Sed0005758 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCATGAGGCCTATAAAAGGCTAAGCTTTTCACCACCATTTGCACTTGCAAGACAAGGTGAAAAATATTCCAAAGAAGCTACTCGACTGCCGGAGAGGATGAGCGGAATAATGGGCTATGTTGACGCTGCTCGGTGTGCCGTGCTCGGGTCCGAGAAGCAGCAAGTGAGCAAGCCATTCGACCATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTACGAAGGCATGCCGGAGTGGAAATTGGACTGCCTTCTCAAAGAATACGGCCTCCCAGTCGTTGGAGACATCGCTCAAAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGTCCTGTGAAATGTATTGATCATTGTGAAAAGCTTTAGACTCTAAGCCACCATCAAGTTTTTACTTACTGTTTGTGTGCTTGTGTGTGTTAGTTGGGTTCATATAGGTTAATAAAATCTTTTTTTAAGTTTGTGTTCTAA CCCCATGAGGCCTATAAAAGGCTAAGCTTTTCACCACCATTTGCACTTGCAAGACAAGGTGAAAAATATTCCAAAGAAGCTACTCGACTGCCGGAGAGGATGAGCGGAATAATGGGCTATGTTGACGCTGCTCGGTGTGCCGTGCTCGGGTCCGAGAAGCAGCAAGTGAGCAAGCCATTCGACCATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTACGAAGGCATGCCGGAGTGGAAATTGGACTGCCTTCTCAAAGAATACGGCCTCCCAGTCGTTGGAGACATCGCTCAAAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGTCCTGTGAAATGTATTGATCATTGTGAAAAGCTTTAGACTCTAAGCCACCATCAAGTTTTTACTTACTGTTTGTGTGCTTGTGTGTGTTAGTTGGGTTCATATAGGTTAATAAAATCTTTTTTTAAGTTTGTGTTCTAA ATGAGCGGAATAATGGGCTATGTTGACGCTGCTCGGTGTGCCGTGCTCGGGTCCGAGAAGCAGCAAGTGAGCAAGCCATTCGACCATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTACGAAGGCATGCCGGAGTGGAAATTGGACTGCCTTCTCAAAGAATACGGCCTCCCAGTCGTTGGAGACATCGCTCAAAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGTCCTGTGAAATGTATTGA MSGIMGYVDAARCAVLGSEKQQVSKPFDHQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVVGDIAQKRKFAMGAFLWSCEMY Homology
BLAST of Sed0005758 vs. NCBI nr
Match: XP_022958391.1 (uncharacterized protein LOC111459627 [Cucurbita moschata]) HSP 1 Score: 147.1 bits (370), Expect = 6.8e-32 Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Sed0005758 vs. NCBI nr
Match: KAA0042696.1 (hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK06100.1 hypothetical protein E5676_scaffold376G002010 [Cucumis melo var. makuwa]) HSP 1 Score: 145.2 bits (365), Expect = 2.6e-31 Identity = 65/82 (79.27%), Postives = 70/82 (85.37%), Query Frame = 0
BLAST of Sed0005758 vs. NCBI nr
Match: KAG6606051.1 (hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.1 bits (362), Expect = 5.8e-31 Identity = 69/92 (75.00%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of Sed0005758 vs. NCBI nr
Match: KAG7035999.1 (hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 143.3 bits (360), Expect = 9.9e-31 Identity = 69/94 (73.40%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Sed0005758 vs. NCBI nr
Match: KAE8647840.1 (hypothetical protein Csa_000107 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 9.9e-31 Identity = 64/81 (79.01%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of Sed0005758 vs. ExPASy TrEMBL
Match: A0A0A0KMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.6e-34 Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 0
BLAST of Sed0005758 vs. ExPASy TrEMBL
Match: A0A6J1H1Y5 (uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC111459627 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 3.3e-32 Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Sed0005758 vs. ExPASy TrEMBL
Match: A0A5D3C447 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002010 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31 Identity = 65/82 (79.27%), Postives = 70/82 (85.37%), Query Frame = 0
BLAST of Sed0005758 vs. ExPASy TrEMBL
Match: A0A6J1CXF4 (uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015321 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.2e-27 Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of Sed0005758 vs. ExPASy TrEMBL
Match: A0A067K0L0 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_20490 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21 Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of Sed0005758 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 95.5 bits (236), Expect = 2.2e-20 Identity = 40/54 (74.07%), Postives = 48/54 (88.89%), Query Frame = 0
BLAST of Sed0005758 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 84.0 bits (206), Expect = 6.6e-17 Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Sed0005758 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 9.9e-13 Identity = 35/84 (41.67%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Sed0005758 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 3.8e-12 Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Sed0005758 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 9.3e-11 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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