAKQIVASNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           WTGQRTVPNVFIGGKHIGGCDATVALN+KGGLVPLL EAGA AKV+A
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Sed0006042 vs. NCBI nr
Match: KAG7016200.1 (hypothetical protein SDJN02_21305 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.8 bits (499), Expect = 9.4e-47
Identity = 96/107 (89.72%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MALEKAK+IV SNPVAVFSKTSCP+CVQVKRLLTGLGA+FKAVELDTESDG ++QAALAQ
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           WTGQRTVPNVFIGGKHIGGCDATVALN+KGGLVPLL EAGA AKV+A
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Sed0006042 vs. NCBI nr
Match: KAG6578661.1 (Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.8 bits (499), Expect = 9.4e-47
Identity = 96/107 (89.72%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MALEKAK+IV SNPVAVFSKTSCP+CVQVKRLLTGLGA+FKAVELDTESDG ++QAALAQ
Sbjct: 315 MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 374

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           WTGQRTVPNVFIGGKHIGGCDATVALN+KGGLVPLL EAGA AKV+A
Sbjct: 375 WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 421

[Close]

BLAST of Sed0006042 vs. NCBI nr
Match: XP_022938379.1 (glutaredoxin [Cucurbita moschata])

HSP 1 Score: 195.3 bits (495), Expect = 2.7e-46
Identity = 95/107 (88.79%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MALEKAK+IV SNPVAVFSKTSCP+CVQVKRLLTGLG +FKAVELDTESDG ++QAALAQ
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGVNFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           WTGQRTVPNVFIGGKHIGGCDATVALN+KGGLVPLL EAGA AKV+A
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Sed0006042 vs. NCBI nr
Match: XP_038889541.1 (glutaredoxin-like [Benincasa hispida])

HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43
Identity = 93/107 (86.92%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MALEK KEIVASNPV VFSK+ CP+CVQVKRLLT LGASFKAVELD ESDG+DVQAALAQ
Sbjct: 1   MALEKTKEIVASNPVTVFSKSYCPYCVQVKRLLTKLGASFKAVELDIESDGRDVQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           +TGQRTVPNVFIGGKHIGGCD TVALN KGGLVP+L EAGAIAKV+A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTVALNGKGGLVPMLAEAGAIAKVSA 107

[Close]

BLAST of Sed0006042 vs. ExPASy Swiss-Prot
Match: Q9ZR41 (Glutaredoxin OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.4e-40
Identity = 81/106 (76.42%), Postives = 93/106 (87.74%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           M+L KAKEIV+ NPVAVFSKT CPFCV VK LL+ LGA+FKAVELD+E DG ++QAALA+
Sbjct: 1   MSLAKAKEIVSGNPVAVFSKTYCPFCVSVKDLLSKLGATFKAVELDSEKDGSEIQAALAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVT 107
           WTGQRTVPNVFIG KHIGGCDAT AL+ +G L+PLLTEAGAIAK +
Sbjct: 61  WTGQRTVPNVFIGRKHIGGCDATTALHREGKLLPLLTEAGAIAKTS 106

[Close]

BLAST of Sed0006042 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 7.5e-39
Identity = 78/103 (75.73%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MAL KAKE VAS PV V+SK+ CPFCV+VK+L   LGA+FKA+ELD ESDG ++Q+ALA+
Sbjct: 1   MALAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIA 104
           WTGQRTVPNVFI GKHIGGCD T+ALNN+G LVPLLTEAGAIA
Sbjct: 61  WTGQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLLTEAGAIA 103

[Close]

BLAST of Sed0006042 vs. ExPASy Swiss-Prot
Match: Q9FNE2 (Glutaredoxin-C2 OS=Arabidopsis thaliana OX=3702 GN=GRXC2 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 4.8e-38
Identity = 79/107 (73.83%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MA++KAKEIV S  V VFSKT CP+CV+VK LL  LGA FKAVELDTESDG  +Q+ LA+
Sbjct: 1   MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           WTGQRTVPNVFIGG HIGGCDAT  L+  G LVPLLTEAGAIA  TA
Sbjct: 61  WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]

BLAST of Sed0006042 vs. ExPASy Swiss-Prot
Match: Q6K953 (Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC4 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.3e-38
Identity = 78/103 (75.73%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MAL+KAKEIVAS+PV VFSKT CPFC +VKRLL  L AS+KAVELD ESDG ++Q+ALA 
Sbjct: 27  MALDKAKEIVASSPVVVFSKTYCPFCARVKRLLAELAASYKAVELDVESDGSELQSALAD 86

