Sed0005964 (gene) Chayote v1

BLAST of Sed0005964 vs. NCBI nr
Match: XP_038877934.1 (RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] >XP_038877936.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] >XP_038877937.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] >XP_038877938.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1890.9 bits (4897), Expect = 0.0e+00
Identity = 921/1117 (82.45%), Postives = 1005/1117 (89.97%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQL+GFP GV Q+SVK FVE FTGKGTIDAI TKRS+GRG R++AIIQFT EE AK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVERFTGKGTIDAINTKRSKGRGRRMYAIIQFTDEEGAK 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
             IIS A   L Y +SYLKAREWK DI+P P VFE NF+GLRLHLGCQISKESF +LWTES
Sbjct: 61   SIISKATEGLFYGTSYLKAREWKHDILPDPPVFEYNFKGLRLHLGCQISKESFSMLWTES 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            N+S+DF FEQR+L FFIS+P VDYMLVLRY+NIWQV+LHKPQGQ  SVDYLLIQL GAPR
Sbjct: 121  NVSVDFGFEQRKLYFFISYPHVDYMLVLRYENIWQVELHKPQGQ--SVDYLLIQLFGAPR 180

Query: 181  IYERDAKSFGPISQDPLLRFSMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFH 240
            IYERDA S G I  DP L FSM+ DT WFRATDFTPSCCIGQSAA+C+EIPYGRQLPNFH
Sbjct: 181  IYERDAISLGHIIGDPFLNFSMEVDTQWFRATDFTPSCCIGQSAAICLEIPYGRQLPNFH 240

Query: 241  DKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYAILFKINSLVQHGCLPGPA 300
            DKFA+FKE  GKF+LV+GS+YSS+V LVPV+RP  +INLPYAILFKIN LVQ GCLPGPA
Sbjct: 241  DKFAYFKEFNGKFSLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPA 300

Query: 301  LDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPPLLP 360
            LD +FY MVDP+ +NIAFIDHALKKL  LKECCYNPSKWLDEEYRKY KSKNPP+PP+L 
Sbjct: 301  LDINFYQMVDPRIYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKSKNPPQPPILS 360

Query: 361  LNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTEL 420
            L+EGLVYVH+VQVTPCKVYF GPEVNVSNRVLRRY DYLDNFLRVSFVDEEL KMYSTEL
Sbjct: 361  LSEGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLDNFLRVSFVDEELDKMYSTEL 420

Query: 421  SPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSNR--------------LTA 480
            SPR SS+L DGKTKIFKRILSVL+DGITIGDKKFEFLAYSS++              LTA
Sbjct: 421  SPRASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTA 480

Query: 481  ARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFS 540
            ARIR+WMGDFH IRNVAKYAARLGQSFGSSTET SVSRREV +IPDIEV+S  GVNYVFS
Sbjct: 481  ARIRRWMGDFHCIRNVAKYAARLGQSFGSSTETLSVSRREVNLIPDIEVESGGGVNYVFS 540

Query: 541  DGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYEST 600
            DGIGKIS SFAK VAKKCGIRH PSAFQIRYAGFKGVISVDPTSS+KLSLRNSMLKYEST
Sbjct: 541  DGIGKISVSFAKKVAKKCGIRHMPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQAL 660
            DTKLDVLSWSKYHPCFLNRQLITLLSTLGV+DHVFESKQ+ELID+LDTIF+DP+KAQ+AL
Sbjct: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQRELIDELDTIFSDPMKAQRAL 660

Query: 661  ELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGC 720
            ELMSPGENT ILKE++ CGY PDSEPFL MMLHTFRE KLL+LRRKSRIFIPNGRAM+GC
Sbjct: 661  ELMSPGENTKILKEMMLCGYRPDSEPFLWMMLHTFRESKLLELRRKSRIFIPNGRAMLGC 720

Query: 721  LDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVL 780
            LDET NLEYGEVFVQC AHQQL+ DHIIFK+ KS+R+FIVTGTVVVAKNPCLHPGDVRVL
Sbjct: 721  LDETRNLEYGEVFVQCSAHQQLRDDHIIFKRRKSNRHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  NAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840
             AVDVP+LHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP
Sbjct: 781  TAVDVPALHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840

Query: 841  IPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSI 900
            +PSKLLDHDVTMEEV EYFANYM+NDSLGII+NAHTAFADKEP+KAMS  CI+LAKLFSI
Sbjct: 841  VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPEKAMSNPCIELAKLFSI 900

Query: 901  AVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIM-IKSL 960
            AVDFPKTG+PALIP++LRV+EYPDFMDK DKV+Y+S N LGKLFRM+D+IGP I  I+S 
Sbjct: 901  AVDFPKTGIPALIPANLRVQEYPDFMDKADKVTYESKNVLGKLFRMLDNIGPNIKNIRSF 960

Query: 961  TFTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLT 1020
             +T +VAR+AYDPDMEVEGFEEYLDDA+++KN YDMRLGNLM YYKIKTEAELISGGSLT
Sbjct: 961  AYTPDVAREAYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYYKIKTEAELISGGSLT 1020

Query: 1021 KSLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHHSYC 1080
             SLSFT+KNE ESI MAVKSLRKEARGWFNENA LHYGHD+++YARASAWYFVTYHH+Y 
Sbjct: 1021 SSLSFTKKNEAESITMAVKSLRKEARGWFNENADLHYGHDTNVYARASAWYFVTYHHTYW 1080

Query: 1081 GWYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSRY 1103
            GW +GR N GHF+SFPWC+YDKLIRIK RK N R+RY
Sbjct: 1081 GWSDGRKNHGHFLSFPWCIYDKLIRIKNRKTNSRARY 1115

BLAST of Sed0005964 vs. NCBI nr
Match: XP_022943176.1 (RNA-dependent RNA polymerase 1-like [Cucurbita moschata])

HSP 1 Score: 1890.2 bits (4895), Expect = 0.0e+00
Identity = 921/1117 (82.45%), Postives = 1005/1117 (89.97%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQLYGFP GV Q+SVK FVE FTG+G+IDAI  KRS+GRG R++AIIQF  +  AK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
            LIISLAN  L Y +SYLKAREWK DI+  PLVFE NF+GL LHLGCQIS+E FFVLW ES
Sbjct: 61   LIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRES 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            N+S++F FE+R L FFISHP VDYMLVLRY+NIWQV+LHKPQGQ  S+DYLLIQLVGAPR
Sbjct: 121  NVSVNFEFERRDLKFFISHPRVDYMLVLRYENIWQVELHKPQGQ--SIDYLLIQLVGAPR 180

Query: 181  IYERDAKSFGPISQDPLLRFSMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFH 240
            IYERD K FG IS+DP L FS + DT WFRATDFTPSCCIGQS ALC+EIPYGR LPNFH
Sbjct: 181  IYERDTKLFGHISEDPFLSFSKEMDTKWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFH 240

Query: 241  DKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYAILFKINSLVQHGCLPGPA 300
            DKFA+F EI GKFTL +GS+YSS+V LVPV+RP  SI+LPYAILFKIN LVQ GCLPGP+
Sbjct: 241  DKFAYFNEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPS 300

Query: 301  LDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPPLLP 360
            LD SFY MVDPQ HNIAFID AL+KLY+LKECCYNPSKWL EEYRKYSK  NPP+PP L 
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLS 360

Query: 361  LNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTEL 420
            L+EGLVYVH+VQVTPC+VYF GPEVNVSNRVLRRY +YLDNFLRVSFVDEEL K+YSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420

Query: 421  SPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSNRL--------------TA 480
            SPRESS+L DGKTKIFKRILSVLKDGITIGDKKFEFLAYSS++L              TA
Sbjct: 421  SPRESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITA 480

Query: 481  ARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFS 540
            A+IRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREV+VIPDIEV+SD G+NYVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVKVIPDIEVKSDAGINYVFS 540

Query: 541  DGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYEST 600
            DGIGKISASFA+ VA+KC IRHTPSAFQIRYAGFKGVISVDPTS +KLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCHIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQAL 660
            DTKLDVLSWS+YHPC+LNRQLITLLSTLGV+D +FESKQKELIDQLDTIF DP+KAQQAL
Sbjct: 601  DTKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQAL 660

Query: 661  ELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGC 720
            ELMSPGENTNILKEIISCGY PDSEPFL MMLHTFRE KLL+LRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC AHQQL +DHIIFK++KS+++FIVTGTVVVAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  NAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840
             AVDVPSLHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTP
Sbjct: 781  TAVDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  IPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSI 900
            +PS+LLDHDVTMEEV EYFANYM+NDSLGII+NAHTAFAD  P+KAMS+ CIKLAKLFSI
Sbjct: 841  VPSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIMIKSLT 960
            AVDFPKTGVPALI +DLRV+ YPDFMDK DK SYKS N LGKLFRM+DDI P+I IKS+ 
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLTK 1020
            FTRE+ARQAYDPDMEV+GFEEYLDDAL++KN YDMRLGNLM+YYKIKTEAELISG SLTK
Sbjct: 961  FTREIARQAYDPDMEVKGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHHSYCG 1080
            S SFT+KNE ESIIMAVKSLRKEARGWFNENA LH+GHD++ YARASAWYFVTYH+SY G
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSRYR 1104
            WY G  N+ HF+SFPWCVYDKLIRIKKRKI  R+R+R
Sbjct: 1081 WY-GEKNESHFLSFPWCVYDKLIRIKKRKIGARARHR 1114

BLAST of Sed0005964 vs. NCBI nr
Match: KAG6599932.1 (RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1890.2 bits (4895), Expect = 0.0e+00
Identity = 922/1117 (82.54%), Postives = 1005/1117 (89.97%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQLYGFP GV Q+SVK FVE FTG+G+IDAI  KRS+GRG R++AIIQF  +  AK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
            LIISLAN  L Y +SYLKAREWK DI+  PLVFE NF+GL LHLGCQIS+E FFVLW ES
Sbjct: 61   LIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRES 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            N+S++F FE+R L FFISHP VDYMLVLRY+NIWQV+LHKPQGQ  S+DYLLIQLVGAPR
Sbjct: 121  NVSVNFEFERRDLKFFISHPRVDYMLVLRYENIWQVELHKPQGQ--SIDYLLIQLVGAPR 180

Query: 181  IYERDAKSFGPISQDPLLRFSMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFH 240
            IYERD K FG IS+DP L FS + DT WFRATDFTPSCCIGQS ALC+EIPYGR LPNFH
Sbjct: 181  IYERDTKLFGHISEDPFLSFSKEMDTKWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFH 240

Query: 241  DKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYAILFKINSLVQHGCLPGPA 300
            DKFA+FKEI GKFTL +GS+YSS+V LVPV+RP  SI+LPYAILFKIN LVQ GCLPGP+
Sbjct: 241  DKFAYFKEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPS 300

