Sed0005758 (gene) Chayote v1

Overview
NameSed0005758
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG01: 67456669 .. 67457149 (+)
RNA-Seq ExpressionSed0005758
SyntenySed0005758
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCATGAGGCCTATAAAAGGCTAAGCTTTTCACCACCATTTGCACTTGCAAGACAAGGTGAAAAATATTCCAAAGAAGCTACTCGACTGCCGGAGAGGATGAGCGGAATAATGGGCTATGTTGACGCTGCTCGGTGTGCCGTGCTCGGGTCCGAGAAGCAGCAAGTGAGCAAGCCATTCGACCATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTACGAAGGCATGCCGGAGTGGAAATTGGACTGCCTTCTCAAAGAATACGGCCTCCCAGTCGTTGGAGACATCGCTCAAAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGTCCTGTGAAATGTATTGATCATTGTGAAAAGCTTTAGACTCTAAGCCACCATCAAGTTTTTACTTACTGTTTGTGTGCTTGTGTGTGTTAGTTGGGTTCATATAGGTTAATAAAATCTTTTTTTAAGTTTGTGTTCTAA

mRNA sequence

CCCCATGAGGCCTATAAAAGGCTAAGCTTTTCACCACCATTTGCACTTGCAAGACAAGGTGAAAAATATTCCAAAGAAGCTACTCGACTGCCGGAGAGGATGAGCGGAATAATGGGCTATGTTGACGCTGCTCGGTGTGCCGTGCTCGGGTCCGAGAAGCAGCAAGTGAGCAAGCCATTCGACCATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTACGAAGGCATGCCGGAGTGGAAATTGGACTGCCTTCTCAAAGAATACGGCCTCCCAGTCGTTGGAGACATCGCTCAAAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGTCCTGTGAAATGTATTGATCATTGTGAAAAGCTTTAGACTCTAAGCCACCATCAAGTTTTTACTTACTGTTTGTGTGCTTGTGTGTGTTAGTTGGGTTCATATAGGTTAATAAAATCTTTTTTTAAGTTTGTGTTCTAA

Coding sequence (CDS)

ATGAGCGGAATAATGGGCTATGTTGACGCTGCTCGGTGTGCCGTGCTCGGGTCCGAGAAGCAGCAAGTGAGCAAGCCATTCGACCATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTACGAAGGCATGCCGGAGTGGAAATTGGACTGCCTTCTCAAAGAATACGGCCTCCCAGTCGTTGGAGACATCGCTCAAAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGTCCTGTGAAATGTATTGA

Protein sequence

MSGIMGYVDAARCAVLGSEKQQVSKPFDHQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVVGDIAQKRKFAMGAFLWSCEMY
Homology
BLAST of Sed0005758 vs. NCBI nr
Match: XP_022958391.1 (uncharacterized protein LOC111459627 [Cucurbita moschata])

HSP 1 Score: 147.1 bits (370), Expect = 6.8e-32
Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 0

Query: 1  MSGIMGYVDAARCAVLGSEKQQ-------VSKPFDHQFQMPLHYPRYKRSDYEGMPEWKL 60
          MS IM +VDAARCAV+G+E+ Q       +SK FDH FQMPLHYP+YKRSDYEGM EWKL
Sbjct: 1  MSRIMSWVDAARCAVIGAEQPQQQQQQRVISKQFDH-FQMPLHYPKYKRSDYEGMAEWKL 60

Query: 61 DCLLKEYGLPVVGDIAQKRKFAMGAFLWSCEMY 87
          DCLLKEYGLPV GD+AQKRKFAMGAFLW  EMY
Sbjct: 61 DCLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 92

BLAST of Sed0005758 vs. NCBI nr
Match: KAA0042696.1 (hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK06100.1 hypothetical protein E5676_scaffold376G002010 [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 2.6e-31
Identity = 65/82 (79.27%), Postives = 70/82 (85.37%), Query Frame = 0

Query: 5  MGYVDAARCAVLGSEKQQVSKPFDHQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPV 64
          M   DAARC+++GSE QQ S     QFQMPLHYPRYKRSDYE MPEWKLDCLLKEYGLP+
Sbjct: 1  MSCADAARCSMIGSEHQQRSSKALDQFQMPLHYPRYKRSDYEDMPEWKLDCLLKEYGLPI 60

Query: 65 VGDIAQKRKFAMGAFLWSCEMY 87
          VGD+AQKRKFAMGAFLW CEMY
Sbjct: 61 VGDVAQKRKFAMGAFLWPCEMY 82

BLAST of Sed0005758 vs. NCBI nr
Match: KAG6606051.1 (hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.1 bits (362), Expect = 5.8e-31
Identity = 69/92 (75.00%), Postives = 76/92 (82.61%), Query Frame = 0

Query: 1  MSGIMGYVDAARCAVLGSEKQQ------VSKPFDHQFQMPLHYPRYKRSDYEGMPEWKLD 60
          MS IM +V AARCAV+G+E+ Q      +SK FDH FQMPLHYP+YKRSDYEGM EWKLD
Sbjct: 1  MSRIMSWVYAARCAVIGAEQPQQQQQRVISKQFDH-FQMPLHYPKYKRSDYEGMAEWKLD 60

Query: 61 CLLKEYGLPVVGDIAQKRKFAMGAFLWSCEMY 87
          CLLKEYGLPV GD+AQKRKFAMGAFLW  EMY
Sbjct: 61 CLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 91

BLAST of Sed0005758 vs. NCBI nr
Match: KAG7035999.1 (hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.3 bits (360), Expect = 9.9e-31
Identity = 69/94 (73.40%), Postives = 76/94 (80.85%), Query Frame = 0

Query: 1  MSGIMGYVDAARCAVLGSEKQQ--------VSKPFDHQFQMPLHYPRYKRSDYEGMPEWK 60
          MS IM +V AARCAV+G+E+ Q        +SK FDH FQMPLHYP+YKRSDYEGM EWK
Sbjct: 1  MSRIMSWVYAARCAVIGAEQPQQQQQQQRVISKQFDH-FQMPLHYPKYKRSDYEGMAEWK 60

Query: 61 LDCLLKEYGLPVVGDIAQKRKFAMGAFLWSCEMY 87
          LDCLLKEYGLPV GD+AQKRKFAMGAFLW  EMY
Sbjct: 61 LDCLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 93

BLAST of Sed0005758 vs. NCBI nr
Match: KAE8647840.1 (hypothetical protein Csa_000107 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 9.9e-31
Identity = 64/81 (79.01%), Postives = 70/81 (86.42%), Query Frame = 0

Query: 5  MGYVDAARCAVLGSEKQQVSKPFDHQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPV 64
          M   DAARC+++GSE QQ S     QFQMPLHYPRY+RSDYEGMPEWKLDCLLKEYGLPV
Sbjct: 1  MSCADAARCSMIGSEHQQRSSKAFDQFQMPLHYPRYRRSDYEGMPEWKLDCLLKEYGLPV 60

Query: 65 VGDIAQKRKFAMGAFLWSCEM 86
          VGD+AQKRKFAMGAFLW CE+
Sbjct: 61 VGDVAQKRKFAMGAFLWPCEI 81

BLAST of Sed0005758 vs. ExPASy TrEMBL
Match: A0A0A0KMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-34
Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 0

Query: 1  MSGIMGYVDAARCAVLGSEKQQVSKPFDHQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEY 60
          MSGIM   DAARC+++GSE QQ S     QFQMPLHYPRY+RSDYEGMPEWKLDCLLKEY
Sbjct: 1  MSGIMSCADAARCSMIGSEHQQRSSKAFDQFQMPLHYPRYRRSDYEGMPEWKLDCLLKEY 60

Query: 61 GLPVVGDIAQKRKFAMGAFLWSCEMY 87
          GLPVVGD+AQKRKFAMGAFLW CEMY
Sbjct: 61 GLPVVGDVAQKRKFAMGAFLWPCEMY 86

BLAST of Sed0005758 vs. ExPASy TrEMBL
Match: A0A6J1H1Y5 (uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC111459627 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-32
Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 0

Query: 1  MSGIMGYVDAARCAVLGSEKQQ-------VSKPFDHQFQMPLHYPRYKRSDYEGMPEWKL 60
          MS IM +VDAARCAV+G+E+ Q       +SK FDH FQMPLHYP+YKRSDYEGM EWKL
Sbjct: 1  MSRIMSWVDAARCAVIGAEQPQQQQQQRVISKQFDH-FQMPLHYPKYKRSDYEGMAEWKL 60

Query: 61 DCLLKEYGLPVVGDIAQKRKFAMGAFLWSCEMY 87
          DCLLKEYGLPV GD+AQKRKFAMGAFLW  EMY
Sbjct: 61 DCLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 92

BLAST of Sed0005758 vs. ExPASy TrEMBL
Match: A0A5D3C447 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002010 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31
Identity = 65/82 (79.27%), Postives = 70/82 (85.37%), Query Frame = 0

Query: 5  MGYVDAARCAVLGSEKQQVSKPFDHQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPV 64
          M   DAARC+++GSE QQ S     QFQMPLHYPRYKRSDYE MPEWKLDCLLKEYGLP+
Sbjct: 1  MSCADAARCSMIGSEHQQRSSKALDQFQMPLHYPRYKRSDYEDMPEWKLDCLLKEYGLPI 60

Query: 65 VGDIAQKRKFAMGAFLWSCEMY 87
          VGD+AQKRKFAMGAFLW CEMY
Sbjct: 61 VGDVAQKRKFAMGAFLWPCEMY 82

BLAST of Sed0005758 vs. ExPASy TrEMBL
Match: A0A6J1CXF4 (uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015321 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.2e-27
Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 0

Query: 3  GIMGYVDAARCAVLGSEKQQVSKPFDHQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGL 62
          G+MG V+         ++Q+VSK F HQFQMPLHYPRYK+SDYE MPEWKLDCLLKEYGL
Sbjct: 10 GMMGGVE--------QQQQRVSKQF-HQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGL 69

Query: 63 PVVGDIAQKRKFAMGAFLWSCEMY 87
          P+VGD+AQKRKFAMGAFLW C+ Y
Sbjct: 70 PIVGDVAQKRKFAMGAFLWPCDQY 84

BLAST of Sed0005758 vs. ExPASy TrEMBL
Match: A0A067K0L0 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_20490 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21
Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 0

Query: 1  MSG-IMGYVDAARCAVLGSEKQQVSKPFDHQFQMPLHYPRYKRSDYEGMPEWKLDCLLKE 60
          MSG I     AA     G + Q+  K  +  F+MPLHYPR+K+SDY+ MPEWKLDCLLKE
Sbjct: 1  MSGTIFSNTAAAGFKPNGHQNQETKKTENCFFRMPLHYPRFKKSDYQNMPEWKLDCLLKE 60

Query: 61 YGLPVVGDIAQKRKFAMGAFLWSCEM 86
          YGLPV+GD+ +KRKFAMGAFLW  EM
Sbjct: 61 YGLPVMGDVDEKRKFAMGAFLWPSEM 86

BLAST of Sed0005758 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 2.2e-20
Identity = 40/54 (74.07%), Postives = 48/54 (88.89%), Query Frame = 0

Query: 31 FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVVGDIAQKRKFAMGAFLWSCE 85
          FQ+PLHYP+Y +SDYE MPEW+LD LL+EYGLPV+GD  +KRKFA+GAFLWS E
Sbjct: 45 FQIPLHYPKYTKSDYEKMPEWQLDRLLREYGLPVIGDSYEKRKFAIGAFLWSSE 98

BLAST of Sed0005758 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.0 bits (206), Expect = 6.6e-17
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 31 FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVVGDIAQKRKFAMGAFLW 82
          F+MPLHYPRY + DY+ MPEWKLD +L +YGL   GD+A KR FA+GAFLW
Sbjct: 32 FRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLSTYGDLAHKRDFAIGAFLW 82

BLAST of Sed0005758 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 9.9e-13
Identity = 35/84 (41.67%), Postives = 50/84 (59.52%), Query Frame = 0

Query: 1  MSGIMGYVD-AARCAVLGSE--KQQVSKPFDHQFQMPLHYPRYKRSDYEGMPEWKLDCLL 60
          M G   ++D A+ C    ++  K    + F   FQ+PLHYP+Y +SDYE M + +LD LL
Sbjct: 14 MFGYSNHMDQASNCQSTRNKIIKMMKKEEFPSGFQVPLHYPKYSKSDYEVMDDLRLDLLL 73

Query: 61 KEYGLPVVGDIAQKRKFAMGAFLW 82
          K+YG    G +  KR FA+ +FLW
Sbjct: 74 KQYGFSFEGSLEDKRVFAIESFLW 97

BLAST of Sed0005758 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.2 bits (165), Expect = 3.8e-12
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0

Query: 31 FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVVGD--IAQKRKFAMGAFLW 82
          F+MPLHYPRY + DYE M EW+LD LL EYGL    D  + +KR FA+  F+W
Sbjct: 36 FKMPLHYPRYTKEDYEEMEEWRLDLLLSEYGLLAFHDNTLHEKRAFAIDTFIW 88

BLAST of Sed0005758 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 9.3e-11
Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0

Query: 31  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPV-VGDIAQKRKFAMGAFLW 82
           FQMPL YP Y +  Y+ M E +LD LLK YGLP  +G+++ K++FA+GAFLW
Sbjct: 57  FQMPLQYPNYAKEQYDIMSEEELDRLLKLYGLPTDIGNLSCKKEFAVGAFLW 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022958391.16.8e-3275.27uncharacterized protein LOC111459627 [Cucurbita moschata][more]
KAA0042696.12.6e-3179.27hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK0610... [more]
KAG6606051.15.8e-3175.00hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7035999.19.9e-3173.40hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAE8647840.19.9e-3179.01hypothetical protein Csa_000107 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KMG01.6e-3481.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1[more]
A0A6J1H1Y53.3e-3275.27uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC1114596... [more]
A0A5D3C4471.3e-3179.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CXF43.2e-2771.43uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A067K0L01.5e-2161.63Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_20490 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G41761.12.2e-2074.07unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G55570.16.6e-1766.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G55620.19.9e-1341.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G09950.13.8e-1256.60unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G11405.19.3e-1155.77unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33513:SF31SUBFAMILY NOT NAMEDcoord: 9..83
NoneNo IPR availablePANTHERPTHR33513OS06G0523300 PROTEINcoord: 9..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0005758.1Sed0005758.1mRNA