Sed0005477 (gene) Chayote v1

Overview


Name	Sed0005477
Type	gene
Organism	Sechium edule (Chayote v1)
Description	plastoglobulin-1, chloroplastic
Location	LG04: 7530046 .. 7532977 (-)
RNA-Seq Expression	Sed0005477
Synteny	Sed0005477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGCATAAAATTTGTGGCTTATTCCAACGGTTAACGAAGCTCACAAAAATGGCTTCTCTGTTGTCTTCTTCACAGCGAACCGTCTTCTTCACTGCAAACCCTAAATCCCCACTCTTCTCCCCTCTCCCAACCACTCCCATCCCATCGTTTCTCTCCTTCAAACAACCCGAACCCCTCCGATTCCCCTCCCTTCGCCTGAGCTCCTCCCTCTCCGACGCCGCTTCCACCGGCGAAAACGACGCCGCCTCCGCCGCTCCTCTCCCCAACATCTCCGACGAGTGGGGCGAAGTGTCCGAGCCGGATCCCGACTCTTCGTTCTCCAGATTCTCCGAGTTCGATCCGCCCAAGGAAGACGACGAGTGGGGCGGGGATGGCGCTGCTAATGGAAAAGCTCCCATGCTGGAGGAGGATGTGGACGACAAGCTTTTTGATCTGAAGAGATGCTTGGTCGATACGGTTTACGGGACCGAGTTTGGATTTAGGGCTGGAGTCGAGGAACGTGCCGAGGTTTTGGAGATTGTGAACCAATTGGAGGCGGCCAATCCGAATCCGGCCTCGGTCGAGGCCTCTGAACTTCTCGATGGCAACTGGATTCTACTGTAAGTATTTTCCATCTATAATCTGAGATTCATAATTAGCAAATCTATAGAAGAAGAGAACAGCCATAGCATTAAATTCCTTATCGAATATTAATATCGAAATCGAGAGCTCGTTTCCGGATTAATGGAGTTTCGTAACATTAGAACAACAATGTAGGAATGTTGGTTCTGAATGCTATGGTTGAAACTTGAATTAGGTATACTGCATTTTCTGAGCTGCTGCCACTTCTAGCATTAGGAACATTGCCATTGGTAAAAGTGGAGAAGATTACTCAAGAAATCGACTCGAATACGCTTACTATTGTGAACTCCACCACTCTGTCCAGCCCATTTACCACATTTTCTTTCAGTGCTTCAGCTGCTTTTGAAGTTCGGTCTCCTTCAAGGATACAGGTGCTTTTACTGCATAATTTATCACATTAAACTTACCAAGTGTTTTTTTGTATAGGAAACAATTTCATTATAAATATGAAATTAGTGGCAAATGCCAGTTACAAAAGGGATCTCCAATTGTTCAATAGAGAGTCAAAGCTGTAATCATTAAAAGGAGGAGATCTCTTACACCAGGAAACAACAGTAATAGATAAGTTAACCCAAAAATTCATAAGATTAGTGCAATGTTTCTTTTTGCCCCTTTTTTGTTTTTTGTTTTTTAGCTTTATGTTCTGTGTTTTTGTTACCTTTTTAAAGGAAAAAGTGTATCTCTTACCTTTTGTTTGTCCCATTTGTTGCAATGAAAAGAAACCAAATGTATTTTCTCTGTATTATCTTACTTTTGAATAAAATCTTATCATTCATGTCATCTAAACGAAGAAGATGATAAGTTCTTTAAAATGTGAAACAAGAAACATTTCAGGGAGTTCTTCTAGAAAAGGAACAAGTAATGGAAAAACCCTGTTTCCAAAAAATTAGAGAAAGAATTGGGATTAGCATTGGCTTGAGATTGATTCTCAACAAACTAGGCGGGTGGTGAATAAATTTGTGGGTTCTAGTGGATGCGCCATTTCCACTTCAATCTTTCTGTAACAATCAAGTTTTGGGCCTAAGAATAAGAATGTTTAATTAAAATTCTTTCTGCAGAGTACCTTTTGCCAGGCTTATGTTAAGAACCCTAAATTACAAGAACACAAGCTAGAAATAATGAAATATATTACAATATCGTAAAGAAGTTACAATATTGTAATGGCGTTTCGAGAGGGTTATCTCTCTCTAATCTCACCGTGGGTTATTCCACTAAAATGATCCATACCAATTAAGAACCTAAAACTTCTATTTATAACCAAGACTCCTTATCAAATAACCAATATGCTAATATGTAACGAATCTCTCACATAATTTTCAAAAAAAAAAAAAACTAATCTCTCACATACAACCCACACAAGTACTCTCACAGCTTAATCGTCTTAGAACTTTATGTCAAGTCGTATCTGGAACTTGAACCCATCGTTATTTTTTAGATAAGTAACAATTTCATTGATGTATGAGAAATTACAAAAGAAGATGAAATCTCGGGGAGGATATTACAAAAGATATCTCCATTTCCATAGACCGTAGTAATGGTATAACTACAGTAATGAATGAGTGAATTTCATTTAAACCAAATGAAACGCAGGCTTTTAATTTCTTCATGTAAGTAATCTTCTTGATTATGATTATTGGATGAGCCATAGTTTCTGTAAAAAATGAATTTTTATTGAACATGTGTTATTGTATGTGCCAACAATCTTAGTGCTAATTTCTCTGCTTTTTGGAGGATTTTAAATCTGACTGGTTTTCATTAAATTATGTGCAGGTTCAATTCAAAGAAGGTATTCTGCAACCTCCTGAGATTAAGTCAAGTCTTGATCTTCCCGAAAATATCGATATATTTGGACAGAGAGTTAACTTATCTCCTGTGCAACAAACTCTTAATCCAATACAGCAATCAATAGCAAGTCTATTCCAGGTTATTTCTGGTCAGCCTCCCCTCAAGATTCCCATTCCGGGTAATCGCAATAGTTCCTGGCTACTTATAACATACCTCGATGAAGATCTTCGAATCTCGAGGGGTGATGGTGGTTTTTTTGTTCTTGTTAAAGAAGGGAGTGCTCTACTTGATCAGTGAAACCAGGTACTTTCTGCAGTGATACAAAAATGCACCAGTCTGTTATGTACTTGCTTAATTCTTAAATATCAAGTTGCAACACTACTTTTTTTATGAGTATAGCATGAAGATATATTAATCATTCTCGTACCGCCCTTGCTAATTTCTAATATGTGAAGGGGGATTAGAAAAAAGAAGGATGAATCAGCATTATTTTAGAATTATGTAATAAATGTGCGAGAATGGTCT

mRNA sequence

ATCGCATAAAATTTGTGGCTTATTCCAACGGTTAACGAAGCTCACAAAAATGGCTTCTCTGTTGTCTTCTTCACAGCGAACCGTCTTCTTCACTGCAAACCCTAAATCCCCACTCTTCTCCCCTCTCCCAACCACTCCCATCCCATCGTTTCTCTCCTTCAAACAACCCGAACCCCTCCGATTCCCCTCCCTTCGCCTGAGCTCCTCCCTCTCCGACGCCGCTTCCACCGGCGAAAACGACGCCGCCTCCGCCGCTCCTCTCCCCAACATCTCCGACGAGTGGGGCGAAGTGTCCGAGCCGGATCCCGACTCTTCGTTCTCCAGATTCTCCGAGTTCGATCCGCCCAAGGAAGACGACGAGTGGGGCGGGGATGGCGCTGCTAATGGAAAAGCTCCCATGCTGGAGGAGGATGTGGACGACAAGCTTTTTGATCTGAAGAGATGCTTGGTCGATACGGTTTACGGGACCGAGTTTGGATTTAGGGCTGGAGTCGAGGAACGTGCCGAGGTTTTGGAGATTGTGAACCAATTGGAGGCGGCCAATCCGAATCCGGCCTCGGTCGAGGCCTCTGAACTTCTCGATGGCAACTGGATTCTACTGTATACTGCATTTTCTGAGCTGCTGCCACTTCTAGCATTAGGAACATTGCCATTGGTAAAAGTGGAGAAGATTACTCAAGAAATCGACTCGAATACGCTTACTATTGTGAACTCCACCACTCTGTCCAGCCCATTTACCACATTTTCTTTCAGTGCTTCAGCTGCTTTTGAAGTTCGGTCTCCTTCAAGGATACAGGTTCAATTCAAAGAAGGTATTCTGCAACCTCCTGAGATTAAGTCAAGTCTTGATCTTCCCGAAAATATCGATATATTTGGACAGAGAGTTAACTTATCTCCTGTGCAACAAACTCTTAATCCAATACAGCAATCAATAGCAAGTCTATTCCAGGTTATTTCTGGTCAGCCTCCCCTCAAGATTCCCATTCCGGGTAATCGCAATAGTTCCTGGCTACTTATAACATACCTCGATGAAGATCTTCGAATCTCGAGGGGTGATGGTGGTTTTTTTGTTCTTGTTAAAGAAGGGAGTGCTCTACTTGATCAGTGAAACCAGGTACTTTCTGCAGTGATACAAAAATGCACCAGTCTGTTATGTACTTGCTTAATTCTTAAATATCAAGTTGCAACACTACTTTTTTTATGAGTATAGCATGAAGATATATTAATCATTCTCGTACCGCCCTTGCTAATTTCTAATATGTGAAGGGGGATTAGAAAAAAGAAGGATGAATCAGCATTATTTTAGAATTATGTAATAAATGTGCGAGAATGGTCT

Coding sequence (CDS)

ATGGCTTCTCTGTTGTCTTCTTCACAGCGAACCGTCTTCTTCACTGCAAACCCTAAATCCCCACTCTTCTCCCCTCTCCCAACCACTCCCATCCCATCGTTTCTCTCCTTCAAACAACCCGAACCCCTCCGATTCCCCTCCCTTCGCCTGAGCTCCTCCCTCTCCGACGCCGCTTCCACCGGCGAAAACGACGCCGCCTCCGCCGCTCCTCTCCCCAACATCTCCGACGAGTGGGGCGAAGTGTCCGAGCCGGATCCCGACTCTTCGTTCTCCAGATTCTCCGAGTTCGATCCGCCCAAGGAAGACGACGAGTGGGGCGGGGATGGCGCTGCTAATGGAAAAGCTCCCATGCTGGAGGAGGATGTGGACGACAAGCTTTTTGATCTGAAGAGATGCTTGGTCGATACGGTTTACGGGACCGAGTTTGGATTTAGGGCTGGAGTCGAGGAACGTGCCGAGGTTTTGGAGATTGTGAACCAATTGGAGGCGGCCAATCCGAATCCGGCCTCGGTCGAGGCCTCTGAACTTCTCGATGGCAACTGGATTCTACTGTATACTGCATTTTCTGAGCTGCTGCCACTTCTAGCATTAGGAACATTGCCATTGGTAAAAGTGGAGAAGATTACTCAAGAAATCGACTCGAATACGCTTACTATTGTGAACTCCACCACTCTGTCCAGCCCATTTACCACATTTTCTTTCAGTGCTTCAGCTGCTTTTGAAGTTCGGTCTCCTTCAAGGATACAGGTTCAATTCAAAGAAGGTATTCTGCAACCTCCTGAGATTAAGTCAAGTCTTGATCTTCCCGAAAATATCGATATATTTGGACAGAGAGTTAACTTATCTCCTGTGCAACAAACTCTTAATCCAATACAGCAATCAATAGCAAGTCTATTCCAGGTTATTTCTGGTCAGCCTCCCCTCAAGATTCCCATTCCGGGTAATCGCAATAGTTCCTGGCTACTTATAACATACCTCGATGAAGATCTTCGAATCTCGAGGGGTGATGGTGGTTTTTTTGTTCTTGTTAAAGAAGGGAGTGCTCTACTTGATCAGTGA

Protein sequence

MASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSFKQPEPLRFPSLRLSSSLSDAASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGDGAANGKAPMLEEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPASVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLNPIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSALLDQ

Homology

[Close]

BLAST of Sed0005477 vs. NCBI nr
Match: XP_022923348.1 (plastoglobulin-1, chloroplastic [Cucurbita moschata] >KAG6577728.1 Plastid lipid-associated protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 560.8 bits (1444), Expect = 8.1e-156
Identity = 300/363 (82.64%), Postives = 322/363 (88.71%), Query Frame = 0


Query: 1   MASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSFKQPE----PLRFPSLRLSSSLSD 60
           MASLLSSS+ +VFFTANPK PLFS LP+  +PSFLSF  P      LRFPSLRLSSSLSD
Sbjct: 1   MASLLSSSKSSVFFTANPKFPLFSSLPSVSVPSFLSFNLPRKDSGTLRFPSLRLSSSLSD 60

Query: 61  AASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGDG---AANG 120
            AS+G+ DAA +   P I+DEWGE +E DPDSSFSRFSEFDPPK+DDEWGGDG     NG
Sbjct: 61  DASSGDEDAAGSR--PGITDEWGEEAESDPDSSFSRFSEFDPPKDDDEWGGDGYGDGGNG 120

Query: 121 KAPML----EEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPA 180
           KA ++    EE VDDKLF+LKRCLVDTVYGTE GFRAG+EERAEVLEIVNQLEAANP PA
Sbjct: 121 KAAVVEDKSEEFVDDKLFELKRCLVDTVYGTEIGFRAGLEERAEVLEIVNQLEAANPTPA 180

Query: 181 SVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF 240
            VEA ELLDGNWIL+YTAFSELLPLLALGTLPLVKVEKITQEIDSNTLT+VNSTTLSSPF
Sbjct: 181 PVEAPELLDGNWILVYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTVVNSTTLSSPF 240

Query: 241 TTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLN 300
           TTFSFSASAAFEVR+PSRIQVQFKEGILQPPEIKS LDLPENIDIFGQ++NLSPVQQTL+
Sbjct: 241 TTFSFSASAAFEVRTPSRIQVQFKEGILQPPEIKSRLDLPENIDIFGQKINLSPVQQTLD 300

Query: 301 PIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSAL 353
           PIQQ+IASLFQ ISGQPPLKIPIPG+RN SWLLITYLDEDLRISRGDGG FVLVKEGSAL
Sbjct: 301 PIQQAIASLFQAISGQPPLKIPIPGDRNRSWLLITYLDEDLRISRGDGGLFVLVKEGSAL 360

[Close]

BLAST of Sed0005477 vs. NCBI nr
Match: XP_022145450.1 (plastoglobulin-1, chloroplastic [Momordica charantia])

HSP 1 Score: 558.5 bits (1438), Expect = 4.0e-155
Identity = 304/363 (83.75%), Postives = 319/363 (87.88%), Query Frame = 0


Query: 1   MASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSF----KQPEPLRFPSLRLSSSLSD 60
           MASLLSSSQ +VFFTANPK PL SPL     PSFLSF    K+  P RFPSLRLSSSLSD
Sbjct: 1   MASLLSSSQCSVFFTANPKLPLLSPL-----PSFLSFTPSHKESTPFRFPSLRLSSSLSD 60

Query: 61  AASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGD---GAANG 120
            ASTG +DA  A P  NISDEWGE +EPDPDSSF+RFSEFDPPK+DDEWGGD   G  NG
Sbjct: 61  DASTGTDDA--AGPRANISDEWGEEAEPDPDSSFTRFSEFDPPKDDDEWGGDGYSGEGNG 120

Query: 121 KAPMLE----EDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPA 180
           +A  +E    E VDDKL +LKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANP PA
Sbjct: 121 RASAVEDKSGESVDDKLLELKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPTPA 180

Query: 181 SVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF 240
            VEA ELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF
Sbjct: 181 PVEAPELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF 240

Query: 241 TTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLN 300
           TTFSFSASAAFEVR+PSRIQVQFKEGILQPPEIKS LDLPENIDIFGQRVNLSPVQQTL+
Sbjct: 241 TTFSFSASAAFEVRTPSRIQVQFKEGILQPPEIKSRLDLPENIDIFGQRVNLSPVQQTLD 300

Query: 301 PIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSAL 353
           PIQQ+IASLFQVISGQPPLKIPIPG+RN SWLL TYLD+DLRISRGDGG FVLVKEGS L
Sbjct: 301 PIQQAIASLFQVISGQPPLKIPIPGDRNRSWLLTTYLDQDLRISRGDGGLFVLVKEGSTL 356

[Close]

BLAST of Sed0005477 vs. NCBI nr
Match: XP_023552507.1 (plastoglobulin-1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023552508.1 plastoglobulin-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 558.1 bits (1437), Expect = 5.3e-155
Identity = 300/363 (82.64%), Postives = 322/363 (88.71%), Query Frame = 0


Query: 1   MASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSFKQPE----PLRFPSLRLSSSLSD 60
           MASLLSSS+ +VFFTANPK PLFS LP+  +PSFLSF  P      LRFPSLRLSSSLSD
Sbjct: 1   MASLLSSSKTSVFFTANPKFPLFSSLPSVSVPSFLSFNLPRKDSGTLRFPSLRLSSSLSD 60

Query: 61  AASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGDGAA---NG 120
            AS+G+ DAA +   P I+DEWGE +E DPDSSFSRFSEFDPPK+DDEWGGDG A   NG
Sbjct: 61  DASSGDEDAAGSR--PGITDEWGEEAESDPDSSFSRFSEFDPPKDDDEWGGDGYADGGNG 120

Query: 121 KAPML----EEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPA 180
           KA ++    EE VDDKLF+LKRCLVDTVYGTE GFRAG+EERAEVLEIVNQLEAANP PA
Sbjct: 121 KAAVVEDKSEEFVDDKLFELKRCLVDTVYGTEIGFRAGLEERAEVLEIVNQLEAANPTPA 180

Query: 181 SVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF 240
            VEA  LLDGNWIL+YTAFSELLPLLALGTLPLVKVEKITQEIDSNTLT+VNS TLSSPF
Sbjct: 181 PVEAPGLLDGNWILVYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTVVNSITLSSPF 240

Query: 241 TTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLN 300
           TTFSFSASAAFEVR+PSRIQVQFKEGILQPPEIKS LDLPENIDIFGQ++NLSPVQQTL+
Sbjct: 241 TTFSFSASAAFEVRTPSRIQVQFKEGILQPPEIKSRLDLPENIDIFGQKINLSPVQQTLD 300

Query: 301 PIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSAL 353
           PIQQ+IASLFQVISGQPPLKIPIPG+RN SWLLITYLDEDLRISRGDGG FVLVKEGSAL
Sbjct: 301 PIQQAIASLFQVISGQPPLKIPIPGDRNRSWLLITYLDEDLRISRGDGGLFVLVKEGSAL 360

[Close]

BLAST of Sed0005477 vs. NCBI nr
Match: KAG7015764.1 (Plastid lipid-associated protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 554.7 bits (1428), Expect = 5.8e-154
Identity = 297/363 (81.82%), Postives = 319/363 (87.88%), Query Frame = 0


Query: 1   MASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSFKQPE----PLRFPSLRLSSSLSD 60
           MASLLSSS+ +VFFTANPK PLFS LP+  +PSFLSF  P      LRFPSLRLSSSLSD
Sbjct: 1   MASLLSSSKSSVFFTANPKFPLFSSLPSVSVPSFLSFNLPRKDSGTLRFPSLRLSSSLSD 60

Query: 61  AASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGDG---AANG 120
            AS+G+ DAA +   P I+DEWGE +E DPDSSFSRFSEFDPPK+DDEWGGDG     NG
Sbjct: 61  DASSGDEDAAGSR--PGITDEWGEEAESDPDSSFSRFSEFDPPKDDDEWGGDGYGDGGNG 120

Query: 121 KAPML----EEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPA 180
           KA ++    EE VDDKLF+LKRCLVDTVYGTE GFRAG+EERAEVLEIVNQLEAANP PA
Sbjct: 121 KAAVVEDKSEEFVDDKLFELKRCLVDTVYGTEIGFRAGLEERAEVLEIVNQLEAANPTPA 180

Query: 181 SVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF 240
            VEA ELLDGNWIL+YTAFSELLPLLALGTLPLVKVEKITQEIDSNT T+VNS TLSSPF
Sbjct: 181 PVEAPELLDGNWILVYTAFSELLPLLALGTLPLVKVEKITQEIDSNTFTVVNSITLSSPF 240

Query: 241 TTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLN 300
           TTFSFSASAAFEVR+PSRIQVQFKEGILQPPEIKS LDLPENIDIFGQ++NLSPVQQTL+
Sbjct: 241 TTFSFSASAAFEVRTPSRIQVQFKEGILQPPEIKSRLDLPENIDIFGQKINLSPVQQTLD 300

Query: 301 PIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSAL 353
           PIQQ+IASLFQ I GQPPLKIPIPG+RN SWLLITYLDEDLRISRGDGG FVLVKEGSAL
Sbjct: 301 PIQQAIASLFQAILGQPPLKIPIPGDRNRSWLLITYLDEDLRISRGDGGLFVLVKEGSAL 360

[Close]

BLAST of Sed0005477 vs. NCBI nr
Match: XP_038906135.1 (plastoglobulin-1, chloroplastic [Benincasa hispida])

HSP 1 Score: 553.5 bits (1425), Expect = 1.3e-153
Identity = 300/360 (83.33%), Postives = 319/360 (88.61%), Query Frame = 0


Query: 1   MASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSF----KQPEPLRFPSLRLSSSLSD 60
           MAS LSSS+ ++FFTANPK PLFSPLPT   PSFLSF    KQ   LRFPSLRLSSSLSD
Sbjct: 1   MASPLSSSRCSLFFTANPKFPLFSPLPTISFPSFLSFNLSHKQSGALRFPSLRLSSSLSD 60

Query: 61  AASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGDGAANGKAP 120
            AST   DA  +   P I+DEWGE +EPDPDSS +RF EFDPPKEDDEWGGD   NGKA 
Sbjct: 61  DASTTNEDAEDSR--PKITDEWGEEAEPDPDSSLTRFPEFDPPKEDDEWGGD-VGNGKAA 120

Query: 121 ML----EEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPASVE 180
           ++    EE VDDKLF+LKRCLVDTVYGTEFGFRAG+EERAEVLEIVNQLEAANP PA VE
Sbjct: 121 VVEDKSEEYVDDKLFELKRCLVDTVYGTEFGFRAGLEERAEVLEIVNQLEAANPTPAPVE 180

Query: 181 ASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPFTTF 240
           AS LLDGNWILLYTAFSELLPLLALG+LPLVKVEKITQ+IDSNTLTIVNSTTLSSPFTTF
Sbjct: 181 ASGLLDGNWILLYTAFSELLPLLALGSLPLVKVEKITQKIDSNTLTIVNSTTLSSPFTTF 240

Query: 241 SFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLNPIQ 300
           SFSASAAFEVR+PSRIQVQFKEGILQPPEIKS LDLPENIDIFGQ+VNLSPVQQTL+PIQ
Sbjct: 241 SFSASAAFEVRTPSRIQVQFKEGILQPPEIKSRLDLPENIDIFGQKVNLSPVQQTLDPIQ 300

Query: 301 QSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSALLDQ 353
           Q+IASLFQVISGQPPLKIPIPG+RN SWLLITYLD+DLRISRGDGG FVLVKEGSALLDQ
Sbjct: 301 QTIASLFQVISGQPPLKIPIPGDRNRSWLLITYLDKDLRISRGDGGLFVLVKEGSALLDQ 357

[Close]

BLAST of Sed0005477 vs. ExPASy Swiss-Prot
Match: Q94KU5 (Plastid lipid-associated protein 3, chloroplastic OS=Brassica campestris OX=3711 GN=PAP3 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.7e-100
Identity = 210/368 (57.07%), Postives = 256/368 (69.57%), Query Frame = 0


Query: 1   MASLLSSSQRTVFFTANPK---SPLFSPLPTTPIPSFLSFKQPEPLRFPSLRLS-SSLSD 60
           MA+L + +  +  F ANP    SP  S  P     S    + P PLRF  +R S  S SD
Sbjct: 1   MATLFTVTTTSRPFPANPSKTFSPSISLKPNALSFSLTHHRPPRPLRFSKIRSSLPSESD 60

Query: 61  AA---------STGENDAASAAPLPN----ISDEWGEVSEPDPDSSFSRFSEFDPPKEDD 120
           +            GE  A   +P  N    +SDEWGE SE  P+ S +RF+E DPP  +D
Sbjct: 61  SEPEGGYSITDEWGEQPAEPESPPDNAPSAVSDEWGEKSESVPEESVTRFAESDPPTNED 120

Query: 121 EWGGDGAANGKAPMLEEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEA 180
           EW    A +G          DK ++LKRCL DTVYGTE GFRAG E RAEVLEIVNQLEA
Sbjct: 121 EWEEREADDGV---------DKTWELKRCLADTVYGTELGFRAGSEVRAEVLEIVNQLEA 180

Query: 181 ANPNPASVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNST 240
            NP  A VE  ELLDGNW+LLYTAFSELLPLLA G+ PL+KV+ I+Q ID+ +L+I NST
Sbjct: 181 LNPTQAPVENPELLDGNWVLLYTAFSELLPLLAAGSTPLLKVKSISQSIDTKSLSIDNST 240

Query: 241 TLSSPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSP 300
           TLSSPF  FSFSA+A+FEVR+PSRI+V FKEG L+PPEIKSS+DLPE++ +FGQ +NLS 
Sbjct: 241 TLSSPFADFSFSATASFEVRTPSRIEVSFKEGTLKPPEIKSSVDLPESVGVFGQEINLSF 300

Query: 301 VQQTLNPIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLV 352
           ++Q+LNP+Q   A++ + ISGQPPLK+P PGNR SSWLL TYLD+DLRISRGDGG FVL 
Sbjct: 301 LKQSLNPLQDVAANISRAISGQPPLKLPFPGNRGSSWLLTTYLDKDLRISRGDGGLFVLA 359

[Close]

BLAST of Sed0005477 vs. ExPASy Swiss-Prot
Match: Q9ZP40 (Plastoglobulin-1, chloroplastic OS=Pisum sativum OX=3888 GN=PG1 PE=1 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.5e-99
Identity = 210/371 (56.60%), Postives = 261/371 (70.35%), Query Frame = 0


Query: 1   MASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSFKQPEPLRFPSLRLSSSLSDAAST 60
           MA L S+ +  + F+ NPK    S L +     +LS + P   RFPSLR    +S A  T
Sbjct: 1   MALLSSTLRAPLVFSKNPKPVSLSSLHSR---IYLSPRSP---RFPSLRF---ISAAGDT 60

Query: 61  GENDAASAAPLPNISDEWGEVSEPDPDS-SFSRFSEFDPPKEDDEWGGDGAA-------- 120
           G+    +  P  NISDEWGE SEP+    ++ +  + DPPK++DEWG   AA        
Sbjct: 61  GD----AEKPSSNISDEWGEGSEPETKPFTYFKLPDSDPPKDEDEWGKGAAAGAGSYNDA 120

Query: 121 -NGKAPM---------LEEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQL 180
            NG              E+ VD+ L  LKR LVDTVYGTE GFRA  E RAEV E V QL
Sbjct: 121 GNGTPTFAAEASPEAEAEDGVDENLEGLKRSLVDTVYGTELGFRARSEVRAEVSEFVAQL 180

Query: 181 EAANPNPASVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVN 240
           EAANP PA VE  +LL+GNW+LLYTA SELLPLLA G+LPL+K++KI+Q ID+++ T+VN
Sbjct: 181 EAANPTPAPVEEPDLLNGNWVLLYTASSELLPLLAAGSLPLLKLDKISQTIDTDSFTVVN 240

Query: 241 STTLSSPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNL 300
           STTLSSPF +FSFS SA+FEVRSP+RIQV FKEG LQPPEIKS +DLPENI+IFGQ+++L
Sbjct: 241 STTLSSPFASFSFSVSASFEVRSPTRIQVTFKEGSLQPPEIKSKIDLPENINIFGQQLSL 300

Query: 301 SPVQQTLNPIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFV 353
            P+ Q+L P++  +A++ +VISGQ PLKIPIPG R SSWL+ TYLD+DLRISRGDGG FV
Sbjct: 301 GPLLQSLGPLENVVANISRVISGQSPLKIPIPGERTSSWLITTYLDKDLRISRGDGGLFV 358

[Close]

BLAST of Sed0005477 vs. ExPASy Swiss-Prot
Match: O82291 (Probable plastid-lipid-associated protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP3 PE=1 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.8e-98
Identity = 209/380 (55.00%), Postives = 261/380 (68.68%), Query Frame = 0


Query: 11  TVFFTANPKSPL----------FSPLPTTPIPSFLSFK---QPEPLRFPSLRLS------ 70
           T+F  A P S L          FSP  +  + S LSF    +P+PLRF  +R S      
Sbjct: 3   TLFTVARPSSLLYVSSINPSKTFSPSISLKLNS-LSFSFGYRPKPLRFSKIRSSLPSESE 62

Query: 71  --SSLSDAASTGE-----NDAASAAPLPN------ISDEWGEVSEPDPDSSFSRFSEFDP 130
             S L  +A T E      DA      P+      I+DEWGE S P+ + S +RF E DP
Sbjct: 63  SESDLDASAVTDEWGEKPGDANEPDSQPDNVTVNVITDEWGEKSGPELEESGTRFMESDP 122

Query: 131 PKEDDEWGGD-------GAANGKAPMLEEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEER 190
           P+ +DEWGG+        A NG A      V D  ++LKRCL D+VYGTE GF+AG E R
Sbjct: 123 PRNEDEWGGEIGGETEADAGNGSA------VSDPTWELKRCLADSVYGTELGFKAGSEVR 182

Query: 191 AEVLEIVNQLEAANPNPASVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQE 250
           AEVLE+VNQLEA NP PA +E  ELLDGNW+LLYTAFSEL+PLLA G+ PL+KV+ I+Q 
Sbjct: 183 AEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSISQS 242

Query: 251 IDSNTLTIVNSTTLSSPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPEN 310
           ID+N L I NSTTLSSPF  FSFSA+A+FEVRSPSRI+V FKEG L+PP IKSS+DLPE+
Sbjct: 243 IDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDLPES 302

Query: 311 IDIFGQRVNLSPVQQTLNPIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLR 352
           + +FGQ+++LS ++Q+LNP+Q   A++ + +SGQPPLK+P PGNR SSWLL TYLD+DLR
Sbjct: 303 VGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLTTYLDKDLR 362

[Close]

BLAST of Sed0005477 vs. ExPASy Swiss-Prot
Match: Q7XBW5 (Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAP3 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 5.8e-96
Identity = 178/282 (63.12%), Postives = 225/282 (79.79%), Query Frame = 0


Query: 74  ISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGDGAANGKAPML--EEDVDDKLFDLKR 133
           ++DEWGE   P+P S+    S  DPP  DDEWGGD A     P +  E++ +++  +LKR
Sbjct: 96  VTDEWGEPGVPEPQST----SAADPPTNDDEWGGDPAPPPPPPPVPEEDNEEERREELKR 155

Query: 134 CLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPASVEASELLDGNWILLYTAFSEL 193
           CLVDTVYG++ GFRA  E R EVLE+V QLEA NP P  V+A+ LL GNWIL+YTA+SEL
Sbjct: 156 CLVDTVYGSDLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYSEL 215

Query: 194 LPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPFTTFSFSASAAFEVRSPSRIQVQ 253
           LP+LA+G  PL KV++I+QEID+N++TIVN++T+SSPF +FSFSA+A+F+V+SPSRI+VQ
Sbjct: 216 LPILAVGAAPLFKVDEISQEIDTNSMTIVNASTISSPFASFSFSATASFDVQSPSRIEVQ 275

Query: 254 FKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLNPIQQSIASLFQVISGQPPLKIP 313
           FKEG  QPP+I SS+DLP  +DIFGQ+++L PVQQ LNP+QQ+ AS+   ISGQPPLK+P
Sbjct: 276 FKEGSFQPPKISSSVDLPAEVDIFGQKISLGPVQQVLNPLQQAFASIAGSISGQPPLKLP 335

Query: 314 IPG-NRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSALLDQ 353
           IPG NR  SWLL TYLD+DLRISRGDGG F+LVKEGS LLDQ
Sbjct: 336 IPGNNRARSWLLTTYLDKDLRISRGDGGLFILVKEGSPLLDQ 373

[Close]

BLAST of Sed0005477 vs. ExPASy Swiss-Prot
Match: O81439 (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP1 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.9e-62
Identity = 120/258 (46.51%), Postives = 176/258 (68.22%), Query Frame = 0


Query: 102 DDEWGGDGAANGKAPMLEEDVDDKLFD-------LKRCLVDTVYGTEFGFRAGVEERAEV 161
           DDEWG DG     A      V DK  +       LKR L D++YGT+ G     + RAE+
Sbjct: 60  DDEWGQDGVERVFASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSVSSDTRAEI 119

Query: 162 LEIVNQLEAANPNPASVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDS 221
            E++ QLE+ NP PA  EA  LL+G WIL YT+F  L PLL+    PLVKV++I+Q IDS
Sbjct: 120 SELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVDEISQTIDS 179

Query: 222 NTLTIVNSTTLSSPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDI 281
           ++ T+ NS   + PF+T SFS +A FE+RSP R+Q++F++G++  P++  S+++PE++++
Sbjct: 180 DSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEV 239

Query: 282 FGQRVNLSPVQQTLNPIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISR 341
            GQ+++L+P++  L  +Q + +S+ + IS QPPLK  +P +   SWLL TYLD+DLRISR
Sbjct: 240 LGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISR 299

Query: 342 GDGG-FFVLVKEGSALLD 352
           GDGG  +VL+KEGS+LL+
Sbjct: 300 GDGGSVYVLIKEGSSLLN 317

[Close]

BLAST of Sed0005477 vs. ExPASy TrEMBL
Match: A0A6J1E9A3 (plastoglobulin-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431070 PE=3 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.9e-156
Identity = 300/363 (82.64%), Postives = 322/363 (88.71%), Query Frame = 0


Query: 1   MASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSFKQPE----PLRFPSLRLSSSLSD 60
           MASLLSSS+ +VFFTANPK PLFS LP+  +PSFLSF  P      LRFPSLRLSSSLSD
Sbjct: 1   MASLLSSSKSSVFFTANPKFPLFSSLPSVSVPSFLSFNLPRKDSGTLRFPSLRLSSSLSD 60

Query: 61  AASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGDG---AANG 120
            AS+G+ DAA +   P I+DEWGE +E DPDSSFSRFSEFDPPK+DDEWGGDG     NG
Sbjct: 61  DASSGDEDAAGSR--PGITDEWGEEAESDPDSSFSRFSEFDPPKDDDEWGGDGYGDGGNG 120

Query: 121 KAPML----EEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPA 180
           KA ++    EE VDDKLF+LKRCLVDTVYGTE GFRAG+EERAEVLEIVNQLEAANP PA
Sbjct: 121 KAAVVEDKSEEFVDDKLFELKRCLVDTVYGTEIGFRAGLEERAEVLEIVNQLEAANPTPA 180

Query: 181 SVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF 240
            VEA ELLDGNWIL+YTAFSELLPLLALGTLPLVKVEKITQEIDSNTLT+VNSTTLSSPF
Sbjct: 181 PVEAPELLDGNWILVYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTVVNSTTLSSPF 240

Query: 241 TTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLN 300
           TTFSFSASAAFEVR+PSRIQVQFKEGILQPPEIKS LDLPENIDIFGQ++NLSPVQQTL+
Sbjct: 241 TTFSFSASAAFEVRTPSRIQVQFKEGILQPPEIKSRLDLPENIDIFGQKINLSPVQQTLD 300

Query: 301 PIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSAL 353
           PIQQ+IASLFQ ISGQPPLKIPIPG+RN SWLLITYLDEDLRISRGDGG FVLVKEGSAL
Sbjct: 301 PIQQAIASLFQAISGQPPLKIPIPGDRNRSWLLITYLDEDLRISRGDGGLFVLVKEGSAL 360

[Close]

BLAST of Sed0005477 vs. ExPASy TrEMBL
Match: A0A6J1CUI4 (plastoglobulin-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014893 PE=3 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 2.0e-155
Identity = 304/363 (83.75%), Postives = 319/363 (87.88%), Query Frame = 0


Query: 1   MASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSF----KQPEPLRFPSLRLSSSLSD 60
           MASLLSSSQ +VFFTANPK PL SPL     PSFLSF    K+  P RFPSLRLSSSLSD
Sbjct: 1   MASLLSSSQCSVFFTANPKLPLLSPL-----PSFLSFTPSHKESTPFRFPSLRLSSSLSD 60

Query: 61  AASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGD---GAANG 120
            ASTG +DA  A P  NISDEWGE +EPDPDSSF+RFSEFDPPK+DDEWGGD   G  NG
Sbjct: 61  DASTGTDDA--AGPRANISDEWGEEAEPDPDSSFTRFSEFDPPKDDDEWGGDGYSGEGNG 120

Query: 121 KAPMLE----EDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPA 180
           +A  +E    E VDDKL +LKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANP PA
Sbjct: 121 RASAVEDKSGESVDDKLLELKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPTPA 180

Query: 181 SVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF 240
            VEA ELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF
Sbjct: 181 PVEAPELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF 240

Query: 241 TTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLN 300
           TTFSFSASAAFEVR+PSRIQVQFKEGILQPPEIKS LDLPENIDIFGQRVNLSPVQQTL+
Sbjct: 241 TTFSFSASAAFEVRTPSRIQVQFKEGILQPPEIKSRLDLPENIDIFGQRVNLSPVQQTLD 300

Query: 301 PIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSAL 353
           PIQQ+IASLFQVISGQPPLKIPIPG+RN SWLL TYLD+DLRISRGDGG FVLVKEGS L
Sbjct: 301 PIQQAIASLFQVISGQPPLKIPIPGDRNRSWLLTTYLDQDLRISRGDGGLFVLVKEGSTL 356

[Close]

BLAST of Sed0005477 vs. ExPASy TrEMBL
Match: A0A6J1HK05 (plastoglobulin-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465219 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.4e-153
Identity = 298/363 (82.09%), Postives = 320/363 (88.15%), Query Frame = 0


Query: 1   MASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSFKQPE----PLRFPSLRLSSSLSD 60
           MASLLSSS+ +VFFTANPK PLFS LP+  +PSFLSF  P      LRFPSLRLSSSLSD
Sbjct: 1   MASLLSSSKSSVFFTANPKLPLFSSLPSVYVPSFLSFNLPRKDSGSLRFPSLRLSSSLSD 60

Query: 61  AASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGDGAA---NG 120
            AS+G+ DAA +     I+DEWGE +E DPDSSFSRFSEFDPPK+DDEWGGDG A   NG
Sbjct: 61  DASSGDEDAAGSR--SGITDEWGEEAESDPDSSFSRFSEFDPPKDDDEWGGDGYADGGNG 120

Query: 121 KAPML----EEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPA 180
           KA ++    EE VDDKLF+LKRCLVDTVYGTE GFRAG+EERAEVLEIVNQLEAANP PA
Sbjct: 121 KAAVVEDKSEEFVDDKLFELKRCLVDTVYGTEIGFRAGLEERAEVLEIVNQLEAANPTPA 180

Query: 181 SVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPF 240
            VEA  LLDGNWIL+YTAFSELLPLLALGTLPLVKVEKITQEIDSNTLT+VNSTTLSSPF
Sbjct: 181 PVEAPGLLDGNWILVYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTVVNSTTLSSPF 240

Query: 241 TTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLN 300
           TTFSFSASAAFEVR+PSRIQVQFKEGILQPPEIKS LDLPENIDIFGQ++NLS VQQTL+
Sbjct: 241 TTFSFSASAAFEVRTPSRIQVQFKEGILQPPEIKSRLDLPENIDIFGQKINLSTVQQTLD 300

Query: 301 PIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSAL 353
           PIQ +IASLFQVISGQPPLKIPIPG+RN SWLLITYLDEDLRISRGDGG FVLVKEGSAL
Sbjct: 301 PIQHAIASLFQVISGQPPLKIPIPGDRNRSWLLITYLDEDLRISRGDGGLFVLVKEGSAL 360

[Close]

BLAST of Sed0005477 vs. ExPASy TrEMBL
Match: A0A0A0L540 (PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008840 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 5.7e-147
Identity = 288/366 (78.69%), Postives = 314/366 (85.79%), Query Frame = 0


Query: 1   MASLL----SSSQRTVFFTANPKSPLFSPLPTTPIPSFLSF----KQPEPLRFPSLRLSS 60
           MASLL    SSS+ ++FFT NPK PLFS LPT   PSFLSF    K+   LRFPSLRL+S
Sbjct: 1   MASLLSSSSSSSRSSLFFTTNPKFPLFSSLPTISRPSFLSFNLSHKESGALRFPSLRLTS 60

Query: 61  SLSDAASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGDGAAN 120
           SLSD  ST + D  ++   P I+DEWGE +EP+PDS+ +R S+FDPPKEDDEWGGD   N
Sbjct: 61  SLSDDPSTTDEDDTTSR--PKITDEWGEETEPEPDSTLTRLSDFDPPKEDDEWGGD-EGN 120

Query: 121 GKAPMLEE------DVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANP 180
           GK  ++EE      D  DKL +LKRCLVDTVYGTEFGFRAG+EERAE+LEIVNQLEAANP
Sbjct: 121 GKPSVVEEKSEEYVDNRDKLLELKRCLVDTVYGTEFGFRAGLEERAEILEIVNQLEAANP 180

Query: 181 NPASVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLS 240
            PA VEAS LLDGNWIL+YTAFSELLPLLALG LPLVKVEKITQEIDSNTLTIVNSTTLS
Sbjct: 181 TPAPVEASGLLDGNWILVYTAFSELLPLLALGALPLVKVEKITQEIDSNTLTIVNSTTLS 240

Query: 241 SPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQ 300
           SPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKS LDLPENIDIFGQ+VNLSPVQQ
Sbjct: 241 SPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSRLDLPENIDIFGQKVNLSPVQQ 300

Query: 301 TLNPIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEG 353
           TL+P+QQ++ASLFQVISGQPPLKIPIPG+RN SWLLITYLDEDLRISRGDGG FVLVKEG
Sbjct: 301 TLDPVQQTVASLFQVISGQPPLKIPIPGDRNKSWLLITYLDEDLRISRGDGGLFVLVKEG 360

[Close]

BLAST of Sed0005477 vs. ExPASy TrEMBL
Match: A0A1S3BJK7 (plastoglobulin-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490756 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 4.8e-146
Identity = 282/361 (78.12%), Postives = 310/361 (85.87%), Query Frame = 0


Query: 2   ASLLSSSQRTVFFTANPKSPLFSPLPTTPIPSFLSF----KQPEPLRFPSLRLSSSLSDA 61
           +S  SSS+ ++FFT NPK PLFS +PT   PSF+SF    K+   LRFPSLRL+SSLSD 
Sbjct: 10  SSSFSSSRSSLFFTTNPKFPLFSSIPTISHPSFISFNLSHKESGALRFPSLRLTSSLSDD 69

Query: 62  ASTGENDAASAAPLPNISDEWGEVSEPDPDSSFSRFSEFDPPKEDDEWGGDGAANGKAPM 121
            ST + D  ++  LP I+DEWGE +EP+P+S+ +R S+FDPPKEDDEWGGD   NGK  +
Sbjct: 70  PSTTDEDDTTS--LPKITDEWGEETEPEPESTLTRLSDFDPPKEDDEWGGD-EGNGKPSV 129

Query: 122 LEE------DVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAANPNPASV 181
           +EE      D  DKL +LKRCLVDTVYGTEFGFRAG+EERAE+LEIVNQLEAANP PA V
Sbjct: 130 VEEKSEEYADDRDKLLELKRCLVDTVYGTEFGFRAGLEERAEILEIVNQLEAANPTPAPV 189

Query: 182 EASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTLSSPFTT 241
           EAS LLDGNWILLYTAFSELLPLLALG LPLVKVEKITQEIDS T TIVNSTTLSSPFTT
Sbjct: 190 EASGLLDGNWILLYTAFSELLPLLALGALPLVKVEKITQEIDSKTFTIVNSTTLSSPFTT 249

Query: 242 FSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQQTLNPI 301
           FSFSASAAFEVRSPSRIQVQFKEGILQPPEIKS LDLPENIDIFGQ+VNLSPVQQTLNP+
Sbjct: 250 FSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSRLDLPENIDIFGQKVNLSPVQQTLNPV 309

Query: 302 QQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGGFFVLVKEGSALLD 353
           QQ++ASLFQVISGQPPLKIPIPG+RN SWLLITYLDEDLRISRGDGG FVLVKEGSALLD
Sbjct: 310 QQTVASLFQVISGQPPLKIPIPGDRNRSWLLITYLDEDLRISRGDGGLFVLVKEGSALLD 367

[Close]

BLAST of Sed0005477 vs. TAIR 10
Match: AT2G35490.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 360.1 bits (923), Expect = 2.0e-99
Identity = 209/380 (55.00%), Postives = 261/380 (68.68%), Query Frame = 0


Query: 11  TVFFTANPKSPL----------FSPLPTTPIPSFLSFK---QPEPLRFPSLRLS------ 70
           T+F  A P S L          FSP  +  + S LSF    +P+PLRF  +R S      
Sbjct: 3   TLFTVARPSSLLYVSSINPSKTFSPSISLKLNS-LSFSFGYRPKPLRFSKIRSSLPSESE 62

Query: 71  --SSLSDAASTGE-----NDAASAAPLPN------ISDEWGEVSEPDPDSSFSRFSEFDP 130
             S L  +A T E      DA      P+      I+DEWGE S P+ + S +RF E DP
Sbjct: 63  SESDLDASAVTDEWGEKPGDANEPDSQPDNVTVNVITDEWGEKSGPELEESGTRFMESDP 122

Query: 131 PKEDDEWGGD-------GAANGKAPMLEEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEER 190
           P+ +DEWGG+        A NG A      V D  ++LKRCL D+VYGTE GF+AG E R
Sbjct: 123 PRNEDEWGGEIGGETEADAGNGSA------VSDPTWELKRCLADSVYGTELGFKAGSEVR 182

Query: 191 AEVLEIVNQLEAANPNPASVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQE 250
           AEVLE+VNQLEA NP PA +E  ELLDGNW+LLYTAFSEL+PLLA G+ PL+KV+ I+Q 
Sbjct: 183 AEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSISQS 242

Query: 251 IDSNTLTIVNSTTLSSPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPEN 310
           ID+N L I NSTTLSSPF  FSFSA+A+FEVRSPSRI+V FKEG L+PP IKSS+DLPE+
Sbjct: 243 IDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDLPES 302

Query: 311 IDIFGQRVNLSPVQQTLNPIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLR 352
           + +FGQ+++LS ++Q+LNP+Q   A++ + +SGQPPLK+P PGNR SSWLL TYLD+DLR
Sbjct: 303 VGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLTTYLDKDLR 362

[Close]

BLAST of Sed0005477 vs. TAIR 10
Match: AT4G04020.1 (fibrillin )

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-63
Identity = 120/258 (46.51%), Postives = 176/258 (68.22%), Query Frame = 0


Query: 102 DDEWGGDGAANGKAPMLEEDVDDKLFD-------LKRCLVDTVYGTEFGFRAGVEERAEV 161
           DDEWG DG     A      V DK  +       LKR L D++YGT+ G     + RAE+
Sbjct: 60  DDEWGQDGVERVFASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSVSSDTRAEI 119

Query: 162 LEIVNQLEAANPNPASVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDS 221
            E++ QLE+ NP PA  EA  LL+G WIL YT+F  L PLL+    PLVKV++I+Q IDS
Sbjct: 120 SELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVDEISQTIDS 179

Query: 222 NTLTIVNSTTLSSPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDI 281
           ++ T+ NS   + PF+T SFS +A FE+RSP R+Q++F++G++  P++  S+++PE++++
Sbjct: 180 DSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEV 239

Query: 282 FGQRVNLSPVQQTLNPIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISR 341
            GQ+++L+P++  L  +Q + +S+ + IS QPPLK  +P +   SWLL TYLD+DLRISR
Sbjct: 240 LGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISR 299

Query: 342 GDGG-FFVLVKEGSALLD 352
           GDGG  +VL+KEGS+LL+
Sbjct: 300 GDGGSVYVLIKEGSSLLN 317

[Close]

BLAST of Sed0005477 vs. TAIR 10
Match: AT4G22240.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-60
Identity = 116/247 (46.96%), Postives = 172/247 (69.64%), Query Frame = 0


Query: 106 GGDGAANGKAPMLEEDVDDKLFDLKRCLVDTVYGTEFGFRAGVEERAEVLEIVNQLEAAN 165
           G  G+A   A    EDV++    LKR LVD++YGT+ G  A  E RAE+ +++ QLE+ N
Sbjct: 64  GEIGSALLAAEEAIEDVEE-TERLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKN 123

Query: 166 PNPASVEASELLDGNWILLYTAFSELLPLLALGTLPLVKVEKITQEIDSNTLTIVNSTTL 225
           P PA  EA  LL+G WIL YT+F  L PLL+ G +PL+KV++I+Q IDS+  T+ NS   
Sbjct: 124 PTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQTIDSDNFTVQNSVRF 183

Query: 226 SSPFTTFSFSASAAFEVRSPSRIQVQFKEGILQPPEIKSSLDLPENIDIFGQRVNLSPVQ 285
           + P  T S S +A FE+RSP R+Q++F++G++  P++  S+++PE +++ GQ+++L+P++
Sbjct: 184 AGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIR 243

Query: 286 QTLNPIQQSIASLFQVISGQPPLKIPIPGNRNSSWLLITYLDEDLRISRGDGG-FFVLVK 345
             L  +Q + +S+ + IS QPPLK  +P +   SWLL TYLD+D+RISRGDGG  FVL+K
Sbjct: 244 GLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGGSVFVLIK 303

Query: 346 EGSALLD 352
           EGS LL+
Sbjct: 304 EGSPLLN 309

The following BLAST results are available for this feature:

BLAST of Sed0005477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923348.1	8.1e-156	82.64	plastoglobulin-1, chloroplastic [Cucurbita moschata] >KAG6577728.1 Plastid lipid...	[more]
XP_022145450.1	4.0e-155	83.75	plastoglobulin-1, chloroplastic [Momordica charantia]	[more]
XP_023552507.1	5.3e-155	82.64	plastoglobulin-1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023552508.1 pla...	[more]
KAG7015764.1	5.8e-154	81.82	Plastid lipid-associated protein 3, chloroplastic [Cucurbita argyrosperma subsp....	[more]
XP_038906135.1	1.3e-153	83.33	plastoglobulin-1, chloroplastic [Benincasa hispida]	[more]

BLAST of Sed0005477 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94KU5	1.7e-100	57.07	Plastid lipid-associated protein 3, chloroplastic OS=Brassica campestris OX=3711...	[more]
Q9ZP40	1.5e-99	56.60	Plastoglobulin-1, chloroplastic OS=Pisum sativum OX=3888 GN=PG1 PE=1 SV=1	[more]
O82291	2.8e-98	55.00	Probable plastid-lipid-associated protein 3, chloroplastic OS=Arabidopsis thalia...	[more]
Q7XBW5	5.8e-96	63.12	Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp...	[more]
O81439	1.9e-62	46.51	Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of Sed0005477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E9A3	3.9e-156	82.64	plastoglobulin-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431070 PE...	[more]
A0A6J1CUI4	2.0e-155	83.75	plastoglobulin-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014893 P...	[more]
A0A6J1HK05	2.4e-153	82.09	plastoglobulin-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465219 PE=3...	[more]
A0A0A0L540	5.7e-147	78.69	PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G0088...	[more]
A0A1S3BJK7	4.8e-146	78.12	plastoglobulin-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490756 PE=3 SV=...	[more]

BLAST of Sed0005477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35490.1	2.0e-99	55.00	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT4G04020.1	1.3e-63	46.51	fibrillin	[more]
AT4G22240.1	1.4e-60	46.96	Plastid-lipid associated protein PAP / fibrillin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006843	Plastid lipid-associated protein/fibrillin conserved domain	PFAM	PF04755	PAP_fibrillin	coord: 128..342 e-value: 5.9E-68 score: 228.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..108
None	No IPR available	PANTHER	PTHR31906:SF5	PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED	coord: 37..351
IPR039633	Plastid-lipid-associated protein	PANTHER	PTHR31906	FAMILY NOT NAMED	coord: 37..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005477.1	Sed0005477.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity