Sed0005537 (gene) Chayote v1

Overview
NameSed0005537
Typegene
OrganismSechium edule (Chayote v1)
DescriptionGamma-secretase subunit PEN-2
LocationLG05: 46159567 .. 46165505 (-)
RNA-Seq ExpressionSed0005537
SyntenySed0005537
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAACTAAAAATAAAATAAGAGGAGAAGAATATTTGGGCGACAAATTCGGTTACTCGTTATCTCCCAGTCATTGAATTCGTCTGCAATGGAGAGCTCGCAGAATCCTGATACAAACACCAATCCAAACCCTAACCCTAACCCTAACCCTAACCCCGATCGAATTCAGAATCGCGTATCGTCACCGATTGCTGCGTTATGGCCGACCATTGATGGCTCACTAGGGTTGTCGGAGGAAGAGTCGGTGAGCTATGCCCGTAGATTCTATAAATTTGGATTCGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTCCGGGATTCTCGTTCATTTCCTCGCATCCGACCCTGTGAGTTTGTCTCTCTCTGTATAATTTTGATGCACGCATCTGTACTTTCAATTATTTCTTACTTTATACTCTGTATGATGAATCGAGAATCGAATTTCTGTTCAGAGGAGAACATAATTAGACCTTATTGCTGTATTTTACCTAACCTCAATTTTCAATCATGGTAGTATTGGTTGTTGTTGAGGTTTTGGCAGTTCTACCATTACTCCATTTCTGTTTCAAAAGTTATGTTTGGATGTGTGAGGCTAAGAATCCAACCCGACCACTATCTAGAGTAATAGACGATGTTGCTGTAGATATTTATCCTTGAAAACTATAACGCTCATTGAGTCAATTGGGAGTTTCTTGATGCTATCTTTGAGGTAAAAGGGTTTAGTAGAACTTGGAAAAAGTGGATAAACGGGGGTGTTTTTGTTTGTTCGTAGCAAGTGTGATTTTGTATGTATTAAGTTTGGATTGCCTTTTCAATTGAGGTACTGTCCTAAGCCCTGGGTTATGTGTGTAATAAGGGTGTTTTTCTTTTAGATACTAAGGCCCTAGGTTCAACCCATATTCATTAATGGATGAAATAACGGGGGGCCAAAAGACCGATTACAAAATGTCATTCCAATTTTAATTTGAACCTATAACATTTGTTGTTTCTTTGACATGGCCTCGGGTTAGGAAAATCCTCTTGGGGGATTAGTATTTAGTGGAAAGGGTCATGAGCACGATCCAGGAATGGCCCCTCAGCACATCAGTGACAGTTTCTTCTTTTTTTCACACTTTCCACCCAATGCACATGATTCAGAGATTAAAATCAAAAGTGATAGTATACCTGTTGTTACTAGTGGTTTAATTTTAATTTTATTTTATATGCACAAGTGTCTTGAATAGTTTACACACACTTCAACTAGTTTCAGTTTATGATGGAAATTTGTTTGACAGTGGAATTTATGGTTGTAATGTAATAGACAATTTATTTAAGTCACCTCTGATACTGGAGTTTGGAAGACACTTTTTTGCAAAGCTGTTTTATCATTGGTAGTATAGATTCAAGTCCATTATTTGTTTGCAACAAGTTGTAGAAGTTTAGCATATCTAAGAAATCTACGTTCTTTCTTTGGTATATCTACTATGAAAAGTTTGACACTCTATAAAAGTTCAGCATCAGCATATATAAGTTAATGCTTGATGCTTTTAGTTGATCGATGGTGTGAACCGTTGGTTTTTCCAAACAAGGTAGCTGGTCTTCTAGCTTCAGAGTTGTGGGTCATCTTTTCCATGGTGTGAAAAAGACCTTTTTCTTGGCCATTAATCGAGTTTCCTTTTGGTTTCCTTAGAACGAGAGAGGTGTTTGTGGTTTCAGGAATGTTTGCACAATCAATTAATTACGACAGCTTTTTTTATTTCATTTAATTTTATCCTCAGTTAACATACCTGCCCTTTTAGAGGCTAAAGCCTATCTTCTTTGGAGAGCTTTCTTGTAATTCACCTTTTGGTGTTGGAAGCCGAATAAGCTCCTTGTACTACATTCATCGATGAAATTATTTCTCTTCTAAAAAAACGAAGTTTAGCTAGCATTTTGTAGTATAGTAATATCTCTCTTCTTGTGCGCGGGCCTAGGTAATAGAAATAGTTAGGATCAAAGCCATATGATGATCTACTGAATGTCATGGGGATATATGGTGGAGCATTCTTGATCTTTCTGATACGATTCGATCCTTGGAGTTTTGGGAATATTAGGATTATTAGTATTAGTATTTATTATTAATTGCTATTTTAATTGTATTGGGCTTGGGCCTGTTATTAGTCTTTTATTATTTGGTTTACTTGGGCAGTAAGTTAGAGGCTAGGGTTTAGGGTTATAAATAGGAGATGTTAGGTCATTGTTAGGCATCCAATTGAATTATCGTCTTTTGTACTCTGGCTCTTTGAGAGATCCTCTCGAGAGATTTATCTTAATAAAGTGATAGATTCTATCACTTTCCAACATATAGGACTAACTTATTCAACTTCTAATAATTGGTCACAACTTCATAAGGAAGTCTAAGTTAACACAGATTAACATATTTTCAGCCATGATAAGAGTAGAGATGTCCACGGGGCGGGGCAGGGCCGGGGAATGGCTTCCCCGTCCCCGGAAAAATCTCCGGGTTTTTTTTCGGGGATCGGGTCCCCGCAAGGATTTTTGCAAATTTTTTTTTTACATTTTTTTTATATTTTTTTGGACAATACTTTTAAATAATTAAATTTTCTTAGAAAATATTTATAAATTTCAACTATAATGTTAATTATTAAAGAAAAATACTTATATGCATGGATAATTTCATCAAAAAATATATTTTTATTTGAAATAAAAGAGGTAAAGTATAGAAAAAAATATTAAAAAAAAGAAAGTAATCGGGGCGTGGATCGGGGAATCGGGGACGGGGAATACATTCCCCATCCCTGGCCCCGATTAACCCATTGGGAATTTTTCTCCACCGTTCCCCCGGAGAAAACGGACATCTCTAGATAAGAGAACTGAAGAACTGTAGAGAACTGTGCAGTTTTCCTAGATTTTCTCGAGGACATTCCTTGCATAAAGATCCTTATGTCGCCTTTATGTGATCTCCTTTGTTGTTTGTTGAGGGTATGATATCTTATCTTTGGTCACAGTTTTGCTAGCTTTAGGCTATCGAGGAAAAGTGTTCATTTTTCCTTGAAACAAATTTTCAATCAAAAAGAAAATTTTCTTTTGGGAGCTCAGCCACAATGCCATAAATACTTTTGATTGGCTTCAATGCAGTTCACCTCACATGGCCTTTTCTCCACATTGCGGCACAATTTGTAAAACAACCCATGAAACTCAGAACCATTTGGAAAAAAAATAAAACACGGCCATTTGTTCATATCCTGCCATTGTGTAACAGATTTTGAGAAAAGATTTTCTCTGCTTTCAGATGGTACACAGGTTTACCGAGAGATTAATAGCCGTCTTATCTACACTTCAAATGACTATCATTTTCCGATGAAAAGAAAGTTCTTTGGATGCATCTTATCCAGGCTTTTTGGTGGTCTACTTGGAAGGAACGAAACAATCGGCTCTTTGATAAGGCCCGTTTAGGAGTAGGATAAGGAATGGTCAATCCTATTAGGAGTAGGATAAGGAATGACCAATCCTATTAGGAGTAGGATACACATATTAGACTATAAATAAGAGAGGACAGGAAAGTAAGGAGACATTGAGAAGTATTGAGATAGTGAGTATTTAGGGCTTGAGAGTGGTCTCAAGATCGGGAGGGTCCAAGTACCTTTAACACTTGGGTTAATTAGTATCTTTATTATCCTTTTATTATAATATATATTTGGTTCTTATCAATTTGGTATCAGAGCATCAATTTCTTGGGCAACATAATGACCAACACGAGAATGGAAACTCGTGTCAAAGCACTGGAAGTGAAGATGTCTGAATTAGCAGCAGAACAATCAAGATTGATCACAAAGAAGGTAGATGAAGCAATAAAACGTGGGATGGCAAAATTATTCAGAAAATTGGTTGAGCGTGAAGGAAAACAAGAATCAAGAAACAAAGGGAAAGAAATCAAGAAAGATCAAGAAAATCAGCAATACAAAGAAAAAAATAAAAAGGTGGAAGAATTCTTGATTGGGGAAAATTTCGAGAGAGAGGAAGAGGAAAAAGAGCCAAGGCTAGAAATTGTTGGGGCTGATTATGAAGATTGTTAGACAATATTAATAGCAAAGTAGAGAAAGAAAATGAGATGAGAAAATTAAGCCAAGAAATCATCATGCTAGAAAAGAAAGATCAAGAAGAGCAAAGAATCATATTCAAACATTTTATTACAAGGGAAAATAACAAATCATTAGAAAAAATAGAGGTTCGATCAAGATAAGAAACATGGTCAAAAGTGGGAATTTGGAAATTAAAGATGTTGACAGAAAAGAAAAACAAGAAACATCGATGGAAAGCTTTGTCCAAGAAGATGAAACACATCAAGAAAATGAAGAAACTAAAGTTTTGGGGTTATCGTGCAAGAACCAAATTGAGGAGAAAGAAGAAAATGCGAGAGAAAGTGGAGGAGAAAAGTCGGCGCAAATTTACTTGGCTGGAGAATAAAATTTGTTCAACTTCTAATTTGGCCACTGCCACCGCCACCTCCAGACTCTAGTCACCTGCAATATTTTTTTATTTCTTTTTATTTTTATTATTCTTTTGTAATAAACACCTTGAGGACAAGGTGTATTTTGGGGGCCGGGTAATGATAAGGTCCGTTGAGGAGTAGGATAAGGAATGGTCAATCTTATTAGGGGTAGGATAAGGAATGACCAATCCTATTAGGAGTAGGATAAACATATTAGACTATAAATAAGAGAAGATAGGAAAGTAAAGAGACAATTGAGAAGTATTGAGAAGTAGTATCTAGGGCTTGAGAGTGGTCTCAAGATCGGGAGGGTCCAAGTACCTTTAACACTTGGGTTAATTAATAGCTTTATTATCATTTTATTTAAATACATATTTGGTTCTTATCAATTAATGATAAGGCCCGTTTAGGAGTAGGATAAGGAATGGTCAATCCTATTAGGAGTAGGATAAGGAATGACCATTCCTTATCCTACTCCTAAACGGGCCTTATCATTCTTCAAAGACAAGAATCTACTTTTGATAGCTTCTTTGACAAGTTATTTTTTCTTACAATGCCTTGGTTTAAATTCACAACCTTATATAATTTTTATAATCTTTCCTCTCTTTTGTCCAATTGGATAAGTCGTATTAACAACTTAGGTTACGGCTTTGCCTTCTCATACATTAATAAAATTATTTTCATAAAATATTATGGCATGATCTTTAAAACTATTTCCTTCTATTATTTTTCCTTCCCCGCAACCAACTTTGTTCCTTCGTAAAACTATCTAACAATATGAAATTGTTCTTGTTTTAGATATTGTTGGGTCAGGTATTGGATTTGCTGTTTTCATGGTCATTATCTCTTCTTGGGCCTTGACATTTGCCATTGGTGGAGAAGGCCTGTTTGGGCCTGTTTGGGATAAACTTGTGATGTACAACCTTGCTGACAAATTAGGATTGACAGGTTGGAGCTAGTCTCTGTTTCCCCCTTCCTTTCAGCATCATTTTATAGACCTATCTTGTATATTTCAAAATGTGCAACTCTACTGTCATCCTTTTCTCCAAAGATCAAAGTTAAGCCTTTTGGTTTTACTTCTCCAAATGCTTCAAGGTTCAAACATAAACCTGGAGAGGTGCTCATTTCAGAGTTTTCTTTCACTCTTTTCAGAAACAAAAGGGATCCCAGTTGTGAACTTAATCCACATGACCAAATTTGGGTTAAAACGCGAATTCACTTTGCCATGGCAATGCTTGTTATTGGTCACTGCAAATCGGCTGTTCCTAGCTGTGCGTTTTGTGGATTGAGAACTAGACTGGATCTTTTTGTTTCTCATTTGCTTCCCTTTTCTCCTGCTTTCAATACTATAAACTGTGCCATCTTGATGACGAAATGAATATCGACGAACAATACACACATGTTTATGTGATTCATTGATGTTGATGGTGTTAGCTATCTTAACGGG

mRNA sequence

CTAAAACTAAAAATAAAATAAGAGGAGAAGAATATTTGGGCGACAAATTCGGTTACTCGTTATCTCCCAGTCATTGAATTCGTCTGCAATGGAGAGCTCGCAGAATCCTGATACAAACACCAATCCAAACCCTAACCCTAACCCTAACCCTAACCCCGATCGAATTCAGAATCGCGTATCGTCACCGATTGCTGCGTTATGGCCGACCATTGATGGCTCACTAGGGTTGTCGGAGGAAGAGTCGGTGAGCTATGCCCGTAGATTCTATAAATTTGGATTCGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTCCGGGATTCTCGTTCATTTCCTCGCATCCGACCCTATATTGTTGGGTCAGGTATTGGATTTGCTGTTTTCATGGTCATTATCTCTTCTTGGGCCTTGACATTTGCCATTGGTGGAGAAGGCCTGTTTGGGCCTGTTTGGGATAAACTTGTGATGTACAACCTTGCTGACAAATTAGGATTGACAGGTTGGAGCTAGTCTCTGTTTCCCCCTTCCTTTCAGCATCATTTTATAGACCTATCTTGTATATTTCAAAATGTGCAACTCTACTGTCATCCTTTTCTCCAAAGATCAAAGTTAAGCCTTTTGGTTTTACTTCTCCAAATGCTTCAAGGTTCAAACATAAACCTGGAGAGGTGCTCATTTCAGAGTTTTCTTTCACTCTTTTCAGAAACAAAAGGGATCCCAGTTGTGAACTTAATCCACATGACCAAATTTGGGTTAAAACGCGAATTCACTTTGCCATGGCAATGCTTGTTATTGGTCACTGCAAATCGGCTGTTCCTAGCTGTGCGTTTTGTGGATTGAGAACTAGACTGGATCTTTTTGTTTCTCATTTGCTTCCCTTTTCTCCTGCTTTCAATACTATAAACTGTGCCATCTTGATGACGAAATGAATATCGACGAACAATACACACATGTTTATGTGATTCATTGATGTTGATGGTGTTAGCTATCTTAACGGG

Coding sequence (CDS)

ATGGAGAGCTCGCAGAATCCTGATACAAACACCAATCCAAACCCTAACCCTAACCCTAACCCTAACCCCGATCGAATTCAGAATCGCGTATCGTCACCGATTGCTGCGTTATGGCCGACCATTGATGGCTCACTAGGGTTGTCGGAGGAAGAGTCGGTGAGCTATGCCCGTAGATTCTATAAATTTGGATTCGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTCCGGGATTCTCGTTCATTTCCTCGCATCCGACCCTATATTGTTGGGTCAGGTATTGGATTTGCTGTTTTCATGGTCATTATCTCTTCTTGGGCCTTGACATTTGCCATTGGTGGAGAAGGCCTGTTTGGGCCTGTTTGGGATAAACTTGTGATGTACAACCTTGCTGACAAATTAGGATTGACAGGTTGGAGCTAG

Protein sequence

MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMYNLADKLGLTGWS
Homology
[Close]
BLAST of Sed0005537 vs. NCBI nr
Match: XP_023532347.1 (probable gamma-secretase subunit PEN-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.6 bits (649), Expect = 5.2e-64
Identity = 122/136 (89.71%), Postives = 127/136 (93.38%), Query Frame = 0 

Query: 11  TNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFL 70
           ++PNPN NPN NP RIQN VSS IAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFL
Sbjct: 3   SSPNPNTNPNSNPTRIQNPVSSQIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFL 62

Query: 71  WAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGGEGLFGPVWDK 130
           WAVNCFYFWPVLRDS SFPRIRPYIVGS IGFA+FM IISSWALTF+IGGE LFGPVW+K
Sbjct: 63  WAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAIFMAIISSWALTFSIGGERLFGPVWNK 122

Query: 131 LVMYNLADKLGLTGWS 147
           LVMYNLADKLGLTGWS
Sbjct: 123 LVMYNLADKLGLTGWS 138

[Close]
BLAST of Sed0005537 vs. NCBI nr
Match: XP_022946973.1 (probable gamma-secretase subunit PEN-2 [Cucurbita moschata] >KAG7035284.1 putative gamma-secretase subunit PEN-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253.1 bits (645), Expect = 1.5e-63
Identity = 125/146 (85.62%), Postives = 130/146 (89.04%), Query Frame = 0 

Query: 1   MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFY 60
           MESSQNP+T        NPN NP+RIQN VSS IAALWPTID SLGLSEEESVSYARRFY
Sbjct: 1   MESSQNPNT--------NPNSNPNRIQNPVSSQIAALWPTIDASLGLSEEESVSYARRFY 60

Query: 61  KFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGG 120
           KFGFALLPFLWAVNCFYFWPVLRDS SFPRIRPYIVGS IGFA+FM IISSWALTF+IGG
Sbjct: 61  KFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAIFMAIISSWALTFSIGG 120

Query: 121 EGLFGPVWDKLVMYNLADKLGLTGWS 147
           E LFGPVW+KLVMYNLADKLGLTGWS
Sbjct: 121 ERLFGPVWNKLVMYNLADKLGLTGWS 138

[Close]
BLAST of Sed0005537 vs. NCBI nr
Match: XP_038900346.1 (probable gamma-secretase subunit PEN-2 [Benincasa hispida])

HSP 1 Score: 253.1 bits (645), Expect = 1.5e-63
Identity = 128/146 (87.67%), Postives = 131/146 (89.73%), Query Frame = 0 

Query: 1   MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFY 60
           MESSQNP+TNTN NPNPN      RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFY
Sbjct: 16  MESSQNPNTNTNSNPNPN------RIQNPVSSPIAVLWPTIDGSLGLSEEESVSYARRFY 75

Query: 61  KFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGG 120
           KFGFALLPFLWAVNCFYFWPVLR SRSFPRIRPYIVGS IGF VFM IISSWALTF+IGG
Sbjct: 76  KFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGG 135

Query: 121 EGLFGPVWDKLVMYNLADKLGLTGWS 147
           E LFG VWDKLVMYNLAD+LGLTGWS
Sbjct: 136 ERLFGTVWDKLVMYNLADRLGLTGWS 154

[Close]
BLAST of Sed0005537 vs. NCBI nr
Match: XP_022931973.1 (probable gamma-secretase subunit PEN-2 [Cucurbita moschata])

HSP 1 Score: 249.6 bits (636), Expect = 1.7e-62
Identity = 127/146 (86.99%), Postives = 128/146 (87.67%), Query Frame = 0 

Query: 1   MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFY 60
           ME+SQ        N N NPNPNP RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFY
Sbjct: 1   MENSQ--------NSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFY 60

Query: 61  KFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGG 120
           KFGFALLPFLWAVNCFYFWPVLR S SFPRIRPYIVGS IGFAVFM IISSWALTFAIGG
Sbjct: 61  KFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGG 120

Query: 121 EGLFGPVWDKLVMYNLADKLGLTGWS 147
           E LFGPVWDKLVMYNLADKLGLTGWS
Sbjct: 121 ERLFGPVWDKLVMYNLADKLGLTGWS 137

[Close]
BLAST of Sed0005537 vs. NCBI nr
Match: XP_022971629.1 (probable gamma-secretase subunit PEN-2 [Cucurbita maxima])

HSP 1 Score: 247.7 bits (631), Expect = 6.3e-62
Identity = 127/146 (86.99%), Postives = 128/146 (87.67%), Query Frame = 0 

Query: 1   MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFY 60
           ME+SQ        N N N NPNP RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFY
Sbjct: 1   MENSQ--------NSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFY 60

Query: 61  KFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGG 120
           KFGFALLPFLWAVNCFYFWPVLR SRSFPRIRPYIVGS IGFAVFM IISSWALTFAIGG
Sbjct: 61  KFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGG 120

Query: 121 EGLFGPVWDKLVMYNLADKLGLTGWS 147
           E LFGPVWDKLVMYNLADKLGLTGWS
Sbjct: 121 ERLFGPVWDKLVMYNLADKLGLTGWS 137

[Close]
BLAST of Sed0005537 vs. ExPASy Swiss-Prot
Match: Q9FY84 (Probable gamma-secretase subunit PEN-2 OS=Arabidopsis thaliana OX=3702 GN=At5g09310 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 6.8e-51
Identity = 98/146 (67.12%), Postives = 122/146 (83.56%), Query Frame = 0 

Query: 1   MESSQNPDTNTNP--NPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARR 60
           ME++++ D + NP  N NPNPNPNP+ +   +SS  A +WPTIDG LGL+EE SV YARR
Sbjct: 1   MEATRSDDPSLNPIRNRNPNPNPNPNPLSTIISS--AQVWPTIDGPLGLTEEASVDYARR 60

Query: 61  FYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAI 120
           FYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR Y+V S IGF+VF  ++S+WALTF+I
Sbjct: 61  FYKFGFALLPWLWFVNCFYFWPVLRHSRAFPQIRNYVVRSAIGFSVFTALLSAWALTFSI 120

Query: 121 GGEGLFGPVWDKLVMYNLADKLGLTG 145
           GGE LFGP++DKLVMYN+AD+LGL+G
Sbjct: 121 GGEQLFGPLYDKLVMYNVADRLGLSG 144

[Close]
BLAST of Sed0005537 vs. ExPASy Swiss-Prot
Match: Q5G235 (Gamma-secretase subunit PEN-2 OS=Bos taurus OX=9913 GN=PSENEN PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.1e-08
Identity = 32/94 (34.04%), Postives = 53/94 (56.38%), Query Frame = 0 

Query: 47  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFP------RIRPYIVGSGI 106
           +S EE ++  R++Y  GFA LPFLW VN F+F+   R++   P      +I+ Y+  S +
Sbjct: 6   VSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFF---REAFIVPAYTEQSQIKGYVWRSAV 65

Query: 107 GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY 135
           GF ++++++S+W   F I     + P W  L  Y
Sbjct: 66  GFFLWVIVLSTWITIFQI-----YRPRWGALGDY 91

[Close]
BLAST of Sed0005537 vs. ExPASy Swiss-Prot
Match: Q9NZ42 (Gamma-secretase subunit PEN-2 OS=Homo sapiens OX=9606 GN=PSENEN PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.3e-08
Identity = 32/94 (34.04%), Postives = 52/94 (55.32%), Query Frame = 0 

Query: 47  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFP------RIRPYIVGSGI 106
           +S EE ++  R++Y  GFA LPFLW VN F+F+   R++   P      +I+ Y+  S +
Sbjct: 6   VSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFF---REAFLVPAYTEQSQIKGYVWRSAV 65

Query: 107 GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY 135
           GF  ++++++SW   F I     + P W  L  Y
Sbjct: 66  GFLFWVIVLTSWITIFQI-----YRPRWGALGDY 91

[Close]
BLAST of Sed0005537 vs. ExPASy Swiss-Prot
Match: Q9CQR7 (Gamma-secretase subunit PEN-2 OS=Mus musculus OX=10090 GN=Psenen PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 32/94 (34.04%), Postives = 52/94 (55.32%), Query Frame = 0 

Query: 47  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSFP------RIRPYIVGSGI 106
           +S EE ++  R++Y  GFA LPFLW VN F+F+   R++   P      +I+ Y+  S +
Sbjct: 6   VSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFF---REAFLAPAYTEQSQIKGYVWRSAV 65

Query: 107 GFAVFMVIISSWALTFAIGGEGLFGPVWDKLVMY 135
           GF  +++I+++W   F I     + P W  L  Y
Sbjct: 66  GFLFWVIILATWITIFQI-----YRPRWGALGDY 91

[Close]
BLAST of Sed0005537 vs. ExPASy Swiss-Prot
Match: Q6QI68 (Gamma-secretase subunit PEN-2 OS=Rattus norvegicus OX=10116 GN=Psenen PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 29/91 (31.87%), Postives = 51/91 (56.04%), Query Frame = 0 

Query: 47  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSRSF---PRIRPYIVGSGIGFA 106
           +S EE ++  R++Y  GFA LPFLW VN F+F+     + ++    +I+ Y+  S +GF 
Sbjct: 6   VSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFKEAFFAPAYTEQSQIKGYVWRSAVGFL 65

Query: 107 VFMVIISSWALTFAIGGEGLFGPVWDKLVMY 135
            +++++++W   F I     + P W  L  Y
Sbjct: 66  FWVIVLTTWITIFQI-----YRPRWGALGDY 91

[Close]
BLAST of Sed0005537 vs. ExPASy TrEMBL
Match: A0A6J1G5B2 (probable gamma-secretase subunit PEN-2 OS=Cucurbita moschata OX=3662 GN=LOC111450992 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.3e-64
Identity = 125/146 (85.62%), Postives = 130/146 (89.04%), Query Frame = 0 

Query: 1   MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFY 60
           MESSQNP+T        NPN NP+RIQN VSS IAALWPTID SLGLSEEESVSYARRFY
Sbjct: 1   MESSQNPNT--------NPNSNPNRIQNPVSSQIAALWPTIDASLGLSEEESVSYARRFY 60

Query: 61  KFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGG 120
           KFGFALLPFLWAVNCFYFWPVLRDS SFPRIRPYIVGS IGFA+FM IISSWALTF+IGG
Sbjct: 61  KFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAIFMAIISSWALTFSIGG 120

Query: 121 EGLFGPVWDKLVMYNLADKLGLTGWS 147
           E LFGPVW+KLVMYNLADKLGLTGWS
Sbjct: 121 ERLFGPVWNKLVMYNLADKLGLTGWS 138

[Close]
BLAST of Sed0005537 vs. ExPASy TrEMBL
Match: A0A6J1F097 (probable gamma-secretase subunit PEN-2 OS=Cucurbita moschata OX=3662 GN=LOC111438306 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.0e-63
Identity = 127/146 (86.99%), Postives = 128/146 (87.67%), Query Frame = 0 

Query: 1   MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFY 60
           ME+SQ        N N NPNPNP RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFY
Sbjct: 1   MENSQ--------NSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFY 60

Query: 61  KFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGG 120
           KFGFALLPFLWAVNCFYFWPVLR S SFPRIRPYIVGS IGFAVFM IISSWALTFAIGG
Sbjct: 61  KFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGG 120

Query: 121 EGLFGPVWDKLVMYNLADKLGLTGWS 147
           E LFGPVWDKLVMYNLADKLGLTGWS
Sbjct: 121 ERLFGPVWDKLVMYNLADKLGLTGWS 137

[Close]
BLAST of Sed0005537 vs. ExPASy TrEMBL
Match: A0A6J1I943 (probable gamma-secretase subunit PEN-2 OS=Cucurbita maxima OX=3661 GN=LOC111470312 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.1e-62
Identity = 127/146 (86.99%), Postives = 128/146 (87.67%), Query Frame = 0 

Query: 1   MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFY 60
           ME+SQ        N N N NPNP RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFY
Sbjct: 1   MENSQ--------NSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFY 60

Query: 61  KFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGG 120
           KFGFALLPFLWAVNCFYFWPVLR SRSFPRIRPYIVGS IGFAVFM IISSWALTFAIGG
Sbjct: 61  KFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGG 120

Query: 121 EGLFGPVWDKLVMYNLADKLGLTGWS 147
           E LFGPVWDKLVMYNLADKLGLTGWS
Sbjct: 121 ERLFGPVWDKLVMYNLADKLGLTGWS 137

[Close]
BLAST of Sed0005537 vs. ExPASy TrEMBL
Match: A0A6J1L2H7 (probable gamma-secretase subunit PEN-2 OS=Cucurbita maxima OX=3661 GN=LOC111499803 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.0e-62
Identity = 124/146 (84.93%), Postives = 128/146 (87.67%), Query Frame = 0 

Query: 1   MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFY 60
           MESSQNP+T         PN NP+RIQN VSS IAALWPTID SLGLS EESVSYARRFY
Sbjct: 1   MESSQNPNT--------IPNSNPNRIQNPVSSQIAALWPTIDASLGLSGEESVSYARRFY 60

Query: 61  KFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGG 120
           KFGFALLPFLWAVNCFYFWPVLRDS SFPRIRPYIVGS IGFAVFM IISSWALTF+IGG
Sbjct: 61  KFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAVFMAIISSWALTFSIGG 120

Query: 121 EGLFGPVWDKLVMYNLADKLGLTGWS 147
           E LFGPVW+KLVMYNLADKLGLTGWS
Sbjct: 121 ERLFGPVWNKLVMYNLADKLGLTGWS 138

[Close]
BLAST of Sed0005537 vs. ExPASy TrEMBL
Match: A0A6J1DR09 (probable gamma-secretase subunit PEN-2 OS=Momordica charantia OX=3673 GN=LOC111023529 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.2e-59
Identity = 120/146 (82.19%), Postives = 123/146 (84.25%), Query Frame = 0 

Query: 1   MESSQNPDTNTNPNPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARRFY 60
           ME SQNP  NTNPNP              VSSPIAALWPTID SLGLSEEESVSYAR FY
Sbjct: 1   MERSQNP--NTNPNP--------------VSSPIAALWPTIDASLGLSEEESVSYARGFY 60

Query: 61  KFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAIGG 120
           KFGFALLPFLWAVNCFYFWPVLRDS SFPRIRPYIVGS IGFAVFM I+SSWALTFAIGG
Sbjct: 61  KFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAVFMAILSSWALTFAIGG 120

Query: 121 EGLFGPVWDKLVMYNLADKLGLTGWS 147
           E LFGPVWDKLVMYN+ADKLGLTGW+
Sbjct: 121 ERLFGPVWDKLVMYNVADKLGLTGWN 130

[Close]
BLAST of Sed0005537 vs. TAIR 10
Match: AT5G09310.1 (CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 201.4 bits (511), Expect = 4.8e-52
Identity = 98/146 (67.12%), Postives = 122/146 (83.56%), Query Frame = 0 

Query: 1   MESSQNPDTNTNP--NPNPNPNPNPDRIQNRVSSPIAALWPTIDGSLGLSEEESVSYARR 60
           ME++++ D + NP  N NPNPNPNP+ +   +SS  A +WPTIDG LGL+EE SV YARR
Sbjct: 1   MEATRSDDPSLNPIRNRNPNPNPNPNPLSTIISS--AQVWPTIDGPLGLTEEASVDYARR 60

Query: 61  FYKFGFALLPFLWAVNCFYFWPVLRDSRSFPRIRPYIVGSGIGFAVFMVIISSWALTFAI 120
           FYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR Y+V S IGF+VF  ++S+WALTF+I
Sbjct: 61  FYKFGFALLPWLWFVNCFYFWPVLRHSRAFPQIRNYVVRSAIGFSVFTALLSAWALTFSI 120

Query: 121 GGEGLFGPVWDKLVMYNLADKLGLTG 145
           GGE LFGP++DKLVMYN+AD+LGL+G
Sbjct: 121 GGEQLFGPLYDKLVMYNVADRLGLSG 144

The following BLAST results are available for this feature:
BLAST of Sed0005537 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023532347.15.2e-6489.71probable gamma-secretase subunit PEN-2 [Cucurbita pepo subsp. pepo][more]
XP_022946973.11.5e-6385.62probable gamma-secretase subunit PEN-2 [Cucurbita moschata] >KAG7035284.1 putati... [more]
XP_038900346.11.5e-6387.67probable gamma-secretase subunit PEN-2 [Benincasa hispida][more]
XP_022931973.11.7e-6286.99probable gamma-secretase subunit PEN-2 [Cucurbita moschata][more]
XP_022971629.16.3e-6286.99probable gamma-secretase subunit PEN-2 [Cucurbita maxima][more]
BLAST of Sed0005537 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FY846.8e-5167.12Probable gamma-secretase subunit PEN-2 OS=Arabidopsis thaliana OX=3702 GN=At5g09... [more]
Q5G2357.1e-0834.04Gamma-secretase subunit PEN-2 OS=Bos taurus OX=9913 GN=PSENEN PE=3 SV=1[more]
Q9NZ429.3e-0834.04Gamma-secretase subunit PEN-2 OS=Homo sapiens OX=9606 GN=PSENEN PE=1 SV=1[more]
Q9CQR72.1e-0734.04Gamma-secretase subunit PEN-2 OS=Mus musculus OX=10090 GN=Psenen PE=1 SV=1[more]
Q6QI682.1e-0731.87Gamma-secretase subunit PEN-2 OS=Rattus norvegicus OX=10116 GN=Psenen PE=3 SV=1[more]
BLAST of Sed0005537 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G5B27.3e-6485.62probable gamma-secretase subunit PEN-2 OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A6J1F0978.0e-6386.99probable gamma-secretase subunit PEN-2 OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A6J1I9433.1e-6286.99probable gamma-secretase subunit PEN-2 OS=Cucurbita maxima OX=3661 GN=LOC1114703... [more]
A0A6J1L2H74.0e-6284.93probable gamma-secretase subunit PEN-2 OS=Cucurbita maxima OX=3661 GN=LOC1114998... [more]
A0A6J1DR093.2e-5982.19probable gamma-secretase subunit PEN-2 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
BLAST of Sed0005537 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09310.14.8e-5267.12CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenili... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019379Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunitPFAMPF10251PEN-2coord: 49..136
e-value: 3.0E-29
score: 101.3
IPR019379Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunitPANTHERPTHR16318GAMMA-SECRETASE SUBUNIT PEN-2coord: 22..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0005537.1Sed0005537.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007219 Notch signaling pathway
cellular_component GO:0070765 gamma-secretase complex
cellular_component GO:0005798 Golgi-associated vesicle
cellular_component GO:0016021 integral component of membrane