Query: 301  LDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPPLLP 360
            LD SFY MVDPQ HNIAFID AL+KLY+LKECCYNPSKWL EEYRKYSK +NPP+PP L 
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLRNPPQPPNLS 360

Query: 361  LNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTEL 420
            L+EGLVYVH+VQVTPC+VYF GPEVNVSNRVLRRY +YLDNFLRVSFVDEEL K+YSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420

Query: 421  SPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSS--------------NRLTA 480
            SPRESS+L DGKTKIFKRILSVLKDGITIGDKKFEFLAYSS              N +TA
Sbjct: 421  SPRESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRNGITA 480

Query: 481  ARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFS 540
            A+IRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEV+SD G+NYVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVKSDAGINYVFS 540

Query: 541  DGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYEST 600
            DGIGKISASFA+ VA+KC IRHTPSAFQIRYAGFKGVISVDPTS +KLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCRIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQAL 660
            DTKLDVLSWS+YHPC+LNRQLITLLSTLGV+D +FESKQKELIDQLDTIF DP+KAQQAL
Sbjct: 601  DTKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQAL 660

Query: 661  ELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGC 720
            ELMSPGENTNILKEIISCGY PDSEPFL MML+TFRE KLL+LRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLYMMLYTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC AHQQL +DHIIFK++KS+++FIVTGTVVVAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  NAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840
             AVDVPSLHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTP
Sbjct: 781  TAVDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  IPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSI 900
            + S+LLDHDVTMEEV EYFANYM+NDSLGII+NAHTAFAD  P+KAMS+ CIKLAKLFSI
Sbjct: 841  VLSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIMIKSLT 960
            AVDFPKTGVPALI +DLRV+ YPDFMDK DK SYKS N LGKLFRM+DDI P+I IKS+ 
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLTK 1020
            FTRE+ARQAYDPDMEVEGFEEYLDDAL++KN YDMRLGNLM+YYKIKTEAELISG SLTK
Sbjct: 961  FTREIARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHHSYCG 1080
            S SFT+KNE ESIIMAVKSLRKEARGWFNENA LH+GHD++ YARASAWYFVTYH+SY G
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSRYR 1104
            WY G  N+ HF+SFPWCVYDKLIRIKKRKI  R+R+R
Sbjct: 1081 WY-GEKNESHFLSFPWCVYDKLIRIKKRKIGARARHR 1114

BLAST of Sed0005964 vs. NCBI nr
Match: XP_023539816.1 (RNA-dependent RNA polymerase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1887.1 bits (4887), Expect = 0.0e+00
Identity = 921/1117 (82.45%), Postives = 1003/1117 (89.79%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQLYGFP GV Q+SVK FVE FTG+G+IDAI  KRS+GRG R++AIIQF  +  AK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
            LIISLAN  L Y +SYLKAREWK DI+  PLVFE NF+GL LHLGCQIS+E FFVLW ES
Sbjct: 61   LIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRES 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            N+S++F FE+R L FFISH   DYMLVLRY+NIWQV+LHKP GQ  S+DYLLIQLVGAPR
Sbjct: 121  NVSVNFEFERRDLKFFISHSHADYMLVLRYENIWQVELHKPPGQ--SIDYLLIQLVGAPR 180

Query: 181  IYERDAKSFGPISQDPLLRFSMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFH 240
            IYERD K FG IS+DP L FS + DT WFRATDFTPSCCIGQS ALC+EIPYGR LPNFH
Sbjct: 181  IYERDTKLFGHISEDPFLSFSKEMDTEWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFH 240

Query: 241  DKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYAILFKINSLVQHGCLPGPA 300
            DKFA+FKEI GKFTL +GS+YSS+V LVPV+RP  SI+LPYAILFKIN LVQ GCLPGPA
Sbjct: 241  DKFAYFKEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPA 300

Query: 301  LDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPPLLP 360
            LD SFY MVDPQ HNIAFID AL+KLY+LKECCYNPSKWL EEYRKYSK  NPP+PP L 
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLS 360

Query: 361  LNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTEL 420
            L+EGLVYVH+VQVTPC+VYF GPEVNVSNRVLRRY +YLDNFLRVSFVDEEL K+YSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420

Query: 421  SPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSNRL--------------TA 480
            SPRESS+L DGKTKIFKRILSVLKDGITIGDKKFEFLAYSS++L              TA
Sbjct: 421  SPRESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITA 480

Query: 481  ARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFS 540
            A+IRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEV+SD G+NYVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVKSDAGINYVFS 540

Query: 541  DGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYEST 600
            DGIGKISASFA+ VA+KC IRHTPSAFQIRYAGFKGVISVDPTS +KLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCRIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQAL 660
            DTKLDVLSWS+YHPC+LNRQLITLLSTLGV+D +FESKQKELIDQLDTIF DP+KAQQAL
Sbjct: 601  DTKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQAL 660

Query: 661  ELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGC 720
            ELMSPGENTNILKEIISCGY PDSEPFLSMMLHTFRE KLL+LRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLSMMLHTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC AHQQL +DHIIFK++KS+++FIVTGTVVVAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  NAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840
             AVDVPSLHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTP
Sbjct: 781  TAVDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  IPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSI 900
            + S+LLDHDVTMEEV EYFANYM+NDSLGII+NAHTAFAD  P+KAMS+ CIKLAKLFSI
Sbjct: 841  VLSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIMIKSLT 960
            AVDFPKTGVPALI +DLRV+ YPDFMDK DK SYKS N LGKLFRM+DDI P+I IKS+ 
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLTK 1020
            FTRE+ARQAYDPDMEV+GFEEYLDDAL++KN YDMRLGNLM+YYKIKTEAELISG SLTK
Sbjct: 961  FTREIARQAYDPDMEVDGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHHSYCG 1080
            S SFT+KNE ESIIMAVKSLRKEARGWFNENA LH+GHD++ YARASAWYFVTYH+SY G
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSRYR 1104
            WY G  N+ HF+SFPWCVYDKLIRIKKRKI  R+R+R
Sbjct: 1081 WY-GEKNESHFLSFPWCVYDKLIRIKKRKIGARARHR 1114

BLAST of Sed0005964 vs. NCBI nr
Match: XP_022994945.1 (RNA-dependent RNA polymerase 1-like [Cucurbita maxima] >XP_022994953.1 RNA-dependent RNA polymerase 1-like [Cucurbita maxima])

HSP 1 Score: 1876.3 bits (4859), Expect = 0.0e+00
Identity = 917/1117 (82.09%), Postives = 1001/1117 (89.62%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQLYGFP GV Q+SVK FVE FTG+G+IDAI  KRS+GRG R++AIIQF  +  AK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
            LIISLAN  L Y +S LKAREWK DI+  PLVFE NF+GL LHLGCQIS+E FFVLWTES
Sbjct: 61   LIISLANASLRYGTSSLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWTES 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            N+S++F FE+R L FFISHP VDYMLVLRY+NIWQV+LHKP GQ  S+DYLLIQLVGAPR
Sbjct: 121  NVSVNFEFERRDLKFFISHPLVDYMLVLRYENIWQVELHKPPGQ--SIDYLLIQLVGAPR 180

Query: 181  IYERDAKSFGPISQDPLLRFSMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFH 240
            IYERD K FG IS+DP L FS + DT WFRATDFTPSCCIGQS ALC+EIPYGRQLPNFH
Sbjct: 181  IYERDTKLFGHISEDPFLSFSKEMDTEWFRATDFTPSCCIGQSGALCLEIPYGRQLPNFH 240

Query: 241  DKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYAILFKINSLVQHGCLPGPA 300
            DKFA+FKEI GKFTL  GS+YSS+V LVPV+RP  SI+LPYAILFKIN LVQ GCLPGPA
Sbjct: 241  DKFAYFKEIKGKFTLATGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPA 300

Query: 301  LDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPPLLP 360
            LD SFY MVDPQ HNIAFID AL+KLY+LKECCYNPSKWL EEYRKYSK  NPP+PP L 
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLS 360

Query: 361  LNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTEL 420
            L+EGLVYVH+VQVTPC+VYF GPEVNVSNRVLRRY +YLDNFLRVSFVDEEL ++YSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDRLYSTEL 420

Query: 421  SPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSNRL--------------TA 480
            SPRESS+L DGKTKIFKRILSVLKDGITIGDKKFEFLAYSS++L              TA
Sbjct: 421  SPRESSSLGDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITA 480

Query: 481  ARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFS 540
            A+IRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEV+SD G+NYVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVESDAGINYVFS 540

Query: 541  DGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYEST 600
            DGIGKISASFA+ VA+KC IRHTPSAFQIRYAGFKGVISVDPTS +KLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCRIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQAL 660
            D KLDVLSWS+YHPC+LNRQLITLLSTLGV+D +FESKQKELIDQLDTIF +P+KAQQAL
Sbjct: 601  DMKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMNPLKAQQAL 660

Query: 661  ELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGC 720
            ELMSPGENTNILKEIISCGY PDSEPFL MMLHTFRE KLL+LRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC AHQQL +DHIIFK++KS+++FIVTGTVVVAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  NAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840
             AVDVP+LHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIP  QVEPMDYTP
Sbjct: 781  TAVDVPALHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPHQQVEPMDYTP 840

Query: 841  IPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSI 900
            + S+LLDHDVTMEEV EYFANYM+NDSLGII+NAHTAFAD  P+KAMS+ CIKLAKLFSI
Sbjct: 841  VLSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSWPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIMIKSLT 960
            AVDFPKTGVPALI +DLRV+ YPDFMDK DK  YKS N LGKLFRM+DDI P+I IKS+ 
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQRYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLTK 1020
            FTRE+ARQAYDPDMEVEGFEEYLDDAL++KN YDMRLGNLM+YYKIKTEAELISG SLTK
Sbjct: 961  FTREIARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHHSYCG 1080
            S SFT+KNE ESIIMAVKSLRKEARGWFNENA LH+GHD++ YARASAWYFVTYH+SY G
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSRYR 1104
            W+ G  N+ HF+SFPWCVYDKLIRIKKRKI  R+R+R
Sbjct: 1081 WF-GEKNESHFLSFPWCVYDKLIRIKKRKIGPRARHR 1114

BLAST of Sed0005964 vs. ExPASy Swiss-Prot
Match: Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1276.5 bits (3302), Expect = 0.0e+00
Identity = 648/1119 (57.91%), Postives = 815/1119 (72.83%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQ++GFP GVS + VK+F+E  TG GT+ AIK ++ +  G RV+AI+QFT E   +
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
            LII+ A  RL Y  SYLKA E + DI+P P        GL++  GCQ+S + F  LW+  
Sbjct: 61   LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            ++ + F    R+L F  S    DY L L Y+NIWQ+DLH PQG+S    +L+IQ++GAP+
Sbjct: 121  DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSK--FLVIQVIGAPK 180

Query: 181  IYERDAKSFGPISQDPLLRFSMD-NDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNF 240
            I+E++ +    +    ++ F  D +D  W R TDFT S CIGQS A C+E+P    +P+F
Sbjct: 181  IFEKEDQPINLLF--GIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDF 240

Query: 241  HDKFAFFKE-IMGKFTLVNGSSYSSDVK-LVPVLRPSPSINLPYAILFKINSLVQHGCLP 300
             + FA + E     F + +GSSYSS+   LVPV+ P P  +LP+ ILFK+N+LVQ+ CL 
Sbjct: 241  RENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLS 300

Query: 301  GPALDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPP 360
            GPALD  FY +++ +K++ A IDH L+KL+ L ECCY P+ WL +EY+K+      P  P
Sbjct: 301  GPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSP 360

Query: 361  LLPLNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYS 420
             + L++GLVY+++VQVTP +VYFSGPEVNVSNRVLR YS Y++NFLRVSFVDE+L K+ S
Sbjct: 361  TISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRS 420

Query: 421  TELSPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSS--------------NR 480
             +LSPR S+     +TK++ RI SVL+DGI IGDKKFEFLA+SS              +R
Sbjct: 421  MDLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDR 480

Query: 481  LTAARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNY 540
            +TAA IR WMGDF  IRNVAKYAARLGQSF SS ET +V   E+EVIPD+E+ S +G  Y
Sbjct: 481  ITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIIS-LGTRY 540

Query: 541  VFSDGIGKISASFAKNVAKKCGI-RHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLK 600
            VFSDGIGKISA FA+ VA+KCG+   +PSAFQIRY G+KGV++VDP SS KLSLR SM K
Sbjct: 541  VFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSK 600

Query: 601  YESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKA 660
            +ES +TKLDVL+WSKY PC++NRQLITLLSTLGV D VFE KQ+E++D+LD I T P++A
Sbjct: 601  FESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEA 660

Query: 661  QQALELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRA 720
             +AL LM+PGENTNILK +I CGY PD+EPFLSMML  FR  KLL+LR K+RIFI  GR+
Sbjct: 661  HEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRS 720

Query: 721  MMGCLDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGD 780
            MMGCLDET  LEYG+V VQ        SD +     +  R FI+TG VVVAKNPCLHPGD
Sbjct: 721  MMGCLDETRTLEYGQVVVQ-------YSDPM-----RPGRRFIITGPVVVAKNPCLHPGD 780

Query: 781  VRVLNAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPM 840
            VRVL AV+VP+L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +L+PP   EPM
Sbjct: 781  VRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPM 840

Query: 841  DYTPIPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAK 900
            DYTP P+++LDHDVT+EEV EYFANY++NDSLGII+NAHTAFADKEP KA S  CI+LAK
Sbjct: 841  DYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAK 900

Query: 901  LFSIAVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIMI 960
             FS AVDFPKTGV A+IP  L V+EYPDFM+K DK +Y+S N +GKLFR V +  P  +I
Sbjct: 901  KFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPP-LI 960

Query: 961  KSLTFTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGG 1020
               +FT +VA ++YD DMEV+GFEEY+D+A + K  YD +LGNLM YY IKTEAE++SGG
Sbjct: 961  SIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGG 1020

Query: 1021 SLTKSLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHH 1080
             +  S SFT++ + ESI  AV++LRKE    FN +       + +  A+ASAWY VTYH 
Sbjct: 1021 IMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASE-----EEENESAKASAWYHVTYHS 1080

Query: 1081 SYCGWYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSR 1102
            SY G Y    N+ HF+SF WCVYDKL+RIKK  +  R R
Sbjct: 1081 SYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQR 1093

BLAST of Sed0005964 vs. ExPASy Swiss-Prot
Match: Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 863.2 bits (2229), Expect = 3.1e-249
Identity = 441/734 (60.08%), Postives = 551/734 (75.07%), Query Frame = 0

Query: 378  VYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTELSPRESSTLIDGKTKIFK 437
            VYF GPE+NVSNRV+R +S  ++NFLR+SFVDE+  K+ +T+LSPR +S     +T ++K
Sbjct: 9    VYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYK 68

Query: 438  RILSVLKDGITIGDKKFEFLAYSSNR--------------LTAARIRKWMGDFHSIRNVA 497
            R+LSVL DGITIG K FEFLA+SS++              L A+ IR WMGDF +IRNVA
Sbjct: 69   RVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVA 128

Query: 498  KYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFSDGIGKISASFAKNVAKK 557
            KYAARLGQSF SSTET  V + EVE I DI+     G  +VFSDGIGKIS++FA  VA K
Sbjct: 129  KYAARLGQSFSSSTETLKVQKYEVEEISDIK----NGTQHVFSDGIGKISSAFANEVAMK 188

Query: 558  CGI-RHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYESTDTKLDVLSWSKYHPCF 617
            C + R  PSAFQIRY G+KGV++VDPTS  KLSLR SMLK++S +  +DVL++SKY P F
Sbjct: 189  CNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGF 248

Query: 618  LNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQALELMSPGENTNILKEII 677
            LNRQLITLLSTLGV D VFE KQ+E ++QL+ + TDP  A +A+ELM  GE TN +KE++
Sbjct: 249  LNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELL 308

Query: 678  SCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGCLDETGNLEYGEVFVQC 737
             CGY PD EP+LSM+L TFR  KLL+L+ KSRI IP GRAMMGCLDET  L+YG+VF++ 
Sbjct: 309  LCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRA 368

Query: 738  YAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVLNAVDVPSLHHMVDCVV 797
             +             N +DR F VTG VV+AKNPCLHPGD+R+L+AVDVP LHHM +CVV
Sbjct: 369  TS-----------GVNDNDR-FTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVV 428

Query: 798  FPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTPIPSKLLDHDVTMEEVH 857
            FPQ+GPRPHPNECSGSDLDGDIYFV WDP LIPP  V PMDYTP P++ LDHDVT+EEV 
Sbjct: 429  FPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVE 488

Query: 858  EYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSIAVDFPKTGVPALIPSD 917
            EYF NY++N+SLG+I+NAH  FADKE  KA S  CI+LAKLFSIAVDFPKTGVPALIP +
Sbjct: 489  EYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPE 548

Query: 918  LRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIMIKSLTFTREVARQAYDPDMEV 977
            L V+EYPDFM+K DKV+Y+S   +GKL+R +    P I      FTREVAR++YD DM V
Sbjct: 549  LHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIK----HFTREVARRSYDTDMIV 608

Query: 978  EGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLTKSLSFTQKNEVESIIMA 1037
            +G+E+Y+ +A+  K+ YD +LGNLM +Y IK+EAE+ISG  L  + +FT+K++ ++I +A
Sbjct: 609  DGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLA 668

Query: 1038 VKSLRKEARGWFNENAALHYGHDSD-MYARASAWYFVTYHHSYCGWYEGRNNQGHFISFP 1096
            V+SLRKEAR  F+E +    GH  D   A+ASAWY VTYH  + G Y     + HFISFP
Sbjct: 669  VRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFP 722

BLAST of Sed0005964 vs. ExPASy Swiss-Prot
Match: O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)

HSP 1 Score: 725.7 bits (1872), Expect = 7.8e-208
Identity = 417/1133 (36.80%), Postives = 653/1133 (57.63%), Query Frame = 0

Query: 4    TIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGR-GGRVFAIIQFTG-EEAAKL 63
            T+++   P  +  D + RF+E+  G+ T+ A++   ++     R FA +QFT  E  ++ 
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70

Query: 64   IISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKES-FFVLWTES 123
             +  +  +L++ +  L+  E   DIIP P+      + + L +G   S E  F  L    
Sbjct: 71   QLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKWD 130

Query: 124  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 183
             +      E+R++ F++      Y + +R+++I +       G +  +D  L++L   P+
Sbjct: 131  GVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPK 190

Query: 184  IYERDAKSFGPISQDPLLRF-SMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNF 243
            +++R         +    RF   D D  W R TDF+ S  IG S   C+E+  G  + + 
Sbjct: 191  VFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDI 250

Query: 244  HDKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPS-PSINLPYAILFKINSLVQHGCLP- 303
                 +++E     T V+G +++S  ++VP+L  +   +  PY ILF++N+LV    +  
Sbjct: 251  FSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKISL 310

Query: 304  GPALDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRK-YSKSKNPPRP 363
              A D     ++       A +   LKKL++    CY+P  ++  + +    K K+ P  
Sbjct: 311  FAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPAS 370

Query: 364  PLLPLNE-GLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKM 423
                L E  ++   +  VTP K+Y  GPE+  +N V++ +++++ +F+RV+FV+E+  K+
Sbjct: 371  AYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKL 430

Query: 424  YSTELS--PRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSNRL--------- 483
             +  LS   +E   +   +T I+ R+LS+L +GIT+G K+FEFLA+S+++L         
Sbjct: 431  PANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFA 490

Query: 484  -----TAARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDV 543
                  A  IR+WMG F  IR+++K AAR+GQ F +S +T  V  ++VE IPDIEV +D 
Sbjct: 491  SNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTD- 550

Query: 544  GVNYVFSDGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNS 603
            G +Y FSDGIGKIS +FAK VA+KCG+ H PSAFQIRY G+KGVI+VD +S  KLSLR+S
Sbjct: 551  GADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDS 610

Query: 604  MLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDP 663
            MLK++S +  L+V  W++  PCFLNR++I LLSTLG+ED +FE+ Q   +  L  +  D 
Sbjct: 611  MLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDR 670

Query: 664  IKAQQALELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPN 723
              A   L+ +S   + N+L +++  GY+P SEP+LSMML    E +L +L+ + RI +P 
Sbjct: 671  DAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPK 730

Query: 724  GRAMMGCLDETGNLEYGEVFVQ-CYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCL 783
            GR ++GC+DE G LEYG+V+V+      +L+S    + +   +   +V G VVV KNPCL
Sbjct: 731  GRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCL 790

Query: 784  HPGDVRVLNAVDVPSLHH--MVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPP 843
            HPGD+RVL+A+          +DC++FPQKG RPHPNECSG DLDGD +FV WD  +IP 
Sbjct: 791  HPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPS 850

Query: 844  LQVEPMDYTPIPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQ 903
                PMDY     +L+DHDVT+EE+H++F +YMI+D+LG+IS AH   AD++P+KA S++
Sbjct: 851  EMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQK 910

Query: 904  CIKLAKLFSIAVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDI 963
            C++LA L S AVDF KTG PA +P  L+  E+PDF+++ +K +Y S++  GKL+R V   
Sbjct: 911  CLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVK-- 970

Query: 964  GPKIMIKSLTFTREVARQ----AYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKI 1023
                   SL   +  A      AYD  +E  GFE +++ A  +++ Y  +L +LM YY  
Sbjct: 971  ------SSLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGA 1030

Query: 1024 KTEAELISGGSLTKSLSFTQKNE-----VESIIMAVKSLRKEARGWFNENAALHYGHDSD 1083
              E E+++G   TK +   + N       + I ++VK L KEA GWF ++       +  
Sbjct: 1031 ANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCE----DEQQ 1090

Query: 1084 MYARASAWYFVTYHHSYCGWYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRS 1101
                ASAWY+VTY+ ++      R+ +  F+SFPW V D L+ IK      +S
Sbjct: 1091 KKKLASAWYYVTYNPNH------RDEKLTFLSFPWIVGDVLLDIKAENAQRQS 1122

BLAST of Sed0005964 vs. ExPASy Swiss-Prot
Match: Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 8.1e-197
Identity = 407/1082 (37.62%), Postives = 605/1082 (55.91%), Query Frame = 0

Query: 51   IQFTGEEAAKLIISLA-NGRLV-YSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQI 110
            +QF    AA     LA +GRL  +  + L       D++P          G  L +G ++
Sbjct: 60   VQFGSAAAAAAAAGLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRV 119

Query: 111  SKESFFVLWTESNISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSV-S 170
            ++  F        +  +    +R++  ++ H    Y L + ++     D+    G ++  
Sbjct: 120  AERVFEAADAWDGVRAEVIPGKRRVDLYLEHDSQRYKLEVLFE-----DMKDCLGCTLDG 179

Query: 171  VDYLLIQLVGAPRIYERDAKSFGP-----ISQDPLLRFSMDNDTNWFRATDFTPSCCIGQ 230
            +  +L+QL  APRI+   +   GP        D       D   +W RA DFTP+   G+
Sbjct: 180  MGAILLQLNYAPRIHTAIS---GPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGR 239

Query: 231  SAALCVEIPYGRQLPNFHDKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYA 290
             + L +++     + +      F    +G+ T+ +     +   +VP++      ++PY 
Sbjct: 240  CSTLVLKLGKSALVSDILKSLPFSGN-LGELTMNSMDGVGASSNVVPLVHCPRDYSVPYE 299

Query: 291  ILFKINSLVQHGCLPGPALDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDE 350
            +LF++NSL+  G +    ++   +  +  Q+  +       +K+++L+  CY P +++ +
Sbjct: 300  VLFRLNSLMHMGKIVAKHVNADLFKAL--QELPVDVSRRIFEKMHKLESTCYGPLQFIQQ 359

Query: 351  EYRKYSKSKNPPRPPLLPLNEG-------LVYVHKVQVTPCKVYFSGPEVNVSNRVLRRY 410
            E     +S N     +L  NEG       L+  ++V +TP K++  GPE  V+N V++ +
Sbjct: 360  EAYSMKRSHN-----VLLSNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHH 419

Query: 411  SDYLDNFLRVSFVDEELGKMYSTELSPRESSTLIDG--KTKIFKRILSVLKDGITIGDKK 470
            S Y  +F+RV+FVDE+  K+ S  +S R          KT ++ RILS+LK G +IG K 
Sbjct: 420  SAYASDFVRVTFVDEDWSKLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKN 479

Query: 471  FEFLAYSSNR--------------LTAARIRKWMGDFHSIRNVAKYAARLGQSFGSSTET 530
            FEFLA+S+++              L A  IR+WMG F +IR+V+K AAR+GQ F SS +T
Sbjct: 480  FEFLAFSASQLRGNSVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQT 539

Query: 531  ASVSRREVEVIPDIEVQSDVGVNYVFSDGIGKISASFAKNVAKKCGIRHT--PSAFQIRY 590
              V R +VEVIPDIE+ +D G  Y+FSDGIGKIS  FAK VA   G+  T  PSAFQIRY
Sbjct: 540  FEVLRWDVEVIPDIEITTD-GSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRY 599

Query: 591  AGFKGVISVDPTSSIKLSLRNSMLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVE 650
             G+KGVI++DP SSI LSLR SM K+ES    L++ SWSK  PC++NR++I+LLSTLG+ 
Sbjct: 600  GGYKGVIAIDPMSSIDLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIR 659

Query: 651  DHVFESKQKELIDQLDTIFTDPIKAQQALELMSPGENTNILKEIISCGYSPDSEPFLSMM 710
            D +F + Q++ + + + + T+   A   L  +   E    +K ++  GY P SEP+LSM+
Sbjct: 660  DEIFVAMQQDEMRETEEMLTNKEVALSVLGKLGGSETKTAVKMLLQ-GYEPSSEPYLSMI 719

Query: 711  LHTFRELKLLDLRRKSRIFIPNGRAMMGCLDETGNLEYGEVFVQCYAHQQLQSD-HIIFK 770
            L   +E +L D+R + +I +P GR ++GCLDETG LEYG+V+++   + + Q D +  + 
Sbjct: 720  LKAHQENRLTDIRTRCKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYF 779

Query: 771  KNKSDRYFIVTGTVVVAKNPCLHPGDVRVLNAVDVPSLHHMVDCVVFPQKGPRPHPNECS 830
             N   +   V G V + KNPCLHPGD+RVL A+  P L  MVDC+VFPQ+G RPHPNECS
Sbjct: 780  YNDDGKTATVVGKVAITKNPCLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECS 839

Query: 831  GSDLDGDIYFVCWDPDLIPPLQVEPMDYTPIPSKLLDHDVTMEEVHEYFANYMINDSLGI 890
            G DLDGD+YF+ WD  LIP     PMDYT    +++DH VT+EE+ ++F +YMINDSLG 
Sbjct: 840  GGDLDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGA 899

Query: 891  ISNAHTAFADKEPKKAMSKQCIKLAKLFSIAVDFPKTGVPALIPSDLRVEEYPDFMDKDD 950
            IS AH   AD+ P KA S +C++LA L S+AVDF KTG PA +P  LR  EYPDFM++ +
Sbjct: 900  ISTAHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWE 959

Query: 951  KVSYKSDNALGKLFR-MVDDIGPKIMIKSLTFTREVARQAYDPDMEVEGFEEYLDDALHY 1010
            K  Y S+  LGKL+R  +  +       +L+ +       YDPD+EV G +E+L  A  Y
Sbjct: 960  KPMYISNGVLGKLYRSAMGHMEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEY 1019

Query: 1011 KNYYDMRLGNLMRYYKIKTEAELISGGSLTKSLSFTQKNE-----VESIIMAVKSLRKEA 1070
               Y+ +L  LM YY+ + E E+++G    K L   + N+      + I+ AV +L +EA
Sbjct: 1020 YELYEEKLTTLMNYYRAELEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREA 1079

Query: 1071 RGWFNENAALHYGHDSDMYARASAWYFVTYHHSYCGWYEGRNNQGHFISFPWCVYDKLIR 1093
            RGW      L    + D    ASAWY VTYH         R     F SFPW   D L+ 
Sbjct: 1080 RGWL-----LSSRKEEDASRMASAWYRVTYH-------PDRRRGKRFWSFPWIACDNLLA 1111

BLAST of Sed0005964 vs. ExPASy Swiss-Prot
Match: Q9SG02 (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 2.8e-157
Identity = 387/1077 (35.93%), Postives = 561/1077 (52.09%), Query Frame = 0

Query: 99   GLRLHLGCQISKESFFVLWTESNI---------SMDFRFEQRQLMFF---ISHP--DVDY 158
            G+ L +G  +S++ FFV W    +         +  F F +     F   + H   + DY
Sbjct: 134  GITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDY 193

Query: 159  MLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPRIYERDAKS--FGPISQDPLLRFSM 218
             L L   +I  V  +K     V    L++QL  +PR++ R A    +  +  D L     
Sbjct: 194  KLELLVRDIQTVRQYKTLHGFV----LILQLASSPRVWYRTADDDIYDTVPGDLL----- 253

Query: 219  DNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFHDKFAFFKEIMGKFTLVNGSSYS 278
            D+D  W R TDFT    IG+  +  V I      P + +K    +  +  F +       
Sbjct: 254  DDDDPWIRTTDFTQVGAIGRCHSYRVLIS-----PRYENK---LRTALDYFRM--RRVQE 313

Query: 279  SDVKLVPVLRPSPSINLP---------------YAILFKINSLVQHGCLPGPALDNSFYH 338
              V+  P +R  P    P               + I+F +NS++  G      L   F+ 
Sbjct: 314  ERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFD 373

Query: 339  MV--DPQKHNIAFIDHALKKLYELKECCYNPSKWLD--EEYRKYSKSKNPPRPPLLPLNE 398
            ++   P+  NIA    +LK L   K   ++  K L   +E+ +    KNP        +E
Sbjct: 374  LLRNQPKDVNIA----SLKHLCTYKRPVFDAYKRLKLVQEWIQ----KNPKLLGSHEQSE 433

Query: 399  GLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTELS-- 458
             +  + ++ +TP + Y   PEV +SNRVLRRY    + FLRV+F+DE +  + S  LS  
Sbjct: 434  DISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYF 493

Query: 459  -----PRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSNRL------------ 518
                    +S+    KT +FKR+ S+L DG  +  +K+ FLA+S+N+L            
Sbjct: 494  VAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDG 553

Query: 519  --TAARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEV-IPDIEVQSDVGV 578
                + I+ WMG F   +NVAK AAR+G  F S+  T  V   EV+  +PDIE       
Sbjct: 554  KTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERN----- 613

Query: 579  NYVFSDGIGKISASFAKNVAK--KCGIRHTPSAFQIRYAGFKGVISVDPTSS--IKLSLR 638
             YVFSDGIG I+   A  V +  K  + ++P A+QIRYAGFKGV++  P+ S  I+L+LR
Sbjct: 614  GYVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALR 673

Query: 639  NSMLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFT 698
            +SM K+ S  T L++ SW+++ P FLNRQ+ITLLS LGV D +F   Q+ ++ +L+ I  
Sbjct: 674  DSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILD 733

Query: 699  DPIKAQQALELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFI 758
            D   A + L   S  E  N    ++S G+ P +EP L  ML + R  +L  LR KSRIF+
Sbjct: 734  DTDVAFEVL-TASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFV 793

Query: 759  PNGRAMMGCLDETGNLEYGEVFVQCY--AHQQLQSDH-IIFKKNKSDRYFIVTGTVVVAK 818
             +GR +MGCLDE G LE+G+ F+Q    + +   S H   FK+ K+D   +V G V +AK
Sbjct: 794  TSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTD-LEVVKGYVAIAK 853

Query: 819  NPCLHPGDVRVLNAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLI 878
            NPCLHPGDVR+L AVDVP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD  LI
Sbjct: 854  NPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLI 913

Query: 879  PP--LQVEPMDYTPIPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKA 938
            PP       M Y     K L   V  +++ ++FA  + N+ LG I NAH   AD+    A
Sbjct: 914  PPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGA 973

Query: 939  MSKQCIKLAKLFSIAVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRM 998
            M ++C+ LA+L + AVDFPKTG    +P  L+ + YPDFM K+D  +YKS+  LG+L+R 
Sbjct: 974  MDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRR 1033

Query: 999  VDDIGPKIMIKSLTFTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKI 1058
            V ++  +    S   + + +   YD  +E+ GFE+ + +A  +K  YD +L  L+  YK+
Sbjct: 1034 VKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKV 1093

Query: 1059 KTEAELISG--GSLTKSLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSD--- 1095
            + E E+++G   S+ K  S  Q    E +  +  SL+KE R  F E    H     +   
Sbjct: 1094 QKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKN 1153

BLAST of Sed0005964 vs. ExPASy TrEMBL
Match: A0A6J1FR02 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447986 PE=3 SV=1)

HSP 1 Score: 1890.2 bits (4895), Expect = 0.0e+00
Identity = 921/1117 (82.45%), Postives = 1005/1117 (89.97%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQLYGFP GV Q+SVK FVE FTG+G+IDAI  KRS+GRG R++AIIQF  +  AK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
            LIISLAN  L Y +SYLKAREWK DI+  PLVFE NF+GL LHLGCQIS+E FFVLW ES
Sbjct: 61   LIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRES 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            N+S++F FE+R L FFISHP VDYMLVLRY+NIWQV+LHKPQGQ  S+DYLLIQLVGAPR
Sbjct: 121  NVSVNFEFERRDLKFFISHPRVDYMLVLRYENIWQVELHKPQGQ--SIDYLLIQLVGAPR 180

Query: 181  IYERDAKSFGPISQDPLLRFSMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFH 240
            IYERD K FG IS+DP L FS + DT WFRATDFTPSCCIGQS ALC+EIPYGR LPNFH
Sbjct: 181  IYERDTKLFGHISEDPFLSFSKEMDTKWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFH 240

Query: 241  DKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYAILFKINSLVQHGCLPGPA 300
            DKFA+F EI GKFTL +GS+YSS+V LVPV+RP  SI+LPYAILFKIN LVQ GCLPGP+
Sbjct: 241  DKFAYFNEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPS 300

Query: 301  LDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPPLLP 360
            LD SFY MVDPQ HNIAFID AL+KLY+LKECCYNPSKWL EEYRKYSK  NPP+PP L 
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLS 360

Query: 361  LNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTEL 420
            L+EGLVYVH+VQVTPC+VYF GPEVNVSNRVLRRY +YLDNFLRVSFVDEEL K+YSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420

Query: 421  SPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSNRL--------------TA 480
            SPRESS+L DGKTKIFKRILSVLKDGITIGDKKFEFLAYSS++L              TA
Sbjct: 421  SPRESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITA 480

Query: 481  ARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFS 540
            A+IRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREV+VIPDIEV+SD G+NYVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVKVIPDIEVKSDAGINYVFS 540

Query: 541  DGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYEST 600
            DGIGKISASFA+ VA+KC IRHTPSAFQIRYAGFKGVISVDPTS +KLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCHIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQAL 660
            DTKLDVLSWS+YHPC+LNRQLITLLSTLGV+D +FESKQKELIDQLDTIF DP+KAQQAL
Sbjct: 601  DTKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQAL 660

Query: 661  ELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGC 720
            ELMSPGENTNILKEIISCGY PDSEPFL MMLHTFRE KLL+LRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC AHQQL +DHIIFK++KS+++FIVTGTVVVAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  NAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840
             AVDVPSLHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTP
Sbjct: 781  TAVDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  IPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSI 900
            +PS+LLDHDVTMEEV EYFANYM+NDSLGII+NAHTAFAD  P+KAMS+ CIKLAKLFSI
Sbjct: 841  VPSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIMIKSLT 960
            AVDFPKTGVPALI +DLRV+ YPDFMDK DK SYKS N LGKLFRM+DDI P+I IKS+ 
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLTK 1020
            FTRE+ARQAYDPDMEV+GFEEYLDDAL++KN YDMRLGNLM+YYKIKTEAELISG SLTK
Sbjct: 961  FTREIARQAYDPDMEVKGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHHSYCG 1080
            S SFT+KNE ESIIMAVKSLRKEARGWFNENA LH+GHD++ YARASAWYFVTYH+SY G
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSRYR 1104
            WY G  N+ HF+SFPWCVYDKLIRIKKRKI  R+R+R
Sbjct: 1081 WY-GEKNESHFLSFPWCVYDKLIRIKKRKIGARARHR 1114

BLAST of Sed0005964 vs. ExPASy TrEMBL
Match: A0A6J1K2Q9 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490531 PE=3 SV=1)

HSP 1 Score: 1876.3 bits (4859), Expect = 0.0e+00
Identity = 917/1117 (82.09%), Postives = 1001/1117 (89.62%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQLYGFP GV Q+SVK FVE FTG+G+IDAI  KRS+GRG R++AIIQF  +  AK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
            LIISLAN  L Y +S LKAREWK DI+  PLVFE NF+GL LHLGCQIS+E FFVLWTES
Sbjct: 61   LIISLANASLRYGTSSLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWTES 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            N+S++F FE+R L FFISHP VDYMLVLRY+NIWQV+LHKP GQ  S+DYLLIQLVGAPR
Sbjct: 121  NVSVNFEFERRDLKFFISHPLVDYMLVLRYENIWQVELHKPPGQ--SIDYLLIQLVGAPR 180

Query: 181  IYERDAKSFGPISQDPLLRFSMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFH 240
            IYERD K FG IS+DP L FS + DT WFRATDFTPSCCIGQS ALC+EIPYGRQLPNFH
Sbjct: 181  IYERDTKLFGHISEDPFLSFSKEMDTEWFRATDFTPSCCIGQSGALCLEIPYGRQLPNFH 240

Query: 241  DKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYAILFKINSLVQHGCLPGPA 300
            DKFA+FKEI GKFTL  GS+YSS+V LVPV+RP  SI+LPYAILFKIN LVQ GCLPGPA
Sbjct: 241  DKFAYFKEIKGKFTLATGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPA 300

Query: 301  LDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPPLLP 360
            LD SFY MVDPQ HNIAFID AL+KLY+LKECCYNPSKWL EEYRKYSK  NPP+PP L 
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLS 360

Query: 361  LNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTEL 420
            L+EGLVYVH+VQVTPC+VYF GPEVNVSNRVLRRY +YLDNFLRVSFVDEEL ++YSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDRLYSTEL 420

Query: 421  SPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSNRL--------------TA 480
            SPRESS+L DGKTKIFKRILSVLKDGITIGDKKFEFLAYSS++L              TA
Sbjct: 421  SPRESSSLGDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITA 480

Query: 481  ARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFS 540
            A+IRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEV+SD G+NYVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVESDAGINYVFS 540

Query: 541  DGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYEST 600
            DGIGKISASFA+ VA+KC IRHTPSAFQIRYAGFKGVISVDPTS +KLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCRIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQAL 660
            D KLDVLSWS+YHPC+LNRQLITLLSTLGV+D +FESKQKELIDQLDTIF +P+KAQQAL
Sbjct: 601  DMKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMNPLKAQQAL 660

Query: 661  ELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGC 720
            ELMSPGENTNILKEIISCGY PDSEPFL MMLHTFRE KLL+LRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC AHQQL +DHIIFK++KS+++FIVTGTVVVAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  NAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840
             AVDVP+LHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIP  QVEPMDYTP
Sbjct: 781  TAVDVPALHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPHQQVEPMDYTP 840

Query: 841  IPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSI 900
            + S+LLDHDVTMEEV EYFANYM+NDSLGII+NAHTAFAD  P+KAMS+ CIKLAKLFSI
Sbjct: 841  VLSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSWPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIMIKSLT 960
            AVDFPKTGVPALI +DLRV+ YPDFMDK DK  YKS N LGKLFRM+DDI P+I IKS+ 
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQRYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLTK 1020
            FTRE+ARQAYDPDMEVEGFEEYLDDAL++KN YDMRLGNLM+YYKIKTEAELISG SLTK
Sbjct: 961  FTREIARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHHSYCG 1080
            S SFT+KNE ESIIMAVKSLRKEARGWFNENA LH+GHD++ YARASAWYFVTYH+SY G
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSRYR 1104
            W+ G  N+ HF+SFPWCVYDKLIRIKKRKI  R+R+R
Sbjct: 1081 WF-GEKNESHFLSFPWCVYDKLIRIKKRKIGPRARHR 1114

BLAST of Sed0005964 vs. ExPASy TrEMBL
Match: E9NWK7 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G239640 PE=2 SV=1)

HSP 1 Score: 1866.7 bits (4834), Expect = 0.0e+00
Identity = 912/1117 (81.65%), Postives = 995/1117 (89.08%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQL+GFP GV Q+SVK FVE  TG GTIDAI TKRS+G G RV+AIIQFT EE AK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
             IIS A  RL Y +SYLKARE K DI+P PLVF+ NF+ LRLHLGCQISKESF VLWTES
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            N+S+DF FE R+L FFIS+P VDYMLVLRY+NIWQV+LHKP GQ  SVDYLLIQL GAPR
Sbjct: 121  NVSVDFGFELRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQ--SVDYLLIQLFGAPR 180

Query: 181  IYERDAKSFGPISQDPLLRFSMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFH 240
            IYERDA+SFG I++DP L FS + DT WFRATDFTPSC IGQSAALC+EIPYGRQLPNFH
Sbjct: 181  IYERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEIPYGRQLPNFH 240

Query: 241  DKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYAILFKINSLVQHGCLPGPA 300
            DKFA+FKEI GKFTLV+GS+YSS+V LVPV+ P  +INLPY ILFKIN LVQ GCLPGPA
Sbjct: 241  DKFAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPA 300

Query: 301  LDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPPLLP 360
            LD SFY MVD Q +N A IDHALKKL  LKECCYNPSKWLDEEYRKY K KNPP+PP+L 
Sbjct: 301  LDISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILT 360

Query: 361  LNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTEL 420
            LNEGLVYVH+VQVTPCKVYF GPEVN+SNRVLRRY DY+DNFLRVSFVDEELGKMYSTEL
Sbjct: 361  LNEGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTEL 420

Query: 421  SPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSS--------------NRLTA 480
            SPR SS+L DGKTKIFKRILSVL+DGITIGDKKFEFLAYSS              N LTA
Sbjct: 421  SPRASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTA 480

Query: 481  ARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFS 540
            A+IR+WMGDFH+IRNVAKYAARLGQSFGSSTET SVSRREV+VIPDIEV+S  GVNYVFS
Sbjct: 481  AKIRQWMGDFHNIRNVAKYAARLGQSFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFS 540

Query: 541  DGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYEST 600
            DGIGKI+ASFA+ VAKKCGIRHTPSAFQIRYAGFKGVISVDPTSS+KLSLRNSMLKYEST
Sbjct: 541  DGIGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQAL 660
            DTKLDVLSWSKYHPCFLNRQLITLLSTLGV+DHVFESKQ+ELID+LDTIF+DP+KAQQAL
Sbjct: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQAL 660

Query: 661  ELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGC 720
            ELMSPGENT ILKE++ CGY PDSEPFL MMLHTFRE KL++LR KSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVL 780
            LDET NLEYGEVFVQC AHQQL  D +IFK+ KS+R+FIVTGTVVVAKNPCLHPGDVRVL
Sbjct: 721  LDETRNLEYGEVFVQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  NAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840
             AVDVPSLHHM+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTP
Sbjct: 781  TAVDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  IPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSI 900
            +PS++LDHDVTMEEV EYFANYM+NDSLGII+NAHTAFADKEPKKAMS  CI+LAKLFSI
Sbjct: 841  VPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSI 900

Query: 901  AVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIM-IKSL 960
            AVDFPKTGVPALIP++LRV+EYPDFMDK DKV+Y+S+N LGKLFRM+D IGP I  I+S 
Sbjct: 901  AVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSF 960

Query: 961  TFTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLT 1020
             +T E+ARQ YDPDMEVEGFEEYLDDA+++KN YDMRLGNLM Y+KIKTEAELISGGSLT
Sbjct: 961  NYTPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLT 1020

Query: 1021 KSLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHHSYC 1080
             SLSFT KNE ESII+AVKSLRKEARGWFNE A LHYGH +++YARASAWYFVTYHH+Y 
Sbjct: 1021 SSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYW 1080

Query: 1081 GWYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSRY 1103
            GW +GR N GHF+SFPWCVYDKLIRIK RKIN R+RY
Sbjct: 1081 GWSDGRKNHGHFLSFPWCVYDKLIRIKHRKINCRARY 1115

BLAST of Sed0005964 vs. ExPASy TrEMBL
Match: H3K3Y9 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1854.7 bits (4803), Expect = 0.0e+00
Identity = 907/1117 (81.20%), Postives = 991/1117 (88.72%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQL+GFP GV Q+SVK FVE  TG GTIDAI TKRS+G G RV+AIIQFT EE AK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
             IIS A  RL Y +SYLKARE K DI+P PLVF+ NF+ LRLHLGCQISKESF VLWTES
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            N+S+DF F+ R+L FFIS+P VDYMLVLRY+NIWQV+LHKP GQ  SVDYLLIQL GAPR
Sbjct: 121  NVSVDFGFDVRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQ--SVDYLLIQLFGAPR 180

Query: 181  IYERDAKSFGPISQDPLLRFSMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFH 240
            IYERDA+SFG I++DP L FS + DT WFRATDFTPSC IGQSAALC+EI YGRQLPNFH
Sbjct: 181  IYERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEILYGRQLPNFH 240

Query: 241  DKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYAILFKINSLVQHGCLPGPA 300
            DKFA+FKEI GKFTLV+GS+YSS+V LVPV+ P  +INLPY ILFKIN LVQ GCLPGPA
Sbjct: 241  DKFAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPA 300

Query: 301  LDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPPLLP 360
            LD SFY MVD Q +N A IDHALKKL  LKECCYNPSKWLDEEYRKY K KNPP+PP+L 
Sbjct: 301  LDISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILT 360

Query: 361  LNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTEL 420
            LNEGLVYVH+VQVTPCKVYF GPEVN+SNRVLRRY DY+DNFLRVSFVDEELGKMYSTEL
Sbjct: 361  LNEGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTEL 420

Query: 421  SPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSS--------------NRLTA 480
            SPR SS+L DGKTKI KRILSVL+DGITIGDKKFEFLAYSS              N LTA
Sbjct: 421  SPRASSSLEDGKTKILKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTA 480

Query: 481  ARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFS 540
            A+IR+WMGDFH+IRNVAKYAARLGQ FGSSTET SVSRREV+VIPDIEV+S  GVNYVFS
Sbjct: 481  AKIRQWMGDFHNIRNVAKYAARLGQPFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFS 540

Query: 541  DGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYEST 600
            DGIGKI+ASFA+ VAKKCGIRHTPSAFQIRYAGFKGVISVDPTSS+KLSLRNSMLKYEST
Sbjct: 541  DGIGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQAL 660
            DTKLDVLSWSKYHPCFLNRQLITLLSTLGV+DHVFESKQ+ELID+LDTIF+DP+KAQQAL
Sbjct: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQAL 660

Query: 661  ELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGC 720
            ELMSPGENT ILKE++ CGY PDSEPFL MMLHTFRE KL++LR KSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVL 780
            LDET NLEYGEVF QC AHQQL  D +IFK+ KS+R+FIVTGTVVVAKNPCLHPGDVRVL
Sbjct: 721  LDETRNLEYGEVFWQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  NAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840
             AVDVPSLHHM+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTP
Sbjct: 781  TAVDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  IPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSI 900
            +PS++LDHDVTMEEV EYFANYM+NDSLGII+NAHTAFADKEPKKAMS  CI+LAKLFSI
Sbjct: 841  VPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSI 900

Query: 901  AVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIM-IKSL 960
            AVDFPKTGVPALIP++LRV+EYPDFMDK DKV+Y+S+N LGKLFRM+D IGP I  I+S 
Sbjct: 901  AVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSF 960

Query: 961  TFTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLT 1020
             +T E+ARQ YDPDMEVEGFEEYLDDA+++KN YDMRLGNLM Y+KIKTEAELISGGSLT
Sbjct: 961  NYTPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLT 1020

Query: 1021 KSLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHHSYC 1080
             SLSFT KNE ESII+AVKSLRKEARGWFNE A LHYGH +++YARASAWYFVTYHH+Y 
Sbjct: 1021 SSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYW 1080

Query: 1081 GWYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSRY 1103
            GW +GR N GHF+SFPWCVYDKLIRIK RKIN R+RY
Sbjct: 1081 GWSDGRKNHGHFLSFPWCVYDKLIRIKHRKINCRARY 1115

BLAST of Sed0005964 vs. ExPASy TrEMBL
Match: A0A0S1YCZ7 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1b PE=2 SV=1)

HSP 1 Score: 1853.2 bits (4799), Expect = 0.0e+00
Identity = 908/1117 (81.29%), Postives = 991/1117 (88.72%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQL+GFP GV Q+SVK FVE  TG GTIDAI TKRS+G G RV+AIIQFT EE AK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
             IIS A  RL Y +SYLKARE K DI+P PLVF+ NF+ LRLHLGCQISKESF VLWTES
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            N+S+DF FE R+L FFIS+P VDYMLVLRY+NIWQV+LHKP GQ  SVDYLLIQL GAPR
Sbjct: 121  NVSVDFGFELRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQ--SVDYLLIQLFGAPR 180

Query: 181  IYERDAKSFGPISQDPLLRFSMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFH 240
            IYERDA+SFG I++DP L FS + DT WFRATDFTPSC IGQSAALC+EIPYGRQLPNFH
Sbjct: 181  IYERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEIPYGRQLPNFH 240

Query: 241  DKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPSPSINLPYAILFKINSLVQHGCLPGPA 300
            DKFA+FKEI GKFTLV+GS+YSS+V LVPV+ P  +INLPY ILFKIN LVQ GCLPGPA
Sbjct: 241  DKFAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPA 300

Query: 301  LDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPPLLP 360
            LD SFY MVD Q +N A IDHALKKL  LKECCYNPS WLDEEYRKY K KNPP+PP+L 
Sbjct: 301  LDISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSIWLDEEYRKYFKLKNPPQPPILT 360

Query: 361  LNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTEL 420
            LNEGLVYVH+VQVTPCKVYF GPEVN+SNRVLRR  DY+DNFLRVSFVDEELGKMYSTEL
Sbjct: 361  LNEGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRCPDYIDNFLRVSFVDEELGKMYSTEL 420

Query: 421  SPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSS--------------NRLTA 480
            SPR SS+L DGKTKIFKRILSVL+DGITIGDKKFEFLAYSS              N LTA
Sbjct: 421  SPRASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTA 480

Query: 481  ARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNYVFS 540
            A+IR+WMGDFH+IRNVAKYAARLGQSFGSSTET SVSRREV+VIPDIEV+S  GVNYVFS
Sbjct: 481  AKIRQWMGDFHNIRNVAKYAARLGQSFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFS 540

Query: 541  DGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLKYEST 600
            DGIGKI+ASFA+ VAKKCGIRHTPSAFQIRYAGFKGVISVDPTSS+KLSLRNSMLKYEST
Sbjct: 541  DGIGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQAL 660
            DTKLDVLSWSKYHPCFLNRQLIT LSTLGV+DHVFESKQ+ELID+LDTIF+DP+KAQQAL
Sbjct: 601  DTKLDVLSWSKYHPCFLNRQLITFLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQAL 660

Query: 661  ELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGC 720
            ELMSPGENT ILKE++ CGY PDSEPFL MMLHTFRE KL++LR KSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVL 780
            LDET NLEYGEVFVQC AHQQL  D +IFK+ KS+R+FIVTGTVVVAKNPCLHPGDVRVL
Sbjct: 721  LDETRNLEYGEVFVQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  NAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840
             AVDVPSLHHM+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTP
Sbjct: 781  TAVDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  IPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAKLFSI 900
            +PS++LDHDVTMEEV EYFANYM+NDSLGII+NAHTAFADKEPKKAMS  CI+LAKLFSI
Sbjct: 841  VPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSI 900

Query: 901  AVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIM-IKSL 960
            AVDFPKTGVPALIP++LRV+EYPDFMDK DKV+Y+S+N LGKLFRM+D IGP I  I+S 
Sbjct: 901  AVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSF 960

Query: 961  TFTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGGSLT 1020
             +T E+ARQ YDPDMEVEGFEEYLDDA+++KN YDMRLGNLM Y+KIKTEAELISGGSLT
Sbjct: 961  NYTPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLT 1020

Query: 1021 KSLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHHSYC 1080
             SLSFT KNE ESII+AVKSLRKEARGWFNE A LHYGH +++YARASAWYFVTYHH+Y 
Sbjct: 1021 SSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYW 1080

Query: 1081 GWYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSRY 1103
            GW +GR N GHF+SFP CVYDKLIRIK RKIN R+RY
Sbjct: 1081 GWSDGRKNHGHFLSFPRCVYDKLIRIKHRKINCRARY 1115

BLAST of Sed0005964 vs. TAIR 10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1 )

HSP 1 Score: 1276.5 bits (3302), Expect = 0.0e+00
Identity = 648/1119 (57.91%), Postives = 815/1119 (72.83%), Query Frame = 0

Query: 1    MGKTIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGRGGRVFAIIQFTGEEAAK 60
            MGKTIQ++GFP GVS + VK+F+E  TG GT+ AIK ++ +  G RV+AI+QFT E   +
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   LIISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKESFFVLWTES 120
            LII+ A  RL Y  SYLKA E + DI+P P        GL++  GCQ+S + F  LW+  
Sbjct: 61   LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120

Query: 121  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 180
            ++ + F    R+L F  S    DY L L Y+NIWQ+DLH PQG+S    +L+IQ++GAP+
Sbjct: 121  DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSK--FLVIQVIGAPK 180

Query: 181  IYERDAKSFGPISQDPLLRFSMD-NDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNF 240
            I+E++ +    +    ++ F  D +D  W R TDFT S CIGQS A C+E+P    +P+F
Sbjct: 181  IFEKEDQPINLLF--GIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDF 240

Query: 241  HDKFAFFKE-IMGKFTLVNGSSYSSDVK-LVPVLRPSPSINLPYAILFKINSLVQHGCLP 300
             + FA + E     F + +GSSYSS+   LVPV+ P P  +LP+ ILFK+N+LVQ+ CL 
Sbjct: 241  RENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLS 300

Query: 301  GPALDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRKYSKSKNPPRPP 360
            GPALD  FY +++ +K++ A IDH L+KL+ L ECCY P+ WL +EY+K+      P  P
Sbjct: 301  GPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSP 360

Query: 361  LLPLNEGLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYS 420
             + L++GLVY+++VQVTP +VYFSGPEVNVSNRVLR YS Y++NFLRVSFVDE+L K+ S
Sbjct: 361  TISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRS 420

Query: 421  TELSPRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSS--------------NR 480
             +LSPR S+     +TK++ RI SVL+DGI IGDKKFEFLA+SS              +R
Sbjct: 421  MDLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDR 480

Query: 481  LTAARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDVGVNY 540
            +TAA IR WMGDF  IRNVAKYAARLGQSF SS ET +V   E+EVIPD+E+ S +G  Y
Sbjct: 481  ITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIIS-LGTRY 540

Query: 541  VFSDGIGKISASFAKNVAKKCGI-RHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNSMLK 600
            VFSDGIGKISA FA+ VA+KCG+   +PSAFQIRY G+KGV++VDP SS KLSLR SM K
Sbjct: 541  VFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSK 600

Query: 601  YESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKA 660
            +ES +TKLDVL+WSKY PC++NRQLITLLSTLGV D VFE KQ+E++D+LD I T P++A
Sbjct: 601  FESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEA 660

Query: 661  QQALELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPNGRA 720
             +AL LM+PGENTNILK +I CGY PD+EPFLSMML  FR  KLL+LR K+RIFI  GR+
Sbjct: 661  HEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRS 720

Query: 721  MMGCLDETGNLEYGEVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGD 780
            MMGCLDET  LEYG+V VQ        SD +     +  R FI+TG VVVAKNPCLHPGD
Sbjct: 721  MMGCLDETRTLEYGQVVVQ-------YSDPM-----RPGRRFIITGPVVVAKNPCLHPGD 780

Query: 781  VRVLNAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPM 840
            VRVL AV+VP+L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +L+PP   EPM
Sbjct: 781  VRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPM 840

Query: 841  DYTPIPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQCIKLAK 900
            DYTP P+++LDHDVT+EEV EYFANY++NDSLGII+NAHTAFADKEP KA S  CI+LAK
Sbjct: 841  DYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAK 900

Query: 901  LFSIAVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDIGPKIMI 960
             FS AVDFPKTGV A+IP  L V+EYPDFM+K DK +Y+S N +GKLFR V +  P  +I
Sbjct: 901  KFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPP-LI 960

Query: 961  KSLTFTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKIKTEAELISGG 1020
               +FT +VA ++YD DMEV+GFEEY+D+A + K  YD +LGNLM YY IKTEAE++SGG
Sbjct: 961  SIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGG 1020

Query: 1021 SLTKSLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARASAWYFVTYHH 1080
             +  S SFT++ + ESI  AV++LRKE    FN +       + +  A+ASAWY VTYH 
Sbjct: 1021 IMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASE-----EEENESAKASAWYHVTYHS 1080

Query: 1081 SYCGWYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRSR 1102
            SY G Y    N+ HF+SF WCVYDKL+RIKK  +  R R
Sbjct: 1081 SYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQR 1093

BLAST of Sed0005964 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 725.7 bits (1872), Expect = 5.6e-209
Identity = 417/1133 (36.80%), Postives = 653/1133 (57.63%), Query Frame = 0

Query: 4    TIQLYGFPPGVSQDSVKRFVEVFTGKGTIDAIKTKRSQGR-GGRVFAIIQFTG-EEAAKL 63
            T+++   P  +  D + RF+E+  G+ T+ A++   ++     R FA +QFT  E  ++ 
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70

Query: 64   IISLANGRLVYSSSYLKAREWKPDIIPGPLVFECNFEGLRLHLGCQISKES-FFVLWTES 123
             +  +  +L++ +  L+  E   DIIP P+      + + L +G   S E  F  L    
Sbjct: 71   QLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKWD 130

Query: 124  NISMDFRFEQRQLMFFISHPDVDYMLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPR 183
             +      E+R++ F++      Y + +R+++I +       G +  +D  L++L   P+
Sbjct: 131  GVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPK 190

Query: 184  IYERDAKSFGPISQDPLLRF-SMDNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNF 243
            +++R         +    RF   D D  W R TDF+ S  IG S   C+E+  G  + + 
Sbjct: 191  VFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDI 250

Query: 244  HDKFAFFKEIMGKFTLVNGSSYSSDVKLVPVLRPS-PSINLPYAILFKINSLVQHGCLP- 303
                 +++E     T V+G +++S  ++VP+L  +   +  PY ILF++N+LV    +  
Sbjct: 251  FSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKISL 310

Query: 304  GPALDNSFYHMVDPQKHNIAFIDHALKKLYELKECCYNPSKWLDEEYRK-YSKSKNPPRP 363
              A D     ++       A +   LKKL++    CY+P  ++  + +    K K+ P  
Sbjct: 311  FAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPAS 370

Query: 364  PLLPLNE-GLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKM 423
                L E  ++   +  VTP K+Y  GPE+  +N V++ +++++ +F+RV+FV+E+  K+
Sbjct: 371  AYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKL 430

Query: 424  YSTELS--PRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSNRL--------- 483
             +  LS   +E   +   +T I+ R+LS+L +GIT+G K+FEFLA+S+++L         
Sbjct: 431  PANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFA 490

Query: 484  -----TAARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVQSDV 543
                  A  IR+WMG F  IR+++K AAR+GQ F +S +T  V  ++VE IPDIEV +D 
Sbjct: 491  SNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTD- 550

Query: 544  GVNYVFSDGIGKISASFAKNVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSIKLSLRNS 603
            G +Y FSDGIGKIS +FAK VA+KCG+ H PSAFQIRY G+KGVI+VD +S  KLSLR+S
Sbjct: 551  GADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDS 610

Query: 604  MLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDP 663
            MLK++S +  L+V  W++  PCFLNR++I LLSTLG+ED +FE+ Q   +  L  +  D 
Sbjct: 611  MLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDR 670

Query: 664  IKAQQALELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFIPN 723
              A   L+ +S   + N+L +++  GY+P SEP+LSMML    E +L +L+ + RI +P 
Sbjct: 671  DAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPK 730

Query: 724  GRAMMGCLDETGNLEYGEVFVQ-CYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCL 783
            GR ++GC+DE G LEYG+V+V+      +L+S    + +   +   +V G VVV KNPCL
Sbjct: 731  GRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCL 790

Query: 784  HPGDVRVLNAVDVPSLHH--MVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPP 843
            HPGD+RVL+A+          +DC++FPQKG RPHPNECSG DLDGD +FV WD  +IP 
Sbjct: 791  HPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPS 850

Query: 844  LQVEPMDYTPIPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKAMSKQ 903
                PMDY     +L+DHDVT+EE+H++F +YMI+D+LG+IS AH   AD++P+KA S++
Sbjct: 851  EMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQK 910

Query: 904  CIKLAKLFSIAVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRMVDDI 963
            C++LA L S AVDF KTG PA +P  L+  E+PDF+++ +K +Y S++  GKL+R V   
Sbjct: 911  CLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVK-- 970

Query: 964  GPKIMIKSLTFTREVARQ----AYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKI 1023
                   SL   +  A      AYD  +E  GFE +++ A  +++ Y  +L +LM YY  
Sbjct: 971  ------SSLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGA 1030

Query: 1024 KTEAELISGGSLTKSLSFTQKNE-----VESIIMAVKSLRKEARGWFNENAALHYGHDSD 1083
              E E+++G   TK +   + N       + I ++VK L KEA GWF ++       +  
Sbjct: 1031 ANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCE----DEQQ 1090

Query: 1084 MYARASAWYFVTYHHSYCGWYEGRNNQGHFISFPWCVYDKLIRIKKRKINDRS 1101
                ASAWY+VTY+ ++      R+ +  F+SFPW V D L+ IK      +S
Sbjct: 1091 KKKLASAWYYVTYNPNH------RDEKLTFLSFPWIVGDVLLDIKAENAQRQS 1122

BLAST of Sed0005964 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 557.8 bits (1436), Expect = 2.0e-158
Identity = 387/1077 (35.93%), Postives = 561/1077 (52.09%), Query Frame = 0

Query: 99   GLRLHLGCQISKESFFVLWTESNI---------SMDFRFEQRQLMFF---ISHP--DVDY 158
            G+ L +G  +S++ FFV W    +         +  F F +     F   + H   + DY
Sbjct: 134  GITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDY 193

Query: 159  MLVLRYDNIWQVDLHKPQGQSVSVDYLLIQLVGAPRIYERDAKS--FGPISQDPLLRFSM 218
             L L   +I  V  +K     V    L++QL  +PR++ R A    +  +  D L     
Sbjct: 194  KLELLVRDIQTVRQYKTLHGFV----LILQLASSPRVWYRTADDDIYDTVPGDLL----- 253