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIA 104
           WTGQRTVP VFI GKHIGGCD T+A++  G LVPLLTEAGAIA
Sbjct: 87  WTGQRTVPCVFIKGKHIGGCDDTMAMHKGGNLVPLLTEAGAIA 129

[Close]

BLAST of Sed0006042 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.1e-37
Identity = 72/102 (70.59%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MA+ K KE+V+SN V VFSKT CP+C  VK+LL  LGA +K VELDTESDG ++Q ALA+
Sbjct: 1   MAMTKTKELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAI 103
           WTGQRTVPNVFIGGKHIGGCD+T A +++G LVPLLTEAGA+
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDSTTAKHSQGQLVPLLTEAGAV 102

[Close]

BLAST of Sed0006042 vs. ExPASy TrEMBL
Match: A0A6J1K114 (glutaredoxin isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489683 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 97/107 (90.65%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MALEKAK+IVASNPVAVFSKTSCP+CVQVKRLLTGLGA+FKAVELDTESDG ++QAALAQ
Sbjct: 1   MALEKAKQIVASNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           WTGQRTVPNVFIGGKHIGGCDATVALN+KGGLVPLL EAGA AKV+A
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Sed0006042 vs. ExPASy TrEMBL
Match: A0A6J1FDX0 (glutaredoxin OS=Cucurbita moschata OX=3662 GN=LOC111444645 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 95/107 (88.79%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MALEKAK+IV SNPVAVFSKTSCP+CVQVKRLLTGLG +FKAVELDTESDG ++QAALAQ
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGVNFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           WTGQRTVPNVFIGGKHIGGCDATVALN+KGGLVPLL EAGA AKV+A
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Sed0006042 vs. ExPASy TrEMBL
Match: A0A6J1BY96 (glutaredoxin OS=Momordica charantia OX=3673 GN=LOC111006676 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.0e-43
Identity = 90/107 (84.11%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MALEKAKEIV+SNPVAVFSK+ CPFCV VK+LLT +GASFKAVELD ESDG ++QAALAQ
Sbjct: 1   MALEKAKEIVSSNPVAVFSKSYCPFCVDVKKLLTEVGASFKAVELDRESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           WTGQRTVPNVFIGGKHIGGCDATVAL+ KGGLVP+L EAGA+AKV+A
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALHKKGGLVPMLAEAGAVAKVSA 107

[Close]

BLAST of Sed0006042 vs. ExPASy TrEMBL
Match: A0A0A0KR45 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_5G523190 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 6.8e-43
Identity = 91/107 (85.05%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MALEKAKEIVASNPVAVFSK+ CPFCVQVKRLLT LG SFKA+ELDTESDG+++QAALAQ
Sbjct: 1   MALEKAKEIVASNPVAVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           +TGQRTVPNVFIGGKHIGGCD T+ALN+ G LVPLL EAGAIAKV A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAIAKVAA 107

[Close]

BLAST of Sed0006042 vs. ExPASy TrEMBL
Match: A0A5A7T277 (Glutaredoxin-C6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G001730 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42
Identity = 91/107 (85.05%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MALEKAKEIVASNPV VFSK+ CPFCVQVKRLLT LG SFKA+ELDTESDG++VQAALAQ
Sbjct: 1   MALEKAKEIVASNPVTVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREVQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           +TGQRTVPNVFIGGKHIGGCD T+ALN+ G LVPLL EAGAIAKV A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAIAKVAA 107

[Close]

BLAST of Sed0006042 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 158.3 bits (399), Expect = 3.4e-39
Identity = 79/107 (73.83%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           MA++KAKEIV S  V VFSKT CP+CV+VK LL  LGA FKAVELDTESDG  +Q+ LA+
Sbjct: 1   MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           WTGQRTVPNVFIGG HIGGCDAT  L+  G LVPLLTEAGAIA  TA
Sbjct: 61  WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]

BLAST of Sed0006042 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 6.3e-33
Identity = 66/103 (64.08%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 1   MALEKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQ 60
           + + KAKEIV++ PV VFSKT C +C +VK+LLT LGA+FK +ELD  SDG ++Q+AL++
Sbjct: 17  VVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSE 76

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEAGAIA 104
           WTGQ TVPNVFI G HIGGCD  +  N +G LVPLLTEAGAIA
Sbjct: 77  WTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAIA 119

[Close]

BLAST of Sed0006042 vs. TAIR 10
Match: AT5G40370.2 (Glutaredoxin family protein )

HSP 1 Score: 137.5 bits (345), Expect = 6.3e-33
Identity = 67/91 (73.63%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 17  VFSKTSCPFCVQVKRLLTGLGASFKAVELDTESDGKDVQAALAQWTGQRTVPNVFIGGKH 76
           + SKT CP+CV+VK LL  LGA FKAVELDTESDG  +Q+ LA+WTGQRTVPNVFIGG H
Sbjct: 42  ICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPNVFIGGNH 101

Query: 77  IGGCDATVALNNKGGLVPLLTEAGAIAKVTA 108
           IGGCDAT  L+  G LVPLLTEAGAIA  TA
Sbjct: 102 IGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 132

[Close]

BLAST of Sed0006042 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-19
Identity = 52/97 (53.61%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 4   EKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELD-TESDGKDVQAALAQWT 63
           E  K  VA NPV V+SKT C +  QVK L   L      VELD   S+G  +Q  L + T
Sbjct: 76  ETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLGSEGSQLQNVLEKIT 135

Query: 64  GQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEA 100
           GQ TVPNVFIGGKHIGGC  T+ L+NKG L  +L EA
Sbjct: 136 GQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEA 172

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BLAST of Sed0006042 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 88.6 bits (218), Expect = 3.3e-18
Identity = 47/97 (48.45%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 4   EKAKEIVASNPVAVFSKTSCPFCVQVKRLLTGLGASFKAVELD-TESDGKDVQAALAQWT 63
           E  ++ V  N V ++SKT C +C +VK L   LG     VELD     G  +Q  L + T
Sbjct: 71  ESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLT 130

Query: 64  GQRTVPNVFIGGKHIGGCDATVALNNKGGLVPLLTEA 100
           GQ TVPNVF+ GKHIGGC  TV LN KG L  +L EA
Sbjct: 131 GQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEA 167

The following BLAST results are available for this feature:

BLAST of Sed0006042 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993774.1	3.2e-47	90.65	glutaredoxin isoform X1 [Cucurbita maxima] >XP_023551689.1 glutaredoxin [Cucurbi...	[more]
KAG7016200.1	9.4e-47	89.72	hypothetical protein SDJN02_21305 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6578661.1	9.4e-47	89.72	Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita...	[more]
XP_022938379.1	2.7e-46	88.79	glutaredoxin [Cucurbita moschata]	[more]
XP_038889541.1	2.2e-43	86.92	glutaredoxin-like [Benincasa hispida]	[more]

BLAST of Sed0006042 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR41	1.4e-40	76.42	Glutaredoxin OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
P55142	7.5e-39	75.73	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]
Q9FNE2	4.8e-38	73.83	Glutaredoxin-C2 OS=Arabidopsis thaliana OX=3702 GN=GRXC2 PE=3 SV=1	[more]
Q6K953	6.3e-38	75.73	Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC4...	[more]
P55143	4.1e-37	70.59	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]

BLAST of Sed0006042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K114	1.6e-47	90.65	glutaredoxin isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489683 PE=3 SV=1	[more]
A0A6J1FDX0	1.3e-46	88.79	glutaredoxin OS=Cucurbita moschata OX=3662 GN=LOC111444645 PE=3 SV=1	[more]
A0A6J1BY96	1.0e-43	84.11	glutaredoxin OS=Momordica charantia OX=3673 GN=LOC111006676 PE=3 SV=1	[more]
A0A0A0KR45	6.8e-43	85.05	Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_5G523190 PE=3 SV=1	[more]
A0A5A7T277	1.5e-42	85.05	Glutaredoxin-C6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G0017...	[more]

BLAST of Sed0006042 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40370.1	3.4e-39	73.83	Glutaredoxin family protein	[more]
AT5G63030.1	6.3e-33	64.08	Thioredoxin superfamily protein	[more]
AT5G40370.2	6.3e-33	73.63	Glutaredoxin family protein	[more]
AT2G20270.1	1.0e-19	53.61	Thioredoxin superfamily protein	[more]
AT4G28730.1	3.3e-18	48.45	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 15..33 score: 47.15 coord: 74..87 score: 46.13 coord: 60..73 score: 63.1
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 15..94 e-value: 3.8E-28 score: 95.5
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 15..77 e-value: 1.0E-20 score: 73.7
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..107 e-value: 5.7E-40 score: 137.5
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 1..105
None	No IPR available	PANTHER	PTHR45694:SF14	GLUTAREDOXIN-C2	coord: 1..105
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 3..103 score: 26.187172
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 14..95 e-value: 1.35859E-45 score: 139.982
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 17..33
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 3..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006042.1	Sed0006042.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity