Sed0005329 (gene) Chayote v1

Overview


Name	Sed0005329
Type	gene
Organism	Sechium edule (Chayote v1)
Description	17.4 kDa class I heat shock protein-like
Location	LG11: 35562798 .. 35563373 (-)
RNA-Seq Expression	Sed0005329
Synteny	Sed0005329

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGATCCCAAGCTTCCTCAGCGGCCGCCGGAGCAATGTGTTCGATCCATTCTCTCTGGACATTTGGGATCCAGTAGAGGGGTTTCATTTCCCAGGGACAATGGCAAACGTCCCCTCCGGCAGCGGCGAAGCGACCGCGATTGCGAACGCCCGAATCGACTGGAGAGACACGGCGGAGGCGCATATATTCAAGGCGGATCTGCCGGGGTTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGGAAGGGAGGGTTTTGCAGATTAGTGGAGAAAGGAGCAGAGAAGAGGAACAAAGAAGTGAGAAGTGGCACAGAGTGGAGCGGAGCTCGGGGAAGTTTATGCGGCGGTTTCGGTTGCCGGAGAATGCCAAGATGGAGGAGATTAAGGCCAATATGGAGAATGGGGTTTTGACGATCCTGGTTCCCAAACAGGAGGAGAGGAAGCCACCGGTGAAGGCCATTGATATTGCCGGTTGATGCTTTGTGTCTGTATTTTGTGCTCTGTTTTTGGAGCACCGTTTGTGTTTTGGTATTTTGTTTCATGGTACCCTTTGAACTTTACTTATGTTTGTG

mRNA sequence

ATGTCGATGATCCCAAGCTTCCTCAGCGGCCGCCGGAGCAATGTGTTCGATCCATTCTCTCTGGACATTTGGGATCCAGTAGAGGGGTTTCATTTCCCAGGGACAATGGCAAACGTCCCCTCCGGCAGCGGCGAAGCGACCGCGATTGCGAACGCCCGAATCGACTGGAGAGACACGGCGGAGGCGCATATATTCAAGGCGGATCTGCCGGGGTTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGGAAGGGAGGGTTTTGCAGATTAGTGGAGAAAGGAGCAGAGAAGAGGAACAAAGAAGTGAGAAGTGGCACAGAGTGGAGCGGAGCTCGGGGAAGTTTATGCGGCGGTTTCGGTTGCCGGAGAATGCCAAGATGGAGGAGATTAAGGCCAATATGGAGAATGGGGTTTTGACGATCCTGGTTCCCAAACAGGAGGAGAGGAAGCCACCGGTGAAGGCCATTGATATTGCCGGTTGATGCTTTGTGTCTGTATTTTGTGCTCTGTTTTTGGAGCACCGTTTGTGTTTTGGTATTTTGTTTCATGGTACCCTTTGAACTTTACTTATGTTTGTG

Coding sequence (CDS)

ATGTCGATGATCCCAAGCTTCCTCAGCGGCCGCCGGAGCAATGTGTTCGATCCATTCTCTCTGGACATTTGGGATCCAGTAGAGGGGTTTCATTTCCCAGGGACAATGGCAAACGTCCCCTCCGGCAGCGGCGAAGCGACCGCGATTGCGAACGCCCGAATCGACTGGAGAGACACGGCGGAGGCGCATATATTCAAGGCGGATCTGCCGGGGTTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGGAAGGGAGGGTTTTGCAGATTAGTGGAGAAAGGAGCAGAGAAGAGGAACAAAGAAGTGAGAAGTGGCACAGAGTGGAGCGGAGCTCGGGGAAGTTTATGCGGCGGTTTCGGTTGCCGGAGAATGCCAAGATGGAGGAGATTAAGGCCAATATGGAGAATGGGGTTTTGACGATCCTGGTTCCCAAACAGGAGGAGAGGAAGCCACCGGTGAAGGCCATTGATATTGCCGGTTGA

Protein sequence

MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTAEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRLPENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG

Homology

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BLAST of Sed0005329 vs. NCBI nr
Match: XP_023550896.1 (17.6 kDa class I heat shock protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.9 bits (694), Expect = 3.4e-69
Identity = 136/160 (85.00%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVP-SGSGEATAIANARIDWRDT 60
           MS+IPSFLSGRR+NVFDPFSLDIWDP+EG  FPG++A VP SG+GE TAIAN RIDWR+T
Sbjct: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLAKVPSSGAGETTAIANTRIDWRET 60

Query: 61  AEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFR 120
            EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERS+EEE+R+EKWHRVERS GKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           LPENAKM+EI A MENGVLT+ VPKQEERKP VKAIDIAG
Sbjct: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 160

[Close]

