Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTCCTTCTCTGCAACAACAATGGCGGACGACGCCCAGACCTTCCCCTTAGCGCACTTTCAAGCTCAGAAATCCGACGAAGAGAAAAACCTCAAAACATTCCACGCTCTCCGGAAGGAGCGCTCCAACAAAGCCTTCATCTACGTCTTCGCCGCCATCGTCCTCCTCGCCGTCGCCGCCCTCCTCTTCGCCCTCCTCGTCCTCCGCGTCTCCTCCCCAACCATCCACCTCTCCGCCGTCTCCGTCGCCGGATTCTCCCTCCACCGCAACTCCTCTTCCCTCAACCTCACCCTCGCCGCTCGCTTCTCCGTCGACAACCCCAACTTCGGTCCCTTCCACTTCGACCACGCATCCGTCGGTTTCCTCCACGCCGGCGCCCTCGTCGGAGAGCGCACCACAGGCGGCGGGAGGGCGGCGGCGAAGGGCACGAAGGCGGTGGACGTCACGGTGGAAGGGTTTGCGAGGAACGTCAGCTCGGATTCGAGGGATTTGGGGGTTTTGAATCTGAGTGGGTTCGTGAAATTGCGAGGTGGGGTGAGGTTGATTCATGTTTTCAGGAAGAGGGTTTCGTCGGAGATTCGTTGTTCGGTGAATCTCGATTTGAATTCTCGTCGGATTCTGCCTGGTTGGGTTTGCGACTCACCGCATCCATGAACCCTAATTTGTTTATTCATTCTTTCAATTTTTTTTTAATTTTTTTTGGTATTAGTTTGAATTTTGTTATTCATTAAACAGATATTGGATTAGATGACTACAAACTTAGACAGATTTTAATATACTCTTTTATTATAACAAATATTTCATCATACCATTATGATAGTTGTTTCCTTTTTATTTGTGCACATTTATGTTGTAATGACACCTAAACGTCCTTATGTTTACTATTTAAGATTTGAGTTTTCTCAAGGGTATGTTTGAGGTATCTGTTTGATTATGATAGACGAA
mRNA sequence
CCTTCCTTCTCTGCAACAACAATGGCGGACGACGCCCAGACCTTCCCCTTAGCGCACTTTCAAGCTCAGAAATCCGACGAAGAGAAAAACCTCAAAACATTCCACGCTCTCCGGAAGGAGCGCTCCAACAAAGCCTTCATCTACGTCTTCGCCGCCATCGTCCTCCTCGCCGTCGCCGCCCTCCTCTTCGCCCTCCTCGTCCTCCGCGTCTCCTCCCCAACCATCCACCTCTCCGCCGTCTCCGTCGCCGGATTCTCCCTCCACCGCAACTCCTCTTCCCTCAACCTCACCCTCGCCGCTCGCTTCTCCGTCGACAACCCCAACTTCGGTCCCTTCCACTTCGACCACGCATCCGTCGGTTTCCTCCACGCCGGCGCCCTCGTCGGAGAGCGCACCACAGGCGGCGGGAGGGCGGCGGCGAAGGGCACGAAGGCGGTGGACGTCACGGTGGAAGGGTTTGCGAGGAACGTCAGCTCGGATTCGAGGGATTTGGGGGTTTTGAATCTGAGTGGGTTCGTGAAATTGCGAGGTGGGGTGAGGTTGATTCATGTTTTCAGGAAGAGGGTTTCGTCGGAGATTCGTTGTTCGGTGAATCTCGATTTGAATTCTCGTCGGATTCTGCCTGGTTGGGTTTGCGACTCACCGCATCCATGAACCCTAATTTGTTTATTCATTCTTTCAATTTTTTTTTAATTTTTTTTGGTATTAGTTTGAATTTTGTTATTCATTAAACAGATATTGGATTAGATGACTACAAACTTAGACAGATTTTAATATACTCTTTTATTATAACAAATATTTCATCATACCATTATGATAGTTGTTTCCTTTTTATTTGTGCACATTTATGTTGTAATGACACCTAAACGTCCTTATGTTTACTATTTAAGATTTGAGTTTTCTCAAGGGTATGTTTGAGGTATCTGTTTGATTATGATAGACGAA
Coding sequence (CDS)
ATGGCGGACGACGCCCAGACCTTCCCCTTAGCGCACTTTCAAGCTCAGAAATCCGACGAAGAGAAAAACCTCAAAACATTCCACGCTCTCCGGAAGGAGCGCTCCAACAAAGCCTTCATCTACGTCTTCGCCGCCATCGTCCTCCTCGCCGTCGCCGCCCTCCTCTTCGCCCTCCTCGTCCTCCGCGTCTCCTCCCCAACCATCCACCTCTCCGCCGTCTCCGTCGCCGGATTCTCCCTCCACCGCAACTCCTCTTCCCTCAACCTCACCCTCGCCGCTCGCTTCTCCGTCGACAACCCCAACTTCGGTCCCTTCCACTTCGACCACGCATCCGTCGGTTTCCTCCACGCCGGCGCCCTCGTCGGAGAGCGCACCACAGGCGGCGGGAGGGCGGCGGCGAAGGGCACGAAGGCGGTGGACGTCACGGTGGAAGGGTTTGCGAGGAACGTCAGCTCGGATTCGAGGGATTTGGGGGTTTTGAATCTGAGTGGGTTCGTGAAATTGCGAGGTGGGGTGAGGTTGATTCATGTTTTCAGGAAGAGGGTTTCGTCGGAGATTCGTTGTTCGGTGAATCTCGATTTGAATTCTCGTCGGATTCTGCCTGGTTGGGTTTGCGACTCACCGCATCCATGA
Protein sequence
MADDAQTFPLAHFQAQKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGFSLHRNSSSLNLTLAARFSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCSVNLDLNSRRILPGWVCDSPHP
Homology
BLAST of Sed0005358 vs. NCBI nr
Match:
XP_038875090.1 (late embryogenesis abundant protein At1g64065 [Benincasa hispida])
HSP 1 Score: 248.1 bits (632), Expect = 7.0e-62
