Sed0005177 (gene) Chayote v1

Overview


Name	Sed0005177
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CLP protease regulatory subunit CLPX1
Location	LG13: 370697 .. 380671 (+)
RNA-Seq Expression	Sed0005177
Synteny	Sed0005177

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATGCTCCAAATAAGATATTCATTCAATCTTGAAGGCATAGTTGCGTAATTTTCTCAAAGGTTCTGCCGTCGTCTACTAGAGAGATTGATAATCTCTGTTTCTTCATCTTCTTCTTCTTCTTCTTCAATTTCCTTCCAATTTTCCCAATCCCCATTTACAGTTCCCTCCATGACCTAATTCCTAAAGCCCTTATCTCCTTCCTTCCTTTTCATTTCTCAATATACTTCTTTCAGCCATGGCCGCCGCCGCCGCCGCCCTCCGCTCAAGGTCCTCCATGGAAGCTGCCTGTTTAGCTGTTTCTCGTTGCCGCCGCCACTGTATTCCCAGTTATACTCGCGCTGCTACCAAACCCAACTCCCACTCCACGAACCCTAACAATCACTTGGTCTCATTCCGGCCGCTCAACGGTAGTCGGTCTTCCGATCATCGGAGGGTTTCCCCTAATTCTAACAACAGCTTGAATGGGAGCTTCAGCTGGGGCGATCGTCTTATGAGCACTTACGGGGACCCACCTGAGGTTTGGTCTGGTGATGGGATTGTGATTCGTGGGACCAATTCGAGCTTGAATGGTCGTGAAGGCGGCACTGGCGGCGGCGGTGGTGCTAACTCTGGTTCTGGTGGTGGGTTTGGCTCGAATTCGAATGATGGGTGCTGGGGTGGTTCCAGTTTGGGACCTAATTTTCCAACCCCGAAGGAAATCTCCAAGGGGCTTGATAAGTTTGTGATTGGTCAGGAGAAAGCTAAAAAGGTAAGCTTGTTTGTAGCTCGACATCCCGGACTTGGGAATACAAGAGGTTATAGACTCAATTCATAGCCACATATCTAGTAAATAATTTCTTACGTGTTTATTTGAAATCCAAATGTTATAGAATAAGGTGGTGAGTGTAGTTCATGTGATGGATATTAAAAGAAAAGAAAGAAAAAATAAATTCTTTTTATTGTCTGAAGAGTGTGCTGGTCTCTCTTGCAGGTGCTCTCTGTGGGTGTTTACAATCACTACAAGCGTATCTATCATGAATCCTTACAAAGGTTATTGAATTTGAATGTTATATACCTCCTGAAATTGCGTATATTTTTTCCCCTTGACTTTAAGTATAGTCGAGTTAATATTATGGGATGGCTAGAAATGTGGTCAATGGTTTTAGTTAGAAATTAAAAATCACAACCAGTGTATCTATCGACGTAGTTTTCTTATTTTGTGGAGTGTGTGGGAAGTTTGATTGCTATAATTTGGCAGCTAACATAGTTCTTAAGATTACTCTCAAAACATACACAGATAGTGTATACACATATCCTAATGCCTGTACTTGGACCATTGCAAGTTATGTAGCCTAAAACCTGCAGAGCCTTGTTTTACCAGTTTGTTTTCTTGCTATCATGAAAAAAAAGAATACACTTATTTGGACTGTGAAATTGGGCTCGCAACTTGAGTTCAATATTGAGGGAATCCAGTTTCATTACAATTTTACAAGATGGTCTCAATGTGCTCTTTATTTTTTGAGTGACTGTCGAGCATCGTTGTTTTAAATACGTATGGGGTAGTAAGTTCTATATGATCCGAGAATATATGGTTTCTTTCCTTCCTTTCAATACAAGAAGCTGAGTGTATATTCCCTTTTGGATATAGCAATACATGCTATGGATATTCTATTTGGATGGATGATTGGTTTCTTTCTCTTGCATACACTCACCAGGGATGTTCATTCTATAGTGTAAAGATATTGGGGACCTTAAAATGTTTTGTTTTTCTTGTGCAAGCTAGGCCCTCAGGAGATGCTGTTAACAACAAAGCTGATGCCGTTGATGATGATAAAGTAGAACTTGAAAAAAGTAACATCCTTCTGATGGGGCCAACAGGCTCAGGTAATTTATTCTATGTGTCTGTTGTGTGCATTACAGGTTAGTTTTGTGGTCATTGTAATGAAGTTCAATAATCACATCTTTGGGGATTTTATTTTTCATAACTGATAACTTGGAGTAAGGATATGTCCAAAGCAATTTAGAGATTTGTTCAATATCTTTTCTATAAATTTCCAATGCCAAGGCCCTGCTTCGTATGAAAGGAATGGTGTCTTTAATATTCTAGGAAGCGGTAAAAATATGTTTTTGTAAAAGAGCAAGTACAACTTAGGGGTTGGGGTTGAGAAAACCCCTCCCAAAAACTAGACTAAAAGAGTCTGCCTGTCACTTGTGATCCAAATTCCAAACTATTAAGGCGTGAGGCGAGGGGACCCAGGGTTGTGCTGCTCGTATGCTGCCCACGCAAGGGACTTCAATCAGACGAGTGCCTTGTTGCGCCTATCAGTGCCTGGCAGCGTCTTCGCCATTGTCAAAGTCCAACACCAAAGACAATTCACAAGTTTTTCTAAATTAATTCACAAAATGCTTAGATTACGTAAAAACCTAAAAGTTAGCCCCCAAGGAAAGTCCACAAAAGCCATACATGCAAGAATTTGCAAATGCTTTTTATTTTCTGCGCTTAATTCGGCGGGTTGCAAAAGTTTTATTTTGACATTTTATATTTAACCTTTTATTTTTTGTTTATCCTTGATGACTTCATGGTGCATTGGAAGTTTGAAACTACATAACTTTATATCTTTGGATGTTTTTGACATTTTGATGTTTTTACTATGTAGTATTACTATTGGTCTTTAAGGATTTAACATTTATATATATATATATATATATATGTATGTATATATGCATATATATATATGTATGTATGTATATATGTATATATATATTTGCATTTATTTGTTGGGCCTCACTTAACTGTGTAGAGTAAGCCACCAATATGTCGTATTTGTACATGGCTACCCAAAAAAAGCAAAATGTAAGGACTTATCACTTATCTATAAAGGTTCGCTTATCTATTAAGTTTCTTGCATATTTGGAATGGCTTAACTTTAATAATAAAAAGGGCAGAATACTATGAGGGAATTCATTGAAAGGCCTTTTGCACGAATTATGGTGGGAACGTAATCAGAGGATCTTTCATGACTCACATATGTCCTGGCCTCGAAGCTTGAAATTGTAAAGCTTAAAGCCTCATCTTGGTGTTCTTTGTCTAAATCTCGGGATACAACACCCAAGACATCTTCTCCAACTAGGCCGCTTTCTTTTAATTTCTAGAGAATGTTTCTTCTACTTTTGCATTAGTTCTTCGGGTCTTTACTGTTTTCCCTACTGGTTTTTATTTCTATTTCATCCCTTTTGGGATTTGTCCCTGTACTCTTTTCTTTTTCATAGCCTTAACGTAAAGTTTGTCTCTTTGTTAAAAAAAATAAAGGTTCTTGCATTTCTTTCTTTCCACGAATGGCATAACAATGCTCTGAAGGAACAACCACCTTTACTTTCCTTTTCAAATTCTATGCATTTAGGCTTGACTCTCACTGTCTCAACAATCAAGGATATAGTAAAATAGTGTCGTTCTTCCCACCAACCAAAAATGGATCCCAGTATCTGTGCCTACTGCCTGAAGGTAGCTCCATAGTTATTTTCTTTGACGATTTTGATGCTTTAGTAGGGATCTGGAGAGGAGACATGTAATAGGTTGGCATGCTGAGTGAACTGATTCAGTAGCAGTGAGTGTTCAGCATTCCTTTGTGTAATAACATGCATTCATCGAAATGTTCTTCTTAGAAACCCTATGGTAGTCAAAATCTACAAGCCCAACTCATTATTGCAGTAGACCCCCCAAAATATGGTAGTAACTGCTTGATTAATCATTGATCAAATGGTCTTGTTTGCTGTCTATTATCGTTATTGTGAACTCTTATATTATTCTTTCTCATTCTCCTTTAATATTGTTTCAAGGACAGGGAAAACACTTCTTGCGAAAACCTTGGCACGCTTTGTTAATGTTCCATTTGTTATTGCTGATGCAACTACCCTAACACAGGTAAATTTCATTCAATTGTAATGTTTTGCTAACAGGAAGTTAGAATTATAAATTTTTAATGACTCAACCGGAGAAAAGTGATTCAGTTTGTAACCGTAGAGTTAGTCTATCTAATAATTGTTAGGACATAGTATTGAGTTAAGTTGCTTCCATCATTGACGTTTTTTGGTTGAAATTCTTTTTGGCTGTTTATGTAGGCAGGATATGTTGGAGAAGATGTGGAGTCTATATTATACAAACTTCTGATGGTATGTACCCGAGTACAGCAAGGAATTTCACTTCACATCCAATATATCAATTAATAATTAAAACTATCCAGCATACGTTGTCTTTTGTTGTGCTCTTACTGAGTTACTGTAGTCTGTATATTGAGTGGCATATATTTTTTTGTTCGTTGAATTCATAACTCATAAATGTAAAAGCTTTTTTTTCTTCCCGATACTTAGTTCAAACCTGTAACTTGTTTCATTTTTGCTTTGTCTGTGGTCCTTAATATTCTCCTATCTTGATATTATTTTCTGATCAAGAAACTACTTTTCATTAAAAATATGAAAGATAATGTTGTCCACATGGGAGTGATAAAAAAACTAGGTAAAAAACCCACATGGTTATACCTTCTTATCTCGATGTCGTTCTCATATGTATTTAAATGTCAGGTTGCTGATTATAATGTGGCAGCTGCACAGCAGGGCATTGTGTACATAGATGAAGTTGATAAAATTACCAAGAAGGTTCTCCTTGGTTCTTATTTTCATCTCTCCCTACCCACCTTCTATGGAAGGACTGGTGTGAATTTTCTCAACCTGATAACTGTATTGTGTTTTTATGAGGCAGGCAGAGAGCCTTAACATCAGCAGAGACGTGTCAGGAGAGGGTGTGCAGCAGGCTTTATTAAAAATGCTAGAAGGAACAGTAAGTTTTGCATTTCATTGTAGGTGAAGTTCTATGGTAGTATGCAGCAGCCACATGTGACTTATGATGCCATTGATACCATTGAGTTGAGACGTGAGACTGAAAATCAGTAGTTCTTAACTTCAATTCTAGCCCTACATAGTTTACATTTCTGGTTTTCTAGTTTTGTCGTGATGAGCTAATATGCAATATTCTTTTTATTTATTTATTTAAATGATGTAGATTGTAAATGTGCCTGAGAAGGGTGCACGAAAGCATCCAAGAGGTGAAAATATCCAGGTACATGCTGTACATTTAAATTTGCTTTCCCTGCAAGGAAATGAAAGTGGATTTGTAGATGTGTTGTTGCTGCTTATGAAATAACCATTTTTATACTTTTTTTATAATGATATGAGCTAATAAGATGTGTTGTTGCTGCTTATGAAATAACCGTTTTTGTACTTTTTTTTTATAATTATATGAGCAAATAAGTGGGGCTCATGTGTTTAATCATACGATCATAATATTTTACTCGTTTTTGAAGTAGTTCTTGACTTGGAAATTGTCAGAAGTTGTGGTATCAGGACTCGTGTATACATAATCATTATGAAATGCTTCCTTGCAGATTGACACCAAGGATATTCTTTTCATATGTGGGGGTGCCTTCATCGACCTGGAAAAAACTATCTCAGAAAGGTTATCTGCATGTAATATCTACTCTCGTTTACTCCTTACAGCTCTAATTATTAACATTACCTCTTAACTTTGGAGGAATTTTTCTTCAATTCAGGCGTCAAGATTCCTCTTTAGGGTTCGGGGCCCCTATTCGTGCAAACATGAGGACAGGTGGTGTTACAGATGCCATTGTTACATCTTCTCTATTGGAGACTGTAAGTGCAGACCACTCTTCAGTCTAAGTTACACTAACAACTCATGTTTGTCATTCTCTTACTGGTTTTTCATAGAAGATCTTATATTTTGCAGGTCGAAAGTAGTGACCTCATTGCATATGGACTAATACCCGAATTTGTGGGTCGATTCCCTATCCTTGTCAGTTTGTCTGCCCTAACAGAAAACCAACTCATTCAGGTATATTCTGAATTTTGTTCTTGTAATAGTTTCTTCTAAAAGATGGCCTTCATGCATTTCTTTCAACTTTTGGTCAAGTTATGGAATTTGTTTCCAAACAAAAGATCCAAAATTTACCGATTGCATGACGAGAGGTAGCTGCACAAGGTGATTGTAAATTTGTAGTTTCAGTCGACATTCCTTTAGCTGCACAAGTTTATTTTATTTTCATTCCATATTCTCTCAAAAGTCATGCTCGCAAGATATGTATGTGGAATAATACTACTTTTGCAAAGTGCCAAAGTATATGTACTCTTATATTTGGTTAGGAACCTACTCTTTGTGACAATACCAAGCTGGCCATCTCGCTAAGCTCTTAAGTTTTATCTATCTTAGTTTCTGTGAATTTAGGGTTTAGGGTAGTTTCTATGAATTTTATCATGGTTGACCTAGTGATCAAAGAGGAACTTAGAGATCTAAGAGGTTATAGGTTCAATCCATAGTGTCAGCTATTTAATTTTATACAGATTTCCTTGACAACTAAATGTGATACTTGATAGGGTCAAGCGTTTTGTCTCTTGAGAATAGTTGAGGTTCGTTTAAGCTGGCCCGGATACTCACGGATATAAATTTTTATCCAACTCAAAATGACTTGAATACTGGCATTTGTAGGTCTTGACAGAGCCAAAAAATGCATTGGGAAAGCAGTACAGAAAGATGTTCCAAATGAATGATGTAAGTTATTTTGTGCTGTACTTCTCAGATTCCAAGGGAAAACTTGAGTTTTTGAATTGACATATATTTACTTTGTTCCCTTGGAGAAATTATTGCTCCTGCTTTCTGGTTAACTTTGAGCATTTATATCTTGGGATAACGTGTCACCAGGTCAAGCTCCACCTAACTAAAGATGCGTTAAGATTAATTGCAAGAAAGGCAATGTCTAAGAACACTGGAGCACGGGGATTGCGATCAATATTGGAAAATCTATTGATGGATGCCATGTATGAGGTATGCCAACCCTATTTTTCCATGAGGATTCCACATTGGAAAAACGAATATCTTATCAATTCTTATAAATGTTCACAAATTGGTTTTGAGATGGAACCTTGTACTAACTAATATGATATTAGAGCCTATTAAATTCAAATGGGTATTTGGTCTAATAAAATGAAATTGGGGATGATTCAAGATTAGTTAGCCCAAAGTGTCACCGTCTCGAACAGACATATTGAGGATTCCACATTAAAAAGTGAGGAGACCTCCTAACATTTATAAGATACGGGTTACTAAAGAGAATATGGGTGTCTGAAGAAAGGATAACCTAATAAGAATAACGTTGAAACAAAAATCTAAGCTATAGGTATGAAAAAGGGCTTCAAACAATAGGAATAAGATATGAAGGAAAATTACTAAAGTTCTTAGAAACACACATACTGAGAGGCATTTAACTTGGCCAAAGACTAAGTGTCTCCCCGAGCCCCTCAACAAATCTTTCATGGCAACTACTACATGTGAAATAAGCGCTTGTCCATCATGAAGAGACACACACTAGATGACCCCAAAAAGCAACCCAAAATAGAAGTTATGTACTTTCTCCAGAGGATATAATTCATTTCCTTACATTGTAACAAAGAAGACGCCACTGCAATCCCAGCAATATGTGAACAAATGCCTATGAATTGAATCATTAATGTTAACCCCCTCTCGACAAACTAAGCAGAAAAGTTAAACGTTGTTATTGGGAATTCTAACCTTCTATAGCAAGGAGAATAAGTACCTATCCCACAGTCCCCATGGAATGGCGTGGTTAGATATCTCCTGTGTTTCTATTCTTTGGATGTCTCCCAACCTGGTCGAGGGACGGGCGTGGTTACTCTGGATATAGTGGAGTGAAGTTCCAATTCCCAGTTTCTATAAAAAAAAAATCTATCGCTTATTGACCTTAGGTAAAAGATGAACCTAAAGGAAAACCGTTGGGAAGAATTGCGGTCTTTGAATGGATACCCATGATCCTAGGATGATAATGAAAATGATAGAACCCATGATCCTAGGATGATAATGAAAATGATAGAACACATGTAGTGAAAGATAAAAGATAATGGGATTACACAATAAAAATGATCGAATCCATGCAAGTTCTTTCTCTCAGACGTGTAGCTTATGATGAGACAATCCTTCGGATGTGCATGTTTATTCTTTTAGGAGTCATAGTTGGTGGTTGTAGAGTATTGTAGTTTATCATGTTATCTTAAAAAATAGCTCATGGCGGAAAACCTTGTAATACTCTCATCTTATCAATAAAATTGTCTTTGTTTCCTATGAAAAAAAAAATTACAAAATAAGTTAGGTGTTCGAGGCACTTATTCTCCCTCCGTGAGATTTCTCTCAAGGCCTTAATTACTCACCAAAATAGTGCATGCCCCTTCCTTTCTCACTTGTATTTTATTACCAAATTTTCCTAACAAATTATTAACTAATGACAAACATACCTTTAAGTATCATGGGTTGGCCTAGCGGTGATAAAAACCTTGTGCAGTTGAGAGAAAAAGAACATCTAACATACACTTAACTCCTACCAATATTCTCATTTATATCCTAATAGCATTCCTATAAGAAAACTGACCAGCAAAGAATAGAGAATTAAAATTATAAGACATGCAACAATTACCCTAAAGAATGAAGGATGATAATCACAATGAGCAGCCTTAAAAGACGAGGAAACAAATAGAGGGAACCGAACTAGCACCCAATTCAACAAATAGTCCAGTATTTGAGTCTCAATTGAAAATTTCACAAATGAAGAAGAGGGAAAGAGAATGAGATGTGTTGAATTATGTTAAACCACCATTCAACCCAAAATTTTAAGCTTATAAGTTAAGGTAAATTTAATTATATCAACCAACACTCTCTCTCACTTGTGAGCTTTGGAATTTGAGAAATGCCCTACAAGTATAATTTAAATTTTAATTGGAGATGAAATGACTCGGCAGGGGTTCGAATTTAGGACTTCCAACTCTTGTACCAAGTTAAATTATGTTAAACCATCGATCAACCAAATTCCTTCCTAGTCGTTCCTATACCTTTAACCACACAAAGTTCAAGACGCACCCAAAAAGGTGAGACCCCCACTAGTCACAATAACCCTATGGTGCAAAGCCTTAAACAATGACCAAGAATGAAACAACACCACTTTTCTTCCTTTGGAAGCCAATAGTAACCTAAAATAAGTTGCATCTACTCTTGAGTGAACGTGGTTATATAACTTGTATTTTCTCACTGCATTAAATCATTTGACAAACAATGTCTGATGCTTTAACCTTCCATATCACCTTGGAGTTTATTGCAGATTCCTGATGTTAGAACAGGTGAAGATATAATCGATGCCGTTATCGTTGATGAAGAATCCTTTGGGTCAAACATCCCCAGTTCTGGCGCTAAAATTCTTCATGGAAAGGGCGCATTCGATTGCTATCTTTCAGGACAAAAGGTAGAAAATAGAAAGGTCACTATTTAATTGTTATTGATATTAACCACATTACGCGTCAAGAAAGCCTTAAAAAACCAAATGGTTATAGATTTAATTTATGGTGGTCACCTACATTCAAATATTGTAAGGTCAGACAGTGCGTGCTGACTTGGACACTCACAAATATTTTAAAAAATCAGATTATGATTACATAAGGTTCTTGGTAATCTAATAATGCCGCTTACACTTTGCTTTGCAGGCAACAAGTGAGGGTTCTGAAAGAGAGGCAGAGCCTGAAGGTGAAACAGATCTTCCTTCGGTTGTTGCCAGCAGCATGTAACCAACCATTTGTGGAAGTCTATGTATTATAACTGTAATGTTGTACATATTACTAGTCTACATTTATTAATAATTCAAATTGGAAAGTATTTTCTCATAAAGATTAACCGATTCTCTAAAAAGTGTTGTTTCATTTTCAAAGTCCTGATTCCTTGAAAGCCACATATTTTCTCAATTATTCCCAAGGAGACTGTTCAATCATTTAAGCATGTGGCTGATGAAACAGCTGTGTTTTATCTCTGAAATTATTTCTCAGGGTTATTCTAGTTGTTTTTTTAGTAGAAAGACCAACAAATTGTACATATAGG

mRNA sequence

GAATGCTCCAAATAAGATATTCATTCAATCTTGAAGGCATAGTTGCGTAATTTTCTCAAAGGTTCTGCCGTCGTCTACTAGAGAGATTGATAATCTCTGTTTCTTCATCTTCTTCTTCTTCTTCTTCAATTTCCTTCCAATTTTCCCAATCCCCATTTACAGTTCCCTCCATGACCTAATTCCTAAAGCCCTTATCTCCTTCCTTCCTTTTCATTTCTCAATATACTTCTTTCAGCCATGGCCGCCGCCGCCGCCGCCCTCCGCTCAAGGTCCTCCATGGAAGCTGCCTGTTTAGCTGTTTCTCGTTGCCGCCGCCACTGTATTCCCAGTTATACTCGCGCTGCTACCAAACCCAACTCCCACTCCACGAACCCTAACAATCACTTGGTCTCATTCCGGCCGCTCAACGGTAGTCGGTCTTCCGATCATCGGAGGGTTTCCCCTAATTCTAACAACAGCTTGAATGGGAGCTTCAGCTGGGGCGATCGTCTTATGAGCACTTACGGGGACCCACCTGAGGTTTGGTCTGGTGATGGGATTGTGATTCGTGGGACCAATTCGAGCTTGAATGGTCGTGAAGGCGGCACTGGCGGCGGCGGTGGTGCTAACTCTGGTTCTGGTGGTGGGTTTGGCTCGAATTCGAATGATGGGTGCTGGGGTGGTTCCAGTTTGGGACCTAATTTTCCAACCCCGAAGGAAATCTCCAAGGGGCTTGATAAGTTTGTGATTGGTCAGGAGAAAGCTAAAAAGGTGCTCTCTGTGGGTGTTTACAATCACTACAAGCGTATCTATCATGAATCCTTACAAAGGCCCTCAGGAGATGCTGTTAACAACAAAGCTGATGCCGTTGATGATGATAAAGTAGAACTTGAAAAAAGTAACATCCTTCTGATGGGGCCAACAGGCTCAGGGAAAACACTTCTTGCGAAAACCTTGGCACGCTTTGTTAATGTTCCATTTGTTATTGCTGATGCAACTACCCTAACACAGGCAGGATATGTTGGAGAAGATGTGGAGTCTATATTATACAAACTTCTGATGGTTGCTGATTATAATGTGGCAGCTGCACAGCAGGGCATTGTGTACATAGATGAAGTTGATAAAATTACCAAGAAGGCAGAGAGCCTTAACATCAGCAGAGACGTGTCAGGAGAGGGTGTGCAGCAGGCTTTATTAAAAATGCTAGAAGGAACAATTGTAAATGTGCCTGAGAAGGGTGCACGAAAGCATCCAAGAGGTGAAAATATCCAGATTGACACCAAGGATATTCTTTTCATATGTGGGGGTGCCTTCATCGACCTGGAAAAAACTATCTCAGAAAGGCGTCAAGATTCCTCTTTAGGGTTCGGGGCCCCTATTCGTGCAAACATGAGGACAGGTGGTGTTACAGATGCCATTGTTACATCTTCTCTATTGGAGACTGTCGAAAGTAGTGACCTCATTGCATATGGACTAATACCCGAATTTGTGGGTCGATTCCCTATCCTTGTCAGTTTGTCTGCCCTAACAGAAAACCAACTCATTCAGGTCTTGACAGAGCCAAAAAATGCATTGGGAAAGCAGTACAGAAAGATGTTCCAAATGAATGATGTCAAGCTCCACCTAACTAAAGATGCGTTAAGATTAATTGCAAGAAAGGCAATGTCTAAGAACACTGGAGCACGGGGATTGCGATCAATATTGGAAAATCTATTGATGGATGCCATGTATGAGATTCCTGATGTTAGAACAGGTGAAGATATAATCGATGCCGTTATCGTTGATGAAGAATCCTTTGGGTCAAACATCCCCAGTTCTGGCGCTAAAATTCTTCATGGAAAGGGCGCATTCGATTGCTATCTTTCAGGACAAAAGGCAACAAGTGAGGGTTCTGAAAGAGAGGCAGAGCCTGAAGGTGAAACAGATCTTCCTTCGGTTGTTGCCAGCAGCATGTAACCAACCATTTGTGGAAGTCTATGTATTATAACTGTAATGTTGTACATATTACTAGTCTACATTTATTAATAATTCAAATTGGAAAGTATTTTCTCATAAAGATTAACCGATTCTCTAAAAAGTGTTGTTTCATTTTCAAAGTCCTGATTCCTTGAAAGCCACATATTTTCTCAATTATTCCCAAGGAGACTGTTCAATCATTTAAGCATGTGGCTGATGAAACAGCTGTGTTTTATCTCTGAAATTATTTCTCAGGGTTATTCTAGTTGTTTTTTTAGTAGAAAGACCAACAAATTGTACATATAGG

Coding sequence (CDS)

ATGGCCGCCGCCGCCGCCGCCCTCCGCTCAAGGTCCTCCATGGAAGCTGCCTGTTTAGCTGTTTCTCGTTGCCGCCGCCACTGTATTCCCAGTTATACTCGCGCTGCTACCAAACCCAACTCCCACTCCACGAACCCTAACAATCACTTGGTCTCATTCCGGCCGCTCAACGGTAGTCGGTCTTCCGATCATCGGAGGGTTTCCCCTAATTCTAACAACAGCTTGAATGGGAGCTTCAGCTGGGGCGATCGTCTTATGAGCACTTACGGGGACCCACCTGAGGTTTGGTCTGGTGATGGGATTGTGATTCGTGGGACCAATTCGAGCTTGAATGGTCGTGAAGGCGGCACTGGCGGCGGCGGTGGTGCTAACTCTGGTTCTGGTGGTGGGTTTGGCTCGAATTCGAATGATGGGTGCTGGGGTGGTTCCAGTTTGGGACCTAATTTTCCAACCCCGAAGGAAATCTCCAAGGGGCTTGATAAGTTTGTGATTGGTCAGGAGAAAGCTAAAAAGGTGCTCTCTGTGGGTGTTTACAATCACTACAAGCGTATCTATCATGAATCCTTACAAAGGCCCTCAGGAGATGCTGTTAACAACAAAGCTGATGCCGTTGATGATGATAAAGTAGAACTTGAAAAAAGTAACATCCTTCTGATGGGGCCAACAGGCTCAGGGAAAACACTTCTTGCGAAAACCTTGGCACGCTTTGTTAATGTTCCATTTGTTATTGCTGATGCAACTACCCTAACACAGGCAGGATATGTTGGAGAAGATGTGGAGTCTATATTATACAAACTTCTGATGGTTGCTGATTATAATGTGGCAGCTGCACAGCAGGGCATTGTGTACATAGATGAAGTTGATAAAATTACCAAGAAGGCAGAGAGCCTTAACATCAGCAGAGACGTGTCAGGAGAGGGTGTGCAGCAGGCTTTATTAAAAATGCTAGAAGGAACAATTGTAAATGTGCCTGAGAAGGGTGCACGAAAGCATCCAAGAGGTGAAAATATCCAGATTGACACCAAGGATATTCTTTTCATATGTGGGGGTGCCTTCATCGACCTGGAAAAAACTATCTCAGAAAGGCGTCAAGATTCCTCTTTAGGGTTCGGGGCCCCTATTCGTGCAAACATGAGGACAGGTGGTGTTACAGATGCCATTGTTACATCTTCTCTATTGGAGACTGTCGAAAGTAGTGACCTCATTGCATATGGACTAATACCCGAATTTGTGGGTCGATTCCCTATCCTTGTCAGTTTGTCTGCCCTAACAGAAAACCAACTCATTCAGGTCTTGACAGAGCCAAAAAATGCATTGGGAAAGCAGTACAGAAAGATGTTCCAAATGAATGATGTCAAGCTCCACCTAACTAAAGATGCGTTAAGATTAATTGCAAGAAAGGCAATGTCTAAGAACACTGGAGCACGGGGATTGCGATCAATATTGGAAAATCTATTGATGGATGCCATGTATGAGATTCCTGATGTTAGAACAGGTGAAGATATAATCGATGCCGTTATCGTTGATGAAGAATCCTTTGGGTCAAACATCCCCAGTTCTGGCGCTAAAATTCTTCATGGAAAGGGCGCATTCGATTGCTATCTTTCAGGACAAAAGGCAACAAGTGAGGGTTCTGAAAGAGAGGCAGAGCCTGAAGGTGAAACAGATCTTCCTTCGGTTGTTGCCAGCAGCATGTAA

Protein sequence

MAAAAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKPNSHSTNPNNHLVSFRPLNGSRSSDHRRVSPNSNNSLNGSFSWGDRLMSTYGDPPEVWSGDGIVIRGTNSSLNGREGGTGGGGGANSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSGAKILHGKGAFDCYLSGQKATSEGSEREAEPEGETDLPSVVASSM

Homology

[Close]

BLAST of Sed0005177 vs. NCBI nr
Match: XP_022141335.1 (CLP protease regulatory subunit CLPX1, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 907.5 bits (2344), Expect = 5.7e-260
Identity = 494/582 (84.88%), Postives = 518/582 (89.00%), Query Frame = 0


Query: 4   AAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKPNSHSTNPNN----------HLVSF 63
           AA ALRSRSS E A L ++R R+  I +Y  A +KPNSH T  N           HLVSF
Sbjct: 2   AAVALRSRSSKEVATLTLARYRQ-SISNYIHAGSKPNSHCTARNKSNDLYLNSPYHLVSF 61

Query: 64  RPL--------NGSRSSDHRRVSPNSNNSLNGSFS--WGDRLMSTYGDPPEVWSGDGIVI 123
           +P+        NGS+  DHRR+ PNSN +LNG  S   GD  MSTYGDPPEVWSGDGI+I
Sbjct: 62  KPVSLRGDFVKNGSQIFDHRRIYPNSNKNLNGKLSRGRGDSFMSTYGDPPEVWSGDGIMI 121

Query: 124 RGTNSSLNGREGGTGGGGGANSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFV 183
           RG+NSSLNGR    GGGG ANSGSGG FGSNSNDGCWGGSSLGPNFPTPKEI KGLDKFV
Sbjct: 122 RGSNSSLNGR---GGGGGSANSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEICKGLDKFV 181

Query: 184 IGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTG 243
           IGQE++KKVLSVGVYNHYKRIYHESLQRP+GD VN+KADAVDDDKVELEKSNILLMGPTG
Sbjct: 182 IGQERSKKVLSVGVYNHYKRIYHESLQRPTGDTVNSKADAVDDDKVELEKSNILLMGPTG 241

Query: 244 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY 303
           SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY
Sbjct: 242 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY 301

Query: 304 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKD 363
           IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTKD
Sbjct: 302 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTKD 361

Query: 364 ILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIA 423
           ILF+CGGAFIDLEKTISERRQDSSLGFGAP+RANMRTGGVTDAIVTSSLLETVESSDLIA
Sbjct: 362 ILFVCGGAFIDLEKTISERRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIA 421

Query: 424 YGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRL 483
           YGLIPEFVGRFPILVSLSALTENQL+QVLTEPKNALGKQYRKMF MN VKLH T++ALRL
Sbjct: 422 YGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFLMNGVKLHFTENALRL 481

Query: 484 IARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSGAK 543
           IARKAMSKNTGARGLRSILENLLMDAMYEIPD +TGEDIIDAVIVDEES GS+  S GAK
Sbjct: 482 IARKAMSKNTGARGLRSILENLLMDAMYEIPDAKTGEDIIDAVIVDEESIGSDGSSCGAK 541

Query: 544 ILHGKGAFDCYLSGQKATSEGSEREAEPEGETDLPSVVASSM 566
           ILHGKGA D YLSGQKATSEGSERE EPEGETDLPSVVASSM
Sbjct: 542 ILHGKGALDRYLSGQKATSEGSEREPEPEGETDLPSVVASSM 579

[Close]

BLAST of Sed0005177 vs. NCBI nr
Match: XP_022968640.1 (CLP protease regulatory subunit CLPX1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 906.0 bits (2340), Expect = 1.7e-259
Identity = 494/584 (84.59%), Postives = 518/584 (88.70%), Query Frame = 0


Query: 1   MAAAAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKPNSHSTNPNN----------HL 60
           MAAAA   RSRSS E A L +SRC RHC+ +Y  +A+ P SH T+ N           HL
Sbjct: 1   MAAAALRSRSRSSKEVASLTLSRC-RHCVSNYIHSASNPISHCTSRNKSNDLYLSSPFHL 60

Query: 61  VSFRPL--------NGSRSSDHRRVSPNSNNSLNGSFSWGDRLMSTYGDPPEVWSGDGIV 120
           VSF+ +        NG++SSDHR   PNSN +LN   S G   MSTYGDPPEVWSGDGIV
Sbjct: 61  VSFKSVSLRGDFLHNGTQSSDHRMAYPNSNKNLNERLSRGGCFMSTYGDPPEVWSGDGIV 120

Query: 121 IRGTNSSLNGREGGTGGGGGANSGS-GGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDK 180
           IRG+NSSLNGR  G GGGG ANSGS GGGFG+NSNDGCWGGSSLGPNFPTPKEISKGLDK
Sbjct: 121 IRGSNSSLNGR--GGGGGGSANSGSGGGGFGANSNDGCWGGSSLGPNFPTPKEISKGLDK 180

Query: 181 FVIGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGP 240
           FVIGQE+AKKVLSVGVYNHYKRIYHESLQRP+GD V NKADAVDDDKVELEKSNILLMGP
Sbjct: 181 FVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTVTNKADAVDDDKVELEKSNILLMGP 240

Query: 241 TGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGI 300
           TGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGI
Sbjct: 241 TGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGI 300

Query: 301 VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDT 360
           VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDT
Sbjct: 301 VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDT 360

Query: 361 KDILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDL 420
           KDILFICGGAFIDLEKTISERRQDSSLGFGAP+RANMR  GVTDAIVTSSLLETVESSDL
Sbjct: 361 KDILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRASGVTDAIVTSSLLETVESSDL 420

Query: 421 IAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDAL 480
           IAYGLIPEFVGRFPILVSLSALTE+QL+QVLTEPKNALGKQYRKMFQMNDVKLH T++AL
Sbjct: 421 IAYGLIPEFVGRFPILVSLSALTEDQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENAL 480

Query: 481 RLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSG 540
           RLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVI+DEES GS+    G
Sbjct: 481 RLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIIDEESIGSDSTGCG 540

Query: 541 AKILHGKGAFDCYLSGQKATSEGSEREAEPEGETDLPSVVASSM 566
           AKIL+GKGA D YLSGQK TS+GSE EAEPE ETDLPSVVASSM
Sbjct: 541 AKILYGKGALDRYLSGQKTTSQGSEEEAEPESETDLPSVVASSM 581

[Close]

BLAST of Sed0005177 vs. NCBI nr
Match: XP_022945005.1 (CLP protease regulatory subunit CLPX1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 902.5 bits (2331), Expect = 1.8e-258
Identity = 490/581 (84.34%), Postives = 516/581 (88.81%), Query Frame = 0


Query: 4   AAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKPNSHSTNPNN----------HLVSF 63
           AAAALRSRSS E A L +SRC RHC+ +Y  +A+ P SH    N           HLVSF
Sbjct: 2   AAAALRSRSSKEVASLTLSRC-RHCVSNYIHSASNPISHCARRNKSNDLYLSSPFHLVSF 61

Query: 64  RPL--------NGSRSSDHRRVSPNSNNSLNGSFSWGDRLMSTYGDPPEVWSGDGIVIRG 123
           + +        +G++  DHRR  PNSN +LN   S G   MSTYGDPPEVWSGDGIVIRG
Sbjct: 62  KSVSLRGDFLHHGTQPFDHRRAYPNSNKNLNERLSRGGCFMSTYGDPPEVWSGDGIVIRG 121

Query: 124 TNSSLNGREGGTGGGGGANSGS-GGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVI 183
           +NSSLNG   G GGGG ANSGS GGGFG+NSNDGCWGGSSLGPNFPTPKEISKGLDKFVI
Sbjct: 122 SNSSLNGH--GGGGGGSANSGSGGGGFGANSNDGCWGGSSLGPNFPTPKEISKGLDKFVI 181

Query: 184 GQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTGS 243
           GQE+AKKVLSVGVYNHYKRIYHESLQRP+GD VNNKADAVDDDKVELEKSNILLMGPTGS
Sbjct: 182 GQERAKKVLSVGVYNHYKRIYHESLQRPTGDTVNNKADAVDDDKVELEKSNILLMGPTGS 241

Query: 244 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYI 303
           GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYI
Sbjct: 242 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYI 301

Query: 304 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDI 363
           DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDI
Sbjct: 302 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDI 361

Query: 364 LFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIAY 423
           LFICGGAFIDLEKTISERRQDSSLGFGAP+RANMR  GVTDAIVTSSLLETVESSDLIAY
Sbjct: 362 LFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRASGVTDAIVTSSLLETVESSDLIAY 421

Query: 424 GLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRLI 483
           GLIPEFVGRFPILVSLSALTE+QL+QVLTEPKNALGKQYRKMFQMNDVKLH T+++LRLI
Sbjct: 422 GLIPEFVGRFPILVSLSALTEDQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENSLRLI 481

Query: 484 ARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSGAKI 543
           ARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVI+DEES GS+    GAKI
Sbjct: 482 ARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIIDEESIGSDSTGCGAKI 541

Query: 544 LHGKGAFDCYLSGQKATSEGSEREAEPEGETDLPSVVASSM 566
           L+GKGA D YLSGQK TS+GSE+EAEPE ETDLPSVVASSM
Sbjct: 542 LYGKGALDRYLSGQKTTSQGSEKEAEPESETDLPSVVASSM 579

[Close]

BLAST of Sed0005177 vs. NCBI nr
Match: XP_022141334.1 (CLP protease regulatory subunit CLPX1, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 901.4 bits (2328), Expect = 4.1e-258
Identity = 494/587 (84.16%), Postives = 518/587 (88.25%), Query Frame = 0


Query: 4   AAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKPNSHSTNPNN----------HLVSF 63
           AA ALRSRSS E A L ++R R+  I +Y  A +KPNSH T  N           HLVSF
Sbjct: 2   AAVALRSRSSKEVATLTLARYRQ-SISNYIHAGSKPNSHCTARNKSNDLYLNSPYHLVSF 61

Query: 64  RPL--------NGSRSSDHRRVSPNSNNSLNGSFS--WGDRLMSTYGDPPEVWSGDGIVI 123
           +P+        NGS+  DHRR+ PNSN +LNG  S   GD  MSTYGDPPEVWSGDGI+I
Sbjct: 62  KPVSLRGDFVKNGSQIFDHRRIYPNSNKNLNGKLSRGRGDSFMSTYGDPPEVWSGDGIMI 121

Query: 124 RGTNSSLNGREGGTGGGGGANSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFV 183
           RG+NSSLNGR    GGGG ANSGSGG FGSNSNDGCWGGSSLGPNFPTPKEI KGLDKFV
Sbjct: 122 RGSNSSLNGR---GGGGGSANSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEICKGLDKFV 181

Query: 184 IGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTG 243
           IGQE++KKVLSVGVYNHYKRIYHESLQRP+GD VN+KADAVDDDKVELEKSNILLMGPTG
Sbjct: 182 IGQERSKKVLSVGVYNHYKRIYHESLQRPTGDTVNSKADAVDDDKVELEKSNILLMGPTG 241

Query: 244 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY 303
           SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY
Sbjct: 242 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY 301

Query: 304 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKD 363
           IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTKD
Sbjct: 302 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTKD 361

Query: 364 ILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIA 423
           ILF+CGGAFIDLEKTISERRQDSSLGFGAP+RANMRTGGVTDAIVTSSLLETVESSDLIA
Sbjct: 362 ILFVCGGAFIDLEKTISERRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIA 421

Query: 424 YGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRL 483
           YGLIPEFVGRFPILVSLSALTENQL+QVLTEPKNALGKQYRKMF MN VKLH T++ALRL
Sbjct: 422 YGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFLMNGVKLHFTENALRL 481

Query: 484 IARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSGAK 543
           IARKAMSKNTGARGLRSILENLLMDAMYEIPD +TGEDIIDAVIVDEES GS+  S GAK
Sbjct: 482 IARKAMSKNTGARGLRSILENLLMDAMYEIPDAKTGEDIIDAVIVDEESIGSDGSSCGAK 541

Query: 544 ILHGKGAFDCYLSGQ-----KATSEGSEREAEPEGETDLPSVVASSM 566
           ILHGKGA D YLSGQ     KATSEGSERE EPEGETDLPSVVASSM
Sbjct: 542 ILHGKGALDRYLSGQKVEERKATSEGSEREPEPEGETDLPSVVASSM 584

[Close]

BLAST of Sed0005177 vs. NCBI nr
Match: KAG6574254.1 (CLP protease regulatory subunit CLPX1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 899.8 bits (2324), Expect = 1.2e-257
Identity = 491/581 (84.51%), Postives = 518/581 (89.16%), Query Frame = 0


Query: 4   AAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKPNSH--STNPNN--------HLVSF 63
           AAAALRSRSS E A L +SRC RHC+ +Y  +A+ P SH  S N +N        HLVSF
Sbjct: 2   AAAALRSRSSKEVASLTLSRC-RHCVSNYIHSASNPISHCASRNKSNDLYLSSPFHLVSF 61

Query: 64  RPL--------NGSRSSDHRRVSPNSNNSLNGSFSWGDRLMSTYGDPPEVWSGDGIVIRG 123
           + +        +G++  DHR   PNSN +LN   S G   MSTYGDPPEVWSGDGIVIRG
Sbjct: 62  KSVSLRGDFLHHGTQPFDHRGAYPNSNKTLNERLSRGGCFMSTYGDPPEVWSGDGIVIRG 121

Query: 124 TNSSLNGREGGTGGGGGANSGS-GGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVI 183
           +NSSLNG   G GGGG ANSGS GGGFG+NSNDGCWGGSSLGPNFPTPKEISKGLDKFVI
Sbjct: 122 SNSSLNGH--GGGGGGSANSGSGGGGFGANSNDGCWGGSSLGPNFPTPKEISKGLDKFVI 181

Query: 184 GQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTGS 243
           GQE+AKKVLSVGVYNHYKRIYHESLQRP+GD VNNKADAVDDDKVELEKSNILLMGPTGS
Sbjct: 182 GQERAKKVLSVGVYNHYKRIYHESLQRPTGDTVNNKADAVDDDKVELEKSNILLMGPTGS 241

Query: 244 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYI 303
           GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYI
Sbjct: 242 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYI 301

Query: 304 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDI 363
           DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDI
Sbjct: 302 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDI 361

Query: 364 LFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIAY 423
           LFICGGAFIDLEKTISERRQDSSLGFGAP+RANMR  GVTDAIVTSSLLETVESSDLIAY
Sbjct: 362 LFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRASGVTDAIVTSSLLETVESSDLIAY 421

Query: 424 GLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRLI 483
           GLIPEFVGRFPILVSLSALTE+QL+QVLTEPKNALGKQYRKMFQMNDVKLH T++ALRLI
Sbjct: 422 GLIPEFVGRFPILVSLSALTEDQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENALRLI 481

Query: 484 ARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSGAKI 543
           ARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVI+DEES GS+    GAKI
Sbjct: 482 ARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIIDEESIGSDSTGCGAKI 541

Query: 544 LHGKGAFDCYLSGQKATSEGSEREAEPEGETDLPSVVASSM 566
           L+GKGA D YLSGQK TS+GSE+EAEPE ETDLPSVVASS+
Sbjct: 542 LYGKGALDRYLSGQKTTSQGSEKEAEPESETDLPSVVASSI 579

[Close]

BLAST of Sed0005177 vs. ExPASy Swiss-Prot
Match: Q9FK07 (CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX1 PE=2 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 3.5e-196
Identity = 400/581 (68.85%), Postives = 449/581 (77.28%), Query Frame = 0


Query: 5   AAALRSRSSMEAACLAVSRCRRHCIPSY--TRAATKP---NSHSTNPNNHLVSFRPLNGS 64
           AAALRS +S E A L +S  R          R AT P   N  S +          L  S
Sbjct: 2   AAALRSNTSRETASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKFPYKISSLGTS 61

Query: 65  ----RSSDHRRVSPN---SNNSLNGSFSWGDRLMSTYGDPPEVWS--GDGIVIRGTNSSL 124
               R    RR S     +   L+G  S    ++S+ GDPP++W   GDG+ +R   SS+
Sbjct: 62  FLDNRGGGERRNSTKCYAAQKKLSGVGS-SVVILSSQGDPPDLWQPPGDGVSVRVNGSSV 121

Query: 125 NGREGGTGGGGGANSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQEKAK 184
           N   GG GGGG +  G G G GSNS + CWGGS+LG +FPTPKEI KGL+KFVIGQE+AK
Sbjct: 122 NLGRGG-GGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAK 181

Query: 185 KVLSVGVYNHYKRIYHESLQ-RPSGDAVNNKADAVDDDKVELEKSNILLMGPTGSGKTLL 244
           KVLSV VYNHYKRIYHES Q R +G+  +  A   DDD VELEKSNILLMGPTGSGKTLL
Sbjct: 182 KVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSGKTLL 241

Query: 245 AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDK 304
           AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLL VADYNVAAAQQGIVYIDEVDK
Sbjct: 242 AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDK 301

Query: 305 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICG 364
           ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG+NIQIDTKDILFICG
Sbjct: 302 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICG 361

Query: 365 GAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPE 424
           GAF+D+EKTISERR DSS+GFGAP+RANMR GGVT+A V S+L+ETVESSDLIAYGLIPE
Sbjct: 362 GAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDLIAYGLIPE 421

Query: 425 FVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRLIARKAM 484
           FVGRFP+LVSLSALTENQL+QVLTEPKNALGKQY+KM+QMN VKLH T+ ALRLIARKA+
Sbjct: 422 FVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESALRLIARKAI 481

Query: 485 SKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESF-GSNIPSSGAKILHGK 544
           +KNTGARGLR++LE++LMD+MYEIPD  TG D+I+AV+VDEE+  G     SGAKIL GK
Sbjct: 482 TKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGK 541

Query: 545 GAFDCYLS------GQKATSEGSEREAEPEGETDLPSVVAS 564
           GA   YLS        + T EGS+ E E E E  +PSVVAS
Sbjct: 542 GALARYLSETNSKDSPQTTKEGSDGETEVEAE--IPSVVAS 578

[Close]

BLAST of Sed0005177 vs. ExPASy Swiss-Prot
Match: Q66GN9 (CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX3 PE=2 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 1.3e-161
Identity = 325/474 (68.57%), Postives = 371/474 (78.27%), Query Frame = 0


Query: 70  NSNNSLNGSFSWGDRLMSTYGDPPEVWSGDGIVIRGTNSSLNGREGGTGGGGGANSG-SG 129
           N  N L  SF W D L S   +PPE WS         +S LN     T     + S    
Sbjct: 175 NYRNKLRSSF-W-DTLRSYGAEPPEDWSPP-----PPHSPLNSSPPNTIPVNASPSAVDT 234

Query: 130 GGFGSNSND-GCWGGSSLGPNFPTPKEISKGLDKFVIGQEKAKKVLSVGVYNHYKRIYHE 189
                  ND   WGG+ LG +FPTPKEI K LDKFVIGQ +AKKVLSV VYNHYKRIYH 
Sbjct: 235 SPLPDAVNDVSRWGGAGLGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHT 294

Query: 190 SLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADAT 249
           S+++ S           DDD VEL+KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADAT
Sbjct: 295 SMKKGSA-----AQPIDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADAT 354

Query: 250 TLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEG 309
           TLTQAGYVG+DVESIL+KLL VA++NV AAQQGIVYIDEVDKITKKAESLNISRDVSGEG
Sbjct: 355 TLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEG 414

Query: 310 VQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSS 369
           VQQALLK+LEGTIVNVP KGARKHPRG++IQIDTKDILFICGGAF+DLEKTI +RRQDSS
Sbjct: 415 VQQALLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSS 474

Query: 370 LGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQ 429
           +GFGAP+RANM T GVT   +TSSLLE+VES+DL AYGLIPEFVGRFPILVSLSALTE+Q
Sbjct: 475 IGFGAPVRANMATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQ 534

Query: 430 LIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRLIARKAMSKNTGARGLRSILENLLM 489
           LI+VL EPKNALGKQY+K+F MN+VKLH T+ AL +I+++AM KNTGARGLR++LE++L 
Sbjct: 535 LIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGARGLRALLESILT 594

Query: 490 DAMYEIPDVRTGEDIIDAVIVDEESFGSNIP-SSGAKILHGKGAFDCYLSGQKA 541
           +AM+EIPD + G++ IDAVIVDEES  S       AKIL G GAF+ YLS  K+
Sbjct: 595 EAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCTAKILRGDGAFERYLSENKS 636

[Close]

BLAST of Sed0005177 vs. ExPASy Swiss-Prot
Match: F4K7F6 (CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX2 PE=3 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 2.8e-145
Identity = 275/407 (67.57%), Postives = 329/407 (80.84%), Query Frame = 0


Query: 150 PTPKEISKGLDKFVIGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDD--D 209
           PTPKEI +GLD+FVIGQEKAKKVLSV VYNHYKRIYH S ++ S     N  D  DD  D
Sbjct: 198 PTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYN-IDMEDDNID 257

Query: 210 KVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLL 269
            VEL+KSN+LL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESILYKL 
Sbjct: 258 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLY 317

Query: 270 MVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV--PE 329
           + A  NV  AQ+GIVYIDEVDK+T K+ S N  RDVSGEGVQQ+LLK+LEGT+V+V  PE
Sbjct: 318 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPE 377

Query: 330 KGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTD 389
           KG R+ PRG++IQ+DTKDILFICGGAFIDLEKT+SER+ D+S+GFGA +R NM T G++ 
Sbjct: 378 KGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSS 437

Query: 390 AIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRK 449
           A VTSSLLE+++S DL+AYGLIPEFVGR PILVSLSAL E+QL+QVLTEPK+ALGKQY+K
Sbjct: 438 AAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKK 497

Query: 450 MFQMNDVKLHLTKDALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPD-VRTGEDIID 509
           +F+MN+V+L  T+ A RLIARKAMSKNTGARGLRSILE++L +AM+E+PD +  G   I 
Sbjct: 498 LFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIK 557

Query: 510 AVIVDEESFGS-NIPSSGAKILHGKGAFDCYLSGQKATSEGSEREAE 551
           AV+VDEE+ GS   P  GAKIL G      ++   ++  +  E EA+
Sbjct: 558 AVLVDEEAVGSVGSPGCGAKILKGDNVLQQFVEEAESKEKSKEDEAK 603

[Close]

BLAST of Sed0005177 vs. ExPASy Swiss-Prot
Match: Q47FB7 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Dechloromonas aromatica (strain RCB) OX=159087 GN=clpX PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 3.3e-109
Identity = 203/371 (54.72%), Postives = 270/371 (72.78%), Query Frame = 0


Query: 148 NFPTPKEISKGLDKFVIGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDD 207
           + PTP+EIS  LD++VIGQE AK++LSV VYNHYKR+ H +  + +GD            
Sbjct: 60  DLPTPREISSILDQYVIGQEVAKRILSVAVYNHYKRLRHTA--KNAGD------------ 119

Query: 208 KVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLL 267
            VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 120 -VELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 179

Query: 268 MVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 327
              DY+V  AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT  ++P +G
Sbjct: 180 QKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASIPPQG 239

Query: 328 ARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAI 387
            RKHP  + +Q+DT +ILFICGGAF  LEK I  R +   +GFGA +++        D  
Sbjct: 240 GRKHPNQDFVQVDTTNILFICGGAFAGLEKVIQSRSERGGIGFGAEVKSK------DDGK 299

Query: 388 VTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMF 447
               +L   E  DLI +GLIPE +GR P++ +L  L E+ L+Q+LTEPKNAL KQY+K+F
Sbjct: 300 AVGKILLDAEPEDLIKFGLIPELIGRLPVVATLQELEESALVQILTEPKNALVKQYQKLF 359

Query: 448 QMNDVKLHLTKDALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVI 507
            M DV+L +   AL  IA+KA+++ TGARGLRSILE+ L+D MYE+P    G + ++ V+
Sbjct: 360 SMEDVELEIRPTALSAIAKKALARKTGARGLRSILEHALLDTMYELP----GMESVEKVV 405

Query: 508 VDEESFGSNIP 519
           +DE +   + P
Sbjct: 420 IDENTITGDTP 405

[Close]

BLAST of Sed0005177 vs. ExPASy Swiss-Prot
Match: Q0A6A8 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=clpX PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 4.3e-109
Identity = 208/370 (56.22%), Postives = 270/370 (72.97%), Query Frame = 0


Query: 143 SSLGPNFPTPKEISKGLDKFVIGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKAD 202
           SS G   P P EI++ LD+FV+GQE AKKVLSV VYNHYKR+          +A + K  
Sbjct: 59  SSAGAGLPRPHEINQVLDEFVVGQEHAKKVLSVAVYNHYKRL----------EAGSRK-- 118

Query: 203 AVDDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESI 262
               D+VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I
Sbjct: 119 ----DEVELSKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENI 178

Query: 263 LYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 322
           + KLL   DY+V  AQQGIVYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EGT  +
Sbjct: 179 IQKLLQKCDYDVEKAQQGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEGTTAS 238

Query: 323 VPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGG 382
           VP +G RKHP+ E +Q+DT  ILFICGGAF  L+K I +R +   +GF A I++      
Sbjct: 239 VPPQGGRKHPQQEFLQVDTGGILFICGGAFAGLDKVIQDRSEKGGIGFSAEIKSKDEKRS 298

Query: 383 VTDAIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQ 442
           V +       L+ VE  DL+ YGLIPEFVGR P++ +L  L E  L+++L+ PKNAL KQ
Sbjct: 299 VGET------LQDVEPEDLVKYGLIPEFVGRLPVVATLEELDEQALVEILSAPKNALVKQ 358

Query: 443 YRKMFQMNDVKLHLTKDALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDI 502
           Y+K+F+M  V+L   +DALR +ARKAM + TGARGLR+ILE++L+D MY++P +   E +
Sbjct: 359 YQKLFEMEGVELEFREDALRAVARKAMDRKTGARGLRTILEHVLLDTMYDLPSMENVEKV 406

Query: 503 I--DAVIVDE 511
           +  DAVI  E
Sbjct: 419 VVDDAVIRGE 406

[Close]

BLAST of Sed0005177 vs. ExPASy TrEMBL
Match: A0A6J1CHS6 (CLP protease regulatory subunit CLPX1, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011753 PE=4 SV=1)

HSP 1 Score: 907.5 bits (2344), Expect = 2.7e-260
Identity = 494/582 (84.88%), Postives = 518/582 (89.00%), Query Frame = 0


Query: 4   AAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKPNSHSTNPNN----------HLVSF 63
           AA ALRSRSS E A L ++R R+  I +Y  A +KPNSH T  N           HLVSF
Sbjct: 2   AAVALRSRSSKEVATLTLARYRQ-SISNYIHAGSKPNSHCTARNKSNDLYLNSPYHLVSF 61

Query: 64  RPL--------NGSRSSDHRRVSPNSNNSLNGSFS--WGDRLMSTYGDPPEVWSGDGIVI 123
           +P+        NGS+  DHRR+ PNSN +LNG  S   GD  MSTYGDPPEVWSGDGI+I
Sbjct: 62  KPVSLRGDFVKNGSQIFDHRRIYPNSNKNLNGKLSRGRGDSFMSTYGDPPEVWSGDGIMI 121

Query: 124 RGTNSSLNGREGGTGGGGGANSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFV 183
           RG+NSSLNGR    GGGG ANSGSGG FGSNSNDGCWGGSSLGPNFPTPKEI KGLDKFV
Sbjct: 122 RGSNSSLNGR---GGGGGSANSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEICKGLDKFV 181

Query: 184 IGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTG 243
           IGQE++KKVLSVGVYNHYKRIYHESLQRP+GD VN+KADAVDDDKVELEKSNILLMGPTG
Sbjct: 182 IGQERSKKVLSVGVYNHYKRIYHESLQRPTGDTVNSKADAVDDDKVELEKSNILLMGPTG 241

Query: 244 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY 303
           SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY
Sbjct: 242 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY 301

Query: 304 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKD 363
           IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTKD
Sbjct: 302 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTKD 361

Query: 364 ILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIA 423
           ILF+CGGAFIDLEKTISERRQDSSLGFGAP+RANMRTGGVTDAIVTSSLLETVESSDLIA
Sbjct: 362 ILFVCGGAFIDLEKTISERRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIA 421

Query: 424 YGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRL 483
           YGLIPEFVGRFPILVSLSALTENQL+QVLTEPKNALGKQYRKMF MN VKLH T++ALRL
Sbjct: 422 YGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFLMNGVKLHFTENALRL 481

Query: 484 IARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSGAK 543
           IARKAMSKNTGARGLRSILENLLMDAMYEIPD +TGEDIIDAVIVDEES GS+  S GAK
Sbjct: 482 IARKAMSKNTGARGLRSILENLLMDAMYEIPDAKTGEDIIDAVIVDEESIGSDGSSCGAK 541

Query: 544 ILHGKGAFDCYLSGQKATSEGSEREAEPEGETDLPSVVASSM 566
           ILHGKGA D YLSGQKATSEGSERE EPEGETDLPSVVASSM
Sbjct: 542 ILHGKGALDRYLSGQKATSEGSEREPEPEGETDLPSVVASSM 579

[Close]

BLAST of Sed0005177 vs. ExPASy TrEMBL
Match: A0A6J1HXR9 (CLP protease regulatory subunit CLPX1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111467801 PE=4 SV=1)

HSP 1 Score: 906.0 bits (2340), Expect = 8.0e-260
Identity = 494/584 (84.59%), Postives = 518/584 (88.70%), Query Frame = 0


Query: 1   MAAAAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKPNSHSTNPNN----------HL 60
           MAAAA   RSRSS E A L +SRC RHC+ +Y  +A+ P SH T+ N           HL
Sbjct: 1   MAAAALRSRSRSSKEVASLTLSRC-RHCVSNYIHSASNPISHCTSRNKSNDLYLSSPFHL 60

Query: 61  VSFRPL--------NGSRSSDHRRVSPNSNNSLNGSFSWGDRLMSTYGDPPEVWSGDGIV 120
           VSF+ +        NG++SSDHR   PNSN +LN   S G   MSTYGDPPEVWSGDGIV
Sbjct: 61  VSFKSVSLRGDFLHNGTQSSDHRMAYPNSNKNLNERLSRGGCFMSTYGDPPEVWSGDGIV 120

Query: 121 IRGTNSSLNGREGGTGGGGGANSGS-GGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDK 180
           IRG+NSSLNGR  G GGGG ANSGS GGGFG+NSNDGCWGGSSLGPNFPTPKEISKGLDK
Sbjct: 121 IRGSNSSLNGR--GGGGGGSANSGSGGGGFGANSNDGCWGGSSLGPNFPTPKEISKGLDK 180

Query: 181 FVIGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGP 240
           FVIGQE+AKKVLSVGVYNHYKRIYHESLQRP+GD V NKADAVDDDKVELEKSNILLMGP
Sbjct: 181 FVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTVTNKADAVDDDKVELEKSNILLMGP 240

Query: 241 TGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGI 300
           TGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGI
Sbjct: 241 TGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGI 300

Query: 301 VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDT 360
           VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDT
Sbjct: 301 VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDT 360

Query: 361 KDILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDL 420
           KDILFICGGAFIDLEKTISERRQDSSLGFGAP+RANMR  GVTDAIVTSSLLETVESSDL
Sbjct: 361 KDILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRASGVTDAIVTSSLLETVESSDL 420

Query: 421 IAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDAL 480
           IAYGLIPEFVGRFPILVSLSALTE+QL+QVLTEPKNALGKQYRKMFQMNDVKLH T++AL
Sbjct: 421 IAYGLIPEFVGRFPILVSLSALTEDQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENAL 480

Query: 481 RLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSG 540
           RLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVI+DEES GS+    G
Sbjct: 481 RLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIIDEESIGSDSTGCG 540

Query: 541 AKILHGKGAFDCYLSGQKATSEGSEREAEPEGETDLPSVVASSM 566
           AKIL+GKGA D YLSGQK TS+GSE EAEPE ETDLPSVVASSM
Sbjct: 541 AKILYGKGALDRYLSGQKTTSQGSEEEAEPESETDLPSVVASSM 581

[Close]

BLAST of Sed0005177 vs. ExPASy TrEMBL
Match: A0A6J1FZN7 (CLP protease regulatory subunit CLPX1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111449369 PE=4 SV=1)

HSP 1 Score: 902.5 bits (2331), Expect = 8.8e-259
Identity = 490/581 (84.34%), Postives = 516/581 (88.81%), Query Frame = 0


Query: 4   AAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKPNSHSTNPNN----------HLVSF 63
           AAAALRSRSS E A L +SRC RHC+ +Y  +A+ P SH    N           HLVSF
Sbjct: 2   AAAALRSRSSKEVASLTLSRC-RHCVSNYIHSASNPISHCARRNKSNDLYLSSPFHLVSF 61

Query: 64  RPL--------NGSRSSDHRRVSPNSNNSLNGSFSWGDRLMSTYGDPPEVWSGDGIVIRG 123
           + +        +G++  DHRR  PNSN +LN   S G   MSTYGDPPEVWSGDGIVIRG
Sbjct: 62  KSVSLRGDFLHHGTQPFDHRRAYPNSNKNLNERLSRGGCFMSTYGDPPEVWSGDGIVIRG 121

Query: 124 TNSSLNGREGGTGGGGGANSGS-GGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVI 183
           +NSSLNG   G GGGG ANSGS GGGFG+NSNDGCWGGSSLGPNFPTPKEISKGLDKFVI
Sbjct: 122 SNSSLNGH--GGGGGGSANSGSGGGGFGANSNDGCWGGSSLGPNFPTPKEISKGLDKFVI 181

Query: 184 GQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTGS 243
           GQE+AKKVLSVGVYNHYKRIYHESLQRP+GD VNNKADAVDDDKVELEKSNILLMGPTGS
Sbjct: 182 GQERAKKVLSVGVYNHYKRIYHESLQRPTGDTVNNKADAVDDDKVELEKSNILLMGPTGS 241

Query: 244 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYI 303
           GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYI
Sbjct: 242 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYI 301

Query: 304 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDI 363
           DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDI
Sbjct: 302 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDI 361

Query: 364 LFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIAY 423
           LFICGGAFIDLEKTISERRQDSSLGFGAP+RANMR  GVTDAIVTSSLLETVESSDLIAY
Sbjct: 362 LFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRASGVTDAIVTSSLLETVESSDLIAY 421

Query: 424 GLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRLI 483
           GLIPEFVGRFPILVSLSALTE+QL+QVLTEPKNALGKQYRKMFQMNDVKLH T+++LRLI
Sbjct: 422 GLIPEFVGRFPILVSLSALTEDQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENSLRLI 481

Query: 484 ARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSGAKI 543
           ARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVI+DEES GS+    GAKI
Sbjct: 482 ARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIIDEESIGSDSTGCGAKI 541

Query: 544 LHGKGAFDCYLSGQKATSEGSEREAEPEGETDLPSVVASSM 566
           L+GKGA D YLSGQK TS+GSE+EAEPE ETDLPSVVASSM
Sbjct: 542 LYGKGALDRYLSGQKTTSQGSEKEAEPESETDLPSVVASSM 579

[Close]

BLAST of Sed0005177 vs. ExPASy TrEMBL
Match: A0A6J1CIC8 (CLP protease regulatory subunit CLPX1, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011753 PE=4 SV=1)

HSP 1 Score: 901.4 bits (2328), Expect = 2.0e-258
Identity = 494/587 (84.16%), Postives = 518/587 (88.25%), Query Frame = 0


Query: 4   AAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKPNSHSTNPNN----------HLVSF 63
           AA ALRSRSS E A L ++R R+  I +Y  A +KPNSH T  N           HLVSF
Sbjct: 2   AAVALRSRSSKEVATLTLARYRQ-SISNYIHAGSKPNSHCTARNKSNDLYLNSPYHLVSF 61

Query: 64  RPL--------NGSRSSDHRRVSPNSNNSLNGSFS--WGDRLMSTYGDPPEVWSGDGIVI 123
           +P+        NGS+  DHRR+ PNSN +LNG  S   GD  MSTYGDPPEVWSGDGI+I
Sbjct: 62  KPVSLRGDFVKNGSQIFDHRRIYPNSNKNLNGKLSRGRGDSFMSTYGDPPEVWSGDGIMI 121

Query: 124 RGTNSSLNGREGGTGGGGGANSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFV 183
           RG+NSSLNGR    GGGG ANSGSGG FGSNSNDGCWGGSSLGPNFPTPKEI KGLDKFV
Sbjct: 122 RGSNSSLNGR---GGGGGSANSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEICKGLDKFV 181

Query: 184 IGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTG 243
           IGQE++KKVLSVGVYNHYKRIYHESLQRP+GD VN+KADAVDDDKVELEKSNILLMGPTG
Sbjct: 182 IGQERSKKVLSVGVYNHYKRIYHESLQRPTGDTVNSKADAVDDDKVELEKSNILLMGPTG 241

Query: 244 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY 303
           SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY
Sbjct: 242 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY 301

Query: 304 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKD 363
           IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTKD
Sbjct: 302 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTKD 361

Query: 364 ILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIA 423
           ILF+CGGAFIDLEKTISERRQDSSLGFGAP+RANMRTGGVTDAIVTSSLLETVESSDLIA
Sbjct: 362 ILFVCGGAFIDLEKTISERRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIA 421

Query: 424 YGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRL 483
           YGLIPEFVGRFPILVSLSALTENQL+QVLTEPKNALGKQYRKMF MN VKLH T++ALRL
Sbjct: 422 YGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFLMNGVKLHFTENALRL 481

Query: 484 IARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSGAK 543
           IARKAMSKNTGARGLRSILENLLMDAMYEIPD +TGEDIIDAVIVDEES GS+  S GAK
Sbjct: 482 IARKAMSKNTGARGLRSILENLLMDAMYEIPDAKTGEDIIDAVIVDEESIGSDGSSCGAK 541

Query: 544 ILHGKGAFDCYLSGQ-----KATSEGSEREAEPEGETDLPSVVASSM 566
           ILHGKGA D YLSGQ     KATSEGSERE EPEGETDLPSVVASSM
Sbjct: 542 ILHGKGALDRYLSGQKVEERKATSEGSEREPEPEGETDLPSVVASSM 584

[Close]

BLAST of Sed0005177 vs. ExPASy TrEMBL
Match: E5GBA0 (ATP-dependent clp protease ATP-binding subunit clpx OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 894.0 bits (2309), Expect = 3.1e-256
Identity = 485/574 (84.49%), Postives = 511/574 (89.02%), Query Frame = 0


Query: 3   AAAAALRSRSSMEAACLAVSRCRRHCIPSYTRAATKP---NSHSTNPNNHLVSFRPL--- 62
           AAAAALRSRSS E A L +SRC RHCI +   AA  P   N    N   HLVSF+P+   
Sbjct: 2   AAAAALRSRSSKEVATLTLSRC-RHCISNSIHAAFSPKKSNDCFLNSPYHLVSFKPVSLR 61

Query: 63  -----NGSRSSDHRRVSPNSNNSLNGSFSWGDRLMSTYGDPPEVWSGDGIVIRGTNSSLN 122
                +G++  DHRR+  NS  SLN   S     MSTYGDPPEVWSGDGIVIRG+NSSLN
Sbjct: 62  GDFFDSGTQPLDHRRIYQNSTKSLNHRLSKKGCFMSTYGDPPEVWSGDGIVIRGSNSSLN 121

Query: 123 GREGGTGGGGGANSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQEKAKK 182
           GR    G GG +N GSGGGFGSNSNDGCWGGSSLGPNFPTPKEI+KGLDKFVIGQ++AKK
Sbjct: 122 GR---GGDGGSSNPGSGGGFGSNSNDGCWGGSSLGPNFPTPKEIAKGLDKFVIGQDRAKK 181

Query: 183 VLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTGSGKTLLAK 242
           VLSVGVYNHYKRIYHESLQRP+GDA NNKADA DDDKVELEKSNILLMGPTGSGKTLLAK
Sbjct: 182 VLSVGVYNHYKRIYHESLQRPTGDAFNNKADAADDDKVELEKSNILLMGPTGSGKTLLAK 241

Query: 243 TLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKIT 302
           TLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKIT
Sbjct: 242 TLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKIT 301

Query: 303 KKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICGGA 362
           KKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICGGA
Sbjct: 302 KKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICGGA 361

Query: 363 FIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPEFV 422
           FIDLEKTISERRQDSSLGFGAP+RANMR GGVTDA+VTSSLLETVESSDLIAYGLIPEFV
Sbjct: 362 FIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPEFV 421

Query: 423 GRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRLIARKAMSK 482
           GRFPILVSLSALTENQL+QVLTEPKNALGKQYRKMFQMNDVKLH T++ALRLIARKAMSK
Sbjct: 422 GRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENALRLIARKAMSK 481

Query: 483 NTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESFGSNIPSSGAKILHGKGAF 542
           NTGARGLRSILENLLMD+MYEIPD+RTG+DIIDAV+VDEES GS+ P  GAKIL+GKGA 
Sbjct: 482 NTGARGLRSILENLLMDSMYEIPDIRTGKDIIDAVVVDEESVGSDSPGFGAKILYGKGAL 541

Query: 543 DCYLSGQKATSEGSEREAEPEGETDLPSVVASSM 566
           D YLSGQKATS+ SERE EPEGETDLPSVVAS M
Sbjct: 542 DRYLSGQKATSQDSEREPEPEGETDLPSVVASGM 571

[Close]

BLAST of Sed0005177 vs. TAIR 10
Match: AT5G53350.1 (CLP protease regulatory subunit X )

HSP 1 Score: 686.0 bits (1769), Expect = 2.5e-197
Identity = 400/581 (68.85%), Postives = 449/581 (77.28%), Query Frame = 0


Query: 5   AAALRSRSSMEAACLAVSRCRRHCIPSY--TRAATKP---NSHSTNPNNHLVSFRPLNGS 64
           AAALRS +S E A L +S  R          R AT P   N  S +          L  S
Sbjct: 2   AAALRSNTSRETASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKFPYKISSLGTS 61

Query: 65  ----RSSDHRRVSPN---SNNSLNGSFSWGDRLMSTYGDPPEVWS--GDGIVIRGTNSSL 124
               R    RR S     +   L+G  S    ++S+ GDPP++W   GDG+ +R   SS+
Sbjct: 62  FLDNRGGGERRNSTKCYAAQKKLSGVGS-SVVILSSQGDPPDLWQPPGDGVSVRVNGSSV 121

Query: 125 NGREGGTGGGGGANSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQEKAK 184
           N   GG GGGG +  G G G GSNS + CWGGS+LG +FPTPKEI KGL+KFVIGQE+AK
Sbjct: 122 NLGRGG-GGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAK 181

Query: 185 KVLSVGVYNHYKRIYHESLQ-RPSGDAVNNKADAVDDDKVELEKSNILLMGPTGSGKTLL 244
           KVLSV VYNHYKRIYHES Q R +G+  +  A   DDD VELEKSNILLMGPTGSGKTLL
Sbjct: 182 KVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSGKTLL 241

Query: 245 AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDK 304
           AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLL VADYNVAAAQQGIVYIDEVDK
Sbjct: 242 AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDK 301

Query: 305 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICG 364
           ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG+NIQIDTKDILFICG
Sbjct: 302 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICG 361

Query: 365 GAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPE 424
           GAF+D+EKTISERR DSS+GFGAP+RANMR GGVT+A V S+L+ETVESSDLIAYGLIPE
Sbjct: 362 GAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDLIAYGLIPE 421

Query: 425 FVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRLIARKAM 484
           FVGRFP+LVSLSALTENQL+QVLTEPKNALGKQY+KM+QMN VKLH T+ ALRLIARKA+
Sbjct: 422 FVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESALRLIARKAI 481

Query: 485 SKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESF-GSNIPSSGAKILHGK 544
           +KNTGARGLR++LE++LMD+MYEIPD  TG D+I+AV+VDEE+  G     SGAKIL GK
Sbjct: 482 TKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGK 541

Query: 545 GAFDCYLS------GQKATSEGSEREAEPEGETDLPSVVAS 564
           GA   YLS        + T EGS+ E E E E  +PSVVAS
Sbjct: 542 GALARYLSETNSKDSPQTTKEGSDGETEVEAE--IPSVVAS 578

[Close]

BLAST of Sed0005177 vs. TAIR 10
Match: AT1G33360.1 (ATP-dependent Clp protease )

HSP 1 Score: 571.2 bits (1471), Expect = 9.0e-163
Identity = 325/474 (68.57%), Postives = 371/474 (78.27%), Query Frame = 0


Query: 70  NSNNSLNGSFSWGDRLMSTYGDPPEVWSGDGIVIRGTNSSLNGREGGTGGGGGANSG-SG 129
           N  N L  SF W D L S   +PPE WS         +S LN     T     + S    
Sbjct: 175 NYRNKLRSSF-W-DTLRSYGAEPPEDWSPP-----PPHSPLNSSPPNTIPVNASPSAVDT 234

Query: 130 GGFGSNSND-GCWGGSSLGPNFPTPKEISKGLDKFVIGQEKAKKVLSVGVYNHYKRIYHE 189
                  ND   WGG+ LG +FPTPKEI K LDKFVIGQ +AKKVLSV VYNHYKRIYH 
Sbjct: 235 SPLPDAVNDVSRWGGAGLGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHT 294

Query: 190 SLQRPSGDAVNNKADAVDDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADAT 249
           S+++ S           DDD VEL+KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADAT
Sbjct: 295 SMKKGSA-----AQPIDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADAT 354

Query: 250 TLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEG 309
           TLTQAGYVG+DVESIL+KLL VA++NV AAQQGIVYIDEVDKITKKAESLNISRDVSGEG
Sbjct: 355 TLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEG 414

Query: 310 VQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSS 369
           VQQALLK+LEGTIVNVP KGARKHPRG++IQIDTKDILFICGGAF+DLEKTI +RRQDSS
Sbjct: 415 VQQALLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSS 474

Query: 370 LGFGAPIRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQ 429
           +GFGAP+RANM T GVT   +TSSLLE+VES+DL AYGLIPEFVGRFPILVSLSALTE+Q
Sbjct: 475 IGFGAPVRANMATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQ 534

Query: 430 LIQVLTEPKNALGKQYRKMFQMNDVKLHLTKDALRLIARKAMSKNTGARGLRSILENLLM 489
           LI+VL EPKNALGKQY+K+F MN+VKLH T+ AL +I+++AM KNTGARGLR++LE++L 
Sbjct: 535 LIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGARGLRALLESILT 594

Query: 490 DAMYEIPDVRTGEDIIDAVIVDEESFGSNIP-SSGAKILHGKGAFDCYLSGQKA 541
           +AM+EIPD + G++ IDAVIVDEES  S       AKIL G GAF+ YLS  K+
Sbjct: 595 EAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCTAKILRGDGAFERYLSENKS 636

[Close]

BLAST of Sed0005177 vs. TAIR 10
Match: AT5G49840.1 (ATP-dependent Clp protease )

HSP 1 Score: 516.9 bits (1330), Expect = 2.0e-146
Identity = 275/407 (67.57%), Postives = 329/407 (80.84%), Query Frame = 0


Query: 150 PTPKEISKGLDKFVIGQEKAKKVLSVGVYNHYKRIYHESLQRPSGDAVNNKADAVDD--D 209
           PTPKEI +GLD+FVIGQEKAKKVLSV VYNHYKRIYH S ++ S     N  D  DD  D
Sbjct: 198 PTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYN-IDMEDDNID 257

Query: 210 KVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLL 269
            VEL+KSN+LL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESILYKL 
Sbjct: 258 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLY 317

Query: 270 MVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV--PE 329
           + A  NV  AQ+GIVYIDEVDK+T K+ S N  RDVSGEGVQQ+LLK+LEGT+V+V  PE
Sbjct: 318 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPE 377

Query: 330 KGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPIRANMRTGGVTD 389
           KG R+ PRG++IQ+DTKDILFICGGAFIDLEKT+SER+ D+S+GFGA +R NM T G++ 
Sbjct: 378 KGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSS 437

Query: 390 AIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYRK 449
           A VTSSLLE+++S DL+AYGLIPEFVGR PILVSLSAL E+QL+QVLTEPK+ALGKQY+K
Sbjct: 438 AAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKK 497

Query: 450 MFQMNDVKLHLTKDALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPD-VRTGEDIID 509
           +F+MN+V+L  T+ A RLIARKAMSKNTGARGLRSILE++L +AM+E+PD +  G   I 
Sbjct: 498 LFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIK 557

Query: 510 AVIVDEESFGS-NIPSSGAKILHGKGAFDCYLSGQKATSEGSEREAE 551
           AV+VDEE+ GS   P  GAKIL G      ++   ++  +  E EA+
Sbjct: 558 AVLVDEEAVGSVGSPGCGAKILKGDNVLQQFVEEAESKEKSKEDEAK 603

[Close]

BLAST of Sed0005177 vs. TAIR 10
Match: AT5G19990.1 (regulatory particle triple-A ATPase 6A )

HSP 1 Score: 46.2 bits (108), Expect = 1.0e-04
Identity = 31/108 (28.70%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 212 EKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVAD 271
           +   +LL GP G+GKTLLA+ +A   +  F+    + L Q  Y+GE    +    +M  +
Sbjct: 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEGSRMVRELFVMARE 253

Query: 272 YNVAAAQQGIVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 319
           +        I+++DE+D I + + ES + + D   +     LL  L+G
Sbjct: 254 H-----APSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295

[Close]

BLAST of Sed0005177 vs. TAIR 10
Match: AT5G20000.1 (AAA-type ATPase family protein )

HSP 1 Score: 46.2 bits (108), Expect = 1.0e-04
Identity = 31/108 (28.70%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 212 EKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVAD 271
           +   +LL GP G+GKTLLA+ +A   +  F+    + L Q  Y+GE    +    +M  +
Sbjct: 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEGSRMVRELFVMARE 253

Query: 272 YNVAAAQQGIVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 319
           +        I+++DE+D I + + ES + + D   +     LL  L+G
Sbjct: 254 H-----APSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295

The following BLAST results are available for this feature:

BLAST of Sed0005177 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141335.1	5.7e-260	84.88	CLP protease regulatory subunit CLPX1, mitochondrial isoform X2 [Momordica chara...	[more]
XP_022968640.1	1.7e-259	84.59	CLP protease regulatory subunit CLPX1, mitochondrial-like [Cucurbita maxima]	[more]
XP_022945005.1	1.8e-258	84.34	CLP protease regulatory subunit CLPX1, mitochondrial-like [Cucurbita moschata]	[more]
XP_022141334.1	4.1e-258	84.16	CLP protease regulatory subunit CLPX1, mitochondrial isoform X1 [Momordica chara...	[more]
KAG6574254.1	1.2e-257	84.51	CLP protease regulatory subunit CLPX1, mitochondrial, partial [Cucurbita argyros...	[more]

BLAST of Sed0005177 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK07	3.5e-196	68.85	CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
Q66GN9	1.3e-161	68.57	CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
F4K7F6	2.8e-145	67.57	CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
Q47FB7	3.3e-109	54.72	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Dechloromonas aromatica (...	[more]
Q0A6A8	4.3e-109	56.22	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Alkalilimnicola ehrlichii...	[more]

BLAST of Sed0005177 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHS6	2.7e-260	84.88	CLP protease regulatory subunit CLPX1, mitochondrial isoform X2 OS=Momordica cha...	[more]
A0A6J1HXR9	8.0e-260	84.59	CLP protease regulatory subunit CLPX1, mitochondrial-like OS=Cucurbita maxima OX...	[more]
A0A6J1FZN7	8.8e-259	84.34	CLP protease regulatory subunit CLPX1, mitochondrial-like OS=Cucurbita moschata ...	[more]
A0A6J1CIC8	2.0e-258	84.16	CLP protease regulatory subunit CLPX1, mitochondrial isoform X1 OS=Momordica cha...	[more]
E5GBA0	3.1e-256	84.49	ATP-dependent clp protease ATP-binding subunit clpx OS=Cucumis melo subsp. melo ...	[more]

BLAST of Sed0005177 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53350.1	2.5e-197	68.85	CLP protease regulatory subunit X	[more]
AT1G33360.1	9.0e-163	68.57	ATP-dependent Clp protease	[more]
AT5G49840.1	2.0e-146	67.57	ATP-dependent Clp protease	[more]
AT5G19990.1	1.0e-04	28.70	regulatory particle triple-A ATPase 6A	[more]
AT5G20000.1	1.0e-04	28.70	AAA-type ATPase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 212..408 e-value: 6.7E-10 score: 48.9
IPR019489	Clp ATPase, C-terminal	SMART	SM01086	ClpB_D2_small_2	coord: 423..513 e-value: 1.7E-28 score: 110.6
IPR019489	Clp ATPase, C-terminal	PFAM	PF10431	ClpB_D2-small	coord: 423..493 e-value: 4.0E-14 score: 52.4
IPR004487	Clp protease, ATP-binding subunit ClpX	TIGRFAM	TIGR00382	TIGR00382	coord: 148..509 e-value: 3.0E-150 score: 498.8
None	No IPR available	GENE3D	1.10.8.60		coord: 422..522 e-value: 1.7E-33 score: 116.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 539..565
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..77
None	No IPR available	PANTHER	PTHR48102:SF6	CLP PROTEASE REGULATORY SUBUNIT CLPX1, MITOCHONDRIAL	coord: 5..563
None	No IPR available	PANTHER	PTHR48102	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED	coord: 5..563
None	No IPR available	CDD	cd00009	AAA	coord: 213..324 e-value: 1.87955E-14 score: 69.0971
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 144..421 e-value: 7.8E-116 score: 388.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 149..509
IPR003959	ATPase, AAA-type, core	PFAM	PF07724	AAA_2	coord: 212..416 e-value: 1.3E-43 score: 149.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005177.1	Sed0005177.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0006457	protein folding
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0051082	unfolded protein binding