BLAST of Sed0005329 vs. NCBI nr
Match: XP_022939316.1 (17.4 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6578434.1 17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.4 bits (690), Expect = 9.9e-69
Identity = 135/160 (84.38%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVP-SGSGEATAIANARIDWRDT 60
           MS+IPSFLSGRR+NVFDPFSLDIWDP+EG  FPG++  VP SG+GE TAIAN RIDWR+T
Sbjct: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60

Query: 61  AEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFR 120
            EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERS+EEE+R+EKWHRVERS GKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           LPENAKM+EI A MENGVLT+ VPKQEERKP VKAIDIAG
Sbjct: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 160

[Close]

BLAST of Sed0005329 vs. NCBI nr
Match: XP_022993074.1 (17.6 kDa class I heat shock protein 3-like [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 3.8e-68
Identity = 133/160 (83.12%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPS-GSGEATAIANARIDWRDT 60
           MS+IPSF SGRR++VFDPFSLDIWDP+EG  FPG++A VPS G+GE TAIAN RIDWR+T
Sbjct: 1   MSLIPSFFSGRRTDVFDPFSLDIWDPLEGMQFPGSLAKVPSFGTGETTAIANTRIDWRET 60

Query: 61  AEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFR 120
            EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERS+E+E+R+EKWHRVERS GKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEDEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           LPENAKM+EI A MENGVLT++VPKQEERKP VKAIDIAG
Sbjct: 121 LPENAKMDEINAKMENGVLTVMVPKQEERKPEVKAIDIAG 160

[Close]

BLAST of Sed0005329 vs. NCBI nr
Match: XP_038886219.1 (17.3 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 134/159 (84.28%), Postives = 145/159 (91.19%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MS+IPSF SGRRSNVFDP SLDIWDP+E   FPGT+AN PS SGE TAIAN RIDW++T 
Sbjct: 1   MSLIPSFFSGRRSNVFDPLSLDIWDPLEMMQFPGTLANTPS-SGETTAIANTRIDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAHI KADLPGLKKEEVKVEVEEGRV+QISGERS+EEE+R+EKWHRVERS GKFMRRFRL
Sbjct: 61  EAHILKADLPGLKKEEVKVEVEEGRVVQISGERSKEEEERNEKWHRVERSMGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAKM+EIKANMENGVLT+ VPKQEERKP VKAIDIAG
Sbjct: 121 PENAKMDEIKANMENGVLTVTVPKQEERKPQVKAIDIAG 158

[Close]

BLAST of Sed0005329 vs. NCBI nr
Match: XP_008441421.1 (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo] >KAA0041488.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK24362.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 256.5 bits (654), Expect = 1.5e-64
Identity = 130/159 (81.76%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MSMIPSF SGRRSNVFDPFSL++WDP EG  FP T       SGE +AIAN RIDWR+T 
Sbjct: 1   MSMIPSFFSGRRSNVFDPFSLELWDPSEGMQFPPT-------SGETSAIANTRIDWRETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERS+EEE+R+EKWHRVERS GKFMRRFRL
Sbjct: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAKM+EIKANMENGVLT++VPKQE R+P VKAIDIAG
Sbjct: 121 PENAKMDEIKANMENGVLTVMVPKQEARRPQVKAIDIAG 152

[Close]

BLAST of Sed0005329 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-59
Identity = 110/159 (69.18%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MS+IPS   GRRSNVFDPFS D+WDP EGF  P +     S + +  A  NAR+DW++T 
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPGLKKEEVKVEVE+  VLQISGERS+E E++++KWHRVER+SGKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAKMEE+KA MENGVLT++VPK  E+KP VK+IDI+G
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Sed0005329 vs. ExPASy Swiss-Prot
Match: P19036 (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 7.4e-59
Identity = 109/159 (68.55%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MS++PSF  GRR+NVFDPFSLD+WDP EGF  PG + N P  + +  A  NA++DWR+T 
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPG-LTNAP--AKDVAAFTNAKVDWRETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAH+FKAD+PGLKKEEVKVEVE+G +LQISGERS E E++S+ WHRVERSSGKFMRRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAK+EE+KA+MENGVL++ VPK +E KP VK++DI+G
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Sed0005329 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 226.5 bits (576), Expect = 2.2e-58
Identity = 110/159 (69.18%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MS+IPS   GRR+NVFDPFSLD++DP EGF  P  +AN P  + +  A  NA++DWR+T 
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPGL+KEEVKVEVE+G +LQISGERS E E++++KWHRVERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAKMEEIKA+MENGVL++ VPK  E+KP VK+IDI+G
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Sed0005329 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.1e-57
Identity = 105/161 (65.22%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTM--ANVPSGSGEATAIANARIDWRD 60
           MS+IP+F  GRR+NVFDPFSLD+WDP + F FP T+  A+ P  S E +A  + R+DW++
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TAEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRF 120
           T EAH+FKAD+PGLKKEEVKV++E+ +VLQISGER+ E+E +++ WHRVERSSGKFMRRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           RLPENAK+E++KA+MENGVLT+ VPK+E +KP VKAI+I+G
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of Sed0005329 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.0e-56
Identity = 104/159 (65.41%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MS+IPS   GRRSNVFDPFSLD+WDP + FHFP ++      S E +A  N R+DW++T 
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSL------SAENSAFVNTRVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAH+F+AD+PGLKKEEVKV++E+ RVLQISGER+ E+E +++ WHRVERSSG FMRRFRL
Sbjct: 61  EAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAK+E++KA+MENGVLT+ VPK+E +KP VKAI+I+G
Sbjct: 121 PENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

[Close]

BLAST of Sed0005329 vs. ExPASy TrEMBL
Match: A0A6J1FFJ4 (17.4 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111445270 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.8e-69
Identity = 135/160 (84.38%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVP-SGSGEATAIANARIDWRDT 60
           MS+IPSFLSGRR+NVFDPFSLDIWDP+EG  FPG++  VP SG+GE TAIAN RIDWR+T
Sbjct: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60

Query: 61  AEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFR 120
            EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERS+EEE+R+EKWHRVERS GKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           LPENAKM+EI A MENGVLT+ VPKQEERKP VKAIDIAG
Sbjct: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 160

[Close]

BLAST of Sed0005329 vs. ExPASy TrEMBL
Match: A0A6J1JZ77 (17.6 kDa class I heat shock protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489198 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.8e-68
Identity = 133/160 (83.12%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPS-GSGEATAIANARIDWRDT 60
           MS+IPSF SGRR++VFDPFSLDIWDP+EG  FPG++A VPS G+GE TAIAN RIDWR+T
Sbjct: 1   MSLIPSFFSGRRTDVFDPFSLDIWDPLEGMQFPGSLAKVPSFGTGETTAIANTRIDWRET 60

Query: 61  AEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFR 120
            EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERS+E+E+R+EKWHRVERS GKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEDEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           LPENAKM+EI A MENGVLT++VPKQEERKP VKAIDIAG
Sbjct: 121 LPENAKMDEINAKMENGVLTVMVPKQEERKPEVKAIDIAG 160

[Close]

BLAST of Sed0005329 vs. ExPASy TrEMBL
Match: A0A5D3DLG8 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001440 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.2e-65
Identity = 130/159 (81.76%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MSMIPSF SGRRSNVFDPFSL++WDP EG  FP T       SGE +AIAN RIDWR+T 
Sbjct: 1   MSMIPSFFSGRRSNVFDPFSLELWDPSEGMQFPPT-------SGETSAIANTRIDWRETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERS+EEE+R+EKWHRVERS GKFMRRFRL
Sbjct: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAKM+EIKANMENGVLT++VPKQE R+P VKAIDIAG
Sbjct: 121 PENAKMDEIKANMENGVLTVMVPKQEARRPQVKAIDIAG 152

[Close]

BLAST of Sed0005329 vs. ExPASy TrEMBL
Match: A0A0A0KD99 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009400 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.2e-65
Identity = 129/159 (81.13%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MS+IPSF SGRRSNVFDPFSL+IWDP+EG  FP T       SGE  AIAN RIDWR+T 
Sbjct: 1   MSLIPSFFSGRRSNVFDPFSLEIWDPIEGMQFPQT-------SGETAAIANTRIDWRETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERS+EE++R+EKWHRVERS GKFMRRFRL
Sbjct: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEDERNEKWHRVERSMGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAKM+EIKANMENGVLT++VPKQE R+P VKAIDIAG
Sbjct: 121 PENAKMDEIKANMENGVLTVMVPKQEARRPQVKAIDIAG 152

[Close]

BLAST of Sed0005329 vs. ExPASy TrEMBL
Match: A0A1S3B456 (17.8 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103485543 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.2e-65
Identity = 130/159 (81.76%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MSMIPSF SGRRSNVFDPFSL++WDP EG  FP T       SGE +AIAN RIDWR+T 
Sbjct: 1   MSMIPSFFSGRRSNVFDPFSLELWDPSEGMQFPPT-------SGETSAIANTRIDWRETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERS+EEE+R+EKWHRVERS GKFMRRFRL
Sbjct: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAKM+EIKANMENGVLT++VPKQE R+P VKAIDIAG
Sbjct: 121 PENAKMDEIKANMENGVLTVMVPKQEARRPQVKAIDIAG 152

[Close]

BLAST of Sed0005329 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 228.4 bits (581), Expect = 4.0e-60
Identity = 110/159 (69.18%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MS+IPS   GRRSNVFDPFS D+WDP EGF  P +     S + +  A  NAR+DW++T 
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPGLKKEEVKVEVE+  VLQISGERS+E E++++KWHRVER+SGKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAKMEE+KA MENGVLT++VPK  E+KP VK+IDI+G
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Sed0005329 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 228.0 bits (580), Expect = 5.3e-60
Identity = 109/159 (68.55%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MS++PSF  GRR+NVFDPFSLD+WDP EGF  PG + N P  + +  A  NA++DWR+T 
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPG-LTNAP--AKDVAAFTNAKVDWRETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAH+FKAD+PGLKKEEVKVEVE+G +LQISGERS E E++S+ WHRVERSSGKFMRRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAK+EE+KA+MENGVL++ VPK +E KP VK++DI+G
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Sed0005329 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 226.5 bits (576), Expect = 1.5e-59
Identity = 110/159 (69.18%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 1   MSMIPSFLSGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDTA 60
           MS+IPS   GRR+NVFDPFSLD++DP EGF  P  +AN P  + +  A  NA++DWR+T 
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPGL+KEEVKVEVE+G +LQISGERS E E++++KWHRVERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           PENAKMEEIKA+MENGVL++ VPK  E+KP VK+IDI+G
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Sed0005329 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-51
Identity = 101/163 (61.96%), Postives = 132/163 (80.98%), Query Frame = 0


Query: 1   MSMIPSFL-SGRRSN-VFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRD 60
           MS+IPSF  + RRSN +FDPFSLD+WDP +   FP ++      SGE +AI NAR+DW++
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSL------SGETSAITNARVDWKE 60

Query: 61  TAEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRF 120
           TAEAH+FKADLPG+KKEEVKVE+E+  VL+ISGER  E+E++ + WHRVERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 121 RLPENAKMEEIKANMENGVLTILVPKQEE--RKPPVKAIDIAG 160
           +LPEN KM+++KA+MENGVLT+ VPK EE  +K  VK+IDI+G
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of Sed0005329 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.3e-50
Identity = 102/160 (63.75%), Postives = 124/160 (77.50%), Query Frame = 0


Query: 1   MSMIPSFL-SGRRSNVFDPFSLDIWDPVEGFHFPGTMANVPSGSGEATAIANARIDWRDT 60
           MSMIPSF  + RRSN+FDPFSLD+WDP +            S S E +AI NAR+DWR+T
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKEL-------TSSSLSRENSAIVNARVDWRET 60

Query: 61  AEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSREEEQRSEKWHRVERSSGKFMRRFR 120
            EAH+FKADLPGLKKEEVKVE+EE  VL+ISGER  E+E +++ WHRVERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTILVPKQEERKPPVKAIDIAG 160
           LPEN KM+++KA MENGVLT+ VPK E +K  VK+I I+G
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

The following BLAST results are available for this feature:

BLAST of Sed0005329 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550896.1	3.4e-69	85.00	17.6 kDa class I heat shock protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939316.1	9.9e-69	84.38	17.4 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6578434.1 17.6...	[more]
XP_022993074.1	3.8e-68	83.13	17.6 kDa class I heat shock protein 3-like [Cucurbita maxima]	[more]
XP_038886219.1	1.1e-67	84.28	17.3 kDa class I heat shock protein-like [Benincasa hispida]	[more]
XP_008441421.1	1.5e-64	81.76	PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo] >KAA0041488.1...	[more]

BLAST of Sed0005329 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19037	5.7e-59	69.18	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P19036	7.4e-59	68.55	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A ...	[more]
P13853	2.2e-58	69.18	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P05478	4.1e-57	65.22	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P04793	2.0e-56	65.41	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]

BLAST of Sed0005329 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFJ4	4.8e-69	84.38	17.4 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JZ77	1.8e-68	83.13	17.6 kDa class I heat shock protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5D3DLG8	7.2e-65	81.76	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0KD99	7.2e-65	81.13	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009400 PE=3 S...	[more]
A0A1S3B456	7.2e-65	81.76	17.8 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103485543...	[more]

BLAST of Sed0005329 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	4.0e-60	69.18	heat shock protein 18.2	[more]
AT3G46230.1	5.3e-60	68.55	heat shock protein 17.4	[more]
AT1G53540.1	1.5e-59	69.18	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	1.5e-51	61.96	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	1.3e-50	63.75	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..159 e-value: 1.2E-48 score: 166.6
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 30..158
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 55..157 e-value: 1.1E-29 score: 102.5
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 45..159 score: 30.617298
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..159
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..159
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 53..144 e-value: 2.83855E-45 score: 141.674

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005329.1	Sed0005329.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding