Homology
BLAST of Sed0005411 vs. NCBI nr
Match:
XP_038888390.1 (pentatricopeptide repeat-containing protein At1g06143 [Benincasa hispida])
HSP 1 Score: 1033.5 bits (2671), Expect = 7.3e-298
Identity = 508/594 (85.52%), Postives = 540/594 (90.91%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
MFS +NALKQ+TR+IS F SSIS P Q P++ +FKQTLL+RIKNCS++N LDGIYAS
Sbjct: 1 MFSFVITNALKQLTRSISNFVSSSISMPPQPPSIPSFKQTLLNRIKNCSTINELDGIYAS 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIKTNATQDCFLVNQFIS SL FN VDY V+ FTQMENPNVFVYNAMIRGFV CG+PF A
Sbjct: 61 MIKTNATQDCFLVNQFISTSLAFNSVDYPVIAFTQMENPNVFVYNAMIRGFVYCGYPFGA 120
Query: 121 LQCYVHLL-ESKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALID 180
LQCYVH+L E+K PTSYTFSSLVKACT MCAVELGRMIHCHIWK+GFES +FVQTALID
Sbjct: 121 LQCYVHMLEEAKVFPTSYTFSSLVKACTFMCAVELGRMIHCHIWKSGFESHLFVQTALID 180
Query: 181 FYSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTM 240
FYSNLERLSEARKVFDEMRERD+FAWTTMVS LARAGDMDSAR+LFEEMPE T TWNTM
Sbjct: 181 FYSNLERLSEARKVFDEMRERDSFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTM 240
Query: 241 IDGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDE 300
IDGYARLGNVESAEFLFNQMP RDIISWTTMI+CYSQNK+Y+EAL IY MR+NGIIPDE
Sbjct: 241 IDGYARLGNVESAEFLFNQMPVRDIISWTTMITCYSQNKQYQEALMIYIKMRLNGIIPDE 300
Query: 301 VALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFK 360
V LSTVVSACAHVGALELGK IHHYVMSQGLN DVYIGSALVDMYAKCGSLD SLLVFFK
Sbjct: 301 VTLSTVVSACAHVGALELGKTIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDRSLLVFFK 360
Query: 361 LKDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEG 420
L DKNLYCWNAVIEGLAVHG AEKALRMF IMEREKI PN VTFISILSACTHAGLVEEG
Sbjct: 361 LMDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIGPNGVTFISILSACTHAGLVEEG 420
Query: 421 RSRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCK 480
RSRFLS+TRDYGI PE+ HYGCMVDMLSKAG LDEAL+LI+SMEFEPNS++WGALLNGCK
Sbjct: 421 RSRFLSMTRDYGIRPEIGHYGCMVDMLSKAGFLDEALELIKSMEFEPNSIIWGALLNGCK 480
Query: 481 LHGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPG 540
LHGN EIAKDAV+QLM LEP + GHYNLLVSMYAEEK WMEVAHIRAM+KEQGVEKK PG
Sbjct: 481 LHGNSEIAKDAVQQLMILEPMSSGHYNLLVSMYAEEKDWMEVAHIRAMMKEQGVEKKYPG 540
Query: 541 SSWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPELSVCCNILV 594
SSWIEL+GRIHQFSASADSHPDS EIYF+LTELDGQLKLAGYI E VCCN LV
Sbjct: 541 SSWIELDGRIHQFSASADSHPDSDEIYFLLTELDGQLKLAGYILEPPVCCNALV 594
BLAST of Sed0005411 vs. NCBI nr
Match:
XP_022963550.1 (pentatricopeptide repeat-containing protein At1g06143 [Cucurbita moschata])
HSP 1 Score: 1028.1 bits (2657), Expect = 3.1e-296
Identity = 502/587 (85.52%), Postives = 533/587 (90.80%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
MFS+ +NALKQITR+IS F SS + LQ V TFKQTLLDRIKNCS++N LDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIKTNATQDCFLVNQFISASL FN VDY VL FTQMENPNVFVYNAMIRGFV CG+PFRA
Sbjct: 61 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 121 LQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDF 180
+QCYVH+LESK LP+SYTFSSLVKACTCMCA++LGRMIHCHIWKNG E DVFVQT+LID
Sbjct: 121 IQCYVHMLESKVLPSSYTFSSLVKACTCMCALDLGRMIHCHIWKNGLELDVFVQTSLIDL 180
Query: 181 YSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMI 240
YSNLER +ARKVFDEMRERDTFAWTTMVS LARAGDMDSAR+LFEEMPE T TWNTMI
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDEV 300
DGYARLGNVESAEFLFNQMPARDIISWTTMI+CYSQNK+Y EALTIY +MR+NGIIPDEV
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALTIYGNMRLNGIIPDEV 300
Query: 301 ALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKL 360
+STVVSACAHVGALELGKEIHHY MS+GLN DVYIGSALVDMYAKCGSLD SLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAMSRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 361 KDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGR 420
KDKNLYCWNAVIEGLAVHG AEKALRMF IMEREKIMPN VTFISILSACTHAGLV EGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 420
Query: 421 SRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKL 480
SRF S+ RDYGI PEVEHYGCMVDMLSKAGLLDEAL+LI MEFEPNS++WGALLNGCKL
Sbjct: 421 SRFSSMIRDYGIRPEVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKL 480
Query: 481 HGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGS 540
HGN EIAKDAV+QL LEPKN GHYNLLVSMYAEEKHWM+VAHIRAM+KE GVEKK PGS
Sbjct: 481 HGNSEIAKDAVQQLTVLEPKNSGHYNLLVSMYAEEKHWMKVAHIRAMMKENGVEKKYPGS 540
Query: 541 SWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPELSV 588
SWIELEGRIHQFSASA+ HPDS +IYFILTELDGQLKLAG + E SV
Sbjct: 541 SWIELEGRIHQFSASANCHPDSDKIYFILTELDGQLKLAGNVLEPSV 587
BLAST of Sed0005411 vs. NCBI nr
Match:
XP_023554768.1 (pentatricopeptide repeat-containing protein At1g06143 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1027.7 bits (2656), Expect = 4.0e-296
Identity = 502/587 (85.52%), Postives = 531/587 (90.46%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
MFS+ +NALKQITR+IS F SS + LQ V TFKQTLLDRIKNCS++N LDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIKTNATQDCFLVNQFISASL FN VDY VL FTQMENPNVFVYNAMIRGFV CG+PFRA
Sbjct: 61 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 121 LQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDF 180
+QCYVH+LES+ LP+SYTFSSLVKACTCMCA++LGRMIHCHIWKNG E DVFVQT+LID
Sbjct: 121 IQCYVHMLESQVLPSSYTFSSLVKACTCMCALDLGRMIHCHIWKNGLELDVFVQTSLIDL 180
Query: 181 YSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMI 240
YSNLER +ARKVFDEMRERDTFAWTTMVS LARAGDMD+AR+LFEEMPE T TWNTMI
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDTARKLFEEMPESNTATWNTMI 240
Query: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDEV 300
DGYARLGNVESAEFLFNQMPARDIISWTTMI+CYSQNK+Y EALTIY DMR+NGIIPDEV
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALTIYGDMRLNGIIPDEV 300
Query: 301 ALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKL 360