Query: 219  DNDTNWFRATDFTPSCCIGQSAALCVEIPYGRQLPNFHDKFAFFKEIMGKFTLVNGSSYS 278
            D+D  W R TDFT    IG+  +  V I      P + +K    +  +  F +       
Sbjct: 254  DDDDPWIRTTDFTQVGAIGRCHSYRVLIS-----PRYENK---LRTALDYFRM--RRVQE 313

Query: 279  SDVKLVPVLRPSPSINLP---------------YAILFKINSLVQHGCLPGPALDNSFYH 338
              V+  P +R  P    P               + I+F +NS++  G      L   F+ 
Sbjct: 314  ERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFD 373

Query: 339  MV--DPQKHNIAFIDHALKKLYELKECCYNPSKWLD--EEYRKYSKSKNPPRPPLLPLNE 398
            ++   P+  NIA    +LK L   K   ++  K L   +E+ +    KNP        +E
Sbjct: 374  LLRNQPKDVNIA----SLKHLCTYKRPVFDAYKRLKLVQEWIQ----KNPKLLGSHEQSE 433

Query: 399  GLVYVHKVQVTPCKVYFSGPEVNVSNRVLRRYSDYLDNFLRVSFVDEELGKMYSTELS-- 458
             +  + ++ +TP + Y   PEV +SNRVLRRY    + FLRV+F+DE +  + S  LS  
Sbjct: 434  DISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYF 493

Query: 459  -----PRESSTLIDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSNRL------------ 518
                    +S+    KT +FKR+ S+L DG  +  +K+ FLA+S+N+L            
Sbjct: 494  VAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDG 553

Query: 519  --TAARIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEV-IPDIEVQSDVGV 578
                + I+ WMG F   +NVAK AAR+G  F S+  T  V   EV+  +PDIE       
Sbjct: 554  KTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERN----- 613

Query: 579  NYVFSDGIGKISASFAKNVAK--KCGIRHTPSAFQIRYAGFKGVISVDPTSS--IKLSLR 638
             YVFSDGIG I+   A  V +  K  + ++P A+QIRYAGFKGV++  P+ S  I+L+LR
Sbjct: 614  GYVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALR 673

Query: 639  NSMLKYESTDTKLDVLSWSKYHPCFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFT 698
            +SM K+ S  T L++ SW+++ P FLNRQ+ITLLS LGV D +F   Q+ ++ +L+ I  
Sbjct: 674  DSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILD 733

Query: 699  DPIKAQQALELMSPGENTNILKEIISCGYSPDSEPFLSMMLHTFRELKLLDLRRKSRIFI 758
            D   A + L   S  E  N    ++S G+ P +EP L  ML + R  +L  LR KSRIF+
Sbjct: 734  DTDVAFEVL-TASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFV 793

Query: 759  PNGRAMMGCLDETGNLEYGEVFVQCY--AHQQLQSDH-IIFKKNKSDRYFIVTGTVVVAK 818
             +GR +MGCLDE G LE+G+ F+Q    + +   S H   FK+ K+D   +V G V +AK
Sbjct: 794  TSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTD-LEVVKGYVAIAK 853

Query: 819  NPCLHPGDVRVLNAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLI 878
            NPCLHPGDVR+L AVDVP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD  LI
Sbjct: 854  NPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLI 913

Query: 879  PP--LQVEPMDYTPIPSKLLDHDVTMEEVHEYFANYMINDSLGIISNAHTAFADKEPKKA 938
            PP       M Y     K L   V  +++ ++FA  + N+ LG I NAH   AD+    A
Sbjct: 914  PPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGA 973

Query: 939  MSKQCIKLAKLFSIAVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRM 998
            M ++C+ LA+L + AVDFPKTG    +P  L+ + YPDFM K+D  +YKS+  LG+L+R 
Sbjct: 974  MDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRR 1033

Query: 999  VDDIGPKIMIKSLTFTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKI 1058
            V ++  +    S   + + +   YD  +E+ GFE+ + +A  +K  YD +L  L+  YK+
Sbjct: 1034 VKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKV 1093

Query: 1059 KTEAELISG--GSLTKSLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSD--- 1095
            + E E+++G   S+ K  S  Q    E +  +  SL+KE R  F E    H     +   
Sbjct: 1094 QKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKN 1153

BLAST of Sed0005964 vs. TAIR 10
Match: AT2G19910.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 125.6 bits (314), Expect = 2.5e-28
Identity = 147/551 (26.68%), Postives = 237/551 (43.01%), Query Frame = 0

Query: 553  FQIRYAGF--KGVISVDPTSSIK-LSLRNSMLK-YE-------STDTKLDVLSWSK-YHP 612
            F+I Y G+  KG    +     + + +R SM+K YE       ST   L+V++ S     
Sbjct: 455  FRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRK 514

Query: 613  CFLNRQLITLLSTLGVEDHVFESKQKELIDQLDTIFTDPIKAQQALELMSPGENTNILKE 672
              L+R L+ LLS  GV +  F +  +  +++  TIF     A +A       + T    +
Sbjct: 515  ARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYGDDQYT---AD 574

Query: 673  IISCGYSPDSEPF----LSMMLHTFRELKLLDLRRKSRIFIPNGRAMMGCLDETGNLEYG 732
            +I  G  P  EP+    LS +L T R     +  +  R  I     +MG +D TG L+  
Sbjct: 575  MILVGI-PLDEPYLKDRLSYLLKTER-----NALKAGRFPIDESYYIMGTVDPTGELKEN 634

Query: 733  EVFVQCYAHQQLQSDHIIFKKNKSDRYFIVTGTVVVAKNPCLHPGDVRVLNAVDVPSLHH 792
            E+ V  ++ Q                   ++G V+V +NP LH GD+ VL A  V +L  
Sbjct: 635  EICVILHSGQ-------------------ISGDVLVYRNPGLHFGDIHVLKATYVKALED 694

Query: 793  MVD----CVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPLQ-VEPMDYTPIPSKL 852
             V      V FPQKGPR   +E +G D DGD+YF+  +P L+   +  EP   +  PSK+
Sbjct: 695  YVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKI 754

Query: 853  --------LDHDVTMEEVHEYF--ANYMINDSLGIISNAHTAFAD---------KEPKKA 912
                    L  +   EE+ + F  A +   D +G+ ++      D          + K  
Sbjct: 755  YCGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYE 814

Query: 913  MSKQCIKLAKLFSIAVDFPKTGVPALIPSDLRVEEYPDFMDKDDKVSYKSDNALGKLFRM 972
              K  +KL  ++  A+D PK G    +P DL ++ +P +M++D K  ++S + LG +F  
Sbjct: 815  RKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDT 874

Query: 973  VDDIGPKIMIKSLTFTREVARQAYDPDMEVEGFEEYLDDALHYKNYYDMRLGNLMRYYKI 1032
            VD    +    S     E+++  Y  D  V   + ++D    +   Y   +   M     
Sbjct: 875  VDSHNAEEPPPS-----EISKLWYFEDEPVP--KSHMDKFTSWYENYRSEMSQAM----- 934

Query: 1033 KTEAELISGGSLTKSLSFTQKNEVESIIMAVKSLRKEARGWFNENAALHYGHDSDMYARA 1064
              E + +    LT        NEV   I   K     A G+ + N +L      ++Y +A
Sbjct: 935  -METDKVKRNQLT--------NEV---IQRYKQDFYGAAGFEDSNKSL-----EELYPQA 948

BLAST of Sed0005964 vs. TAIR 10
Match: AT2G19920.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-26
Identity = 142/523 (27.15%), Postives = 228/523 (43.59%), Query Frame = 0

Query: 477 HSIRNVAKYAARLGQSFGSSTETASVSRREVEV--IPDI--------EVQSDVGVNYVFS 536
           H++ + A Y AR      S T+   V   E+ V  I DI        +V    G   + S
Sbjct: 345 HTLPSPANYMARFSLIL-SKTKKLEVDMTEITVMQIDDIHCHDQSNNDVLDKNGKPRIHS 404

Query: 537 DGIGKISASFAK---------------NVAKKCGIRHTPSAFQIRY----AGFKGVISVD 596
           DG G IS   A+               N+   C ++  P   QIR     +  KG+  ++
Sbjct: 405 DGTGYISEDLARMCPLNIFKGKSMRSNNIQGTC-VQEPPLLIQIRMFNDGSAVKGIFLLN 464

Query: 597 ---PTSSIKLSLRNSMLK-YE-------STDTKLDVLSWSK-YHPCFLNRQLITLLSTLG 656
              P  +++  +R SM+K Y+       ST   L+V++ S       L++ L+ LLS  G
Sbjct: 465 KNLPPQTVQ--VRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPPKRAKLSKNLVALLSYGG 524

Query: 657 VEDHVFESKQKELIDQLDTIFTDPIKAQQALELMSPGENTNILKEIISCGYSPDSEPFLS 716
           V +  F       +++  TIF     A +A       ++ N L+ I++    P  EP+L 
Sbjct: 525 VPNDFFLDILLNTLEKKKTIFFKVRAAGKAALHYGNMDDKNALQMIMA--GIPLDEPYLK 584

Query: 717 MMLHTFRELKLLDLRRKSRIFIPNGRAMMGCLDETGNLEYGEVFVQCYAHQQLQSDHIIF 776
             L    +L+  DL +  ++ I     +MG +D TG L+  E  V   A  Q        
Sbjct: 585 HYLSKLLKLEKDDL-KAGKLPIDESYYLMGTVDPTGELKEDE--VSGLAKSQ-------- 644

Query: 777 KKNKSDRYFIVTGTVVVAKNPCLHPGDVRVLNAVDVPSLHHMVD----CVVFPQKGPRPH 836
                         V+V +NP LH GD+ +L A  V SL   V      V FPQKGPR  
Sbjct: 645 -------------DVLVYRNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQKGPRSL 704

Query: 837 PNECSGSDLDGDIYFVCWDPDLI-------PPLQVEPMD--YTPIPSKLLDHDVTMEEVH 896
            +E +G D DGD+YF+  +P L+       P +   P    YT      L  +   EE+ 
Sbjct: 705 GDEIAGGDFDGDMYFISRNPKLLEHYKPSEPWVSSSPRSKIYTGRQPSELSPEQLEEELF 764

Query: 897 EYF--ANYMINDSLGIISNAHTAFADK---------EPKKAMSKQCIKLAKLFSIAVDFP 935
           + F    +  +  +G  +++  A  D+         + K  M K+ +KL  ++  A+D P
Sbjct: 765 KIFLKTGFSPSSVIGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKLTDIYYDAIDAP 824