Homology
BLAST of Sed0005385 vs. NCBI nr
Match:
XP_023542006.1 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1037.3 bits (2681), Expect = 5.0e-299
Identity = 508/589 (86.25%), Postives = 546/589 (92.70%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
MSL+ LCLRR+LNIWSKNL+H VSSDDQ LLFLLKSCN TSEISQIHCYMVKTALDLVP
Sbjct: 1 MSLSPALCLRRNLNIWSKNLSHGVSSDDQKLLFLLKSCNGTSEISQIHCYMVKTALDLVP 60
Query: 61 FTLSKLLASAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDF 120
FTLSKLLASAILDIKYAASIFK + PNLFMFNTMLRGYSN DSKQAFV+FNDLRNQDF
Sbjct: 61 FTLSKLLASAILDIKYAASIFKVIRNPNLFMFNTMLRGYSNSDDSKQAFVIFNDLRNQDF 120
Query: 121 LPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARK 180
LPDEFSFITILKACARELA+D G GVHGIVHRSGHGLF+ + N+LLHFYC+CG+IGDARK
Sbjct: 121 LPDEFSFITILKACARELAIDAGQGVHGIVHRSGHGLFSQLNNMLLHFYCACGQIGDARK 180
Query: 181 LFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVG 240
LFDE+PQRNDLVSWNTLMGGYLHASQP VVLD FRQMCRRGLI GANT+LTVSSAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMGGYLHASQPTVVLDFFRQMCRRGLIAGANTVLTVSSAVGDVG 240
Query: 241 SSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLID 300
SLDGRSLHGQCIK GLC DLNVVTCLI+MYAKF DLE GQ+IFDEVAEKDV++WNCLID
Sbjct: 241 HSLDGRSLHGQCIKLGLCSDLNVVTCLINMYAKFKDLESGQLIFDEVAEKDVVVWNCLID 300
Query: 301 NYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVL 360
NYARNGMLEIAI +LHLMK EGK+PNSSTLAGLLSAC+TF AV TGKYLG+YVEEE LVL
Sbjct: 301 NYARNGMLEIAIDSLHLMKHEGKQPNSSTLAGLLSACSTFGAVGTGKYLGHYVEEEGLVL 360
Query: 361 DAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRME 420
DAVLGTALI+MYAKCGFLDKAIDIF KIKDKDVKTWT MITGYGAHGQTKKAI+TL+RME
Sbjct: 361 DAVLGTALIDMYAKCGFLDKAIDIFDKIKDKDVKTWTAMITGYGAHGQTKKAIDTLFRME 420
Query: 421 EDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
E+GFRPNE+ FLAVLNACSHGGIV+EG+RCFKRMVYEY MTPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNACSHGGIVIEGMRCFKRMVYEYRMTPKIEHYGCIIDLLGRAGLL 480
Query: 481 EEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTY 540
EEAH LIKSLP +GD+TGWRALLAACRVYGDVELGESVKR+LVDLNDEHPTDSMLL STY
Sbjct: 481 EEAHKLIKSLPSEGDITGWRALLAACRVYGDVELGESVKRMLVDLNDEHPTDSMLLSSTY 540
Query: 541 AIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
A+AGRLSDYTQ Q+ EEE++MK SSQM EK +KEAGRS+IEM+NL
Sbjct: 541 AVAGRLSDYTQYQQIEEENRMKEGISSSQMRTEKARKEAGRSMIEMDNL 589
BLAST of Sed0005385 vs. NCBI nr
Match:
KAG6574062.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1031.6 bits (2666), Expect = 2.7e-297
Identity = 504/589 (85.57%), Postives = 545/589 (92.53%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
MSL+H LCLRR+LNIWSKNL+H VSSDDQ LLFLLKSCN TSEISQIHCYMVKTALDLVP
Sbjct: 1 MSLSHALCLRRNLNIWSKNLSHGVSSDDQKLLFLLKSCNGTSEISQIHCYMVKTALDLVP 60
Query: 61 FTLSKLLASAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDF 120
FTLSKLLASAILDIKYAASIFK + PNLFMFNTMLRGYSN DSKQAFV+FN LRNQ+F
Sbjct: 61 FTLSKLLASAILDIKYAASIFKVIRNPNLFMFNTMLRGYSNSDDSKQAFVIFNQLRNQNF 120
Query: 121 LPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARK 180
LPDEFSFITILKACARELA++ G G+HG+VHRSGHGLF+H+ N+LLHFYC+CG+IG+ARK
Sbjct: 121 LPDEFSFITILKACARELAINPGQGIHGLVHRSGHGLFSHLNNMLLHFYCACGQIGNARK 180
Query: 181 LFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVG 240
LFDE+PQRNDLVSWNTLMGGYLHASQP VVLD FRQMCR GLI GANT+LTVSSAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMGGYLHASQPTVVLDFFRQMCREGLIAGANTVLTVSSAVGDVG 240
Query: 241 SSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLID 300
SLDGRSLHGQCIK GLC DLNVVTCLI+MYAKF DLE GQ+IFDEVAEKDVILWNCLID
Sbjct: 241 YSLDGRSLHGQCIKLGLCSDLNVVTCLINMYAKFKDLESGQLIFDEVAEKDVILWNCLID 300
Query: 301 NYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVL 360
NYARNGMLEIAI +LHLMK EGKKPNSSTLAGLLSAC+TF AV TGKYLG+YVEEE LVL
Sbjct: 301 NYARNGMLEIAIDSLHLMKHEGKKPNSSTLAGLLSACSTFGAVGTGKYLGHYVEEEGLVL 360
Query: 361 DAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRME 420
DAVLGTALI+MYAKCGFLDKAIDIF KIKDKDVKTWT MITGYGAHGQT+KAI+TL+RME
Sbjct: 361 DAVLGTALIDMYAKCGFLDKAIDIFDKIKDKDVKTWTAMITGYGAHGQTRKAIDTLFRME 420
Query: 421 EDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
E+GFRPNE+ FLAVLNACSHGGIV+EG+RCFKRMVYEY MTPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNACSHGGIVIEGMRCFKRMVYEYRMTPKIEHYGCIIDLLGRAGLL 480
Query: 481 EEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTY 540
EEAH LIKSLP +GD+TGWRALLAACRVYGDVELGESV R+LVDLNDEHPTDSMLL STY
Sbjct: 481 EEAHKLIKSLPSEGDITGWRALLAACRVYGDVELGESVMRMLVDLNDEHPTDSMLLSSTY 540
Query: 541 AIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
A+AGRLSDYTQ Q+ EEE++MK SSQM EK +KEAGRS+IEM+NL
Sbjct: 541 AVAGRLSDYTQYQQIEEENRMKEGISSSQMRTEKARKEAGRSMIEMDNL 589
BLAST of Sed0005385 vs. NCBI nr
Match:
XP_022945629.1 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucurbita moschata])
HSP 1 Score: 1030.0 bits (2662), Expect = 7.9e-297
Identity = 503/589 (85.40%), Postives = 545/589 (92.53%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
MSL+H CLRR+LNIWSKNL+H +SSDDQ LLFLLKSCN TSEISQIHCYMVKTALDLVP
Sbjct: 1 MSLSHASCLRRNLNIWSKNLSHGISSDDQKLLFLLKSCNGTSEISQIHCYMVKTALDLVP 60
Query: 61 FTLSKLLASAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDF 120
FTLSKLLASAILDIKYAASIFK + PNLFMFNTMLRGYSN DSKQAFV+FN LRNQ+F
Sbjct: 61 FTLSKLLASAILDIKYAASIFKVIRNPNLFMFNTMLRGYSNSDDSKQAFVIFNQLRNQNF 120
Query: 121 LPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARK 180
LPDEFSFITILKACARELA++ G G+HG+VHRSGHGLF+H+ N+LLHFYC+CG+IG+ARK
Sbjct: 121 LPDEFSFITILKACARELAINPGQGIHGLVHRSGHGLFSHLNNMLLHFYCACGQIGNARK 180
Query: 181 LFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVG 240
LFDE+PQRNDLVSWNTLMGGYLHASQP VVLD FRQMCR GLI GANT+LTVSSAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMGGYLHASQPTVVLDFFRQMCREGLIAGANTVLTVSSAVGDVG 240
Query: 241 SSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLID 300
SLDGRSLHGQCIK GLC DLNVVTCLI+M AKF DLE GQ+IFDEVAEKDVILWNCLID
Sbjct: 241 YSLDGRSLHGQCIKLGLCSDLNVVTCLINMCAKFKDLESGQLIFDEVAEKDVILWNCLID 300
Query: 301 NYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVL 360
NYARNGMLEIAI +LHLMK EGKKPNSSTLAGLLSAC+TF AV TGKYLG+YVEEE LVL
Sbjct: 301 NYARNGMLEIAIDSLHLMKHEGKKPNSSTLAGLLSACSTFGAVGTGKYLGHYVEEEGLVL 360
Query: 361 DAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRME 420
DAVLGTALI+MYAKCGFLDKAIDIF KIKDKDVKTWT MITGYGAHGQT+KAI+TL+RME
Sbjct: 361 DAVLGTALIDMYAKCGFLDKAIDIFDKIKDKDVKTWTAMITGYGAHGQTRKAIDTLFRME 420
Query: 421 EDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
E+GFRPNE+ FLAVLNACSHGGIV+EG+RCFKRMVYEY MTPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNACSHGGIVIEGMRCFKRMVYEYRMTPKIEHYGCIIDLLGRAGLL 480
Query: 481 EEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTY 540
EEAH LIKSLP +GD+TGWRALLAACRVYGDVELGESVKR+LVDLNDEHPTDSMLL STY
Sbjct: 481 EEAHKLIKSLPSEGDITGWRALLAACRVYGDVELGESVKRMLVDLNDEHPTDSMLLSSTY 540
Query: 541 AIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
A+AGRLSDYTQ Q+ EEE++MK RSSQM EK +KEAGRS+IEM+NL
Sbjct: 541 AVAGRLSDYTQYQQIEEENRMKEGIRSSQMRTEKARKEAGRSMIEMDNL 589
BLAST of Sed0005385 vs. NCBI nr
Match:
KAG7013122.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1029.2 bits (2660), Expect = 1.3e-296
Identity = 503/589 (85.40%), Postives = 544/589 (92.36%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
MSL+H LCLRR+LNIWSKNL+H VSSDDQ LLFLLKSCN TSEISQIHCYMVKTALDLVP
Sbjct: 1 MSLSHALCLRRNLNIWSKNLSHGVSSDDQKLLFLLKSCNGTSEISQIHCYMVKTALDLVP 60
Query: 61 FTLSKLLASAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDF 120
FTLSKLLASAILDIKYAASIFK + PNLFMFNTMLRGYSN DSKQAFV+FN LRNQ+F
Sbjct: 61 FTLSKLLASAILDIKYAASIFKVIRNPNLFMFNTMLRGYSNSDDSKQAFVIFNQLRNQNF 120
Query: 121 LPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARK 180
LPDEFSFITILKACARELA++ G G+HG+VHRSGHGLF+H+ N+LLHFYC+CG+IG+ARK
Sbjct: 121 LPDEFSFITILKACARELAINPGQGIHGLVHRSGHGLFSHLNNMLLHFYCACGQIGNARK 180
Query: 181 LFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVG 240
LFDE+PQRNDLVSWNTLMGGYLHASQP VVLD FRQMCR GLI GANT+LTVSSAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMGGYLHASQPTVVLDFFRQMCREGLIAGANTVLTVSSAVGDVG 240
Query: 241 SSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLID 300
SLDGRSLHGQCIK GLC DLNVVTCLI+MYAKF DLE GQ+IFDEVAEKDVILWNCLID
Sbjct: 241 YSLDGRSLHGQCIKLGLCSDLNVVTCLINMYAKFKDLESGQLIFDEVAEKDVILWNCLID 300
Query: 301 NYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVL 360
NYARNGMLEIAI +LHLMK EGKKPNSSTLAGLLSAC+TF AV TGKYLG+YVEEE LVL
Sbjct: 301 NYARNGMLEIAIDSLHLMKHEGKKPNSSTLAGLLSACSTFGAVGTGKYLGHYVEEEGLVL 360
Query: 361 DAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRME 420
DAVLGTALI+MYAKCGFLDKAIDIF KIKDKDVKTWT MITGYGAHGQT+KAI+TL+RME
Sbjct: 361 DAVLGTALIDMYAKCGFLDKAIDIFDKIKDKDVKTWTAMITGYGAHGQTRKAIDTLFRME 420
Query: 421 EDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
E+GFRPNE+ FLAVLNACSHGGIV+EG+RCFKRMVYEY MTPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNACSHGGIVIEGMRCFKRMVYEYRMTPKIEHYGCIIDLLGRAGLL 480
Query: 481 EEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTY 540
EEAH LIKSLP +GD+T WRALLAACRVYGDVELGESV R+LVDLNDEHPTDSMLL STY
Sbjct: 481 EEAHKLIKSLPSEGDITSWRALLAACRVYGDVELGESVMRMLVDLNDEHPTDSMLLSSTY 540
Query: 541 AIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
A+AGRLSDYTQ Q+ EEE++MK SSQM EK +KEAGRS+IEM+NL
Sbjct: 541 AVAGRLSDYTQYQQIEEENRMKEGISSSQMRTEKARKEAGRSMIEMDNL 589
BLAST of Sed0005385 vs. NCBI nr
Match:
XP_022968106.1 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucurbita maxima])
HSP 1 Score: 1028.1 bits (2657), Expect = 3.0e-296
Identity = 501/589 (85.06%), Postives = 541/589 (91.85%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
MSL+H LCLRR+LNIWSKNL H VSSDDQ LLFLLKSCN TS+ISQIHCYMVKTALDLVP
Sbjct: 1 MSLSHALCLRRNLNIWSKNLGHGVSSDDQKLLFLLKSCNGTSDISQIHCYMVKTALDLVP 60
Query: 61 FTLSKLLASAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDF 120
FTLSKLLAS ILDI YAASIFK + PNLFMFNTMLRGYSN DSKQAFV+FNDLRNQDF
Sbjct: 61 FTLSKLLASTILDINYAASIFKVIRNPNLFMFNTMLRGYSNSDDSKQAFVIFNDLRNQDF 120
Query: 121 LPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARK 180
LPDEFSFITILKACARELA++ G G+HGIVHRSGHGLF+H+ N+LLHFYC+CG+IGDARK
Sbjct: 121 LPDEFSFITILKACARELAINSGQGIHGIVHRSGHGLFSHLNNMLLHFYCACGQIGDARK 180
Query: 181 LFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVG 240
LFDE+PQRNDLVSWNTLMGGYLHASQP VVLD FRQMCRRGLI GA T+LTVSSAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMGGYLHASQPTVVLDFFRQMCRRGLIAGAYTVLTVSSAVGDVG 240
Query: 241 SSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLID 300
SLDGRSLHGQCIK GLC DLNVVTCLI+MYAKF DLE GQ+IFDEVAEKDV+LWNCLID
Sbjct: 241 YSLDGRSLHGQCIKLGLCSDLNVVTCLINMYAKFKDLESGQLIFDEVAEKDVVLWNCLID 300
Query: 301 NYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVL 360
NYARNGMLEIAI +LHLMK EGK+PNSSTLAGLLSAC+TF AV TGKYLG+YVEEE LVL
Sbjct: 301 NYARNGMLEIAIDSLHLMKHEGKQPNSSTLAGLLSACSTFGAVGTGKYLGHYVEEEGLVL 360
Query: 361 DAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRME 420
D LGTALI+MYAKCGFLDKAIDIF KIKDKDVKTWT MITGYGAHGQT+KAI+TL+RME
Sbjct: 361 DTALGTALIDMYAKCGFLDKAIDIFDKIKDKDVKTWTAMITGYGAHGQTRKAIDTLFRME 420
Query: 421 EDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
E+GFRPNE+ FLAVLNACSHGGIV+EG+RCFKRMVYEY MTPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNACSHGGIVIEGMRCFKRMVYEYRMTPKIEHYGCIIDLLGRAGLL 480
Query: 481 EEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTY 540
EEAH LIKSLP +GD+TGWRALLAACRVYGDVELGES R+LVDLNDEHPTDSMLL STY
Sbjct: 481 EEAHKLIKSLPSEGDITGWRALLAACRVYGDVELGESAMRMLVDLNDEHPTDSMLLSSTY 540
Query: 541 AIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
A+AGRLSDYTQ Q+ EEE++MK RSSQM EK +KEAGRS+IEM+NL
Sbjct: 541 AVAGRLSDYTQYQQIEEENRMKEGIRSSQMQTEKARKEAGRSMIEMDNL 589
BLAST of Sed0005385 vs. ExPASy Swiss-Prot
Match:
Q9ZVG8 (Pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E54 PE=2 SV=1)
HSP 1 Score: 589.3 bits (1518), Expect = 4.7e-167
Identity = 298/589 (50.59%), Postives = 399/589 (67.74%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
M+LA T LRR+ +NL +S Q L+ L+SC T E+S+IH YMVKT LD
Sbjct: 1 MTLAITSRLRRNFVFRRRNLESLLSPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDD 60
Query: 61 FTLSKLLA-SAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQD 120
F +SKLLA S++LDI+YA+SIF+ NLFMFNTM+RGYS + ++AF VFN LR +
Sbjct: 61 FAVSKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKG 120
Query: 121 FLPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDAR 180
D FSFIT LK+C+REL + +G G+HGI RSG +F + N L+HFYC CG+I DAR
Sbjct: 121 LTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDAR 180
Query: 181 KLFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDV 240
K+FDE+PQ D V+++TLM GYL S+ + LD+FR M + ++V +T+L+ SA+ D+
Sbjct: 181 KVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDL 240
Query: 241 GSSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLI 300
G S H CIK GL DL+++T LI MY K + + IFD KDV+ WNC+I
Sbjct: 241 GDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMI 300
Query: 301 DNYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLV 360
D YA+ G+LE + L MK E KPNSST GLLS+CA +A G+ + + +EEE +
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIA 360
Query: 361 LDAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRM 420
LDA+LGTAL++MYAK G L+KA++IF ++KDKDVK+WT MI+GYGAHG ++A+ +M
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
Query: 421 EEDG--FRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRA 480
EE+ RPNE+ FL VLNACSHGG+V+EG+RCFKRMV Y TPK+EHYGC++DLLGRA
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480
Query: 481 GLLEEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLY 540
G LEEA+ LI++LP D T WRALLAACRVYG+ +LGESV L ++ + HP D++LL
Sbjct: 481 GQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLA 540
Query: 541 STYAIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEM 587
T+A+AG ++ + E + K +KEAG S IE+
Sbjct: 541 GTHAVAG-----NPEKSLDNE-------------LNKGRKEAGYSAIEI 571
BLAST of Sed0005385 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 345.5 bits (885), Expect = 1.2e-93
Identity = 192/579 (33.16%), Postives = 305/579 (52.68%), Query Frame = 0
Query: 32 LFLLKSCNRTSEISQIHCYMVKTALDLVPFTLSKLLASAILD-----IKYAASIFKDTQT 91
L LL +C + IH M+K L + LSKL+ IL + YA S+FK Q
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 92 PNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDFLPDEFSFITILKACARELALDVGWGV 151
PNL ++NTM RG++ D A ++ + + LP+ ++F +LK+CA+ A G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 152 HGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARKLFDELPQRN----------------- 211
HG V + G L +V+ L+ Y GR+ DA K+FD+ P R+
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 212 -------------DLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAV 271
D+VSWN ++ GY L++F+ M + + +T++TV SA
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 272 GDVGSSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWN 331
GS GR +H G +L +V LID+Y+K +LE +F+ + KDVI WN
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 332 CLIDNYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEE- 391
LI Y + + A+ M G+ PN T+ +L ACA A+ G+++ Y+++
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 392 -EDLVLDAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIE 451
+ + + L T+LI+MYAKCG ++ A +F I K + +W MI G+ HG+ + +
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 452 TLYRMEEDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLL 511
RM + G +P+++ F+ +L+ACSH G++ G F+ M +Y MTPK+EHYGC+IDLL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 512 GRAGLLEEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSM 571
G +GL +EA +I + + D W +LL AC+++G+VELGES L+ + E+P +
Sbjct: 517 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 576
Query: 572 LLYSTYAIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIE 574
LL + YA AGR ++ + + + MK V S + I+
Sbjct: 577 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 615
BLAST of Sed0005385 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 327.8 bits (839), Expect = 2.5e-88
Identity = 179/530 (33.77%), Postives = 293/530 (55.28%), Query Frame = 0
Query: 34 LLKSCNRTSEISQIHCYMVKTALDLVPFTLSKLL--ASAILDIKYAASIFKDTQTPNLFM 93
L+ S +++ QIH ++ L F ++KL+ +S+ DI +A +F D P +F
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86
Query: 94 FNTMLRGYSNCPDSKQAFVVFNDLRNQDFLPDEFSFITILKACARELALDVGWGVHGIVH 153
+N ++RGYS + A +++++++ PD F+F +LKAC+ L +G VH V
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 154 RSGHGLFNHVYNILLHFYCSCGRIGDARKLFDELP-QRNDLVSWNTLMGGYLHASQPIVV 213
R G V N L+ Y C R+G AR +F+ LP +VSW ++ Y +P+
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 214 LDIFRQMCRRGLIVGANTILTVSSAVGDVGSSLDGRSLHGQCIKFGLCFDLNVVTCLIDM 273
L+IF QM + + +++V +A + GRS+H +K GL + +++ L M
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 274 YAKFNDLELGQMIFDEVAEKDVILWNCLIDNYARNGMLEIAIATLHLMKLEGKKPNSSTL 333
YAK + +++FD++ ++ILWN +I YA+NG AI H M + +P++ ++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 334 AGLLSACATFDAVSTGKYLGNYVEEEDLVLDAVLGTALINMYAKCGFLDKAIDIFCKIKD 393
+SACA ++ + + YV D D + +ALI+M+AKCG ++ A +F + D
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 394 KDVKTWTTMITGYGAHGQTKKAIETLYRMEEDGFRPNEVAFLAVLNACSHGGIVVEGLRC 453
+DV W+ MI GYG HG+ ++AI ME G PN+V FL +L AC+H G+V EG
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 454 FKRMVYEYGMTPKIEHYGCIIDLLGRAGLLEEAHNLIKSLPFKGDVTGWRALLAACRVYG 513
F RM ++ + P+ +HY C+IDLLGRAG L++A+ +IK +P + VT W ALL+AC+ +
Sbjct: 447 FNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 506
Query: 514 DVELGESVKRVLVDLNDEHPTDSMLLYSTYAIAGRLSDYTQDQKAEEEHK 561
VELGE + L ++ + + L + YA A RL D + + + K
Sbjct: 507 HVELGEYAAQQLFSIDPSNTGHYVQLSNLYA-AARLWDRVAEVRVRMKEK 554
BLAST of Sed0005385 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 321.2 bits (822), Expect = 2.4e-86
Identity = 183/597 (30.65%), Postives = 308/597 (51.59%), Query Frame = 0
Query: 31 LLFLLKSCNRTSEISQIHCYMVKTALDLVPFTLSKLLASAILD----IKYAASIFKDTQT 90
LL LL+ C + QI M+ L L PF S+L+A L + Y+ I K +
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 91 PNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQ---DFLPDEFSFITILKACARELALDVG 150
PN+F +N +RG+S + K++F+++ + + PD F++ + K CA +G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 151 WGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARKLFDELPQRNDLVSWNTLMGGYLH 210
+ G V + L +HV+N +H + SCG + +ARK+FDE P R DLVSWN L+ GY
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR-DLVSWNCLINGYKK 235
Query: 211 ASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVGSSLDGRSLHGQCIKFGLCFDLNV 270
+ + +++ M G+ T++ + S+ +G G+ + + GL + +
Sbjct: 236 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 295
Query: 271 VTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLIDNYARNGMLEI------------- 330
V L+DM++K D+ + IFD + ++ ++ W +I YAR G+L++
Sbjct: 296 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 355
Query: 331 ------------------AIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNY 390
A+A M+ KP+ T+ LSAC+ A+ G ++ Y
Sbjct: 356 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 415
Query: 391 VEEEDLVLDAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKA 450
+E+ L L+ LGT+L++MYAKCG + +A+ +F I+ ++ T+T +I G HG A
Sbjct: 416 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 475
Query: 451 IETLYRMEEDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIID 510
I M + G P+E+ F+ +L+AC HGG++ G F +M + + P+++HY ++D
Sbjct: 476 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 535
Query: 511 LLGRAGLLEEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTD 570
LLGRAGLLEEA L++S+P + D W ALL CR++G+VELGE + L++L+ P+D
Sbjct: 536 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD---PSD 595
Query: 571 SMLLYSTYAIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
S + + G + + ++A +GV +K G S IE+N +
Sbjct: 596 SGIYVLLDGMYGEANMWEDAKRARRMMNERGV-----------EKIPGCSSIEVNGI 637
BLAST of Sed0005385 vs. ExPASy Swiss-Prot
Match:
P0C898 (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H86 PE=3 SV=1)
HSP 1 Score: 318.9 bits (816), Expect = 1.2e-85
Identity = 181/572 (31.64%), Postives = 309/572 (54.02%), Query Frame = 0
Query: 24 VSSDDQNLLFLLKSCNR---TSEISQIHCYMVKTALDLVPFTLSKL--LASAILDIKYAA 83
+ + QNL+ +L+ C R + + Q+HCY++K+ L T + L + + A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 84 SIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDFLPDEFSFITILKACAREL 143
+F N+ ++ ++ G+ D K + +F+++ Q P+EF+F T LKAC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 144 ALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARKLFDELPQRNDLVSWNTLM 203
AL+ G +HG + G + V N L+ Y CGRI +A K+F + R+ L+SWN ++
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRS-LISWNAMI 181
Query: 204 GGYLHASQPIVVLDIFRQMCRRGLIVGAN--TILTVSSAVGDVGSSLDGRSLHGQCIKFG 263
G++HA LD F M + + T+ ++ A G G+ +HG ++ G
Sbjct: 182 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 241
Query: 264 L-CFDLNVVT-CLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLIDNYARNGMLEIAIAT 323
C +T L+D+Y K L + FD++ EK +I W+ LI YA+ G A+
Sbjct: 242 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 301
Query: 324 LHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVLDAVLGTALINMYAK 383
++ + +S L+ ++ A F + GK + + L+ + ++++MY K
Sbjct: 302 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 361
Query: 384 CGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRMEEDGFRPNEVAFLAV 443
CG +D+A F +++ KDV +WT +ITGYG HG KK++ Y M P+EV +LAV
Sbjct: 362 CGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAV 421
Query: 444 LNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLLEEAHNLIKSLPFKG 503
L+ACSH G++ EG F +++ +G+ P++EHY C++DLLGRAG L+EA +LI ++P K
Sbjct: 422 LSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKP 481
Query: 504 DVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTYAIAGRLSDYTQDQK 563
+V W+ LL+ CRV+GD+ELG+ V ++L+ ++ ++P + +++ + Y AG + +
Sbjct: 482 NVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGY---WNEQGN 541
Query: 564 AEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEM 587
A E +KG+ KKEAG S +E+
Sbjct: 542 ARELGNIKGL-----------KKEAGMSWVEI 558
BLAST of Sed0005385 vs. ExPASy TrEMBL
Match:
A0A6J1G1H6 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449812 PE=4 SV=1)
HSP 1 Score: 1030.0 bits (2662), Expect = 3.8e-297
Identity = 503/589 (85.40%), Postives = 545/589 (92.53%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
MSL+H CLRR+LNIWSKNL+H +SSDDQ LLFLLKSCN TSEISQIHCYMVKTALDLVP
Sbjct: 1 MSLSHASCLRRNLNIWSKNLSHGISSDDQKLLFLLKSCNGTSEISQIHCYMVKTALDLVP 60
Query: 61 FTLSKLLASAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDF 120
FTLSKLLASAILDIKYAASIFK + PNLFMFNTMLRGYSN DSKQAFV+FN LRNQ+F
Sbjct: 61 FTLSKLLASAILDIKYAASIFKVIRNPNLFMFNTMLRGYSNSDDSKQAFVIFNQLRNQNF 120
Query: 121 LPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARK 180
LPDEFSFITILKACARELA++ G G+HG+VHRSGHGLF+H+ N+LLHFYC+CG+IG+ARK