Identity = 128/210 (60.95%), Postives = 170/210 (80.95%), Query Frame = 0
Query: 1 MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALL 60
M +D+Q+FPLAH+QA KSDEE+ L TF LRKERSNK FIYVF+ V L+VA L+FAL+
Sbjct: 1 MVEDSQSFPLAHYQAHHKSDEEQQLATFKTLRKERSNKCFIYVFSTFVFLSVAVLIFALI 60
Query: 61 VLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAARFSVDNPNFGPFHFDHASVGFLH 120
VLRV+SP+I LS+VS+ FS+ + +S SLNLT+ A F+VDN NFGPF+FD+ +VG ++
Sbjct: 61 VLRVNSPSIQLSSVSIPKFSITNANSSSPSLNLTMIAEFTVDNSNFGPFNFDNGTVGLMY 120
Query: 121 AGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIH 180
GA+VGE++TG GRA AKG+K ++VT+E A+N+SSDS +LG+LNL+ FVKLRG VRLIH
Sbjct: 121 GGAIVGEKSTGAGRAEAKGSKRMNVTMEASAKNISSDSNNLGILNLNSFVKLRGRVRLIH 180
Query: 181 VFRKRVSSEIRCSVNLDLNSRRILPGWVCD 207
+FR+R SSEI CS+NLD+N+ +I WVC+
Sbjct: 181 IFRRRTSSEITCSMNLDMNTHQIQYNWVCE 210
BLAST of Sed0005358 vs. NCBI nr
Match:
KAG6579535.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 241.5 bits (615), Expect = 6.5e-60
Identity = 130/212 (61.32%), Postives = 167/212 (78.77%), Query Frame = 0
Query: 1 MADDAQTFPLAHFQA-QKSDEE--KNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFA 60
M DD+Q+FP+AH+QA KSDEE ++L TF AL+KERSNK FIYVF+A V L+VA L+FA
Sbjct: 1 MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
Query: 61 LLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAARFSVDNPNFGPFHFDHASVGF 120
L+VLRV+SP +H S++SVA FSL + +S SLNLTL A+ +VDN NFGPF+FDHASVGF
Sbjct: 61 LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120
Query: 121 LHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRL 180
++AGA+VG+ TTG GR AKGTK ++VTV A+N+S+D + +LNLS F LRG VRL
Sbjct: 121 IYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
Query: 181 IHVFRKRVSSEIRCSVNLDLNSRRILPGWVCD 207
IH+FR+R SSEI CS+ LDLN+ +I WVC+
Sbjct: 181 IHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212
BLAST of Sed0005358 vs. NCBI nr
Match:
XP_022969774.1 (uncharacterized protein LOC111468875 [Cucurbita maxima])
HSP 1 Score: 239.6 bits (610), Expect = 2.5e-59
Identity = 129/212 (60.85%), Postives = 169/212 (79.72%), Query Frame = 0
Query: 1 MADDAQTFPLAHFQA-QKSDEE--KNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFA 60
MADD+Q+FP+AH++A KSDEE ++L TF AL+KERSNK FIYVF+A V L+VA L+FA
Sbjct: 1 MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
Query: 61 LLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAARFSVDNPNFGPFHFDHASVGF 120
L+VLRV+SP +H S++SVA FSL + +S SLNLT+ A+ +VDN NFGPF+FD+ASVGF
Sbjct: 61 LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120
Query: 121 LHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRL 180
++AGA+VG+ TTG GRA AKGTK ++VTV+ A N+S+D + +LNLS F LRG VRL
Sbjct: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180
Query: 181 IHVFRKRVSSEIRCSVNLDLNSRRILPGWVCD 207
IH+FR+R SSEI CS+ LDLN+ +I WVC+
Sbjct: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWVCE 212
BLAST of Sed0005358 vs. NCBI nr
Match:
XP_008437349.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo])
HSP 1 Score: 233.0 bits (593), Expect = 2.3e-57
Identity = 129/212 (60.85%), Postives = 167/212 (78.77%), Query Frame = 0
Query: 1 MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALL 60
M +D+Q+FPLAH+QA K+DEE+ L TF L KERSNK FIY+F+ V L+VA L+FAL+
Sbjct: 1 MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
Query: 61 VLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAARFSVDNPNFGPFHFDHASVGF 120
VLRV+SP+I+LSAVS+ FSL NSS SL+L+ +A F+VDN NFGPF+FD+ +VG
Sbjct: 61 VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
Query: 121 LHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRL 180
++ G + GER+TGGGRA AKG+K ++VTVEG A+NVS + G+L+LS FVKLRG VRL
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSN---GILSLSSFVKLRGRVRL 180
Query: 181 IHVFRKRVSSEIRCSVNLDLNSRRILPGWVCD 207
IHVFR+RVSSEI CS+NLDLN+ +I WVC+
Sbjct: 181 IHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209
BLAST of Sed0005358 vs. NCBI nr
Match:
KAA0042716.1 (late embryogenesis abundant protein [Cucumis melo var. makuwa])
HSP 1 Score: 231.9 bits (590), Expect = 5.2e-57
Identity = 129/212 (60.85%), Postives = 166/212 (78.30%), Query Frame = 0
Query: 1 MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALL 60
M +D+Q+FPLAH+QA K+DEE+ L TF L KERSNK FIY+F+ V L+VA L+FAL+
Sbjct: 1 MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
Query: 61 VLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAARFSVDNPNFGPFHFDHASVGF 120
VLRV+SP+I+LSAVS+ FSL NSS SL+L+ +A F VDN NFGPF+FD+ +VG
Sbjct: 61 VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTVGL 120
Query: 121 LHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRL 180
++ G + GER+TGGGRA AKG+K ++VTVEG A+NVS + G+L+LS FVKLRG VRL
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSN---GILSLSSFVKLRGRVRL 180
Query: 181 IHVFRKRVSSEIRCSVNLDLNSRRILPGWVCD 207
IHVFR+RVSSEI CS+NLDLN+ +I WVC+
Sbjct: 181 IHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209
BLAST of Sed0005358 vs. ExPASy TrEMBL
Match:
A0A6J1I3M2 (uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875 PE=4 SV=1)
HSP 1 Score: 239.6 bits (610), Expect = 1.2e-59
Identity = 129/212 (60.85%), Postives = 169/212 (79.72%), Query Frame = 0
Query: 1 MADDAQTFPLAHFQA-QKSDEE--KNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFA 60
MADD+Q+FP+AH++A KSDEE ++L TF AL+KERSNK FIYVF+A V L+VA L+FA
Sbjct: 1 MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60
Query: 61 LLVLRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAARFSVDNPNFGPFHFDHASVGF 120
L+VLRV+SP +H S++SVA FSL + +S SLNLT+ A+ +VDN NFGPF+FD+ASVGF
Sbjct: 61 LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120
Query: 121 LHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRL 180
++AGA+VG+ TTG GRA AKGTK ++VTV+ A N+S+D + +LNLS F LRG VRL
Sbjct: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180
Query: 181 IHVFRKRVSSEIRCSVNLDLNSRRILPGWVCD 207
IH+FR+R SSEI CS+ LDLN+ +I WVC+
Sbjct: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWVCE 212
BLAST of Sed0005358 vs. ExPASy TrEMBL
Match:
A0A1S3ATY3 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482793 PE=4 SV=1)
HSP 1 Score: 233.0 bits (593), Expect = 1.1e-57
Identity = 129/212 (60.85%), Postives = 167/212 (78.77%), Query Frame = 0
Query: 1 MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALL 60
M +D+Q+FPLAH+QA K+DEE+ L TF L KERSNK FIY+F+ V L+VA L+FAL+
Sbjct: 1 MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
Query: 61 VLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAARFSVDNPNFGPFHFDHASVGF 120
VLRV+SP+I+LSAVS+ FSL NSS SL+L+ +A F+VDN NFGPF+FD+ +VG
Sbjct: 61 VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
Query: 121 LHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRL 180
++ G + GER+TGGGRA AKG+K ++VTVEG A+NVS + G+L+LS FVKLRG VRL
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSN---GILSLSSFVKLRGRVRL 180
Query: 181 IHVFRKRVSSEIRCSVNLDLNSRRILPGWVCD 207
IHVFR+RVSSEI CS+NLDLN+ +I WVC+
Sbjct: 181 IHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209
BLAST of Sed0005358 vs. ExPASy TrEMBL
Match:
A0A5A7TL68 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002140 PE=4 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 2.5e-57
Identity = 129/212 (60.85%), Postives = 166/212 (78.30%), Query Frame = 0
Query: 1 MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALL 60
M +D+Q+FPLAH+QA K+DEE+ L TF L KERSNK FIY+F+ V L+VA L+FAL+
Sbjct: 1 MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
Query: 61 VLRVSSPTIHLSAVSVAGFSLH--RNSS---SLNLTLAARFSVDNPNFGPFHFDHASVGF 120
VLRV+SP+I+LSAVS+ FSL NSS SL+L+ +A F VDN NFGPF+FD+ +VG
Sbjct: 61 VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTVGL 120
Query: 121 LHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRL 180
++ G + GER+TGGGRA AKG+K ++VTVEG A+NVS + G+L+LS FVKLRG VRL
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSN---GILSLSSFVKLRGRVRL 180
Query: 181 IHVFRKRVSSEIRCSVNLDLNSRRILPGWVCD 207
IHVFR+RVSSEI CS+NLDLN+ +I WVC+
Sbjct: 181 IHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209
BLAST of Sed0005358 vs. ExPASy TrEMBL
Match:
A0A0A0KQT7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 SV=1)
HSP 1 Score: 228.8 bits (582), Expect = 2.1e-56
Identity = 124/212 (58.49%), Postives = 162/212 (76.42%), Query Frame = 0
Query: 1 MADDAQTFPLAHFQA-QKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALL 60
M +D+Q+FPLAH+QA K +EE+ L TF LRKERSNK FIY+F+ V L+VA L+FAL+
Sbjct: 1 MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60
Query: 61 VLRVSSPTIHLSAVSVAGFSLHRNS-----SSLNLTLAARFSVDNPNFGPFHFDHASVGF 120
VLRV+SP+I LS++S SL N+ +SLNL+ A F+VDN NFGPF+FD+ +VG
Sbjct: 61 VLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTVGL 120
Query: 121 LHAGALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRL 180
++ G + GER+TGGGRA AKG+K ++VTVEG A+NVS + G+LN S FVKLRG VRL
Sbjct: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSN---GILNFSSFVKLRGRVRL 180
Query: 181 IHVFRKRVSSEIRCSVNLDLNSRRILPGWVCD 207
IH+FR+RVSSEI CS+NLDLN+ +I WVC+
Sbjct: 181 IHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209
BLAST of Sed0005358 vs. ExPASy TrEMBL
Match:
A0A6J1H2C0 (uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC111459739 PE=4 SV=1)
HSP 1 Score: 205.7 bits (522), Expect = 1.9e-49
Identity = 112/212 (52.83%), Postives = 146/212 (68.87%), Query Frame = 0
Query: 1 MADDAQTFPLAHFQAQKSDEEKNLKTFHALRKERSNKAFIYVFAAIVLLAVAALLFALLV 60
M + + +FPL H QA + E SNK FIY+F++ V L VA L+F+L+V
Sbjct: 1 MGEHSHSFPLPHSQAHHKTP----------KNEPSNKCFIYIFSSFVFLCVALLIFSLIV 60
Query: 61 LRVSSPTIHLSAVSVAGFSL---HRNSSSLNLTLAARFSVDNPNFGPFHFDHASVGFLHA 120
LRV+SPTI LS++SV FS+ + +SSSLNLTL A FS+DN NFGPF FD+ +V F++
Sbjct: 61 LRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVFMYG 120
Query: 121 GALVGERTTGGGRAAAKGTKAVDVTVEGFARNVSSDSRDLGVLNLSGFVKLRGGVRLIHV 180
G +VGER+TGGGRA AKGT ++V+VE NVSSD G+LN+S F K G + LIHV
Sbjct: 121 GVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHV 180
Query: 181 FRKRVSSEIRCSVNLDLNSRRILPGWVCDSPH 210
RKR+ SEI CS+NLDLN+ +I P WVCD+ H
Sbjct: 181 LRKRIWSEISCSINLDLNTHQIQPRWVCDTQH 202
BLAST of Sed0005358 vs. TAIR 10
Match:
AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )
HSP 1 Score: 63.5 bits (153), Expect = 2.3e-10
Identity = 52/190 (27.37%), Postives = 96/190 (50.53%), Query Frame = 0
Query: 20 EEKNLKTFHALRKERSNKAFI-YVFAAIVLLAVAALLFALLVLRVSSPTIHLSAVSVAGF 79
+ N T LR++R+ K I + I+L+A+ ++ A + + PT + +V+V
Sbjct: 35 QSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRL 94
Query: 80 SLHRN----SSSLNLTLAARFSVDNPNFGPFHFDHASVGFLHAGALVGERTTGGGRAAAK 139
N LNLTL S+ NPN F +D +S + G ++GE R AA+
Sbjct: 95 QASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAAR 154
Query: 140 GTKAVDVTVEGFARNVSSDSRDL-----GVLNLSGFVKLRGGVRLIHVFRKRVSSEIRCS 199
T +++T+ A + S+++ L GV+ L+ FVK+ G V ++ +F+ +V S C
Sbjct: 155 KTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCD 214
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038875090.1 | 7.0e-62 | 60.95 | late embryogenesis abundant protein At1g64065 [Benincasa hispida] | [more] |
KAG6579535.1 | 6.5e-60 | 61.32 | Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro... | [more] |
XP_022969774.1 | 2.5e-59 | 60.85 | uncharacterized protein LOC111468875 [Cucurbita maxima] | [more] |
XP_008437349.1 | 2.3e-57 | 60.85 | PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] | [more] |
KAA0042716.1 | 5.2e-57 | 60.85 | late embryogenesis abundant protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1I3M2 | 1.2e-59 | 60.85 | uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875... | [more] |
A0A1S3ATY3 | 1.1e-57 | 60.85 | late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034... | [more] |
A0A5A7TL68 | 2.5e-57 | 60.85 | Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
A0A0A0KQT7 | 2.1e-56 | 58.49 | LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 ... | [more] |
A0A6J1H2C0 | 1.9e-49 | 52.83 | uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC1114597... | [more] |
Match Name | E-value | Identity | Description | |
AT3G54200.1 | 2.3e-10 | 27.37 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | [more] |