Sed0005766 (gene) Chayote v1

Overview


Name	Sed0005766
Type	gene
Organism	Sechium edule (Chayote v1)
Description	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4
Location	LG04: 30117596 .. 30127936 (-)
RNA-Seq Expression	Sed0005766
Synteny	Sed0005766

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCATTTCTAATCGAACATTGCGGAAGGCTGAAGGTTGGAACCCTATTCTCTTTGCCGTGAAGATTTTGTTTCAGAATTTCAAGGTATAATTGCTTCTACTTCGAAGATTTTGTGAACCCTAACTTTCTCGCTCTTTTGAATCTCACTGGAATTTTCTTTCAATCAATTCGTGCGTGTTCAGAGAGTATTTCCAAGTTCCGACATGTTTCCTTATTTTCGATTAGAATGATATTTCTCATTTCCGAGTTCCAATTGCTTTTCTTGCAAGCAAGATATTTCGTTTGGTTGATTGTTGTTTGTTGATTAATTAGCTTGTAATCTTGAAATTAATTCTGTTCCAGTTTCCCTTGTGATATTTAGGATTTCCACCATATCGTCCCTACATTTGTGACAATAATCGAGGTAGAAAACAGAGAATGATGTAGAAATTGAACCTCATTTCTTTATCAAAAAGTTTGGAACTATTGATTAGACCCTGTTAGCTTCCCCATTTATTTTTTGTTTAATAAATTTCAGTTTTATTGTTTACTCGAACCTGCTTTGAGGTTTTAACTTGTGTTGGCATTGTTTATTAATTATTAATATTGTTTAAATCACATCTCTTCAAGAACTTCATAGAGAACATGAGGTTCAATAGAATCTCAGTCTTTTTTTTTTGTCCTCCAATAAAGGCTATGAATGATTTTTGTGCCTTTAGTGGGCCAAGTGTTTCCGGCAATTGCGAATGGTTTCTTTTATCTCTTCAGGTTAAAAAAAAAGACAACATTTTTTTTGATGTACTAGTCCTGTCTATTTTTTATTTTGATTACGAGAACATGTTTCTGTTAAGCAACCACTTTACAAGTGTAGATTACGAGGACATTTGTCTTTTTAACTATATGTGGTGATTTATTTGCATTGAAGTTTGGTATGAGAAGACTGACGTACGTCTATATCCATGATATGTTCCATGACAATAGTCGAGGTGCGTGCAAGCTAATTCGGATAGCTACAAATATCAAAATTAAAAAAAAAACAAAATCTATATCCATCATTTTGATGATAAGTGATTCTTGTGAAGATAAAAACACCAGATTCCCTCTAGCATCTAGAACCTTGAGAAGAAATGTCTTTCTGGGGAGGGTTGAAGCATGAAATGGAAGCCATCCATTTATATTTTTATACCATTCAGAAAAGCTTCTGGTATTCCCATTATAAGCTCCATGCATAATTTGCAGCCTTCAAATTTTTTATGGTAGTCAAAAACTGATTCTGTTTGATTCTGAACTTACAGCAAACAATGAAAGCTTGGATACCTGATATTTTCACAAATCGGATTAACTTGCAATTATTGACTTTTGATAGTTTTTCTTCTTTTAATTTATGATCGTCTGAGAAGATGGAAATGGGAATCTAACATCACAATCACTGATTTTTCAAATAGTTTGGAAACTTTTACGTGGTTAGAGCTTAGAACTTCAATGTGCCTTATTTCTTCATTATTTAAACTTGATGATTAGAATCTGAATTACTATCAACTTCCATGATATGCCTTTAATTTTATTGAATGTTCAACGGTTTCATTTTCGATCTATATGGTAAGGAATGATCTGCTATGAACAACAAGATAAACCTTATCACATTTTCTTTTTGCACAAATGCTTTTAGATCTTGGAAATCCGAGCACAAGATACACGAAAGTATATAATGATACACCTTGTATGTTTTTCATTACAGGGTCTATGATTTCTTTAGTATTCCATGGAATTAGAGTTTACTTCTGAAGGTTAATAATGAAATGCAATGCTTGCTGGAGAGAACTTGAAGGGAGAGCAATCTCCACAACTTGTGGTCACTTGTTGTGTATCCTAAGCATGCGATGTTTTTTCATTTTATAAAATTTAATTTGGTGAAACATTTGACCCATTATTAATAAATGTAAGTGGCTTAGTTGCATACATTCTTCCTTAATGGTGTAAAGGCACAGAAGATGCAAGCAAGATCCTTGGCAGTGATGGAGCCTGCCCCATTTGTGATCAAGTTCTTTCTAAAAGGTGATGAGTTTGTTATTATGAGCTTTCGAATCTCAGCATTGCTAAACTTTTATACTATTTAAACAAGGTTTGCACCAGTTCCCCATGCACGGTAGAAGAAAAATTGCAGTGTAGTTTTACTAATAGCATGTAGGAAATGTCTTAAGGACCCATCAGCTAATCAATCATTCATATCAACTTCTTAGCAAATTTTATTACCACCATTTAGACAATTATTGTTTCCATGGGTTTACAGTTATACATTGATGATATGATTTTATTCACTTACCTCCAATTTCTATTTGGCAGCCTCATGAAACCCGTGGATATCAATCCAAACGATGAATGGGTAAATGTAAGTATTTTTTTCAAAGGATTGCATTTACCTTGCTCAAGTCTTCTAGGACTTTTCTAGCGTTTCTCAACCTTTTCCTTGTATGTGACTTTTCTGCTTCGTTAAGTTGTCTCACTGCTTTTGTGATACGATCCCGCGTTCGTTGAAAGTTTACTCAAGGCGAGCCAAGAAGTGACGAATCCTTTTTATGGTTTTATTAATTGTAATTCTGTTTTGCTATTTAAGTTGTATTGGGCTTTTGGGCCTTAATAGGGTTAGTTACTTATTAGGTTAAATCTTAGGTTTACTATAAAGAGGAGATGTTAGGCCTCTAGAAAGGCATTCAAACAGTTGTTGTCTTTGTATTTGGCTCTCTGAGAGATCCTCTCGAGAGATTATCGTAGTTTCTTAATAATAATAGTAGTAGATTCTATCATTTTGGTATCAGAGCCATTTACCGATCCGGGAATGGTGACCACTAAGATGGAAACTAGGATGCAAGAATGCGAGGAAGGGTCCGAGGAATTGGCGAGGAGGTTGAAGGATGTAGAAGCAAGGTCGGAATCGCTTGAAGAACGTTTGGGGAAAAAGATGGATTTGAAATTCGAACAACAGGATGTGAAGTTCGAGATGATCAACCGGAGTCTGCAGCTGTTAATGGAAGCAAGGCAAGGAGACAAGGGAAGGGGTGGCGATTGAGGCCGCGGGCGAGGAGAGGGGCGGCGGCAGGCGGCTGGCGCGCGGCCAAGCGCAACAAGGAGCAGGGGTCGGGCGCGGAAGGAGGGTCGTCCGAGAGGAGGTGGGCGTGATTGGGGGCTACTGGCGGGGCCGGGCGGTGGGGCGTCGGGCTCGCGAGGGTAGCGTCGGTCAGCGATCGCGCGCGCGACGCGAGCGGCAGTGGCGGCGGCGCGGGTCTGTCCGCGAGGGGTGACCGACGGGGTTGGTGCGGGCGGCGCAGGCAGAGGAGCTTGTGCGGGAAGTGGAGCGCGCGGGCGAGGCGGGGACGAAGTCTTTGGGGCCCAAGCGTGGGAAGCGGCGGGCCGGGTGAGTGGGGGCGTCGTGAGGCCTGGGGAGCGTGCGACGAGCCCCGGGGCGGCGCGAGCGGGCGAGGCATCTGGGGCGGGCCTGGTGCAGCGAGCGGGGTCGGGCCTGGTACGGTGGGCGTGGGCGAGCGCGAGCTTGTGGTGGGGCTTGAGTTAGGGGCGGTGAAGGCCGGGGGTGGGGCGCGGCAAGGCTGGGCCGAAGTCGGCTGGACCGAGCCGGTTCGGGTCGACCGGGTTGGACCGGGGAGAAATTTGTCAGACATGGGCCGACGGGGTAGTCGGATGGGCTCGAATTCGATCGGCGGGGTATTCTCGATTCGGTGGAAGGGAAGACGGGGTTGCGGAGGAGGAAGAGAGAGCGCGATCGGTTATGAACGGCCGATAGCGCATGACGGTTGGAACGATCGGGGTTGGGATGGTTGTAACCTAGATGGAGAGCGGACGGATTGGAGAGATAGACAGGTCATTTGAGTATGAAGGACCGGATCAGCGGTCGAGATGGACCCTTGGTAGATAGGAGGTTACGAAAGTTGGAAATGCTGTATTTAAAGGGCTAGCGGATGAGGACCACTGAAGGATGGTTATGCCGCGTCGAAAAGGTACGGGTGAATCGGCTGATGGGGCACGAAAGAGTTGACGCCGCAGCCTTGTGTATGGAAGGAGAGGCACTAGAGTGGTTACAGTATGAGGAGGACCGTGCTCAAATTGCTTCGTGGGAAGAGTTCCGAGAATTGTTGTTACATCGTTTCCAAGCGACGATTAATGACAATAAATATGCTAATTTGATGAGTCTGCAGCAAGTTGGGACCGTAAGGGAGTATCGCCGGTTGTTTGAAAAATATGCCAAAGGTATACGCGACATCAGTACGAGTGCCTTGGAAGGGAAATGGGAGAGTGGTCTGAAGGCGGAAATTCGGAGTGAGATGAGGAAGCTTAGGCCCGTAGGAATTCAGGACAAGAAGTTTATGGCACAGGTAATTGAGGATGACCTGGCTTTTCGAAATCAAGCGAAAGGAGGGGGCATCTCAGCAGTGGTTAAATCCGGGATGGGATCCGGGACGGTTAGTGCGAAGGTGGCGGGAGGATCAAACCTAAGAACTCTCGCTTTCACTCCCAACCGATCAACACCATCGAATACCCTCACCCCTGCAGTTCCCTATAAACGACTTACGGATAATGAGATCCGTATACGAAAGGATAAGGGACTGTGCTTTAGATGCGATGAGAAGTTCGTTCCGGGACACCGTTGTAAAAAGAAAGAGCTGCAGGCACTTGAGATACTTGTAGTACGCGATAGGGTGGATTGTCTGGGAGATGACGAAACCGATGAGTCCCAGGATTATGGGGCCGAGGAGGAGAGTGTTGAGGACACTGGGGAGACACCGAATATAGCAGCGCTATCCTTGAATTCAATGGCAGGACTGAGCTCCCCAAAAACGCTTAAAGTAACAGGATCAATACAGGGGCACGAAGTAGTTGTATTGATTGATAGTGGGGCTACACATAACTTTGTATCCGATGACATTGTGGCTAAATTGAAATTACATGTGGAGCCGTCCGATGATTATGGCATTATGTTGGGGACTGGGGATTCTGTGAGAACGGCGGGCATATGTAAGAATGTGGAACTTCAGTTGGCCAAAGTGCGAATAGTGAACGATTTTTTGCCTTTACCACTGGGCAGTGCAGATGTGATTTTGGGCGTCGTGTGGCTAGCGACGTTGGGAAAAATCGAATTTGACTACCGTGCACTAAAAATGCAATTCACACTGGGACTTGGAAAGGTCGAGTTACAGGGCGAGCCACGGCTGGTCAAGGCCCAAGTCTCATTAAAGTCCATGATGAAATCCTTACGGCCAGAGGATCAAGGACTCTTGGTCGAGTTAAACATGCTCGAGGCACCGATACCAGCGCGAGAACAAACCGGAGCTCTACCAGATCTGTCTCAGGTACCCACAGAACTACACTCTGTACTTCATTTTTTTTCACCGGTTTTTGAATCATTGACAGACCTACCCCCGCAACGGAATTGTGATCATGCTATTGAACTAATGACCGGCAAGGATTCTGTAAATGTACGTCCGTACCGGTACCCACAGTATCAAAAGAATGAGATTGAACGATTAGTGGGGGAAATGTTGTTGGCAGGAATTATCCGTCCTAGCACGAGCCCGTTTTCCAGCCCAGTTTTGTTGGTAAAAAAGAAGGACGGGAGTTGGCGTTTTTGTGTTGACTACCGAGCCCTGAATCAGGCAACAGTACCCGATAAATATCCGATACCACTAGTTGACGAGTTGTTGGATGAGCTGCATGGAGCGACAGTGTTTTCGAAAATTGACCTTAAGGCGGGTTATCATCAGATCCGTGTTAAGCCAGCTGATGTACATAAGACGGCTTTTAGAACTCACGAGGGCCACTATGAATTTGTAGTCATGCCCTTTGGATTAAGAAATGCTCCTGCTACGTTCCAGTCGGTTATGAATGAGATTTTGCGTCCGTTTCTCGCCCGATTTGTGCTCGTATTTTTGATGATATTTTGATCTCTGATCTGTCCATCCAAGATCATAAAGAGCACTTAGTTCAAGTTTTTAAAGCGTTACAGGCCCATGCATTTGTAGCAAATTCCAAGAAATGTCAGTTTGGACTAAGCCGGATTGAGTATTTGGGGCATTTTATATCTGCCGAAGGAGTGGCTGCCGATCCAGAGAAAATTGCAGCCATGTTACGTTGGCCTAGTCCCAAAAACATTAAGGACCTACGGGGTTTTCTTGGGTTGACGGGTTACTATCGTCGTTTCGTGGCTAATTATGGATCGATGGCTTTTCCACTGACCCAGTTGTTGAAAAAAGGGAAGTTTGAATGGAGTCCGTTGGCAGAGGATTGTTTTCAGAGACTTAAGCATGCCATGAGTAGTGTGCCCGTCTTACGATTGCCAGATTTTGATCAGTTGTTTGTTGTGGAAACTGATGCTTCCGGTATCGGGGTGGGCGCCGTTTTGATGCAGCAGGGGCAGCCATTGGCTTATTTTAGTAAAGCCTTGCCTATAACCCACCGCGTGAAGTCTGTATATGAGCGCGAGCTGATGGCCATCGTATTTGCCGTACAACGTTGGCGAGCGTATTTACTGGGACATCATTTTGTCGTCCGTACGGACCAAAAAAGCCTCAAGTTTCTGTTAGAACAACGGGTGGTTGATGGGGAGTATCAGCGGTGGATTGCGAAGCTCCTAAGTTATGATTTCCACATTGAGTATAAAAAGGGCCTAGAAAACAGAGCGGCAGATGCTCTCTCTCGAATGCCGGCGGCAGGAGAATTGAGCATGTTGAGTTGTGTGGCCGGGGTTAATACAATCGTTTTCACTCAGCAGGTACGGGAAGACGTGAAGTTGTTGGCTATTTATACCGCCTTGGTTGCCGGTGAGGCGAGTCCACCGGGTTATTCCGTCAGGGGTGATGTGTTATTGTACCAGGGTCGACTGGTGCTACCTCCGACGTCTCCTACGATTCCTCTGTTATTGACTGAGTTCCACGGAGGAGCCATCGGGGGACATTTTGGGGTCCTCAAGACGTATCAACGTTTGGCTAAAGAGGTGTATTGGACGGGCATGAAGGCTCGCACGTGCGTTGTGGCCGAGTGCTCAGTTTGCGTGCAAGCAAAACATTTGTCGTTGTCCCCAGCGGGCTTATTACAACCACTACCGATTCCAGAACGAGTTTGGGAAGACATTTCTATGGATTTCGTGGAGGGACTTCCTCGTTCAGAGGGTTATGACACTATTTTTGTGGTGGTCGATCGGCTTTCGAAGTATGCTCATTTTATACCCCTTCGACATCCATTCACTTCTCTCACAGTGTCCCAGGTCTTTATCCGCGAGGTGGTCCGGTTGCACGGGGTACCTAAGAGTATCGTATCGGACCGTGACAAGATATTCACTAGCCTGCTATGGGAGGAAATGTTCAAGGCTTCTGGAACGCAGTTGCGGCGCAGTACCACTTATCATCCACAGACGGATGGTCAAACTGAGGTCGTGAACCGCTGTTTGGAATCTTATTTAAGATGCTTTGTGTTGACACAGCCGACGAAGTGGTATCAGTGGCTTGCATGGGCTGAGTTCAGCTTTAATACGTCGTACCATTCTTCTACAGGTATGACACCCTTTGAGATTGTTTATGGGCGTTCTCCACCGTCAATTTTGGGGTACGATTATGGGGCTAGCCGGTTGCCACCGTGGATTCGTTAATGGTGGAACGTGATAGGATGTTGGATAAGCTTAAGGCTACCTTGTTGCGATCTCAACAGTTGATGACGGATCGTGCTAATGCCAAACGTCGGGATGTTCAGTTTGCTTTGGACGATTGGGTGTATGTTAAGCTCCGTCCTTACCGTCAGTCTTCCTTGGCGAAATTTAAGCACCCTAAGTTAGCACCACGATTTATTGGACCGTATCGAGTGTTAGCTCGGGGGGGGGGCGATTGCATACCGATTGGAGTTACCACCGACTGTGAAGATTCACCCGGTTTTCCATGTATCCGTGCTGCGTAAGGCGGTTGGTTCTCCTCGCCTAGTTTTCCCTACACCGGCCTTGGTGGGCGACGACTTAGGCGTGCTGGTTTGTCCCAAGGCTGTTTTGGGCATGCGGGAGTCTCCACAGGATGGAGGGTCGCGCCAGATTTTAGTGCAGTGGGAGGGGTCAACTCCTGATGATGCTACCTGGGAGTCCGCTGCTGATATCGAGCTACAGTTTCCGGACTTTCACCTTGAGGACAAGGTGGCTTTTTGGGGGGGAAGTATTGATACGATCCCGCGTTCGTTGAAAGTTTACTCAAGGCGAGCCAAGAAGTGACGAATCCTTTTTATGGTTTTATTAATTGTAATTCTGTTTTGCTATTTAAGTTGTATTGGGCTTTTGGGCCTTAATAGGGTTAGTTACTTATTAGGTTAAATCTTAGGTTTACTATAAAGAGGAGATGTTAGGCCTCTAGAAAGGCATTCAAACAGTTGTTGTCTTTGTATTTGGCTCTCTGAGAGATCCTCTCGAGAGATTATCGTAGTTTCTTAATAATAATAGTAGTAGATTCTATCATTTTGATACTGACATTCACCACACTAAATATTGCAGATGGCCATGGCTGGTATATCTCCTCAGATATGTATCCTTCGAAATAAACACTAATGATACAAAATTAATAATTAATGATAAACTAACCTCCAAATTTTGAAAACACATATTTTCCATACTTTTAATAGTTGGTAAGATAATTATTCTGGTGATGTGTTCTCATAGTATATTGTAACAATATGAAATATAGATTGTCATTAGTTTTCCTTGACTGGTCCCAGTGATGAAAAGTGCATACAGAAGTGTAATGTTCTATATTGGGCAAAAGGAATTGGAGATGCAGTACAAAATGAACAGAATCGTGGGTCAATGCAGACAGAAATGTGAAGTTATGCAGGAAAAGTTTACTGAGAAACTGGAGCAGGTGCACGCTGCATACCAAAAAATGGCCAAGAGATGCCAGATGATGGAGCGAGAGATGGAGAATTTATCCAAAGACAAACAAGAGCTCCAGGAGAAGTTTTCTGAAAAATCCAGGTCATCTTCTTTCAATTTTGCTTTCGACTTCTTAACCGAATCCAGAGGGCATTTTCTATTTGTAATATCCTGAACCAGAAATTTCAATTCCATGTTAGGCAGAAGAGGAAACTAGATGAGATGTATGATCAATTGAGGAATGAGCATGAATCACTAAAACGTTCGGCCATCCAGCCTGTGAGCAATTTTTTCCCAAGAAATGAGCCGGATCTGTTCTCAAATCCTGTTAATTTGATGGACAACAGAGAACCGATGCGCAAAGGTAATCCTTTTCTCTTTCGAATTTTAAAGAATGAAAACTTCAGATGAATTCAAACCATGCTTTAGCTTAATAACGTCGTGTAATGCTCAAGTATTTCCAAAACAAGTTGACTTATTTCTTGCAGACTGTCTTATTTCCGCTCCTAACACCCCAGGGCCAAGAGAGGAATTATGGCCAACAAGGCAGAATAGTGGGAACTCTGGCCATTTCGACATCTCTGTCGGGTCACCGGCAAAACAAGCTGCTCCAATGGCAATGGAGGCTGGGAGCAGAAGAGCTGGAGCTCACACCGCGTTTGGAAGTGGAGCTGGTAACCCCTCCATGACTCTACGCAACTTGATTCTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACGTAAGTTAATGTCAATTATCGTTGAACTATGTATTTTTTTTAAAAAAATCTCATTATTACAGGAGGAAGTTGAAACTAAAAGAAAACACGATAATAAAACACAGAAAAAATTACTTAGAAAAACTCTAAAATCAGAGGAAAAAATCACGAAGAGGAACTTTGACTATGTGACAAGTTGAAAAGTTTATAGAATCAGTACAAAATTCTCTCCTTATTGTCAAATATTGAAAACTCGCCCAAAACTTTATGCCACTCACATGCTTTCTCCAGTATCAAACAAGAGAATACAGGGAATTTAACTACAGCATGTACTATGTGTACTAAGCTTAAAATGTTTTTAACTACAATGTTTTGAAATTAAAGTCACGTGCTCTTTTTATAGCGTTTGATCTCGCTCTAGCTGAATCATAAAGATGCCTTGTAGGTTGTGAGATGGAAGTTAGCGAGTTGAAGTTTGGTGATCAAACTAGCAGATCAATTTCACTTGCTTTAAGGTTCTATCTTCTTTCTTTCTTTTAGTAGTCTTGAAGTCTTGAGGATTACAGAAAAAAATAGGAAATAGGATGCAGATTTCTTTTTCTTATTTTTTTTTTTGTATCTTGCACAATTTTTTTTTCCTGAGCTTTGTTTTCCTAAACGTAGAAGAAGAAAAAAAATGCTAAAGAAACTCAAATGTAGAATTCATTATCAACTAATCGGAC

mRNA sequence

CGCATTTCTAATCGAACATTGCGGAAGGCTGAAGGTTGGAACCCTATTCTCTTTGCCGTGAAGATTTTGTTTCAGAATTTCAAGGGTCTATGATTTCTTTAGTATTCCATGGAATTAGAGTTTACTTCTGAAGGTTAATAATGAAATGCAATGCTTGCTGGAGAGAACTTGAAGGGAGAGCAATCTCCACAACTTGTGGTCACTTGTTGTGCACAGAAGATGCAAGCAAGATCCTTGGCAGTGATGGAGCCTGCCCCATTTGTGATCAAGTTCTTTCTAAAAGCCTCATGAAACCCGTGGATATCAATCCAAACGATGAATGGGTAAATATGGCCATGGCTGGTATATCTCCTCAGATATTGATGAAAAGTGCATACAGAAGTGTAATGTTCTATATTGGGCAAAAGGAATTGGAGATGCAGTACAAAATGAACAGAATCGTGGGTCAATGCAGACAGAAATGTGAAGTTATGCAGGAAAAGTTTACTGAGAAACTGGAGCAGGTGCACGCTGCATACCAAAAAATGGCCAAGAGATGCCAGATGATGGAGCGAGAGATGGAGAATTTATCCAAAGACAAACAAGAGCTCCAGGAGAAGTTTTCTGAAAAATCCAGGCAGAAGAGGAAACTAGATGAGATGTATGATCAATTGAGGAATGAGCATGAATCACTAAAACGTTCGGCCATCCAGCCTGTGAGCAATTTTTTCCCAAGAAATGAGCCGGATCTGTTCTCAAATCCTGTTAATTTGATGGACAACAGAGAACCGATGCGCAAAGACTGTCTTATTTCCGCTCCTAACACCCCAGGGCCAAGAGAGGAATTATGGCCAACAAGGCAGAATAGTGGGAACTCTGGCCATTTCGACATCTCTGTCGGGTCACCGGCAAAACAAGCTGCTCCAATGGCAATGGAGGCTGGGAGCAGAAGAGCTGGAGCTCACACCGCGTTTGGAAGTGGAGCTGGTAACCCCTCCATGACTCTACGCAACTTGATTCTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACGTTGTGAGATGGAAGTTAGCGAGTTGAAGTTTGGTGATCAAACTAGCAGATCAATTTCACTTGCTTTAAGGTTCTATCTTCTTTCTTTCTTTTAGTAGTCTTGAAGTCTTGAGGATTACAGAAAAAAATAGGAAATAGGATGCAGATTTCTTTTTCTTATTTTTTTTTTTGTATCTTGCACAATTTTTTTTTCCTGAGCTTTGTTTTCCTAAACGTAGAAGAAGAAAAAAAATGCTAAAGAAACTCAAATGTAGAATTCATTATCAACTAATCGGAC

Coding sequence (CDS)

ATGAAATGCAATGCTTGCTGGAGAGAACTTGAAGGGAGAGCAATCTCCACAACTTGTGGTCACTTGTTGTGCACAGAAGATGCAAGCAAGATCCTTGGCAGTGATGGAGCCTGCCCCATTTGTGATCAAGTTCTTTCTAAAAGCCTCATGAAACCCGTGGATATCAATCCAAACGATGAATGGGTAAATATGGCCATGGCTGGTATATCTCCTCAGATATTGATGAAAAGTGCATACAGAAGTGTAATGTTCTATATTGGGCAAAAGGAATTGGAGATGCAGTACAAAATGAACAGAATCGTGGGTCAATGCAGACAGAAATGTGAAGTTATGCAGGAAAAGTTTACTGAGAAACTGGAGCAGGTGCACGCTGCATACCAAAAAATGGCCAAGAGATGCCAGATGATGGAGCGAGAGATGGAGAATTTATCCAAAGACAAACAAGAGCTCCAGGAGAAGTTTTCTGAAAAATCCAGGCAGAAGAGGAAACTAGATGAGATGTATGATCAATTGAGGAATGAGCATGAATCACTAAAACGTTCGGCCATCCAGCCTGTGAGCAATTTTTTCCCAAGAAATGAGCCGGATCTGTTCTCAAATCCTGTTAATTTGATGGACAACAGAGAACCGATGCGCAAAGACTGTCTTATTTCCGCTCCTAACACCCCAGGGCCAAGAGAGGAATTATGGCCAACAAGGCAGAATAGTGGGAACTCTGGCCATTTCGACATCTCTGTCGGGTCACCGGCAAAACAAGCTGCTCCAATGGCAATGGAGGCTGGGAGCAGAAGAGCTGGAGCTCACACCGCGTTTGGAAGTGGAGCTGGTAACCCCTCCATGACTCTACGCAACTTGATTCTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACGTTGTGA

Protein sequence

MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDEWVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL

Homology

[Close]

BLAST of Sed0005766 vs. NCBI nr
Match: XP_022942639.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucurbita moschata] >XP_022982075.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 577.0 bits (1486), Expect = 9.5e-161
Identity = 288/304 (94.74%), Postives = 297/304 (97.70%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           WVNMAMAGI+PQILMKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGINPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH AYQKMAKRCQMMEREMEN+SKDKQELQEKF+EKSRQKRKLDEMYDQLRNEHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSG 240
           SAIQPVSNF+PRNEPDLFSNPV+LMDNREPMRKD L+SAP TPGPREE+WPTRQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNSG 240

Query: 241 HFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300
           HFDISVGSPAKQAAPMAMEAG+RR GAH AFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ
Sbjct: 241 HFDISVGSPAKQAAPMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300

Query: 301 MFTL 305
           MFTL
Sbjct: 301 MFTL 304

[Close]

BLAST of Sed0005766 vs. NCBI nr
Match: XP_023550910.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575.9 bits (1483), Expect = 2.1e-160
Identity = 287/304 (94.41%), Postives = 297/304 (97.70%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           WVNMAMAGI+PQILMKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGINPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH AYQKMAKRCQM+EREMEN+SKDKQELQEKF+EKSRQKRKLDEMYDQLRNEHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMLEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSG 240
           SAIQPVSNF+PRNEPDLFSNPV+LMDNREPMRKD L+SAP TPGPREE+WPTRQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNSG 240

Query: 241 HFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300
           HFDISVGSPAKQAAPMAMEAG+RR GAH AFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ
Sbjct: 241 HFDISVGSPAKQAAPMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300

Query: 301 MFTL 305
           MFTL
Sbjct: 301 MFTL 304

[Close]

BLAST of Sed0005766 vs. NCBI nr
Match: XP_022942640.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Cucurbita moschata] >XP_022982084.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 575.5 bits (1482), Expect = 2.8e-160
Identity = 287/303 (94.72%), Postives = 296/303 (97.69%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           WVNMAMAGI+PQILMKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGINPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH AYQKMAKRCQMMEREMEN+SKDKQELQEKF+EKSRQKRKLDEMYDQLRNEHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSG 240
           SAIQPVSNF+PRNEPDLFSNPV+LMDNREPMRKD L+SAP TPGPREE+WPTRQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNSG 240

Query: 241 HFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300
           HFDISVGSPAKQAAPMAMEAG+RR GAH AFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ
Sbjct: 241 HFDISVGSPAKQAAPMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300

Query: 301 MFT 304
           MFT
Sbjct: 301 MFT 303

[Close]

BLAST of Sed0005766 vs. NCBI nr
Match: XP_023550918.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.3 bits (1479), Expect = 6.1e-160
Identity = 286/303 (94.39%), Postives = 296/303 (97.69%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           WVNMAMAGI+PQILMKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGINPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH AYQKMAKRCQM+EREMEN+SKDKQELQEKF+EKSRQKRKLDEMYDQLRNEHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMLEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSG 240
           SAIQPVSNF+PRNEPDLFSNPV+LMDNREPMRKD L+SAP TPGPREE+WPTRQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNSG 240

Query: 241 HFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300
           HFDISVGSPAKQAAPMAMEAG+RR GAH AFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ
Sbjct: 241 HFDISVGSPAKQAAPMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300

Query: 301 MFT 304
           MFT
Sbjct: 301 MFT 303

[Close]

BLAST of Sed0005766 vs. NCBI nr
Match: XP_038905984.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 571.2 bits (1471), Expect = 5.2e-159
Identity = 283/304 (93.09%), Postives = 295/304 (97.04%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRA+STTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPN+E
Sbjct: 1   MKCNACWRELEGRAVSTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNEE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           W NMAMAGISPQ LMKSAYRSVMFYIGQKELEMQYKMNR++ QCRQKCEVMQEKFTEKLE
Sbjct: 61  WANMAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVHAAYQKMAKRCQMMEREMENL+KDKQELQEKF+EKSRQKRKLDEMYDQLRNEHESLKR
Sbjct: 121 QVHAAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSG 240
           SAIQP SNF+PRNEPDLFSNPVNLMDNREPMRKD ++SAP TPGPREE+WPTRQNSGNSG
Sbjct: 181 SAIQPASNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSG 240

Query: 241 HFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300
           HFDISVGSPAKQAAPM MEAG+RRAGAHTAFGSG GNPSMTLRNLILSPIKRPQLSRRPQ
Sbjct: 241 HFDISVGSPAKQAAPMTMEAGNRRAGAHTAFGSGVGNPSMTLRNLILSPIKRPQLSRRPQ 300

Query: 301 MFTL 305
           MFTL
Sbjct: 301 MFTL 304

[Close]

BLAST of Sed0005766 vs. ExPASy Swiss-Prot
Match: F4HRI2 (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana OX=3702 GN=HEI10 PE=2 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 2.7e-126
Identity = 235/309 (76.05%), Postives = 267/309 (86.41%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           M+CNACWR+LEGRAISTTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPN+E
Sbjct: 1   MRCNACWRDLEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNEE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           W+NMAMAGISPQILMKSAYRSVMFYI Q++LEMQYKMNR+V QCRQKCE MQ KF+EK+E
Sbjct: 61  WINMAMAGISPQILMKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCEGMQAKFSEKME 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH AYQKM KRCQMME+E+ENL+KDKQELQEKFSEKSRQKRKLDEMYDQLR+E+ES+KR
Sbjct: 121 QVHTAYQKMGKRCQMMEQEVENLTKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKR 180

Query: 181 SAIQPVSNFFPRN-EPDLFSNP-VNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGN 240
           +AIQP +NF+PR+ EPD FSNP VN+M+NRE +RKD    +P TPGP++E+WP RQNS N
Sbjct: 181 TAIQPANNFYPRHQEPDFFSNPAVNMMENRETIRKDRSFFSPATPGPKDEIWPARQNSSN 240

Query: 241 SGHFDISVGSPAKQAAPMAMEAGSRRAG-AHTAF-GSGAGNPSMTLRNLILSPIKRPQLS 300
           SG FDIS  SPA     +  + G+RRAG  H  + G G  NP  TLRNLILSPIKR QLS
Sbjct: 241 SGPFDISTDSPA-----IPSDLGNRRAGRGHPVYGGGGTANPQSTLRNLILSPIKRSQLS 300

Query: 301 R-RPQMFTL 305
           R RPQ+FTL
Sbjct: 301 RSRPQLFTL 304

[Close]

BLAST of Sed0005766 vs. ExPASy Swiss-Prot
Match: I6PL68 (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=HEI10 PE=1 SV=2)

HSP 1 Score: 423.3 bits (1087), Expect = 2.3e-117
Identity = 219/306 (71.57%), Postives = 254/306 (83.01%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEG+A+STTCGHLLCTEDA KIL +D ACPICDQVLSKS M+PVD NPND+
Sbjct: 1   MKCNACWRELEGQAVSTTCGHLLCTEDAKKILSNDAACPICDQVLSKSHMRPVDTNPNDD 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           W NM+MAG+SPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCE+MQ KFTEKLE
Sbjct: 61  WTNMSMAGVSPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCELMQAKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           +VH AYQKMAK+CQ+ME+E+ENLS+DKQELQEKF+EKSRQKRKLDEMYDQLR+E+ES KR
Sbjct: 121 EVHTAYQKMAKKCQLMEQEVENLSRDKQELQEKFAEKSRQKRKLDEMYDQLRSEYESAKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELW--PTRQNSGN 240
           SAIQP +N+FPR +PDLFS   N+MD+ +P+R+  L   P TPG R+E W  P RQ    
Sbjct: 181 SAIQPANNYFPRAQPDLFSGVPNIMDSSDPLRQG-LAGLPETPGRRDEGWAPPPRQRRST 240

Query: 241 SGHFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSR- 300
           SG F++S GSPA  AAP  ++   R+  A   FG+   N S  LRN+I+SP+KRPQLSR 
Sbjct: 241 SGPFELSAGSPAHNAAP-PVDIRPRQP-ARPVFGTAMNNTSAALRNMIISPVKRPQLSRN 300

Query: 301 RPQMFT 304
           RP MFT
Sbjct: 301 RPHMFT 303

[Close]

BLAST of Sed0005766 vs. ExPASy Swiss-Prot
Match: Q9NPC3 (E3 ubiquitin-protein ligase CCNB1IP1 OS=Homo sapiens OX=9606 GN=CCNB1IP1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.9e-11
Identity = 49/177 (27.68%), Postives = 92/177 (51.98%), Query Frame = 0


Query: 3   CN--ACWRELEGRAISTTCGHLLCTEDAS-KILGSDGACPICDQVLSKSL-MKPVDINPN 62
           CN   C  +L G A  T C H+ C +  S +   S   CP C+  LS  L +   +++P+
Sbjct: 10  CNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPS 69

Query: 63  DEWVNMAMAGISPQILMKSAYRSVMFY---IGQKELEMQYKMNRIVGQCRQKCEVMQEKF 122
           +E+  M +AG+ P+I++  + R++ F+   + Q+ L  +Y  ++  G  +Q    M++ +
Sbjct: 70  EEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ----MEKIY 129

Query: 123 TEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLR 173
           T++++        M      M++ +E   K   ++ EK  E++RQ +KL  +YD LR
Sbjct: 130 TQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLR 182

[Close]

BLAST of Sed0005766 vs. ExPASy Swiss-Prot
Match: D3Z3K2 (E3 ubiquitin-protein ligase CCNB1IP1 OS=Mus musculus OX=10090 GN=Ccnb1ip1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09
Identity = 46/177 (25.99%), Postives = 91/177 (51.41%), Query Frame = 0


Query: 3   CN--ACWRELEGRAISTTCGHLLCTEDAS-KILGSDGACPICDQVLSKSL-MKPVDINPN 62
           CN   C  +L G A  T C H+ C +  S +   S   CP C+  LS  L +   +++P+
Sbjct: 10  CNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPS 69

Query: 63  DEWVNMAMAGISPQILMKSAYRSVMFY---IGQKELEMQYKMNRIVGQCRQKCEVMQEKF 122
           +E+  M +AG+ P++++  + R++ F+   + Q+ L  +Y  ++     +Q    M++ +
Sbjct: 70  EEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAENHLKQ----MEKMY 129

Query: 123 TEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLR 173
            ++++  +     M      M++ +E   K   ++ EK  E++RQ +KL  +YD LR
Sbjct: 130 MQQIQSKNIELTSMKGEVISMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLR 182

[Close]

BLAST of Sed0005766 vs. ExPASy TrEMBL
Match: A0A6J1J1K9 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481027 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.6e-161
Identity = 288/304 (94.74%), Postives = 297/304 (97.70%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           WVNMAMAGI+PQILMKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGINPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH AYQKMAKRCQMMEREMEN+SKDKQELQEKF+EKSRQKRKLDEMYDQLRNEHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSG 240
           SAIQPVSNF+PRNEPDLFSNPV+LMDNREPMRKD L+SAP TPGPREE+WPTRQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNSG 240

Query: 241 HFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300
           HFDISVGSPAKQAAPMAMEAG+RR GAH AFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ
Sbjct: 241 HFDISVGSPAKQAAPMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300

Query: 301 MFTL 305
           MFTL
Sbjct: 301 MFTL 304

[Close]

BLAST of Sed0005766 vs. ExPASy TrEMBL
Match: A0A6J1FRW8 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447617 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.6e-161
Identity = 288/304 (94.74%), Postives = 297/304 (97.70%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           WVNMAMAGI+PQILMKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGINPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH AYQKMAKRCQMMEREMEN+SKDKQELQEKF+EKSRQKRKLDEMYDQLRNEHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSG 240
           SAIQPVSNF+PRNEPDLFSNPV+LMDNREPMRKD L+SAP TPGPREE+WPTRQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNSG 240

Query: 241 HFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300
           HFDISVGSPAKQAAPMAMEAG+RR GAH AFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ
Sbjct: 241 HFDISVGSPAKQAAPMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300

Query: 301 MFTL 305
           MFTL
Sbjct: 301 MFTL 304

[Close]

BLAST of Sed0005766 vs. ExPASy TrEMBL
Match: A0A6J1J3L3 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481027 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.3e-160
Identity = 287/303 (94.72%), Postives = 296/303 (97.69%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           WVNMAMAGI+PQILMKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGINPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH AYQKMAKRCQMMEREMEN+SKDKQELQEKF+EKSRQKRKLDEMYDQLRNEHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSG 240
           SAIQPVSNF+PRNEPDLFSNPV+LMDNREPMRKD L+SAP TPGPREE+WPTRQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNSG 240

Query: 241 HFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300
           HFDISVGSPAKQAAPMAMEAG+RR GAH AFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ
Sbjct: 241 HFDISVGSPAKQAAPMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300

Query: 301 MFT 304
           MFT
Sbjct: 301 MFT 303

[Close]

BLAST of Sed0005766 vs. ExPASy TrEMBL
Match: A0A6J1FWN8 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447617 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.3e-160
Identity = 287/303 (94.72%), Postives = 296/303 (97.69%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           WVNMAMAGI+PQILMKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGINPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH AYQKMAKRCQMMEREMEN+SKDKQELQEKF+EKSRQKRKLDEMYDQLRNEHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSG 240
           SAIQPVSNF+PRNEPDLFSNPV+LMDNREPMRKD L+SAP TPGPREE+WPTRQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNSG 240

Query: 241 HFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300
           HFDISVGSPAKQAAPMAMEAG+RR GAH AFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ
Sbjct: 241 HFDISVGSPAKQAAPMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300

Query: 301 MFT 304
           MFT
Sbjct: 301 MFT 303

[Close]

BLAST of Sed0005766 vs. ExPASy TrEMBL
Match: A0A1S3BSZ6 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492939 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.1e-158
Identity = 281/304 (92.43%), Postives = 296/304 (97.37%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRA++TTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAVTTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           W NMAMAGISPQ LMKSAYRSVMFY+GQKELEMQYKMNR++ QCRQKCEVMQEKFTEKLE
Sbjct: 61  WANMAMAGISPQTLMKSAYRSVMFYVGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH+AYQKMAKRCQMMEREMENLSKDKQELQEKF+EKSRQKRKLDEMYDQLRNEHESLKR
Sbjct: 121 QVHSAYQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFFPRNEPDLFSNPVNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGNSG 240
           SAIQPV+NF+ RNEPDLFSNPVNLMDNRE MRKD ++SAP TPGPREE+WPTRQNSGNSG
Sbjct: 181 SAIQPVTNFYTRNEPDLFSNPVNLMDNREAMRKDWMVSAPETPGPREEIWPTRQNSGNSG 240

Query: 241 HFDISVGSPAKQAAPMAMEAGSRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300
           HFD+SVGSPAKQAAPMAMEAG+RRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ
Sbjct: 241 HFDLSVGSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQ 300

Query: 301 MFTL 305
           MFTL
Sbjct: 301 MFTL 304

[Close]

BLAST of Sed0005766 vs. TAIR 10
Match: AT1G53490.1 (RING/U-box superfamily protein )

HSP 1 Score: 453.0 bits (1164), Expect = 1.9e-127
Identity = 235/309 (76.05%), Postives = 267/309 (86.41%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILGSDGACPICDQVLSKSLMKPVDINPNDE 60
           M+CNACWR+LEGRAISTTCGHLLCTEDASKIL +DGACPICDQVLSKSLMKPVDINPN+E
Sbjct: 1   MRCNACWRDLEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNEE 60

Query: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCEVMQEKFTEKLE 120
           W+NMAMAGISPQILMKSAYRSVMFYI Q++LEMQYKMNR+V QCRQKCE MQ KF+EK+E
Sbjct: 61  WINMAMAGISPQILMKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCEGMQAKFSEKME 120

Query: 121 QVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEHESLKR 180
           QVH AYQKM KRCQMME+E+ENL+KDKQELQEKFSEKSRQKRKLDEMYDQLR+E+ES+KR
Sbjct: 121 QVHTAYQKMGKRCQMMEQEVENLTKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKR 180

Query: 181 SAIQPVSNFFPRN-EPDLFSNP-VNLMDNREPMRKDCLISAPNTPGPREELWPTRQNSGN 240
           +AIQP +NF+PR+ EPD FSNP VN+M+NRE +RKD    +P TPGP++E+WP RQNS N
Sbjct: 181 TAIQPANNFYPRHQEPDFFSNPAVNMMENRETIRKDRSFFSPATPGPKDEIWPARQNSSN 240

Query: 241 SGHFDISVGSPAKQAAPMAMEAGSRRAG-AHTAF-GSGAGNPSMTLRNLILSPIKRPQLS 300
           SG FDIS  SPA     +  + G+RRAG  H  + G G  NP  TLRNLILSPIKR QLS
Sbjct: 241 SGPFDISTDSPA-----IPSDLGNRRAGRGHPVYGGGGTANPQSTLRNLILSPIKRSQLS 300

Query: 301 R-RPQMFTL 305
           R RPQ+FTL
Sbjct: 301 RSRPQLFTL 304

The following BLAST results are available for this feature:

BLAST of Sed0005766 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942639.1	9.5e-161	94.74	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucurbita moschata] >XP...	[more]
XP_023550910.1	2.1e-160	94.41	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_022942640.1	2.8e-160	94.72	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Cucurbita moschata] >XP...	[more]
XP_023550918.1	6.1e-160	94.39	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Cucurbita pepo subsp. p...	[more]
XP_038905984.1	5.2e-159	93.09	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Benincasa hispida]	[more]

BLAST of Sed0005766 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HRI2	2.7e-126	76.05	E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana OX=3702 GN=...	[more]
I6PL68	2.3e-117	71.57	E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica OX=...	[more]
Q9NPC3	4.9e-11	27.68	E3 ubiquitin-protein ligase CCNB1IP1 OS=Homo sapiens OX=9606 GN=CCNB1IP1 PE=1 SV...	[more]
D3Z3K2	1.2e-09	25.99	E3 ubiquitin-protein ligase CCNB1IP1 OS=Mus musculus OX=10090 GN=Ccnb1ip1 PE=1 S...	[more]

BLAST of Sed0005766 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J1K9	4.6e-161	94.74	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1FRW8	4.6e-161	94.74	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Cucurbita moschata OX...	[more]
A0A6J1J3L3	1.3e-160	94.72	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 OS=Cucurbita maxima OX=3...	[more]
A0A6J1FWN8	1.3e-160	94.72	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 OS=Cucurbita moschata OX...	[more]
A0A1S3BSZ6	2.1e-158	92.43	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 OS=Cucumis melo OX=3656 ...	[more]

BLAST of Sed0005766 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53490.1	1.9e-127	76.05	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..181
None	No IPR available	GENE3D	1.20.5.1000	arf6 gtpase in complex with a specific effector, jip4	coord: 130..185 e-value: 5.2E-5 score: 25.0
None	No IPR available	PANTHER	PTHR47384	E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG	coord: 1..215
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 2..50
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 1..53 e-value: 4.2E-7 score: 31.3
IPR001841	Zinc finger, RING-type	PFAM	PF14634	zf-RING_5	coord: 2..43 e-value: 1.5E-8 score: 34.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005766.1	Sed0005766.1	mRNA
Sed0005766.2	Sed0005766.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051026	chiasma assembly
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005634	nucleus