Sbjct: 121 LPDEFSFITILKACARELAINPGQGIHGLVHRSGHGLFSHLNNMLLHFYCACGQIGNARK 180
Query: 181 LFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVG 240
LFDE+PQRNDLVSWNTLMGGYLHASQP VVLD FRQMCR GLI GANT+LTVSSAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMGGYLHASQPTVVLDFFRQMCREGLIAGANTVLTVSSAVGDVG 240
Query: 241 SSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLID 300
SLDGRSLHGQCIK GLC DLNVVTCLI+M AKF DLE GQ+IFDEVAEKDVILWNCLID
Sbjct: 241 YSLDGRSLHGQCIKLGLCSDLNVVTCLINMCAKFKDLESGQLIFDEVAEKDVILWNCLID 300
Query: 301 NYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVL 360
NYARNGMLEIAI +LHLMK EGKKPNSSTLAGLLSAC+TF AV TGKYLG+YVEEE LVL
Sbjct: 301 NYARNGMLEIAIDSLHLMKHEGKKPNSSTLAGLLSACSTFGAVGTGKYLGHYVEEEGLVL 360
Query: 361 DAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRME 420
DAVLGTALI+MYAKCGFLDKAIDIF KIKDKDVKTWT MITGYGAHGQT+KAI+TL+RME
Sbjct: 361 DAVLGTALIDMYAKCGFLDKAIDIFDKIKDKDVKTWTAMITGYGAHGQTRKAIDTLFRME 420
Query: 421 EDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
E+GFRPNE+ FLAVLNACSHGGIV+EG+RCFKRMVYEY MTPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNACSHGGIVIEGMRCFKRMVYEYRMTPKIEHYGCIIDLLGRAGLL 480
Query: 481 EEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTY 540
EEAH LIKSLP +GD+TGWRALLAACRVYGDVELGESVKR+LVDLNDEHPTDSMLL STY
Sbjct: 481 EEAHKLIKSLPSEGDITGWRALLAACRVYGDVELGESVKRMLVDLNDEHPTDSMLLSSTY 540
Query: 541 AIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
A+AGRLSDYTQ Q+ EEE++MK RSSQM EK +KEAGRS+IEM+NL
Sbjct: 541 AVAGRLSDYTQYQQIEEENRMKEGIRSSQMRTEKARKEAGRSMIEMDNL 589
BLAST of Sed0005385 vs. ExPASy TrEMBL
Match:
A0A6J1HTY2 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467439 PE=4 SV=1)
HSP 1 Score: 1028.1 bits (2657), Expect = 1.5e-296
Identity = 501/589 (85.06%), Postives = 541/589 (91.85%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
MSL+H LCLRR+LNIWSKNL H VSSDDQ LLFLLKSCN TS+ISQIHCYMVKTALDLVP
Sbjct: 1 MSLSHALCLRRNLNIWSKNLGHGVSSDDQKLLFLLKSCNGTSDISQIHCYMVKTALDLVP 60
Query: 61 FTLSKLLASAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDF 120
FTLSKLLAS ILDI YAASIFK + PNLFMFNTMLRGYSN DSKQAFV+FNDLRNQDF
Sbjct: 61 FTLSKLLASTILDINYAASIFKVIRNPNLFMFNTMLRGYSNSDDSKQAFVIFNDLRNQDF 120
Query: 121 LPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARK 180
LPDEFSFITILKACARELA++ G G+HGIVHRSGHGLF+H+ N+LLHFYC+CG+IGDARK
Sbjct: 121 LPDEFSFITILKACARELAINSGQGIHGIVHRSGHGLFSHLNNMLLHFYCACGQIGDARK 180
Query: 181 LFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVG 240
LFDE+PQRNDLVSWNTLMGGYLHASQP VVLD FRQMCRRGLI GA T+LTVSSAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMGGYLHASQPTVVLDFFRQMCRRGLIAGAYTVLTVSSAVGDVG 240
Query: 241 SSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLID 300
SLDGRSLHGQCIK GLC DLNVVTCLI+MYAKF DLE GQ+IFDEVAEKDV+LWNCLID
Sbjct: 241 YSLDGRSLHGQCIKLGLCSDLNVVTCLINMYAKFKDLESGQLIFDEVAEKDVVLWNCLID 300
Query: 301 NYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVL 360
NYARNGMLEIAI +LHLMK EGK+PNSSTLAGLLSAC+TF AV TGKYLG+YVEEE LVL
Sbjct: 301 NYARNGMLEIAIDSLHLMKHEGKQPNSSTLAGLLSACSTFGAVGTGKYLGHYVEEEGLVL 360
Query: 361 DAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRME 420
D LGTALI+MYAKCGFLDKAIDIF KIKDKDVKTWT MITGYGAHGQT+KAI+TL+RME
Sbjct: 361 DTALGTALIDMYAKCGFLDKAIDIFDKIKDKDVKTWTAMITGYGAHGQTRKAIDTLFRME 420
Query: 421 EDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
E+GFRPNE+ FLAVLNACSHGGIV+EG+RCFKRMVYEY MTPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNACSHGGIVIEGMRCFKRMVYEYRMTPKIEHYGCIIDLLGRAGLL 480
Query: 481 EEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTY 540
EEAH LIKSLP +GD+TGWRALLAACRVYGDVELGES R+LVDLNDEHPTDSMLL STY
Sbjct: 481 EEAHKLIKSLPSEGDITGWRALLAACRVYGDVELGESAMRMLVDLNDEHPTDSMLLSSTY 540
Query: 541 AIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
A+AGRLSDYTQ Q+ EEE++MK RSSQM EK +KEAGRS+IEM+NL
Sbjct: 541 AVAGRLSDYTQYQQIEEENRMKEGIRSSQMQTEKARKEAGRSMIEMDNL 589
BLAST of Sed0005385 vs. ExPASy TrEMBL
Match:
A0A6J1DA73 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111019088 PE=4 SV=1)
HSP 1 Score: 1001.9 bits (2589), Expect = 1.1e-288
Identity = 489/589 (83.02%), Postives = 533/589 (90.49%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
MSLAH LCLRR+LN WSKN++HAV SDDQ LL LLKSCN TSEISQIHCYMVKTALDLVP
Sbjct: 1 MSLAHALCLRRNLNTWSKNISHAVFSDDQKLLLLLKSCNGTSEISQIHCYMVKTALDLVP 60
Query: 61 FTLSKLLASAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDF 120
FT SKLLASAILDIKYAASIF+D + PNLFMFNT+LRGYSN DS+QAFV+FNDLRNQ+F
Sbjct: 61 FTSSKLLASAILDIKYAASIFRDIRNPNLFMFNTLLRGYSNSDDSRQAFVIFNDLRNQNF 120
Query: 121 LPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARK 180
LPDEFSFITILKACARELA++ G G+HGIVHR+GHGLFNHV N+LLHFYCSCG+I DARK
Sbjct: 121 LPDEFSFITILKACARELAINTGQGIHGIVHRTGHGLFNHVNNVLLHFYCSCGQIADARK 180
Query: 181 LFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVG 240
LFD++ QRNDLVSWNTLM GYLHASQP VVLD FRQMC RGLI NT+LTVSSAVGD G
Sbjct: 181 LFDDVSQRNDLVSWNTLMSGYLHASQPTVVLDFFRQMCGRGLI-SVNTVLTVSSAVGDAG 240
Query: 241 SSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLID 300
+SLDGRSLHG CIK GLC L+VVTCLIDMYAKF DL GQ IFDEVAEKDVILWNCLID
Sbjct: 241 NSLDGRSLHGHCIKVGLCSGLSVVTCLIDMYAKFGDLVSGQTIFDEVAEKDVILWNCLID 300
Query: 301 NYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVL 360
NYARNGMLE A+ +LHLMKLEG +PNSSTLAGLLSACATF VSTGKYLGNYVEEE L +
Sbjct: 301 NYARNGMLEKAVFSLHLMKLEGIRPNSSTLAGLLSACATFGVVSTGKYLGNYVEEEGLAV 360
Query: 361 DAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRME 420
DAVLGTAL++MYAKCGFLDKAIDIF KI+DKDVK+WT MITGYGAHGQT+KAI TLY ME
Sbjct: 361 DAVLGTALVDMYAKCGFLDKAIDIFDKIEDKDVKSWTAMITGYGAHGQTRKAIRTLYEME 420
Query: 421 EDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
++GF+PNE+ FLAVLNACSHGG+VVEG+RCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL
Sbjct: 421 DEGFQPNEITFLAVLNACSHGGVVVEGMRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
Query: 481 EEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTY 540
EEAHNLIK+LP KGD+TGWRALLAACRVYGDVELGESVKR+LVDLNDEHPTDS+LL STY
Sbjct: 481 EEAHNLIKNLPSKGDITGWRALLAACRVYGDVELGESVKRMLVDLNDEHPTDSVLLSSTY 540
Query: 541 AIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
AIAGRLSDYT+ Q+ +EE++MK TRSS M E KKEAGRSIIEM NL
Sbjct: 541 AIAGRLSDYTRTQQIKEENRMKEETRSSHMQNETAKKEAGRSIIEMENL 588
BLAST of Sed0005385 vs. ExPASy TrEMBL
Match:
A0A1S3CTA0 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103504696 PE=4 SV=1)
HSP 1 Score: 909.1 bits (2348), Expect = 9.8e-261
Identity = 448/589 (76.06%), Postives = 506/589 (85.91%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
MSLA TL LR+ LN SKNL A+SSD LL LL+SCN T++ISQIHCYMVKTA DLVP
Sbjct: 1 MSLAPTLFLRQHLNTCSKNLYFAISSDQAKLLSLLESCNGTTKISQIHCYMVKTAFDLVP 60
Query: 61 FTLSKLLASAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDF 120
FTLSKLLASAILDIKYAASIF++ + PNLFMFNTMLRGYSN +SKQAFV+FNDLRNQDF
Sbjct: 61 FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNESKQAFVIFNDLRNQDF 120
Query: 121 LPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARK 180
LPD FSFIT LKAC RELA+DVG G+HGIV +SGHG FN V NIL+HFYC+CG+I DA K
Sbjct: 121 LPDRFSFITTLKACVRELAIDVGQGIHGIVLKSGHGSFNDVNNILVHFYCNCGQIKDAHK 180
Query: 181 LFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVG 240
LFDE+PQRNDLVSWNTLM GY+ A QP VVLD+FRQMCRRGLI T+L+VSSAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMDGYVRAPQPTVVLDLFRQMCRRGLIANTLTLLSVSSAVGDVG 240
Query: 241 SSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLID 300
+++DGRSL+G C+K GL +L+VVTCLIDMY KF D++ IFDEVAEKDVILWNCLID
Sbjct: 241 NTMDGRSLYGHCVKLGLGSNLHVVTCLIDMYGKFGDVDEAGKIFDEVAEKDVILWNCLID 300
Query: 301 NYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVL 360
NYA+NG+++ A+A+LHLMKLEG KPNSSTLAGL+SACAT AVSTGKYL Y E+E L L
Sbjct: 301 NYAKNGLIKKAVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGKYLAKYAEKEGLDL 360
Query: 361 DAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRME 420
D LGT LI MYAK GFLDKAIDIF K+KDKDVKTW MITGYGAHGQ KA+ET YRME
Sbjct: 361 DVFLGTTLIGMYAKFGFLDKAIDIFDKMKDKDVKTWAAMITGYGAHGQASKAMETSYRME 420
Query: 421 EDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
E+GFRPNE+ FLAVLNA SHGG+V EGL+CFKRMVYEY +TPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNAYSHGGMVAEGLKCFKRMVYEYEITPKIEHYGCIIDLLGRAGLL 480
Query: 481 EEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTY 540
EEAHNL+KSLP KGD+TGWR LLA+CRVYGDVELGE+VKR+LVDLNDEHP DSMLL STY
Sbjct: 481 EEAHNLLKSLPSKGDITGWRTLLASCRVYGDVELGETVKRMLVDLNDEHPADSMLLSSTY 540
Query: 541 AIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
AIAGRLSDYTQ Q+++E +K+K SS+M IEK KKEAG S+IEM +L
Sbjct: 541 AIAGRLSDYTQYQQSKEGNKVKEANGSSRMQIEKAKKEAGCSVIEMESL 589
BLAST of Sed0005385 vs. ExPASy TrEMBL
Match:
A0A0A0KL36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168810 PE=4 SV=1)
HSP 1 Score: 899.4 bits (2323), Expect = 7.8e-258
Identity = 452/590 (76.61%), Postives = 503/590 (85.25%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
MSLA +L R+ LN SKNL A+SSD LL LL+SCN TS+ISQIHCYMVKTALDL P
Sbjct: 1 MSLAPSLFSRQHLNSSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
Query: 61 FTLSKLLASAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDF 120
FTLSKLLASAILDIKYAASIF++ + PNLFMFNTMLRGYSN DSKQAFV+FNDLRNQDF
Sbjct: 61 FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120
Query: 121 LPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARK 180
LPD FSFIT LKACARELA+ VG G+HGIVH+SGHGLFN V NILLHFY +C +I DA K
Sbjct: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNILLHFYGACEQIKDAHK 180
Query: 181 LFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVG 240
LFDE+ QRNDLVSWNTLM GYL ASQPIVVLD FRQMCRRGLI T+L+V+SAVGDVG
Sbjct: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240
Query: 241 SSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLID 300
+++DGRSL+G CIK GL +L VVTCLIDMY KF DL+ IF+EVAEKDVI+WNCLID
Sbjct: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300
Query: 301 NYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVL 360
NYA+NG+++ A+A+LHLMKLEG KPNSSTLAGL+SACAT AVSTGKYL NY + E L L
Sbjct: 301 NYAKNGLIKKAVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGKYLANYADNEGLDL 360
Query: 361 DAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRME 420
D VLGT LI MYAK GFLDKAIDIF K+K+KDVKTWT MITGYG HGQT+K +ETLYRME
Sbjct: 361 DVVLGTTLIGMYAKFGFLDKAIDIFDKMKNKDVKTWTAMITGYGDHGQTRKVMETLYRME 420
Query: 421 EDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480
E+GFRPNE+ FLAVLNA SHGGIV EG++CFKRMVYEYG+TPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480
Query: 481 EEAHNLIKSLP-FKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYST 540
EEAH LIKSLP KGD+TGWR LLAACRVYGDVELGE+VKR LVDLNDEHP DSMLL ST
Sbjct: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540
Query: 541 YAIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
YAIAGRLSDYTQ Q +E +K+K SSQ+ IEK KEAG S+IEM +L
Sbjct: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAIKEAGCSVIEMESL 590
BLAST of Sed0005385 vs. TAIR 10
Match:
AT1G26900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 589.3 bits (1518), Expect = 3.3e-168
Identity = 298/589 (50.59%), Postives = 399/589 (67.74%), Query Frame = 0
Query: 1 MSLAHTLCLRRSLNIWSKNLNHAVSSDDQNLLFLLKSCNRTSEISQIHCYMVKTALDLVP 60
M+LA T LRR+ +NL +S Q L+ L+SC T E+S+IH YMVKT LD
Sbjct: 1 MTLAITSRLRRNFVFRRRNLESLLSPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDD 60
Query: 61 FTLSKLLA-SAILDIKYAASIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQD 120
F +SKLLA S++LDI+YA+SIF+ NLFMFNTM+RGYS + ++AF VFN LR +
Sbjct: 61 FAVSKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKG 120
Query: 121 FLPDEFSFITILKACARELALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDAR 180
D FSFIT LK+C+REL + +G G+HGI RSG +F + N L+HFYC CG+I DAR
Sbjct: 121 LTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDAR 180
Query: 181 KLFDELPQRNDLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDV 240
K+FDE+PQ D V+++TLM GYL S+ + LD+FR M + ++V +T+L+ SA+ D+
Sbjct: 181 KVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDL 240
Query: 241 GSSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLI 300
G S H CIK GL DL+++T LI MY K + + IFD KDV+ WNC+I
Sbjct: 241 GDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMI 300
Query: 301 DNYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLV 360
D YA+ G+LE + L MK E KPNSST GLLS+CA +A G+ + + +EEE +
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIA 360
Query: 361 LDAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRM 420
LDA+LGTAL++MYAK G L+KA++IF ++KDKDVK+WT MI+GYGAHG ++A+ +M
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
Query: 421 EEDG--FRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRA 480
EE+ RPNE+ FL VLNACSHGG+V+EG+RCFKRMV Y TPK+EHYGC++DLLGRA
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480
Query: 481 GLLEEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLY 540
G LEEA+ LI++LP D T WRALLAACRVYG+ +LGESV L ++ + HP D++LL
Sbjct: 481 GQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLA 540
Query: 541 STYAIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEM 587
T+A+AG ++ + E + K +KEAG S IE+
Sbjct: 541 GTHAVAG-----NPEKSLDNE-------------LNKGRKEAGYSAIEI 571
BLAST of Sed0005385 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 345.5 bits (885), Expect = 8.4e-95
Identity = 192/579 (33.16%), Postives = 305/579 (52.68%), Query Frame = 0
Query: 32 LFLLKSCNRTSEISQIHCYMVKTALDLVPFTLSKLLASAILD-----IKYAASIFKDTQT 91
L LL +C + IH M+K L + LSKL+ IL + YA S+FK Q
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 92 PNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDFLPDEFSFITILKACARELALDVGWGV 151
PNL ++NTM RG++ D A ++ + + LP+ ++F +LK+CA+ A G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 152 HGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARKLFDELPQRN----------------- 211
HG V + G L +V+ L+ Y GR+ DA K+FD+ P R+
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 212 -------------DLVSWNTLMGGYLHASQPIVVLDIFRQMCRRGLIVGANTILTVSSAV 271
D+VSWN ++ GY L++F+ M + + +T++TV SA
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 272 GDVGSSLDGRSLHGQCIKFGLCFDLNVVTCLIDMYAKFNDLELGQMIFDEVAEKDVILWN 331
GS GR +H G +L +V LID+Y+K +LE +F+ + KDVI WN
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 332 CLIDNYARNGMLEIAIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEE- 391
LI Y + + A+ M G+ PN T+ +L ACA A+ G+++ Y+++
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 392 -EDLVLDAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIE 451
+ + + L T+LI+MYAKCG ++ A +F I K + +W MI G+ HG+ + +
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 452 TLYRMEEDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLL 511
RM + G +P+++ F+ +L+ACSH G++ G F+ M +Y MTPK+EHYGC+IDLL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 512 GRAGLLEEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSM 571
G +GL +EA +I + + D W +LL AC+++G+VELGES L+ + E+P +
Sbjct: 517 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 576
Query: 572 LLYSTYAIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIE 574
LL + YA AGR ++ + + + MK V S + I+
Sbjct: 577 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 615
BLAST of Sed0005385 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 327.8 bits (839), Expect = 1.8e-89
Identity = 179/530 (33.77%), Postives = 293/530 (55.28%), Query Frame = 0
Query: 34 LLKSCNRTSEISQIHCYMVKTALDLVPFTLSKLL--ASAILDIKYAASIFKDTQTPNLFM 93
L+ S +++ QIH ++ L F ++KL+ +S+ DI +A +F D P +F
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86
Query: 94 FNTMLRGYSNCPDSKQAFVVFNDLRNQDFLPDEFSFITILKACARELALDVGWGVHGIVH 153
+N ++RGYS + A +++++++ PD F+F +LKAC+ L +G VH V
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 154 RSGHGLFNHVYNILLHFYCSCGRIGDARKLFDELP-QRNDLVSWNTLMGGYLHASQPIVV 213
R G V N L+ Y C R+G AR +F+ LP +VSW ++ Y +P+
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 214 LDIFRQMCRRGLIVGANTILTVSSAVGDVGSSLDGRSLHGQCIKFGLCFDLNVVTCLIDM 273
L+IF QM + + +++V +A + GRS+H +K GL + +++ L M
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 274 YAKFNDLELGQMIFDEVAEKDVILWNCLIDNYARNGMLEIAIATLHLMKLEGKKPNSSTL 333
YAK + +++FD++ ++ILWN +I YA+NG AI H M + +P++ ++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 334 AGLLSACATFDAVSTGKYLGNYVEEEDLVLDAVLGTALINMYAKCGFLDKAIDIFCKIKD 393
+SACA ++ + + YV D D + +ALI+M+AKCG ++ A +F + D
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 394 KDVKTWTTMITGYGAHGQTKKAIETLYRMEEDGFRPNEVAFLAVLNACSHGGIVVEGLRC 453
+DV W+ MI GYG HG+ ++AI ME G PN+V FL +L AC+H G+V EG
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 454 FKRMVYEYGMTPKIEHYGCIIDLLGRAGLLEEAHNLIKSLPFKGDVTGWRALLAACRVYG 513
F RM ++ + P+ +HY C+IDLLGRAG L++A+ +IK +P + VT W ALL+AC+ +
Sbjct: 447 FNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 506
Query: 514 DVELGESVKRVLVDLNDEHPTDSMLLYSTYAIAGRLSDYTQDQKAEEEHK 561
VELGE + L ++ + + L + YA A RL D + + + K
Sbjct: 507 HVELGEYAAQQLFSIDPSNTGHYVQLSNLYA-AARLWDRVAEVRVRMKEK 554
BLAST of Sed0005385 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 321.2 bits (822), Expect = 1.7e-87
Identity = 183/597 (30.65%), Postives = 308/597 (51.59%), Query Frame = 0
Query: 31 LLFLLKSCNRTSEISQIHCYMVKTALDLVPFTLSKLLASAILD----IKYAASIFKDTQT 90
LL LL+ C + QI M+ L L PF S+L+A L + Y+ I K +
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 91 PNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQ---DFLPDEFSFITILKACARELALDVG 150
PN+F +N +RG+S + K++F+++ + + PD F++ + K CA +G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 151 WGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARKLFDELPQRNDLVSWNTLMGGYLH 210
+ G V + L +HV+N +H + SCG + +ARK+FDE P R DLVSWN L+ GY
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR-DLVSWNCLINGYKK 235
Query: 211 ASQPIVVLDIFRQMCRRGLIVGANTILTVSSAVGDVGSSLDGRSLHGQCIKFGLCFDLNV 270
+ + +++ M G+ T++ + S+ +G G+ + + GL + +
Sbjct: 236 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 295
Query: 271 VTCLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLIDNYARNGMLEI------------- 330
V L+DM++K D+ + IFD + ++ ++ W +I YAR G+L++
Sbjct: 296 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 355
Query: 331 ------------------AIATLHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNY 390
A+A M+ KP+ T+ LSAC+ A+ G ++ Y
Sbjct: 356 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 415
Query: 391 VEEEDLVLDAVLGTALINMYAKCGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKA 450
+E+ L L+ LGT+L++MYAKCG + +A+ +F I+ ++ T+T +I G HG A
Sbjct: 416 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 475
Query: 451 IETLYRMEEDGFRPNEVAFLAVLNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIID 510
I M + G P+E+ F+ +L+AC HGG++ G F +M + + P+++HY ++D
Sbjct: 476 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 535
Query: 511 LLGRAGLLEEAHNLIKSLPFKGDVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTD 570
LLGRAGLLEEA L++S+P + D W ALL CR++G+VELGE + L++L+ P+D
Sbjct: 536 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD---PSD 595
Query: 571 SMLLYSTYAIAGRLSDYTQDQKAEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEMNNL 590
S + + G + + ++A +GV +K G S IE+N +
Sbjct: 596 SGIYVLLDGMYGEANMWEDAKRARRMMNERGV-----------EKIPGCSSIEVNGI 637
BLAST of Sed0005385 vs. TAIR 10
Match:
AT3G15130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 318.9 bits (816), Expect = 8.4e-87
Identity = 181/572 (31.64%), Postives = 309/572 (54.02%), Query Frame = 0
Query: 24 VSSDDQNLLFLLKSCNR---TSEISQIHCYMVKTALDLVPFTLSKL--LASAILDIKYAA 83
+ + QNL+ +L+ C R + + Q+HCY++K+ L T + L + + A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 84 SIFKDTQTPNLFMFNTMLRGYSNCPDSKQAFVVFNDLRNQDFLPDEFSFITILKACAREL 143
+F N+ ++ ++ G+ D K + +F+++ Q P+EF+F T LKAC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 144 ALDVGWGVHGIVHRSGHGLFNHVYNILLHFYCSCGRIGDARKLFDELPQRNDLVSWNTLM 203
AL+ G +HG + G + V N L+ Y CGRI +A K+F + R+ L+SWN ++
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRS-LISWNAMI 181
Query: 204 GGYLHASQPIVVLDIFRQMCRRGLIVGAN--TILTVSSAVGDVGSSLDGRSLHGQCIKFG 263
G++HA LD F M + + T+ ++ A G G+ +HG ++ G
Sbjct: 182 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 241
Query: 264 L-CFDLNVVT-CLIDMYAKFNDLELGQMIFDEVAEKDVILWNCLIDNYARNGMLEIAIAT 323
C +T L+D+Y K L + FD++ EK +I W+ LI YA+ G A+
Sbjct: 242 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 301
Query: 324 LHLMKLEGKKPNSSTLAGLLSACATFDAVSTGKYLGNYVEEEDLVLDAVLGTALINMYAK 383
++ + +S L+ ++ A F + GK + + L+ + ++++MY K
Sbjct: 302 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 361
Query: 384 CGFLDKAIDIFCKIKDKDVKTWTTMITGYGAHGQTKKAIETLYRMEEDGFRPNEVAFLAV 443
CG +D+A F +++ KDV +WT +ITGYG HG KK++ Y M P+EV +LAV
Sbjct: 362 CGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAV 421
Query: 444 LNACSHGGIVVEGLRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLLEEAHNLIKSLPFKG 503
L+ACSH G++ EG F +++ +G+ P++EHY C++DLLGRAG L+EA +LI ++P K
Sbjct: 422 LSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKP 481
Query: 504 DVTGWRALLAACRVYGDVELGESVKRVLVDLNDEHPTDSMLLYSTYAIAGRLSDYTQDQK 563
+V W+ LL+ CRV+GD+ELG+ V ++L+ ++ ++P + +++ + Y AG + +
Sbjct: 482 NVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGY---WNEQGN 541
Query: 564 AEEEHKMKGVTRSSQMLIEKPKKEAGRSIIEM 587
A E +KG+ KKEAG S +E+
Sbjct: 542 ARELGNIKGL-----------KKEAGMSWVEI 558
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023542006.1 | 5.0e-299 | 86.25 | pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucurbita ... | [more] |
KAG6574062.1 | 2.7e-297 | 85.57 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022945629.1 | 7.9e-297 | 85.40 | pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucurbita ... | [more] |
KAG7013122.1 | 1.3e-296 | 85.40 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022968106.1 | 3.0e-296 | 85.06 | pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9ZVG8 | 4.7e-167 | 50.59 | Pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Arabidop... | [more] |
Q9LN01 | 1.2e-93 | 33.16 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9LTV8 | 2.5e-88 | 33.77 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Q9SJZ3 | 2.4e-86 | 30.65 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
P0C898 | 1.2e-85 | 31.64 | Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G1H6 | 3.8e-297 | 85.40 | pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Cucurbit... | [more] |
A0A6J1HTY2 | 1.5e-296 | 85.06 | pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Cucurbit... | [more] |
A0A6J1DA73 | 1.1e-288 | 83.02 | pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Momordic... | [more] |
A0A1S3CTA0 | 9.8e-261 | 76.06 | pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Cucumis ... | [more] |
A0A0A0KL36 | 7.8e-258 | 76.61 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168810 PE=4 SV=1 | [more] |