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Sed0005161 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTGCTAACCATGGTGGGTTTAAGCGTTATTCTCGAATCCAACCAGGGAGCTTTCTGTCAAAAAAAACCCACCCAAGTTCTCAGCAAAGCCTCCGTCGTGAACCGGACCGGGCACTATTCCTTGCAGCCCCAAACGCCGTCGTTTCCGAACCTCCATTCTTGCTACCTCTGTAACCAGATTCTCTTGCCCGAAAAAGACATCTATATGTACAGGTAATTTCTCTTTCTCTTTACGTTTATGTACATGGTCGGAAATGTTACGTTTATTTAATCGGGATCTCGCTGCTCGCAAAAATAAAAATATATACTTTTTTTTTTGTTTTCATATGTTATCGTACCAGTATTTGGATGAGAAGTTATTTTTGGTGATCAGAATGAGGTGTTATTTAGAGTGATTAAAAATTTGGGATTTATTAATAACAGGTTTGAATGTGGATTCTTTCCATCAATAGTTAGTTTTAATGTATAGATTTTGAAATTATGAATTATTTTGAGTTATTTCAAATGATTGAAATAGTTGGGTTGAGTGTGATTTTTTTGAGAAATAGTTATAAATGTGTATTTGTAAAAACACCTCTTGAGATTTTGAGAGTATCTTAGTTTTTTTTTTTTTTTACCTGATATTTGTATTCTTTTCTATTTTCTAAAATGGTTTTGCTACATATAGCTAATACAAAGTTAGTAAACCATACCATCATTATATTTTTTGTTTCATTTTTTTTAAATTATTGATGGTTTAATTATCATAGAGTAATTTAGTGATTTACTTGACAGTCAAAATGTTGAAGGGTTACAAGCATATTTCATTATGATAAATAAAGTGTATGTAAGTTGACCTCCAATAATTACAATATATATGTATAAAAAAAAAGTTCGGTATAACTACATTCAATATACATGTATCAAATACCAATTTTAGGATCGAACACATAACTATAATGTTGAATTGAATTTCTATCAAACAATAAAATCATTAGATCACTCACTCTTTCATTAAAAAAAATAACCTTAATTGTTAAGAGAATCTTAAATAATTAATTAGGAGGAATAGTTTCAATCAAATTGCCACTTTTTTTTTTAAATTGGAAAATTTGAGTTTCGCTTCATTATACTCAGAAATAATTACGTTCATCCTTAGGCCAGATATATAAGTTAATATCACTAGCGAATTCTAAACTGAGACCTTCAAATTTGTCACTTACATAAAAATTAATTCTCATAAATCTTTTCAGCATCCGTGACGATAGTTGAGTTGCGCGTAAACGAAAAGAATCATCGCTAATAAAATAAAAAGTAAACAAAGTTATTTATGGTTGTTTCTATTATACACAACATTTACAAACTAACATTGGAGTCTTATTCTCTTTTCTAGAGGGGACAGGGGATTTTGCAGCGTGGAGTGCAGGTGCAGGCAGATTATCATGGACGAACAAGAATCTCTAATGAAAGAAAACAATTCATCCATCAAAACGTCGTCGTTTTCGAGTCCCGAACCCGGTTCGAGTTCTTCATCAATGGCGGCTTCTCGTAACTGTAAATCCATAAGGAATAATGGGAGGGGAGAGTTAGCTTACTGGTAAGGAGGGAACAAGAACGGGAGATTTACCAAATTGCCCTTTGGCTGGTTTTGGGTGAAATGACACTTTTGCCCTTGAAAAGGAGTAGTGAGTGAGTTATGAAGAGTGTGCATTTTGGTCATTTCCTTTCTTCTCACGGTTTTTGGCGTTTTGTTTGCTTCTCAAGTAAAGGACTGCGCGGGCTCCAATTAAGTAACTTTTTCGGGGGCATTTTCGGAATTTCTCACTTTAATTGTGTTTGTAATGAAAATTAGATTTTTCTTTCGTGCTTTCACATTTTCTTCTTAGTCTTATTTTAATTTTAGTTTACGGTGTTGTTTGTGTTTTTAAATAAGTTATTGTAAACAGTAAGTTATTATGTCGCAAA CTTCTGCTAACCATGGTGGGTTTAAGCGTTATTCTCGAATCCAACCAGGGAGCTTTCTGTCAAAAAAAACCCACCCAAGTTCTCAGCAAAGCCTCCGTCGTGAACCGGACCGGGCACTATTCCTTGCAGCCCCAAACGCCGTCGTTTCCGAACCTCCATTCTTGCTACCTCTGTAACCAGATTCTCTTGCCCGAAAAAGACATCTATATGTACAGAGGGGACAGGGGATTTTGCAGCGTGGAGTGCAGGTGCAGGCAGATTATCATGGACGAACAAGAATCTCTAATGAAAGAAAACAATTCATCCATCAAAACGTCGTCGTTTTCGAGTCCCGAACCCGGTTCGAGTTCTTCATCAATGGCGGCTTCTCGTAACTGTAAATCCATAAGGAATAATGGGAGGGGAGAGTTAGCTTACTGGTAAGGAGGGAACAAGAACGGGAGATTTACCAAATTGCCCTTTGGCTGGTTTTGGGTGAAATGACACTTTTGCCCTTGAAAAGGAGTAGTGAGTGAGTTATGAAGAGTGTGCATTTTGGTCATTTCCTTTCTTCTCACGGTTTTTGGCGTTTTGTTTGCTTCTCAAGTAAAGGACTGCGCGGGCTCCAATTAAGTAACTTTTTCGGGGGCATTTTCGGAATTTCTCACTTTAATTGTGTTTGTAATGAAAATTAGATTTTTCTTTCGTGCTTTCACATTTTCTTCTTAGTCTTATTTTAATTTTAGTTTACGGTGTTGTTTGTGTTTTTAAATAAGTTATTGTAAACAGTAAGTTATTATGTCGCAAA ATGGTGGGTTTAAGCGTTATTCTCGAATCCAACCAGGGAGCTTTCTGTCAAAAAAAACCCACCCAAGTTCTCAGCAAAGCCTCCGTCGTGAACCGGACCGGGCACTATTCCTTGCAGCCCCAAACGCCGTCGTTTCCGAACCTCCATTCTTGCTACCTCTGTAACCAGATTCTCTTGCCCGAAAAAGACATCTATATGTACAGAGGGGACAGGGGATTTTGCAGCGTGGAGTGCAGGTGCAGGCAGATTATCATGGACGAACAAGAATCTCTAATGAAAGAAAACAATTCATCCATCAAAACGTCGTCGTTTTCGAGTCCCGAACCCGGTTCGAGTTCTTCATCAATGGCGGCTTCTCGTAACTGTAAATCCATAAGGAATAATGGGAGGGGAGAGTTAGCTTACTGGTAA MVGLSVILESNQGAFCQKKPTQVLSKASVVNRTGHYSLQPQTPSFPNLHSCYLCNQILLPEKDIYMYRGDRGFCSVECRCRQIIMDEQESLMKENNSSIKTSSFSSPEPGSSSSSMAASRNCKSIRNNGRGELAYW Homology
BLAST of Sed0005161 vs. NCBI nr
Match: XP_023000009.1 (uncharacterized protein LOC111494321 [Cucurbita maxima]) HSP 1 Score: 164.9 bits (416), Expect = 5.0e-37 Identity = 100/142 (70.42%), Postives = 112/142 (78.87%), Query Frame = 0
BLAST of Sed0005161 vs. NCBI nr
Match: KAG6593979.1 (FCS-Like Zinc finger 15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164.1 bits (414), Expect = 8.5e-37 Identity = 100/143 (69.93%), Postives = 112/143 (78.32%), Query Frame = 0
BLAST of Sed0005161 vs. NCBI nr
Match: KAG7026319.1 (Protein MARD1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 163.3 bits (412), Expect = 1.5e-36 Identity = 100/143 (69.93%), Postives = 111/143 (77.62%), Query Frame = 0
BLAST of Sed0005161 vs. NCBI nr
Match: XP_023515013.1 (uncharacterized protein LOC111779167 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 161.8 bits (408), Expect = 4.2e-36 Identity = 99/143 (69.23%), Postives = 111/143 (77.62%), Query Frame = 0
BLAST of Sed0005161 vs. NCBI nr
Match: XP_022930473.1 (protein MARD1 [Cucurbita moschata]) HSP 1 Score: 136.3 bits (342), Expect = 1.9e-28 Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of Sed0005161 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.3e-15 Identity = 61/154 (39.61%), Postives = 74/154 (48.05%), Query Frame = 0
BLAST of Sed0005161 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.8e-09 Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Sed0005161 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 6.6e-08 Identity = 35/116 (30.17%), Postives = 62/116 (53.45%), Query Frame = 0
BLAST of Sed0005161 vs. ExPASy Swiss-Prot
Match: P0DO11 (FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.5e-07 Identity = 40/121 (33.06%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of Sed0005161 vs. ExPASy Swiss-Prot
Match: P0DO12 (FCS-Like Zinc finger 18 OS=Arabidopsis thaliana OX=3702 GN=FLZ18 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.5e-07 Identity = 40/121 (33.06%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of Sed0005161 vs. ExPASy TrEMBL
Match: A0A6J1KIQ1 (uncharacterized protein LOC111494321 OS=Cucurbita maxima OX=3661 GN=LOC111494321 PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.4e-37 Identity = 100/142 (70.42%), Postives = 112/142 (78.87%), Query Frame = 0
BLAST of Sed0005161 vs. ExPASy TrEMBL
Match: A0A6J1EVA4 (protein MARD1 OS=Cucurbita moschata OX=3662 GN=LOC111436914 PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 9.2e-29 Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of Sed0005161 vs. ExPASy TrEMBL
Match: A0A1S3C923 (uncharacterized protein DDB_G0271670 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497839 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.6e-23 Identity = 71/121 (58.68%), Postives = 82/121 (67.77%), Query Frame = 0
BLAST of Sed0005161 vs. ExPASy TrEMBL
Match: A0A0A0KF32 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G319750 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.2e-22 Identity = 72/125 (57.60%), Postives = 85/125 (68.00%), Query Frame = 0
BLAST of Sed0005161 vs. ExPASy TrEMBL
Match: A0A2C9W973 (FLZ-type domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G197900 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 4.9e-22 Identity = 69/136 (50.74%), Postives = 88/136 (64.71%), Query Frame = 0
BLAST of Sed0005161 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 82.4 bits (202), Expect = 3.0e-16 Identity = 61/154 (39.61%), Postives = 74/154 (48.05%), Query Frame = 0
BLAST of Sed0005161 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 61.6 bits (148), Expect = 5.6e-10 Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Sed0005161 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 58.5 bits (140), Expect = 4.7e-09 Identity = 35/116 (30.17%), Postives = 62/116 (53.45%), Query Frame = 0
BLAST of Sed0005161 vs. TAIR 10
Match: AT1G53885.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08 Identity = 40/121 (33.06%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of Sed0005161 vs. TAIR 10
Match: AT1G53903.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08 Identity = 40/121 (33.06%), Postives = 68/121 (56.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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