Sed0005913 (gene) Chayote v1

Overview


Name	Sed0005913
Type	gene
Organism	Sechium edule (Chayote v1)
Description	V-type proton ATPase proteolipid subunit
Location	LG03: 11109719 .. 11111347 (+)
RNA-Seq Expression	Sed0005913
Synteny	Sed0005913

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCGATAAGAATTTATTAGACGGTACAATCTTTAAAATTAGAATACAAAATTAAAAAAGAAATTATAAAAGTATTCCTTTGAGATCTATCATTAAAATTCAGATATAGGTTTAGCCTTTTCCTAACTCAAAAAATAAAGGGTTTAACTTTAATAGAATAAAAGGCAGAGAAAAAGGCCCAAAACAAAAAACACCTTTGCATCTGAAAAAAAAAACACAAATCCCAAGCTTCTAATCGGAAAAAATGGCGTCAACATTCAACGGCGATGAAACGGCACCGTTTTTCGGCTTTCTCGGCGCCGCTGCGGCCCTGGTTTTCGCCTGTAAGTTAAATTTACATACAATGTGATTGATTACAAATGTACACATGTATATCGATCTCGCAATGGAATTTCATCGGATTCGGGTTTGTTGTTGTTGTTTAACTAGGTATGGGAGCCGCTTACGGGACGGCGAAGAGCGGCGTCGGAGTGGCGTCCATGGGAGTGATGAAGCCGGAATTGGTGATGAAATCGATTGTTCCGGTGGTTATGGCCGGAGTTTTGGGGATTTATGGTTTGATTATTGCTGTGATTATTAGTACAGGGATTAACCCTAAGGCTAAACCCTATTACCTCTTCGATGGCTTCGCTCATCTCTCCGGTGGTCTTTCTTGTGGCCTCGCTTCTCTCGCTTCCGGCATGACTATCGGCATCGTCGGCGATGTCGGCGTTAGGTACTTTCTTTTTATCTATTTTAGCTCGCCTCTACGAATTTTGATCCGATATTCTTCATTTTGTTTTGTAATCACGTCCGTCCCTAGGCCAAATAGTTGGAGATATTAAAGGAATAAAAATACGGGATGATTCTATTATAATAACACTTATATATTCAACATAAACTATAGAACTAACACTTAATTAGATGATGATAAATATTAAGAACCTACTATATAAATATTGATAATAATAAATAGGGTTACACAATACCATAGCCATTTCGTTTGAGAAGGCTAAACTCTTCCAACTTATTGAACAAGAAAACAATGACCAAAATAATCCTTAAGAACCTCAACTACTCTATTTAAACTAAAAAACTAGATTCTAAACCCTAAACCCTAAATTTTAGTTTTCTACCGTTATTTCCATCAATTGTTTAGTGCCTCCTTGTGAATAGTCTTTCCAACTTGCTTACTGTTGATGTCTGCTATTGGTATTAAAAAAAAACTTAGATATCATGTTTTACTTCAATGAAAATTAGTTTGCATCTTTTTTTTTTTTTTGTGAATTCCTACCTATTTTGGGTAAGGGATTCAAACTCATAATCTCTTGTTATTATATCATATATCATGTCTGTTCAGCTTAATGTCTGTTAGTAGTTAGACTATTAATTATAATATAAATCAAGCACTTCATCATCCGTTGAACTCAGCTCTTGTTGGCAGTTCAACTAAACAAGCACTTTTGATTTAGAGCAGTAGAATGAAATTAGCATCTAATTGTATTTGTGTTTTGGTACAGGGCCAATGCACAACAACCTAAACTTTTTGTTGGGATGATTCTGATTCTGATTTTCGCGGAAGCACTAGCCCTTTATGGACTTATTGTTGGTATTATTCTCTCATCGCGAGCCGGTCAGTCGAGAGCTTAA

mRNA sequence

ATCCGATAAGAATTTATTAGACGGTACAATCTTTAAAATTAGAATACAAAATTAAAAAAGAAATTATAAAAGTATTCCTTTGAGATCTATCATTAAAATTCAGATATAGGTTTAGCCTTTTCCTAACTCAAAAAATAAAGGGTTTAACTTTAATAGAATAAAAGGCAGAGAAAAAGGCCCAAAACAAAAAACACCTTTGCATCTGAAAAAAAAAACACAAATCCCAAGCTTCTAATCGGAAAAAATGGCGTCAACATTCAACGGCGATGAAACGGCACCGTTTTTCGGCTTTCTCGGCGCCGCTGCGGCCCTGGTTTTCGCCTGTATGGGAGCCGCTTACGGGACGGCGAAGAGCGGCGTCGGAGTGGCGTCCATGGGAGTGATGAAGCCGGAATTGGTGATGAAATCGATTGTTCCGGTGGTTATGGCCGGAGTTTTGGGGATTTATGGTTTGATTATTGCTGTGATTATTAGTACAGGGATTAACCCTAAGGCTAAACCCTATTACCTCTTCGATGGCTTCGCTCATCTCTCCGGTGGTCTTTCTTGTGGCCTCGCTTCTCTCGCTTCCGGCATGACTATCGGCATCGTCGGCGATGTCGGCGTTAGGGCCAATGCACAACAACCTAAACTTTTTGTTGGGATGATTCTGATTCTGATTTTCGCGGAAGCACTAGCCCTTTATGGACTTATTGTTGGTATTATTCTCTCATCGCGAGCCGGTCAGTCGAGAGCTTAA

Coding sequence (CDS)

ATGGCGTCAACATTCAACGGCGATGAAACGGCACCGTTTTTCGGCTTTCTCGGCGCCGCTGCGGCCCTGGTTTTCGCCTGTATGGGAGCCGCTTACGGGACGGCGAAGAGCGGCGTCGGAGTGGCGTCCATGGGAGTGATGAAGCCGGAATTGGTGATGAAATCGATTGTTCCGGTGGTTATGGCCGGAGTTTTGGGGATTTATGGTTTGATTATTGCTGTGATTATTAGTACAGGGATTAACCCTAAGGCTAAACCCTATTACCTCTTCGATGGCTTCGCTCATCTCTCCGGTGGTCTTTCTTGTGGCCTCGCTTCTCTCGCTTCCGGCATGACTATCGGCATCGTCGGCGATGTCGGCGTTAGGGCCAATGCACAACAACCTAAACTTTTTGTTGGGATGATTCTGATTCTGATTTTCGCGGAAGCACTAGCCCTTTATGGACTTATTGTTGGTATTATTCTCTCATCGCGAGCCGGTCAGTCGAGAGCTTAA

Protein sequence

MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA

Homology

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BLAST of Sed0005913 vs. NCBI nr
Match: ADQ53511.1 (VAH protein [Phyllostachys edulis])

HSP 1 Score: 283.9 bits (725), Expect = 8.9e-73
Identity = 152/164 (92.68%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           M+STF+GDETAPFFGFLGAAAAL+F+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAKPYYLFDG+AHLS GLSCGLA L++GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLSCGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. NCBI nr
Match: XP_020180409.1 (V-type proton ATPase 16 kDa proteolipid subunit [Aegilops tauschii subsp. strangulata] >XP_037470413.1 V-type proton ATPase 16 kDa proteolipid subunit-like [Triticum dicoccoides] >XP_037480975.1 V-type proton ATPase 16 kDa proteolipid subunit-like [Triticum dicoccoides] >KAF6981777.1 hypothetical protein CFC21_000232 [Triticum aestivum] >KAF6992859.1 hypothetical protein CFC21_009814 [Triticum aestivum])

HSP 1 Score: 283.9 bits (725), Expect = 8.9e-73
Identity = 153/164 (93.29%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           MASTF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAKPY+LFDG+AHLS GL+CGLA LA+GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. NCBI nr
Match: KAF0932236.1 (hypothetical protein E2562_008743 [Oryza meyeriana var. granulata])

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72
Identity = 153/163 (93.87%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 2   ASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVVM 61
           ASTF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVVM
Sbjct: 4   ASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 63

Query: 62  AGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVGV 121
           AGVLGIYGLIIAVIISTGINPKAKPYYLFDG+AHLS GL+CGLA LA+GM IGIVGD GV
Sbjct: 64  AGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGV 123

Query: 122 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 124 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 166

[Close]

BLAST of Sed0005913 vs. NCBI nr
Match: KAG8059027.1 (hypothetical protein GUJ93_ZPchr0002g23873 [Zizania palustris])

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72
Identity = 153/163 (93.87%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 2   ASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVVM 61
           ASTF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVVM
Sbjct: 3   ASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 62

Query: 62  AGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVGV 121
           AGVLGIYGLIIAVIISTGINPKAKPYYLFDG+AHLS GL+CGLA LA+GM IGIVGD GV
Sbjct: 63  AGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGV 122

Query: 122 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 123 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165

[Close]

BLAST of Sed0005913 vs. NCBI nr
Match: KZV18860.1 (V-type proton ATPase 16 kDa proteolipid subunit [Dorcoceras hygrometricum])

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72
Identity = 154/164 (93.90%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           MASTF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAK YYLFDG+AHLS GLSCGLA LA+GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLSCGLAGLAAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. ExPASy Swiss-Prot
Match: P59228 (V-type proton ATPase subunit c2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c2 PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 7.6e-75
Identity = 152/164 (92.68%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           MASTF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAK YYLFDG+AHLS GL+CGLA L++GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. ExPASy Swiss-Prot
Match: P23957 (V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa OX=4498 GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 9.9e-75
Identity = 151/164 (92.07%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           M+S F+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MSSVFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAKPY+LFDG+AHLS GL+CGLA LA+GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. ExPASy Swiss-Prot
Match: A2ZBW5 (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica OX=39946 GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 9.9e-75
Identity = 150/164 (91.46%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           M+S F+GDETAPFFGFLGAA+AL+F+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MSSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAKPYYLFDG+AHLS GL+CGLA LA+GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. ExPASy Swiss-Prot
Match: Q0IUB5 (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica OX=39947 GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 9.9e-75
Identity = 150/164 (91.46%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           M+S F+GDETAPFFGFLGAA+AL+F+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MSSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAKPYYLFDG+AHLS GL+CGLA LA+GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. ExPASy Swiss-Prot
Match: Q43434 (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum OX=3635 GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.7e-74
Identity = 151/164 (92.07%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           M+STF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAK YYLFDG+AHLS GL+CGLA L++GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. ExPASy TrEMBL
Match: A0A1D5T1X1 (V-type proton ATPase proteolipid subunit OS=Triticum aestivum OX=4565 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.3e-73
Identity = 153/164 (93.29%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           MASTF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAKPY+LFDG+AHLS GL+CGLA LA+GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. ExPASy TrEMBL
Match: E5G3F9 (V-type proton ATPase proteolipid subunit OS=Phyllostachys edulis OX=38705 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.3e-73
Identity = 152/164 (92.68%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           M+STF+GDETAPFFGFLGAAAAL+F+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAKPYYLFDG+AHLS GLSCGLA L++GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLSCGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. ExPASy TrEMBL
Match: A0A452XKH4 (V-type proton ATPase proteolipid subunit OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.3e-73
Identity = 153/164 (93.29%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           MASTF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAKPY+LFDG+AHLS GL+CGLA LA+GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. ExPASy TrEMBL
Match: A0A6G1F5P2 (V-type proton ATPase proteolipid subunit OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_008743 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.6e-73
Identity = 153/163 (93.87%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 2   ASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVVM 61
           ASTF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVVM
Sbjct: 4   ASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 63

Query: 62  AGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVGV 121
           AGVLGIYGLIIAVIISTGINPKAKPYYLFDG+AHLS GL+CGLA LA+GM IGIVGD GV
Sbjct: 64  AGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGV 123

Query: 122 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 124 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 166

[Close]

BLAST of Sed0005913 vs. ExPASy TrEMBL
Match: A0A2Z7AAX7 (V-type proton ATPase proteolipid subunit OS=Dorcoceras hygrometricum OX=472368 GN=F511_08666 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.6e-73
Identity = 154/164 (93.90%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           MASTF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAK YYLFDG+AHLS GLSCGLA LA+GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLSCGLAGLAAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 281.2 bits (718), Expect = 5.4e-76
Identity = 152/164 (92.68%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVV 60
           MASTF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVG 120
           MAGVLGIYGLIIAVIISTGINPKAK YYLFDG+AHLS GL+CGLA L++GM IGIVGD G
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 164

[Close]

BLAST of Sed0005913 vs. TAIR 10
Match: AT2G16510.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 277.7 bits (709), Expect = 6.0e-75
Identity = 150/162 (92.59%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 3   STFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVVMA 62
           STF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 63  GVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVGVR 122
           GVLGIYGLIIAVIISTGINPKAK YYLFDG+AHLS GL+CGLA L++GM IGIVGD GVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 163

[Close]

BLAST of Sed0005913 vs. TAIR 10
Match: AT4G38920.1 (vacuolar-type H(+)-ATPase C3 )

HSP 1 Score: 277.7 bits (709), Expect = 6.0e-75
Identity = 150/162 (92.59%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 3   STFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVVMA 62
           STF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 63  GVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVGVR 122
           GVLGIYGLIIAVIISTGINPKAK YYLFDG+AHLS GL+CGLA L++GM IGIVGD GVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 163

[Close]

BLAST of Sed0005913 vs. TAIR 10
Match: AT4G34720.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 277.7 bits (709), Expect = 6.0e-75
Identity = 150/162 (92.59%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 3   STFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVVMA 62
           STF+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 63  GVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVGVR 122
           GVLGIYGLIIAVIISTGINPKAK YYLFDG+AHLS GL+CGLA L++GM IGIVGD GVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 163

[Close]

BLAST of Sed0005913 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 275.4 bits (703), Expect = 3.0e-74
Identity = 149/163 (91.41%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 2   ASTFNGDETAPFFGFLGAAAALVFACMGAAYGTAKSGVGVASMGVMKPELVMKSIVPVVM 61
           +S F+GDETAPFFGFLGAAAALVF+CMGAAYGTAKSGVGVASMGVM+PELVMKSIVPVVM
Sbjct: 3   SSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 62

Query: 62  AGVLGIYGLIIAVIISTGINPKAKPYYLFDGFAHLSGGLSCGLASLASGMTIGIVGDVGV 121
           AGVLGIYGLIIAVIISTGINPKAK YYLFDG+AHLS GL+CGLA L++GM IGIVGD GV
Sbjct: 63  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 122

Query: 122 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165
           RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA
Sbjct: 123 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA 165

The following BLAST results are available for this feature:

BLAST of Sed0005913 vs. NCBI nr


Match Name	E-value	Identity	Description
ADQ53511.1	8.9e-73	92.68	VAH protein [Phyllostachys edulis]	[more]
XP_020180409.1	8.9e-73	93.29	V-type proton ATPase 16 kDa proteolipid subunit [Aegilops tauschii subsp. strang...	[more]
KAF0932236.1	1.2e-72	93.87	hypothetical protein E2562_008743 [Oryza meyeriana var. granulata]	[more]
KAG8059027.1	1.2e-72	93.87	hypothetical protein GUJ93_ZPchr0002g23873 [Zizania palustris]	[more]
KZV18860.1	1.2e-72	93.90	V-type proton ATPase 16 kDa proteolipid subunit [Dorcoceras hygrometricum]	[more]

BLAST of Sed0005913 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59228	7.6e-75	92.68	V-type proton ATPase subunit c2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c2 PE=2 S...	[more]
P23957	9.9e-75	92.07	V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa OX=4498 GN=VATP-...	[more]
A2ZBW5	9.9e-75	91.46	V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica OX...	[more]
Q0IUB5	9.9e-75	91.46	V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica ...	[more]
Q43434	1.7e-74	92.07	V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum OX=3635 GN...	[more]

BLAST of Sed0005913 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1D5T1X1	4.3e-73	93.29	V-type proton ATPase proteolipid subunit OS=Triticum aestivum OX=4565 PE=3 SV=1	[more]
E5G3F9	4.3e-73	92.68	V-type proton ATPase proteolipid subunit OS=Phyllostachys edulis OX=38705 PE=2 S...	[more]
A0A452XKH4	4.3e-73	93.29	V-type proton ATPase proteolipid subunit OS=Aegilops tauschii subsp. strangulata...	[more]
A0A6G1F5P2	5.6e-73	93.87	V-type proton ATPase proteolipid subunit OS=Oryza meyeriana var. granulata OX=11...	[more]
A0A2Z7AAX7	5.6e-73	93.90	V-type proton ATPase proteolipid subunit OS=Dorcoceras hygrometricum OX=472368 G...	[more]

BLAST of Sed0005913 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19910.1	5.4e-76	92.68	ATPase, F0/V0 complex, subunit C protein	[more]
AT2G16510.1	6.0e-75	92.59	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G38920.1	6.0e-75	92.59	vacuolar-type H(+)-ATPase C3	[more]
AT4G34720.1	6.0e-75	92.59	ATPase, F0/V0 complex, subunit C protein	[more]
AT1G75630.1	3.0e-74	91.41	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 134..157 score: 82.68 coord: 30..54 score: 80.11 coord: 56..80 score: 71.05 coord: 107..133 score: 77.1
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 98..155 e-value: 5.4E-20 score: 71.5 coord: 17..76 e-value: 3.9E-13 score: 49.5
None	No IPR available	GENE3D	1.20.120.610		coord: 11..162 e-value: 1.1E-61 score: 208.9
None	No IPR available	PANTHER	PTHR10263:SF47	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 3..164
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 3..164
None	No IPR available	CDD	cd18175	ATP-synt_Vo_c_ATP6C_rpt1	coord: 13..80 e-value: 7.3065E-31 score: 104.539
None	No IPR available	CDD	cd18176	ATP-synt_Vo_c_ATP6C_rpt2	coord: 89..156 e-value: 2.41832E-30 score: 103.354
IPR011555	V-ATPase proteolipid subunit C, eukaryotic	TIGRFAM	TIGR01100	TIGR01100	coord: 13..121 e-value: 2.1E-49 score: 164.2
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 13..77
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 87..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005913.1	Sed0005913.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function	GO:0015078	proton transmembrane transporter activity