+STVVSACAHVGAL+LGKEIHHY MS GLN DVYIGSALVDMYAKCGSLD SLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 361 KDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGR 420
KDKNLYCWNAVIEGLAVHG AEKALRMF IMEREKIMPN VTFISILSACTHAGLV EGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 420
Query: 421 SRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKL 480
SRF S+ RDYGI PEVEHYGCMVDMLSKAGLLDEAL+LI MEFEPNS++WGALLNGCKL
Sbjct: 421 SRFSSMIRDYGIRPEVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKL 480
Query: 481 HGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGS 540
HGN EIAKDAV QL LEPKN GHYNLLVSMYAEEKHWMEVAHIRAM+KE GVEKK PGS
Sbjct: 481 HGNSEIAKDAVRQLTILEPKNSGHYNLLVSMYAEEKHWMEVAHIRAMMKENGVEKKYPGS 540
Query: 541 SWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPELSV 588
SWIELEGRIHQFSASAD HPDS +IYFILTELDGQLKLAG + E SV
Sbjct: 541 SWIELEGRIHQFSASADCHPDSDKIYFILTELDGQLKLAGNVLEPSV 587
BLAST of Sed0005411 vs. NCBI nr
Match:
XP_022967388.1 (pentatricopeptide repeat-containing protein At1g06143 [Cucurbita maxima])
HSP 1 Score: 1026.2 bits (2652), Expect = 1.2e-295
Identity = 501/587 (85.35%), Postives = 532/587 (90.63%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
MFS+ +NALKQITR+IS F SS S+ LQ P V TFKQTLLDRIKNCS++N LDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTSRTLQGPYVPTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIK NATQDCFLVNQFISASL FN VDY VL FTQMENPNVFVYNAMIRGFV CG+PFRA
Sbjct: 61 MIKANATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 121 LQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDF 180
+QCYVH+LES+ LP+SYTFSSLVKACTCMCA++LGRMIHC IW +G E DVFVQT+LID
Sbjct: 121 IQCYVHMLESQVLPSSYTFSSLVKACTCMCALDLGRMIHCQIWTHGLELDVFVQTSLIDL 180
Query: 181 YSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMI 240
YSNLER +ARKVFDEMRERDTFAWTTMVS LARAGDMDSAR+LFEEMPE T TWNTMI
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDEV 300
DGYARLGNVESAEFLFNQMPARDIISWTTMI+CYSQNK+Y EAL IY DMR+NGIIPDEV
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALMIYGDMRLNGIIPDEV 300
Query: 301 ALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKL 360
+STVVSACAHVGALELGKEIHHY MS+GLN DVYIGSALVDMYAKCGSLD SLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAMSRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 361 KDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGR 420
KDKNLYCWNAVIEGLAVHG AEKALRMF IMEREKIMPN VTFISILSACTHAGLV EGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVVEGR 420
Query: 421 SRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKL 480
SRFLS+ RDYGIHPEVEHYGCMVDMLSKAGLLDEAL+LI MEFEPNS++WGALLNGCKL
Sbjct: 421 SRFLSMIRDYGIHPEVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKL 480
Query: 481 HGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGS 540
HGN EIAKDAV +L LEPKN GHYNLLVSMYAEEKHW+EVAHIRAM+KE GVEKK PGS
Sbjct: 481 HGNSEIAKDAVRRLNILEPKNSGHYNLLVSMYAEEKHWIEVAHIRAMMKENGVEKKYPGS 540
Query: 541 SWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPELSV 588
SWIELEGRIHQFSASAD HPDS +IYFILTELDGQLKLAG + E SV
Sbjct: 541 SWIELEGRIHQFSASADCHPDSDKIYFILTELDGQLKLAGNVLEPSV 587
BLAST of Sed0005411 vs. NCBI nr
Match:
KAG6571513.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1025.4 bits (2650), Expect = 2.0e-295
Identity = 501/587 (85.35%), Postives = 532/587 (90.63%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
MFS+ +NALKQITR+IS F SS + LQ V TFKQTLLDRIKNCS++N LDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIKTNATQDCFLVNQFISASL FN VDY VL F QMENPNVFVYNAMIRGFV CG+PFRA
Sbjct: 61 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFIQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 121 LQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDF 180
+QCYVH+LESK LP+SYTFSSLVKACTCMCA++LGRMIHCHIWKNG E DVFVQT+LID
Sbjct: 121 IQCYVHMLESKVLPSSYTFSSLVKACTCMCALDLGRMIHCHIWKNGLELDVFVQTSLIDL 180
Query: 181 YSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMI 240
YSNLER +ARKVFDEMRERDTFAWTTMVS LARAGDMDSAR+LFEEMPE T TWNTMI
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDEV 300
DGYARLGNVESAEFLFNQMPARDIISWTTMI+CYSQNK+Y EALTIY +MR+NGIIPDEV
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALTIYGNMRLNGIIPDEV 300
Query: 301 ALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKL 360
+STVVSACAHVGALELGKEIHHY MS+GLN DVYIGSALVDMYAKCGSLD SLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAMSRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 361 KDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGR 420
KDKNLYCWNAVIEGLAVHG AEKALRMF IMEREKIMPN VTFISILSACTHAGLV EGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 420
Query: 421 SRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKL 480
SRF S+ RDYGI PEVEHYGCMVDMLSKAGLLDEAL+LI MEFEPNS++WGALLNGCKL
Sbjct: 421 SRFSSMIRDYGIRPEVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKL 480
Query: 481 HGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGS 540
HGN EIAKDAV+QL LEPKN GHYNLLVSMYAEEKHWM+VAHIRAM+KE GVEKK PGS
Sbjct: 481 HGNSEIAKDAVQQLTILEPKNSGHYNLLVSMYAEEKHWMKVAHIRAMMKENGVEKKYPGS 540
Query: 541 SWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPELSV 588
SWIELEGRIHQFSASA+ HPDS +IYFILTELDGQLKLAG + E SV
Sbjct: 541 SWIELEGRIHQFSASANCHPDSDKIYFILTELDGQLKLAGNVLEPSV 587
BLAST of Sed0005411 vs. ExPASy Swiss-Prot
Match:
Q56X05 (Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=2)
HSP 1 Score: 626.7 bits (1615), Expect = 2.7e-178
Identity = 317/584 (54.28%), Postives = 401/584 (68.66%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
M + AN ++L+ + + F S S L PN+ IK CS+ L+ A+
Sbjct: 1 MNAFANVHSLRVPSHHLRDF---SASLSLAPPNLKKI-------IKQCSTPKLLESALAA 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIKT+ QDC L+NQFI+A F +D V TQM+ PNVFVYNA+ +GFV C HP R+
Sbjct: 61 MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRS 120
Query: 121 LQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDF 180
L+ YV +L P+SYT+SSLVKA + A G + HIWK GF V +QT LIDF
Sbjct: 121 LELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDF 180
Query: 181 YSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMI 240
YS R+ EARKVFDEM ERD AWTTMVS R DMDSA L +M E+ T N +I
Sbjct: 181 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 240
Query: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDEV 300
+GY LGN+E AE LFNQMP +DIISWTTMI YSQNKRYREA+ ++ M GIIPDEV
Sbjct: 241 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 300
Query: 301 ALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKL 360
+STV+SACAH+G LE+GKE+H Y + G DVYIGSALVDMY+KCGSL+ +LLVFF L
Sbjct: 301 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 360
Query: 361 KDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGR 420
KNL+CWN++IEGLA HG A++AL+MF ME E + PN VTF+S+ +ACTHAGLV+EGR
Sbjct: 361 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 420
Query: 421 SRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKL 480
+ S+ DY I VEHYG MV + SKAGL+ EAL+LI +MEFEPN+V+WGALL+GC++
Sbjct: 421 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 480
Query: 481 HGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGS 540
H N IA+ A +LM LEP N G+Y LLVSMYAE+ W +VA IR ++E G+EK PG+
Sbjct: 481 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 540
Query: 541 SWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPE 585
S I ++ R H F+A+ SH S E+ +L E+ Q+ LAGY+ E
Sbjct: 541 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQE 572
BLAST of Sed0005411 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 415.6 bits (1067), Expect = 9.4e-115
Identity = 212/585 (36.24%), Postives = 351/585 (60.00%), Query Frame = 0
Query: 26 SKPLQRPNVHTFKQTLLDRIKN---CSSVNYLDGIYASMIKTNATQDCFLVNQFISASLG 85
S P++ P+ + ++ +R+++ C+++N + ++A +I+ N +D + + ISA
Sbjct: 4 SLPVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSL 63
Query: 86 FNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRALQCYVHLLESKALPTSYTFSSL 145
+ V VF Q++ PNV + N++IR + P++A + + ++T+ L
Sbjct: 64 CRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFL 123
Query: 146 VKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDFYSNLERLS--EARKVFDEMRER 205
+KAC+ + + +M+H HI K G SD++V ALID YS L +A K+F++M ER
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 206 DTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMIDGYAR--------------- 265
DT +W +M+ L +AG++ ARRLF+EMP+R ++WNTM+DGYAR
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 266 ----------------LGNVESAEFLFNQM--PARDIISWTTMISCYSQNKRYREALTIY 325
G++E A +F++M PA+++++WT +I+ Y++ +EA +
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 326 DDMRVNGIIPDEVALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKC 385
D M +G+ D A+ ++++AC G L LG IH + L + Y+ +AL+DMYAKC
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKC 363
Query: 386 GSLDWSLLVFFKLKDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISIL 445
G+L + VF + K+L WN ++ GL VHG ++A+ +F M RE I P++VTFI++L
Sbjct: 364 GNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVL 423
Query: 446 SACTHAGLVEEGRSRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPN 505
+C HAGL++EG F S+ + Y + P+VEHYGC+VD+L + G L EA+ ++++M EPN
Sbjct: 424 CSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPN 483
Query: 506 SVVWGALLNGCKLHGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAM 565
V+WGALL C++H +IAK+ ++ L+ L+P + G+Y+LL ++YA + W VA IR+
Sbjct: 484 VVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSK 543
Query: 566 LKEQGVEKKNPGSSWIELEGRIHQFSASADSHPDSGEIYFILTEL 573
+K GVEK + G+S +ELE IH+F+ SHP S +IY +L L
Sbjct: 544 MKSMGVEKPS-GASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
BLAST of Sed0005411 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 405.2 bits (1040), Expect = 1.3e-111
Identity = 216/649 (33.28%), Postives = 352/649 (54.24%), Query Frame = 0
Query: 13 ITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYASMIKTNATQDCFL 72
+T S++P + P L + NC ++ L I+A MIK +
Sbjct: 8 LTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYA 67
Query: 73 VN---QFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRALQCYVHLLE 132
++ +F S F + Y + VF ++ PN+ ++N M RG P AL+ YV ++
Sbjct: 68 LSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 133 SKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDFYSNLERLSE 192
LP SYTF ++K+C A + G+ IH H+ K G + D++V T+LI Y RL +
Sbjct: 128 LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLED 187
Query: 193 ARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMIDGYARLGN- 252
A KVFD+ RD ++T ++ A G +++A++LF+E+P + V+WN MI GYA GN
Sbjct: 188 AHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNY 247
Query: 253 ------------------------------------------------------------ 312
Sbjct: 248 KEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL 307
Query: 313 ---------VESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDE 372
+E+A LF ++P +D+ISW T+I Y+ Y+EAL ++ +M +G P++
Sbjct: 308 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 367
Query: 373 VALSTVVSACAHVGALELGKEIHHYV--MSQGLNFDVYIGSALVDMYAKCGSLDWSLLVF 432
V + +++ ACAH+GA+++G+ IH Y+ +G+ + ++L+DMYAKCG ++ + VF
Sbjct: 368 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 427
Query: 433 FKLKDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVE 492
+ K+L WNA+I G A+HG A+ + +F M + I P+ +TF+ +LSAC+H+G+++
Sbjct: 428 NSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLD 487
Query: 493 EGRSRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNG 552
GR F ++T+DY + P++EHYGCM+D+L +GL EA ++I ME EP+ V+W +LL
Sbjct: 488 LGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKA 547
Query: 553 CKLHGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKN 587
CK+HGN E+ + E L+ +EP+N G Y LL ++YA W EVA RA+L ++G+ KK
Sbjct: 548 CKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGM-KKV 607
BLAST of Sed0005411 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 401.7 bits (1031), Expect = 1.4e-110
Identity = 214/556 (38.49%), Postives = 320/556 (57.55%), Query Frame = 0
Query: 45 IKNCSSVNYLDGIYASMIKTNATQDCFLVNQFIS---ASLGFNCVDYQVLVFTQMENPNV 104
++ CS L I+A M+KT QD + + +F+S +S + + Y +VF + P+
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 105 FVYNAMIRGFVRCGHPFRALQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCH 164
F++N MIRGF P R+L Y +L S A +YTF SL+KAC+ + A E IH
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 165 IWKNGFESDVFVQTALIDFYSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSA 224
I K G+E+DV+ +LI+ Y A G+ A
Sbjct: 141 ITKLGYENDVYAVNSLINSY-------------------------------AVTGNFKLA 200
Query: 225 RRLFEEMPERYTVTWNTMIDGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYR 284
LF+ +PE V+WN++I GY + G ++ A LF +M ++ ISWTTMIS Y Q +
Sbjct: 201 HLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNK 260
Query: 285 EALTIYDDMRVNGIIPDEVALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALV 344
EAL ++ +M+ + + PD V+L+ +SACA +GALE GK IH Y+ + D +G L+
Sbjct: 261 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 320
Query: 345 DMYAKCGSLDWSLLVFFKLKDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRV 404
DMYAKCG ++ +L VF +K K++ W A+I G A HG +A+ F M++ I PN +
Sbjct: 321 DMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 380
Query: 405 TFISILSACTHAGLVEEGRSRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRS 464
TF ++L+AC++ GLVEEG+ F S+ RDY + P +EHYGC+VD+L +AGLLDEA I+
Sbjct: 381 TFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQE 440
Query: 465 MEFEPNSVVWGALLNGCKLHGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEV 524
M +PN+V+WGALL C++H N E+ ++ E L+ ++P + G Y +++A +K W +
Sbjct: 441 MPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKA 500
Query: 525 AHIRAMLKEQGVEKKNPGSSWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGY 584
A R ++KEQGV K PG S I LEG H+F A SHP+ +I + +L+ GY
Sbjct: 501 AETRRLMKEQGVAKV-PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGY 544
Query: 585 IPELSVCCNILVYTEE 598
+PEL LV +E
Sbjct: 561 VPELEEMLLDLVDDDE 544
BLAST of Sed0005411 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 388.3 bits (996), Expect = 1.6e-106
Identity = 213/643 (33.13%), Postives = 347/643 (53.97%), Query Frame = 0
Query: 24 SISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYASMIKTNATQDCFLVNQF--ISASL 83
+ S P Q P + + + I+ C S+ L + MI+T D + ++ ++A
Sbjct: 17 NFSNPNQ-PTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALS 76
Query: 84 GFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRALQCYVHLL-ESKALPTSYTFS 143
F ++Y VF ++ PN F +N +IR + P ++ ++ ++ ES+ P YTF
Sbjct: 77 SFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFP 136
Query: 144 SLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDFYSNLERLSEARKVFDEMRER 203
L+KA + ++ LG+ +H K+ SDVFV +LI Y + L A KVF ++E+
Sbjct: 137 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 196
Query: 204 DTFAW--------------------------------TTMVSVLA--------------- 263
D +W TMV VL+
Sbjct: 197 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 256
Query: 264 -----------------------RAGDMDSARRLFEEMPERYTVTWNTMIDGYARLGNVE 323
+ G ++ A+RLF+ M E+ VTW TM+DGYA + E
Sbjct: 257 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 316
Query: 324 SAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRV-NGIIPDEVALSTVVSAC 383
+A + N MP +DI++W +IS Y QN + EAL ++ ++++ + +++ L + +SAC
Sbjct: 317 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 376
Query: 384 AHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKLKDKNLYCWN 443
A VGALELG+ IH Y+ G+ + ++ SAL+ MY+KCG L+ S VF ++ ++++ W+
Sbjct: 377 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 436
Query: 444 AVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGRSRFLSITRD 503
A+I GLA+HGC +A+ MF M+ + PN VTF ++ AC+H GLV+E S F + +
Sbjct: 437 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 496
Query: 504 YGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKLHGNWEIAKD 563
YGI PE +HY C+VD+L ++G L++A+ I +M P++ VWGALL CK+H N +A+
Sbjct: 497 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 556
Query: 564 AVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGSSWIELEGRI 593
A +L+ LEP+N G + LL ++YA+ W V+ +R ++ G+ KK PG S IE++G I
Sbjct: 557 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL-KKEPGCSSIEIDGMI 616
BLAST of Sed0005411 vs. ExPASy TrEMBL
Match:
A0A6J1HIB3 (pentatricopeptide repeat-containing protein At1g06143 OS=Cucurbita moschata OX=3662 GN=LOC111463844 PE=4 SV=1)
HSP 1 Score: 1028.1 bits (2657), Expect = 1.5e-296
Identity = 502/587 (85.52%), Postives = 533/587 (90.80%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
MFS+ +NALKQITR+IS F SS + LQ V TFKQTLLDRIKNCS++N LDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIKTNATQDCFLVNQFISASL FN VDY VL FTQMENPNVFVYNAMIRGFV CG+PFRA
Sbjct: 61 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 121 LQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDF 180
+QCYVH+LESK LP+SYTFSSLVKACTCMCA++LGRMIHCHIWKNG E DVFVQT+LID
Sbjct: 121 IQCYVHMLESKVLPSSYTFSSLVKACTCMCALDLGRMIHCHIWKNGLELDVFVQTSLIDL 180
Query: 181 YSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMI 240
YSNLER +ARKVFDEMRERDTFAWTTMVS LARAGDMDSAR+LFEEMPE T TWNTMI
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDEV 300
DGYARLGNVESAEFLFNQMPARDIISWTTMI+CYSQNK+Y EALTIY +MR+NGIIPDEV
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALTIYGNMRLNGIIPDEV 300
Query: 301 ALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKL 360
+STVVSACAHVGALELGKEIHHY MS+GLN DVYIGSALVDMYAKCGSLD SLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAMSRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 361 KDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGR 420
KDKNLYCWNAVIEGLAVHG AEKALRMF IMEREKIMPN VTFISILSACTHAGLV EGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 420
Query: 421 SRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKL 480
SRF S+ RDYGI PEVEHYGCMVDMLSKAGLLDEAL+LI MEFEPNS++WGALLNGCKL
Sbjct: 421 SRFSSMIRDYGIRPEVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKL 480
Query: 481 HGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGS 540
HGN EIAKDAV+QL LEPKN GHYNLLVSMYAEEKHWM+VAHIRAM+KE GVEKK PGS
Sbjct: 481 HGNSEIAKDAVQQLTVLEPKNSGHYNLLVSMYAEEKHWMKVAHIRAMMKENGVEKKYPGS 540
Query: 541 SWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPELSV 588
SWIELEGRIHQFSASA+ HPDS +IYFILTELDGQLKLAG + E SV
Sbjct: 541 SWIELEGRIHQFSASANCHPDSDKIYFILTELDGQLKLAGNVLEPSV 587
BLAST of Sed0005411 vs. ExPASy TrEMBL
Match:
A0A6J1HUY6 (pentatricopeptide repeat-containing protein At1g06143 OS=Cucurbita maxima OX=3661 GN=LOC111466933 PE=4 SV=1)
HSP 1 Score: 1026.2 bits (2652), Expect = 5.6e-296
Identity = 501/587 (85.35%), Postives = 532/587 (90.63%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
MFS+ +NALKQITR+IS F SS S+ LQ P V TFKQTLLDRIKNCS++N LDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTSRTLQGPYVPTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIK NATQDCFLVNQFISASL FN VDY VL FTQMENPNVFVYNAMIRGFV CG+PFRA
Sbjct: 61 MIKANATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 121 LQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDF 180
+QCYVH+LES+ LP+SYTFSSLVKACTCMCA++LGRMIHC IW +G E DVFVQT+LID
Sbjct: 121 IQCYVHMLESQVLPSSYTFSSLVKACTCMCALDLGRMIHCQIWTHGLELDVFVQTSLIDL 180
Query: 181 YSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMI 240
YSNLER +ARKVFDEMRERDTFAWTTMVS LARAGDMDSAR+LFEEMPE T TWNTMI
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDEV 300
DGYARLGNVESAEFLFNQMPARDIISWTTMI+CYSQNK+Y EAL IY DMR+NGIIPDEV
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALMIYGDMRLNGIIPDEV 300
Query: 301 ALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKL 360
+STVVSACAHVGALELGKEIHHY MS+GLN DVYIGSALVDMYAKCGSLD SLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAMSRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 361 KDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGR 420
KDKNLYCWNAVIEGLAVHG AEKALRMF IMEREKIMPN VTFISILSACTHAGLV EGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVVEGR 420
Query: 421 SRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKL 480
SRFLS+ RDYGIHPEVEHYGCMVDMLSKAGLLDEAL+LI MEFEPNS++WGALLNGCKL
Sbjct: 421 SRFLSMIRDYGIHPEVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKL 480
Query: 481 HGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGS 540
HGN EIAKDAV +L LEPKN GHYNLLVSMYAEEKHW+EVAHIRAM+KE GVEKK PGS
Sbjct: 481 HGNSEIAKDAVRRLNILEPKNSGHYNLLVSMYAEEKHWIEVAHIRAMMKENGVEKKYPGS 540
Query: 541 SWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPELSV 588
SWIELEGRIHQFSASAD HPDS +IYFILTELDGQLKLAG + E SV
Sbjct: 541 SWIELEGRIHQFSASADCHPDSDKIYFILTELDGQLKLAGNVLEPSV 587
BLAST of Sed0005411 vs. ExPASy TrEMBL
Match:
A0A6J1BWV2 (pentatricopeptide repeat-containing protein At1g06143 OS=Momordica charantia OX=3673 GN=LOC111006392 PE=4 SV=1)
HSP 1 Score: 997.7 bits (2578), Expect = 2.1e-287
Identity = 486/598 (81.27%), Postives = 530/598 (88.63%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
M S NALKQITR IS S IS+PLQ+P V TFK+TLLDRIKNC +++ LDG+YAS
Sbjct: 1 MLSAVTINALKQITRGISNSVHSPISRPLQQPEVPTFKRTLLDRIKNCFTISELDGVYAS 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIKTNA QDCFLVNQFISASL F+ VDY VL FTQM+NPNVFVYNAMIRGFV CGH +A
Sbjct: 61 MIKTNAIQDCFLVNQFISASLTFDRVDYPVLAFTQMDNPNVFVYNAMIRGFVHCGHSIQA 120
Query: 121 LQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDF 180
LQCYVH+LESK PTSYTFSSLVKACT +CAVELGR+IH HIWKNG ES VFVQTALIDF
Sbjct: 121 LQCYVHMLESKVFPTSYTFSSLVKACTSLCAVELGRIIHGHIWKNGLESHVFVQTALIDF 180
Query: 181 YSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMI 240
YSNL +L E+RKVFDEM ERD FAWTTM S L RAGDMDSAR+LFEEMPER T TWNTMI
Sbjct: 181 YSNLGKLCESRKVFDEMCERDAFAWTTMASALVRAGDMDSARKLFEEMPERNTATWNTMI 240
Query: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDEV 300
DGYARLGNVESAEFLFNQMPARDIISWTTMI+CYSQNK+Y EAL IY DMR+NGI PDEV
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYHEALAIYFDMRLNGISPDEV 300
Query: 301 ALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKL 360
++ V+S+CAHVGALELGK+IHHYVMSQGLNFDVYIGSALVDMYAKCGSLD SLLVFFKL
Sbjct: 301 TMAAVISSCAHVGALELGKKIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 361 KDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGR 420
K KNLYCWNAVIEGLAVHG AEKAL MF MEREKI+PN ++FIS+LSACTHAGLVEEGR
Sbjct: 361 KYKNLYCWNAVIEGLAVHGYAEKALMMFVAMEREKIVPNGISFISLLSACTHAGLVEEGR 420
Query: 421 SRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKL 480
RFLS+T DYGI PEVEHYGCMV+MLSKAGLLDEAL+LIRSM+F PNS++WGALLNGCKL
Sbjct: 421 RRFLSMTCDYGIRPEVEHYGCMVNMLSKAGLLDEALELIRSMKFAPNSIIWGALLNGCKL 480
Query: 481 HGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGS 540
HGN EIAKDAV+QL+ LEPKN GH+NLLVSMYAEEKHWMEVA+IRAM+KEQGVEKK PGS
Sbjct: 481 HGNLEIAKDAVQQLLILEPKNSGHFNLLVSMYAEEKHWMEVAYIRAMMKEQGVEKKYPGS 540
Query: 541 SWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPELSVCCNILVYTEEI 599
SWIEL+GRIH FSASA+SHPDS +IYFIL ELD QLKL G IPE S+C N LV+TEEI
Sbjct: 541 SWIELDGRIHPFSASAESHPDSDKIYFILAELDAQLKLFGCIPEHSICSNTLVHTEEI 598
BLAST of Sed0005411 vs. ExPASy TrEMBL
Match:
A0A5A7T9J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00860 PE=4 SV=1)
HSP 1 Score: 993.4 bits (2567), Expect = 4.0e-286
Identity = 485/599 (80.97%), Postives = 527/599 (87.98%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
MFS + ALKQ+TR+I F SIS PLQ P+ +FKQTLL+RIKNCS++N L +YAS
Sbjct: 1 MFSFVTTIALKQLTRSIGNFVSPSISMPLQSPSRPSFKQTLLNRIKNCSNINELHVVYAS 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIK+NA QDCFLV+QFISAS FN V Y V FTQMENPNVFVYNAMI+GFV G+PFR
Sbjct: 61 MIKSNAIQDCFLVHQFISASFAFNSVHYPVFAFTQMENPNVFVYNAMIKGFVYRGYPFRG 120
Query: 121 LQCYVHLLE-SKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALID 180
LQCYVH+LE S LP SYTFSSLVKACT MCAVELG+M+HCHIWK GFES +FVQTAL+D
Sbjct: 121 LQCYVHMLEGSNVLPNSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVD 180
Query: 181 FYSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTM 240
FYS LE+LSEARKVFDEM ERD FAWTTMVS LAR GDMD+AR+LFEEMPER T TWNTM
Sbjct: 181 FYSKLEKLSEARKVFDEMCERDAFAWTTMVSALARVGDMDTARKLFEEMPERNTATWNTM 240
Query: 241 IDGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDE 300
IDGYARLGNVESAE LFNQMP +DIISWTTMI+CYSQNK+Y++AL IY + R+NGIIPD+
Sbjct: 241 IDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSETRLNGIIPDQ 300
Query: 301 VALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFK 360
V +STVVSACAHVGALELGKEIH YVMSQGLN DVYIGSALVDMYAKCGSLDWSLL+FFK
Sbjct: 301 VTMSTVVSACAHVGALELGKEIHQYVMSQGLNHDVYIGSALVDMYAKCGSLDWSLLIFFK 360
Query: 361 LKDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEG 420
LKDKNLYCWNAVIEGLAVHG AEKALRMF IMEREKI+PN VTFISILSACTHAGLVEEG
Sbjct: 361 LKDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKILPNGVTFISILSACTHAGLVEEG 420
Query: 421 RSRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCK 480
RSRFLS+TRDYGI PE+ HYGCMVDMLSKAGLL EAL+LI+SMEFEPNS++WGALLNGCK
Sbjct: 421 RSRFLSMTRDYGISPEIRHYGCMVDMLSKAGLLKEALELIKSMEFEPNSIIWGALLNGCK 480
Query: 481 LHGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPG 540
LHGN IAKDAVEQLM LEP N GHYNLLVSM AEEK WMEVAHIR M+KEQGVEKK PG
Sbjct: 481 LHGNSVIAKDAVEQLMILEPMNSGHYNLLVSMCAEEKDWMEVAHIRLMMKEQGVEKKYPG 540
Query: 541 SSWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPELSVCCNILVYTEEI 599
SSWIELEG IHQFSASADSHPDS +IYF+LTELDGQLKLAGYI E SVC LV+ EEI
Sbjct: 541 SSWIELEGTIHQFSASADSHPDSDKIYFVLTELDGQLKLAGYILEPSVCSTALVFPEEI 599
BLAST of Sed0005411 vs. ExPASy TrEMBL
Match:
A0A1S3BHH1 (pentatricopeptide repeat-containing protein At1g06145-like OS=Cucumis melo OX=3656 GN=LOC103489889 PE=4 SV=1)
HSP 1 Score: 993.4 bits (2567), Expect = 4.0e-286
Identity = 485/599 (80.97%), Postives = 527/599 (87.98%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
MFS + ALKQ+TR+I F SIS PLQ P+ +FKQTLL+RIKNCS++N L +YAS
Sbjct: 1 MFSFVTTIALKQLTRSIGNFVSPSISMPLQSPSRPSFKQTLLNRIKNCSNINELHVVYAS 60
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIK+NA QDCFLV+QFISAS FN V Y V FTQMENPNVFVYNAMI+GFV G+PFR
Sbjct: 61 MIKSNAIQDCFLVHQFISASFAFNSVHYPVFAFTQMENPNVFVYNAMIKGFVYRGYPFRG 120
Query: 121 LQCYVHLLE-SKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALID 180
LQCYVH+LE S LP SYTFSSLVKACT MCAVELG+M+HCHIWK GFES +FVQTAL+D
Sbjct: 121 LQCYVHMLEGSNVLPNSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVD 180
Query: 181 FYSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTM 240
FYS LE+LSEARKVFDEM ERD FAWTTMVS LAR GDMD+AR+LFEEMPER T TWNTM
Sbjct: 181 FYSKLEKLSEARKVFDEMCERDAFAWTTMVSALARVGDMDTARKLFEEMPERNTATWNTM 240
Query: 241 IDGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDE 300
IDGYARLGNVESAE LFNQMP +DIISWTTMI+CYSQNK+Y++AL IY + R+NGIIPD+
Sbjct: 241 IDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSETRLNGIIPDQ 300
Query: 301 VALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFK 360
V +STVVSACAHVGALELGKEIH YVMSQGLN DVYIGSALVDMYAKCGSLDWSLL+FFK
Sbjct: 301 VTMSTVVSACAHVGALELGKEIHQYVMSQGLNHDVYIGSALVDMYAKCGSLDWSLLIFFK 360
Query: 361 LKDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEG 420
LKDKNLYCWNAVIEGLAVHG AEKALRMF IMEREKI+PN VTFISILSACTHAGLVEEG
Sbjct: 361 LKDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKILPNGVTFISILSACTHAGLVEEG 420
Query: 421 RSRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCK 480
RSRFLS+TRDYGI PE+ HYGCMVDMLSKAGLL EAL+LI+SMEFEPNS++WGALLNGCK
Sbjct: 421 RSRFLSMTRDYGISPEIRHYGCMVDMLSKAGLLKEALELIKSMEFEPNSIIWGALLNGCK 480
Query: 481 LHGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPG 540
LHGN IAKDAVEQLM LEP N GHYNLLVSM AEEK WMEVAHIR M+KEQGVEKK PG
Sbjct: 481 LHGNSVIAKDAVEQLMILEPMNSGHYNLLVSMCAEEKDWMEVAHIRLMMKEQGVEKKYPG 540
Query: 541 SSWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPELSVCCNILVYTEEI 599
SSWIELEG IHQFSASADSHPDS +IYF+LTELDGQLKLAGYI E SVC LV+ EEI
Sbjct: 541 SSWIELEGTIHQFSASADSHPDSDKIYFVLTELDGQLKLAGYILEPSVCSTALVFPEEI 599
BLAST of Sed0005411 vs. TAIR 10
Match:
AT1G06150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )
HSP 1 Score: 626.7 bits (1615), Expect = 1.9e-179
Identity = 317/584 (54.28%), Postives = 401/584 (68.66%), Query Frame = 0
Query: 1 MFSVANSNALKQITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYAS 60
M + AN ++L+ + + F S S L PN+ IK CS+ L+ A+
Sbjct: 746 MNAFANVHSLRVPSHHLRDF---SASLSLAPPNLKKI-------IKQCSTPKLLESALAA 805
Query: 61 MIKTNATQDCFLVNQFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRA 120
MIKT+ QDC L+NQFI+A F +D V TQM+ PNVFVYNA+ +GFV C HP R+
Sbjct: 806 MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRS 865
Query: 121 LQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDF 180
L+ YV +L P+SYT+SSLVKA + A G + HIWK GF V +QT LIDF
Sbjct: 866 LELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDF 925
Query: 181 YSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMI 240
YS R+ EARKVFDEM ERD AWTTMVS R DMDSA L +M E+ T N +I
Sbjct: 926 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 985
Query: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDEV 300
+GY LGN+E AE LFNQMP +DIISWTTMI YSQNKRYREA+ ++ M GIIPDEV
Sbjct: 986 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 1045
Query: 301 ALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKL 360
+STV+SACAH+G LE+GKE+H Y + G DVYIGSALVDMY+KCGSL+ +LLVFF L
Sbjct: 1046 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 1105
Query: 361 KDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGR 420
KNL+CWN++IEGLA HG A++AL+MF ME E + PN VTF+S+ +ACTHAGLV+EGR
Sbjct: 1106 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 1165
Query: 421 SRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKL 480
+ S+ DY I VEHYG MV + SKAGL+ EAL+LI +MEFEPN+V+WGALL+GC++
Sbjct: 1166 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 1225
Query: 481 HGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGS 540
H N IA+ A +LM LEP N G+Y LLVSMYAE+ W +VA IR ++E G+EK PG+
Sbjct: 1226 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 1285
Query: 541 SWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGYIPE 585
S I ++ R H F+A+ SH S E+ +L E+ Q+ LAGY+ E
Sbjct: 1286 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQE 1317
BLAST of Sed0005411 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 415.6 bits (1067), Expect = 6.7e-116
Identity = 212/585 (36.24%), Postives = 351/585 (60.00%), Query Frame = 0
Query: 26 SKPLQRPNVHTFKQTLLDRIKN---CSSVNYLDGIYASMIKTNATQDCFLVNQFISASLG 85
S P++ P+ + ++ +R+++ C+++N + ++A +I+ N +D + + ISA
Sbjct: 4 SLPVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSL 63
Query: 86 FNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRALQCYVHLLESKALPTSYTFSSL 145
+ V VF Q++ PNV + N++IR + P++A + + ++T+ L
Sbjct: 64 CRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFL 123
Query: 146 VKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDFYSNLERLS--EARKVFDEMRER 205
+KAC+ + + +M+H HI K G SD++V ALID YS L +A K+F++M ER
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 206 DTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMIDGYAR--------------- 265
DT +W +M+ L +AG++ ARRLF+EMP+R ++WNTM+DGYAR
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 266 ----------------LGNVESAEFLFNQM--PARDIISWTTMISCYSQNKRYREALTIY 325
G++E A +F++M PA+++++WT +I+ Y++ +EA +
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 326 DDMRVNGIIPDEVALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKC 385
D M +G+ D A+ ++++AC G L LG IH + L + Y+ +AL+DMYAKC
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKC 363
Query: 386 GSLDWSLLVFFKLKDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISIL 445
G+L + VF + K+L WN ++ GL VHG ++A+ +F M RE I P++VTFI++L
Sbjct: 364 GNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVL 423
Query: 446 SACTHAGLVEEGRSRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPN 505
+C HAGL++EG F S+ + Y + P+VEHYGC+VD+L + G L EA+ ++++M EPN
Sbjct: 424 CSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPN 483
Query: 506 SVVWGALLNGCKLHGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAM 565
V+WGALL C++H +IAK+ ++ L+ L+P + G+Y+LL ++YA + W VA IR+
Sbjct: 484 VVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSK 543
Query: 566 LKEQGVEKKNPGSSWIELEGRIHQFSASADSHPDSGEIYFILTEL 573
+K GVEK + G+S +ELE IH+F+ SHP S +IY +L L
Sbjct: 544 MKSMGVEKPS-GASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
BLAST of Sed0005411 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 405.2 bits (1040), Expect = 9.0e-113
Identity = 216/649 (33.28%), Postives = 352/649 (54.24%), Query Frame = 0
Query: 13 ITRAISTFPCSSISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYASMIKTNATQDCFL 72
+T S++P + P L + NC ++ L I+A MIK +
Sbjct: 8 LTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYA 67
Query: 73 VN---QFISASLGFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRALQCYVHLLE 132
++ +F S F + Y + VF ++ PN+ ++N M RG P AL+ YV ++
Sbjct: 68 LSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 133 SKALPTSYTFSSLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDFYSNLERLSE 192
LP SYTF ++K+C A + G+ IH H+ K G + D++V T+LI Y RL +
Sbjct: 128 LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLED 187
Query: 193 ARKVFDEMRERDTFAWTTMVSVLARAGDMDSARRLFEEMPERYTVTWNTMIDGYARLGN- 252
A KVFD+ RD ++T ++ A G +++A++LF+E+P + V+WN MI GYA GN
Sbjct: 188 AHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNY 247
Query: 253 ------------------------------------------------------------ 312
Sbjct: 248 KEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL 307
Query: 313 ---------VESAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRVNGIIPDE 372
+E+A LF ++P +D+ISW T+I Y+ Y+EAL ++ +M +G P++
Sbjct: 308 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 367
Query: 373 VALSTVVSACAHVGALELGKEIHHYV--MSQGLNFDVYIGSALVDMYAKCGSLDWSLLVF 432
V + +++ ACAH+GA+++G+ IH Y+ +G+ + ++L+DMYAKCG ++ + VF
Sbjct: 368 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 427
Query: 433 FKLKDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVE 492
+ K+L WNA+I G A+HG A+ + +F M + I P+ +TF+ +LSAC+H+G+++
Sbjct: 428 NSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLD 487
Query: 493 EGRSRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNG 552
GR F ++T+DY + P++EHYGCM+D+L +GL EA ++I ME EP+ V+W +LL
Sbjct: 488 LGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKA 547
Query: 553 CKLHGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKN 587
CK+HGN E+ + E L+ +EP+N G Y LL ++YA W EVA RA+L ++G+ KK
Sbjct: 548 CKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGM-KKV 607
BLAST of Sed0005411 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 401.7 bits (1031), Expect = 1.0e-111
Identity = 214/556 (38.49%), Postives = 320/556 (57.55%), Query Frame = 0
Query: 45 IKNCSSVNYLDGIYASMIKTNATQDCFLVNQFIS---ASLGFNCVDYQVLVFTQMENPNV 104
++ CS L I+A M+KT QD + + +F+S +S + + Y +VF + P+
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 105 FVYNAMIRGFVRCGHPFRALQCYVHLLESKALPTSYTFSSLVKACTCMCAVELGRMIHCH 164
F++N MIRGF P R+L Y +L S A +YTF SL+KAC+ + A E IH
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 165 IWKNGFESDVFVQTALIDFYSNLERLSEARKVFDEMRERDTFAWTTMVSVLARAGDMDSA 224
I K G+E+DV+ +LI+ Y A G+ A
Sbjct: 141 ITKLGYENDVYAVNSLINSY-------------------------------AVTGNFKLA 200
Query: 225 RRLFEEMPERYTVTWNTMIDGYARLGNVESAEFLFNQMPARDIISWTTMISCYSQNKRYR 284
LF+ +PE V+WN++I GY + G ++ A LF +M ++ ISWTTMIS Y Q +
Sbjct: 201 HLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNK 260
Query: 285 EALTIYDDMRVNGIIPDEVALSTVVSACAHVGALELGKEIHHYVMSQGLNFDVYIGSALV 344
EAL ++ +M+ + + PD V+L+ +SACA +GALE GK IH Y+ + D +G L+
Sbjct: 261 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 320
Query: 345 DMYAKCGSLDWSLLVFFKLKDKNLYCWNAVIEGLAVHGCAEKALRMFDIMEREKIMPNRV 404
DMYAKCG ++ +L VF +K K++ W A+I G A HG +A+ F M++ I PN +
Sbjct: 321 DMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 380
Query: 405 TFISILSACTHAGLVEEGRSRFLSITRDYGIHPEVEHYGCMVDMLSKAGLLDEALDLIRS 464
TF ++L+AC++ GLVEEG+ F S+ RDY + P +EHYGC+VD+L +AGLLDEA I+
Sbjct: 381 TFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQE 440
Query: 465 MEFEPNSVVWGALLNGCKLHGNWEIAKDAVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEV 524
M +PN+V+WGALL C++H N E+ ++ E L+ ++P + G Y +++A +K W +
Sbjct: 441 MPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKA 500
Query: 525 AHIRAMLKEQGVEKKNPGSSWIELEGRIHQFSASADSHPDSGEIYFILTELDGQLKLAGY 584
A R ++KEQGV K PG S I LEG H+F A SHP+ +I + +L+ GY
Sbjct: 501 AETRRLMKEQGVAKV-PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGY 544
Query: 585 IPELSVCCNILVYTEE 598
+PEL LV +E
Sbjct: 561 VPELEEMLLDLVDDDE 544
BLAST of Sed0005411 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 388.3 bits (996), Expect = 1.1e-107
Identity = 213/643 (33.13%), Postives = 347/643 (53.97%), Query Frame = 0
Query: 24 SISKPLQRPNVHTFKQTLLDRIKNCSSVNYLDGIYASMIKTNATQDCFLVNQF--ISASL 83
+ S P Q P + + + I+ C S+ L + MI+T D + ++ ++A
Sbjct: 17 NFSNPNQ-PTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALS 76
Query: 84 GFNCVDYQVLVFTQMENPNVFVYNAMIRGFVRCGHPFRALQCYVHLL-ESKALPTSYTFS 143
F ++Y VF ++ PN F +N +IR + P ++ ++ ++ ES+ P YTF
Sbjct: 77 SFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFP 136
Query: 144 SLVKACTCMCAVELGRMIHCHIWKNGFESDVFVQTALIDFYSNLERLSEARKVFDEMRER 203
L+KA + ++ LG+ +H K+ SDVFV +LI Y + L A KVF ++E+
Sbjct: 137 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 196
Query: 204 DTFAW--------------------------------TTMVSVLA--------------- 263
D +W TMV VL+
Sbjct: 197 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 256
Query: 264 -----------------------RAGDMDSARRLFEEMPERYTVTWNTMIDGYARLGNVE 323
+ G ++ A+RLF+ M E+ VTW TM+DGYA + E
Sbjct: 257 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 316
Query: 324 SAEFLFNQMPARDIISWTTMISCYSQNKRYREALTIYDDMRV-NGIIPDEVALSTVVSAC 383
+A + N MP +DI++W +IS Y QN + EAL ++ ++++ + +++ L + +SAC
Sbjct: 317 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 376
Query: 384 AHVGALELGKEIHHYVMSQGLNFDVYIGSALVDMYAKCGSLDWSLLVFFKLKDKNLYCWN 443
A VGALELG+ IH Y+ G+ + ++ SAL+ MY+KCG L+ S VF ++ ++++ W+
Sbjct: 377 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 436
Query: 444 AVIEGLAVHGCAEKALRMFDIMEREKIMPNRVTFISILSACTHAGLVEEGRSRFLSITRD 503
A+I GLA+HGC +A+ MF M+ + PN VTF ++ AC+H GLV+E S F + +
Sbjct: 437 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 496
Query: 504 YGIHPEVEHYGCMVDMLSKAGLLDEALDLIRSMEFEPNSVVWGALLNGCKLHGNWEIAKD 563
YGI PE +HY C+VD+L ++G L++A+ I +M P++ VWGALL CK+H N +A+
Sbjct: 497 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 556
Query: 564 AVEQLMTLEPKNCGHYNLLVSMYAEEKHWMEVAHIRAMLKEQGVEKKNPGSSWIELEGRI 593
A +L+ LEP+N G + LL ++YA+ W V+ +R ++ G+ KK PG S IE++G I
Sbjct: 557 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL-KKEPGCSSIEIDGMI 616
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038888390.1 | 7.3e-298 | 85.52 | pentatricopeptide repeat-containing protein At1g06143 [Benincasa hispida] | [more] |
XP_022963550.1 | 3.1e-296 | 85.52 | pentatricopeptide repeat-containing protein At1g06143 [Cucurbita moschata] | [more] |
XP_023554768.1 | 4.0e-296 | 85.52 | pentatricopeptide repeat-containing protein At1g06143 [Cucurbita pepo subsp. pep... | [more] |
XP_022967388.1 | 1.2e-295 | 85.35 | pentatricopeptide repeat-containing protein At1g06143 [Cucurbita maxima] | [more] |
KAG6571513.1 | 2.0e-295 | 85.35 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
Q56X05 | 2.7e-178 | 54.28 | Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX... | [more] |
Q9LS72 | 9.4e-115 | 36.24 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 1.3e-111 | 33.28 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9FJY7 | 1.4e-110 | 38.49 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
O82380 | 1.6e-106 | 33.13 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HIB3 | 1.5e-296 | 85.52 | pentatricopeptide repeat-containing protein At1g06143 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1HUY6 | 5.6e-296 | 85.35 | pentatricopeptide repeat-containing protein At1g06143 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1BWV2 | 2.1e-287 | 81.27 | pentatricopeptide repeat-containing protein At1g06143 OS=Momordica charantia OX=... | [more] |
A0A5A7T9J0 | 4.0e-286 | 80.97 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BHH1 | 4.0e-286 | 80.97 | pentatricopeptide repeat-containing protein At1g06145-like OS=Cucumis melo OX=36... | [more] |
Match Name | E-value | Identity | Description | |
AT1G06150.1 | 1.9e-179 | 54.28 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | [more] |
AT3G29230.1 | 6.7e-116 | 36.24 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 9.0e-113 | 33.28 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G66520.1 | 1.0e-111 | 38.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 1.1e-107 | 33.13 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |