Sed0004963 (gene) Chayote v1

Overview


Name	Sed0004963
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc finger protein WIP6
Location	LG03: 7546114 .. 7547661 (-)
RNA-Seq Expression	Sed0004963
Synteny	Sed0004963

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGCTCAAACTTGACTTGCTGCATCTCATCAAGCGATAGCGCCTGTTTGGATCAGCCTGGTGACGAAGGAGGAGAAGAATCCATTTTCCTTTCCCTTTCTCCTCCTGGCCAGCAACAACAACAACAACGCCCACGCTACTCCATTTCTACATCCACTTCCAAACATCACAAACAAACCAAACAAAACCCTAATCAAGATCCCACGGCGGCTGCTTCTTCAGCGGTCACCGTCGCCATGCACATTGCCCTTCCTAATTCCCTCTCCGCCGCCGCAGCCCGGCCGGTGGAGCCACACTACTGGATCCCTTCGCCTGCTCAAATCCTTGTTGGTCCCACCCAATTCTCTTGCTCTGTCTGCACTAAAACCTTCAACAGATACAACAACATGCAGGTACTTCTCCCCTTTTTTTTATTTTTTATTTTTAGGAAAAAATACATTTTCATTTTTTTGTTTTAAAATTGAACACTTTTAATTATGACATTTTGATAATGTTCAATTTTTAATTAGTTGTATAAGTTAATTTTATTCGATTAATTTTAAATTTTAATATATCAAATAATTTATTATTTTAGTTTAGACTTGAATTTAAATTTTTTTTTTTTTTTTTTAAATAAAAGCAAATGTAACTTAAAAATATGAACGACAAAAAATTGATTAAAATGTTAGTTTTACAAGTATTTAATTTTAAAATATAAGAACAAAATAGAAACTTCAACTTTAAATTTAGAGACTAAAAGCGTAATTTTTTATTTTTTTATAATTTTTTTTCACGAATTTCAAAGAATAAAAAATGTTCGTCAATTTTCTGAAAACCCAAGATTGATTTGTGTTTCTTCAAAACTCTTACATGATTTTTTTTATTTATTATTCAAGTTAATTTTCAAGATCCAAAAAAGGGAAAAATCCCACTTCCCAATTGATATTTTCAAAAGTTGAACAGATAGAGAAATAAAATTGACACTAAAAACAGCAAATTTAAGCTTAAAAAAGGGTATAATTGAGCATTAGAAGCTGAATTAAGGTTTTGAATTGTGCAAAAAACAGATGCACATGTGGGGGCATGGATCACAGTACAGAAAAGGCCCAGAGTCATTAAGAGGATCAAAGCCAGCATCATCAATGCTCAGACTTCCATGCTATTGCTGTGCAGAGGGCTGCAAGAACAACATAGATCACCCAAGGTCAAGGCCATTGAAAGACTTTAGGACACTTCAGACCCATTACAAGAGAAAGCATGGGGCAAAGCCCTTCACTTGTAGGAAATGTGGCAAGCCCTTTGCTGTTAGAGGGGATTGGAGGACACATGAGAAGAATTGTGGAAAGCTTTGGTTTTGCATTTGTGGCTCTGATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTAGAGCCTTTGGGGATGGCCATGCACCTCATACTGTTCAAGTTTGCGAGGTCGAAGATGATGATGATGATGATGATGATGATAATTGGGACAATCGTGAGGGTCGTGATGATCATCATGAACATGTAAATCCACTTCAAGGCTGGTCAATTTATCATTAG

mRNA sequence

ATGCAAAGCTCAAACTTGACTTGCTGCATCTCATCAAGCGATAGCGCCTGTTTGGATCAGCCTGGTGACGAAGGAGGAGAAGAATCCATTTTCCTTTCCCTTTCTCCTCCTGGCCAGCAACAACAACAACAACGCCCACGCTACTCCATTTCTACATCCACTTCCAAACATCACAAACAAACCAAACAAAACCCTAATCAAGATCCCACGGCGGCTGCTTCTTCAGCGGTCACCGTCGCCATGCACATTGCCCTTCCTAATTCCCTCTCCGCCGCCGCAGCCCGGCCGGTGGAGCCACACTACTGGATCCCTTCGCCTGCTCAAATCCTTGTTGGTCCCACCCAATTCTCTTGCTCTGTCTGCACTAAAACCTTCAACAGATACAACAACATGCAGATGCACATGTGGGGGCATGGATCACAGTACAGAAAAGGCCCAGAGTCATTAAGAGGATCAAAGCCAGCATCATCAATGCTCAGACTTCCATGCTATTGCTGTGCAGAGGGCTGCAAGAACAACATAGATCACCCAAGGTCAAGGCCATTGAAAGACTTTAGGACACTTCAGACCCATTACAAGAGAAAGCATGGGGCAAAGCCCTTCACTTGTAGGAAATGTGGCAAGCCCTTTGCTGTTAGAGGGGATTGGAGGACACATGAGAAGAATTGTGGAAAGCTTTGGTTTTGCATTTGTGGCTCTGATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTAGAGCCTTTGGGGATGGCCATGCACCTCATACTGTTCAAGTTTGCGAGGTCGAAGATGATGATGATGATGATGATGATGATAATTGGGACAATCGTGAGGGTCGTGATGATCATCATGAACATGTAAATCCACTTCAAGGCTGGTCAATTTATCATTAG

Coding sequence (CDS)

ATGCAAAGCTCAAACTTGACTTGCTGCATCTCATCAAGCGATAGCGCCTGTTTGGATCAGCCTGGTGACGAAGGAGGAGAAGAATCCATTTTCCTTTCCCTTTCTCCTCCTGGCCAGCAACAACAACAACAACGCCCACGCTACTCCATTTCTACATCCACTTCCAAACATCACAAACAAACCAAACAAAACCCTAATCAAGATCCCACGGCGGCTGCTTCTTCAGCGGTCACCGTCGCCATGCACATTGCCCTTCCTAATTCCCTCTCCGCCGCCGCAGCCCGGCCGGTGGAGCCACACTACTGGATCCCTTCGCCTGCTCAAATCCTTGTTGGTCCCACCCAATTCTCTTGCTCTGTCTGCACTAAAACCTTCAACAGATACAACAACATGCAGATGCACATGTGGGGGCATGGATCACAGTACAGAAAAGGCCCAGAGTCATTAAGAGGATCAAAGCCAGCATCATCAATGCTCAGACTTCCATGCTATTGCTGTGCAGAGGGCTGCAAGAACAACATAGATCACCCAAGGTCAAGGCCATTGAAAGACTTTAGGACACTTCAGACCCATTACAAGAGAAAGCATGGGGCAAAGCCCTTCACTTGTAGGAAATGTGGCAAGCCCTTTGCTGTTAGAGGGGATTGGAGGACACATGAGAAGAATTGTGGAAAGCTTTGGTTTTGCATTTGTGGCTCTGATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTAGAGCCTTTGGGGATGGCCATGCACCTCATACTGTTCAAGTTTGCGAGGTCGAAGATGATGATGATGATGATGATGATGATAATTGGGACAATCGTGAGGGTCGTGATGATCATCATGAACATGTAAATCCACTTCAAGGCTGGTCAATTTATCATTAG

Protein sequence

MQSSNLTCCISSSDSACLDQPGDEGGEESIFLSLSPPGQQQQQQRPRYSISTSTSKHHKQTKQNPNQDPTAAASSAVTVAMHIALPNSLSAAAARPVEPHYWIPSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNREGRDDHHEHVNPLQGWSIYH

Homology

[Close]

BLAST of Sed0004963 vs. NCBI nr
Match: XP_038875923.1 (zinc finger protein WIP6-like [Benincasa hispida])

HSP 1 Score: 456.8 bits (1174), Expect = 1.4e-124
Identity = 231/301 (76.74%), Postives = 247/301 (82.06%), Query Frame = 0


Query: 1   MQSSNLTCCISSSDSACLDQPGDEGGEESIFLSLSPPGQQQQQQRPRYSISTSTSKHHKQ 60
           MQ S    CISSS+SACL+  GDE GEESIFLSLSPPGQ       R+S S   SK H+ 
Sbjct: 1   MQQSWKLSCISSSESACLE--GDEEGEESIFLSLSPPGQ-------RHSFS---SKQHQS 60

Query: 61  TKQNPNQDPTAAASSAVTVAMHIALPNSLSAAAARPVEP----HYWIPSPAQILVGPTQF 120
           + QNPN    A    AVTVAMHI  P +LS+++   V P    HYWIP+PAQILVGPTQF
Sbjct: 61  SLQNPNHQNAAV---AVTVAMHIGPPPALSSSSTPAVRPLDAAHYWIPTPAQILVGPTQF 120

Query: 121 SCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIDH 180
           SCSVCTKTFNRYNNMQMHMWGHGS+YRKGPESLRGSKPASSMLRLPCYCCAEGCKNNI+H
Sbjct: 121 SCSVCTKTFNRYNNMQMHMWGHGSEYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEH 180

Query: 181 PRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFK 240
           PRSRPLKDFRTLQTHYKRKHGAKPF+CRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFK
Sbjct: 181 PRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFK 240

Query: 241 HKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNREGRDDHHEHVNPLQGWSIY 298
           HKRSLKDHVRAFGDGHAPHTVQ+CEVEDDDD DD D+ D        H+HVN  QGWSIY
Sbjct: 241 HKRSLKDHVRAFGDGHAPHTVQLCEVEDDDDWDDHDDTD--------HQHVNGPQGWSIY 278

[Close]

BLAST of Sed0004963 vs. NCBI nr
Match: XP_022155206.1 (zinc finger protein WIP6 [Momordica charantia])

HSP 1 Score: 451.8 bits (1161), Expect = 4.5e-123
Identity = 229/307 (74.59%), Postives = 252/307 (82.08%), Query Frame = 0


Query: 1   MQSSNLTCCISSSDSACLDQPGDEGGEESIFLSLSPPGQQQQQQRPRYSISTSTSKHHKQ 60
           MQSSN T CISSS+SACL+   DE GE+SIFLSL PPGQ+        SIS+   KH   
Sbjct: 1   MQSSNFT-CISSSESACLEP--DEEGEDSIFLSLCPPGQRHA------SISSKYQKH--- 60

Query: 61  TKQNPNQDPTAAASSAVTVAMHIALPNSLSA----AAARPVEPHYWIPSPAQILVGPTQF 120
               P  +PT  A +AVTVAMHI  P + +A     AARPV+  YWIP+PAQILVGPTQF
Sbjct: 61  ----PQNNPTHGA-AAVTVAMHIGPPLAAAADSTDGAARPVDGQYWIPTPAQILVGPTQF 120

Query: 121 SCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIDH 180
           SC+VC+KTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGC+NNI+H
Sbjct: 121 SCTVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCRNNIEH 180

Query: 181 PRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFK 240
           PRSRPLKDFRTLQTHYKRKHGAKPF+CRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFK
Sbjct: 181 PRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFK 240

Query: 241 HKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNREGRDD------HHEHVNPL 298
           HKRSLKDHVRAFGDGHAPHTVQVCEV+DDD+DD DD+WD  +  +D      HH+ VN  
Sbjct: 241 HKRSLKDHVRAFGDGHAPHTVQVCEVDDDDEDDVDDDWDIDKNNNDNNDILHHHQRVNGG 290

[Close]

BLAST of Sed0004963 vs. NCBI nr
Match: XP_022973621.1 (zinc finger protein WIP6-like [Cucurbita maxima])

HSP 1 Score: 442.2 bits (1136), Expect = 3.6e-120
Identity = 230/314 (73.25%), Postives = 250/314 (79.62%), Query Frame = 0


Query: 1   MQSSNLTCCISSSDSACL--DQPGDEGGEESIFLSLSPPGQQQQQQRPRYSISTSTSKH- 60
           M+S NLT CISSS+SACL  D+ G  GGE+SIFLSL PPGQ+           T +SKH 
Sbjct: 1   MRSGNLT-CISSSESACLEGDEEGGGGGEDSIFLSLCPPGQRH----------TVSSKHR 60

Query: 61  ---HKQTKQNPN---QDPTAA--ASSAVTVAMHIALPNSLSA------AAARPVEPHYWI 120
              +KQ   +PN   Q+P       +AVTVAMHI  P + +A      +AARPV+  YWI
Sbjct: 61  QLQNKQIPISPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWI 120

Query: 121 PSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPC 180
           P+PAQILVGPTQFSCSVC+KTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPC
Sbjct: 121 PTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPC 180

Query: 181 YCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNC 240
           YCCAEGCKNNI+HPRSRPLKDFRTLQTHYKRKHGAKPF+CRKCGKPFAVRGDWRTHEKNC
Sbjct: 181 YCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNC 240

Query: 241 GKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNREGRDDH 298
           GKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQ+CEVEDDD DD+DD           
Sbjct: 241 GKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDD----------- 292

[Close]

BLAST of Sed0004963 vs. NCBI nr
Match: XP_023546764.1 (zinc finger protein WIP6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546773.1 zinc finger protein WIP6-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441.4 bits (1134), Expect = 6.1e-120
Identity = 231/319 (72.41%), Postives = 250/319 (78.37%), Query Frame = 0


Query: 1   MQSSNLTCCISSSDSACLDQPGDE-------GGEESIFLSLSPPGQQQQQQRPRYSISTS 60
           M+S NLT CISSS+SACL+  GDE       GGE+SIFLSL PPGQ+           T 
Sbjct: 1   MRSGNLT-CISSSESACLE--GDEEGGGGGGGGEDSIFLSLCPPGQRH----------TV 60

Query: 61  TSKHHK-QTKQNP--------NQDPTAAASSAVTVAMHIALPNSLSA------AAARPVE 120
           +SKH + Q KQNP        N +      +AVTVAMHI  P + +A      +AARPV+
Sbjct: 61  SSKHRQLQNKQNPVTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVD 120

Query: 121 PHYWIPSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSM 180
             YWIP+PAQILVGPTQFSCSVC+KTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSM
Sbjct: 121 GQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSM 180

Query: 181 LRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRT 240
           LRLPCYCCAEGCKNNI+HPRSRPLKDFRTLQTHYKRKHGAKPF+CRKCGKPFAVRGDWRT
Sbjct: 181 LRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRT 240

Query: 241 HEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNRE 298
           HEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQ+CEVEDDD DD+DD      
Sbjct: 241 HEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDD------ 295

[Close]

BLAST of Sed0004963 vs. NCBI nr
Match: KAG6601746.1 (Zinc finger protein WIP6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 441.0 bits (1133), Expect = 7.9e-120
Identity = 231/315 (73.33%), Postives = 251/315 (79.68%), Query Frame = 0


Query: 1   MQSSNLTCCISSSDSACLDQPGDE---GGEESIFLSLSPPGQQQQQQRPRYSISTSTSKH 60
           M+S NLT CISSS+SACL+  GDE   GGE+SIFLSL PPGQ+           T +SKH
Sbjct: 1   MRSGNLT-CISSSESACLE--GDEEGGGGEDSIFLSLCPPGQRH----------TVSSKH 60

Query: 61  ----HKQTKQNPN---QDPTAA--ASSAVTVAMHIALPNSLSA------AAARPVEPHYW 120
               +KQ   +PN   Q+P       +AVTVAMHI  P + +A      +AARPV+  YW
Sbjct: 61  RQLQNKQIPVSPNSSLQNPNILHHQHAAVTVAMHIGPPANAAATESNDVSAARPVDGQYW 120

Query: 121 IPSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLP 180
           IP+PAQILVGPTQFSCSVC+KTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLP
Sbjct: 121 IPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLP 180

Query: 181 CYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKN 240
           CYCCAEGCKNNI+HPRSRPLKDFRTLQTHYKRKHGAKPF+CRKCGKPFAVRGDWRTHEKN
Sbjct: 181 CYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKN 240

Query: 241 CGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNREGRDD 298
           CGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQ+CEVEDDD DD+DD          
Sbjct: 241 CGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDD---------- 291

[Close]

BLAST of Sed0004963 vs. ExPASy Swiss-Prot
Match: Q9FX68 (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 5.4e-95
Identity = 178/287 (62.02%), Postives = 205/287 (71.43%), Query Frame = 0


Query: 25  GGEESIFLSLSPPGQQQQQQRPRYSISTSTSKHHKQTKQNPNQDPTAAASSAVTVAMHIA 84
           G E+S+ LSL PPGQQ        S   S+         NPN          VTVA+HI 
Sbjct: 11  GDEDSVVLSLGPPGQQYPSHNKPTSTKPSSDHEFNHPLTNPN---------GVTVALHIG 70

Query: 85  LP----------NSLSAAAARPVEPHYWIPSPAQILVGPTQFSCSVCTKTFNRYNNMQMH 144
            P          N+     AR  +  YWIPS +QILVGPTQFSCSVC KTFNR+NNMQMH
Sbjct: 71  PPSSDKETLSGGNNQEGLTAR--QGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMH 130

Query: 145 MWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKR 204
           MWGHGSQYRKGPESLRG+K +SS+LRLPCYCCAEGCKNNIDHPRS+PLKDFRTLQTHYKR
Sbjct: 131 MWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKR 190

Query: 205 KHGAKPFTCR-KCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHA 264
           KHGAKPF CR KC K FAVRGDWRTHEKNCGKLWFC+CGSDFKHKRSLKDHVRAFGDGHA
Sbjct: 191 KHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHA 250

Query: 265 PHTVQ-----VCEVEDDDDDDDDDNWDNREGRDDHHEHVNPLQGWSI 296
            HTV      + + ++DD++++++  D+ E  D H E+V   + + I
Sbjct: 251 AHTVSDRVVGIGDADEDDEEEEEEEEDDVEEEDAHEENVRGEKNYGI 286

[Close]

BLAST of Sed0004963 vs. ExPASy Swiss-Prot
Match: Q8W030 (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.2e-81
Identity = 131/173 (75.72%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 100 HYWIPSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSML 159
           H+WIP+P+QIL+GPTQFSC +C KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P ++ML
Sbjct: 240 HFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TAML 299

Query: 160 RLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTH 219
           +LPCYCCA GCKNNIDHPR+RPLKDFRTLQTHYKRKHG +PF CR+CGK FAV+GDWRTH
Sbjct: 300 KLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTH 359

Query: 220 EKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDD 273
           EKNCGKLW+C CGSDFKHKRSLKDHV+AFG+GH P     C ++ ++++   D
Sbjct: 360 EKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVP----CCGIDHEEEEAASD 407

[Close]

BLAST of Sed0004963 vs. ExPASy Swiss-Prot
Match: Q8W031 (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 6.4e-80
Identity = 142/226 (62.83%), Postives = 165/226 (73.01%), Query Frame = 0


Query: 46  PRYSISTSTSKHHKQTKQNPNQDPTAAASSAVTVAMHIALPNSLSAAAARPVEPHYWIPS 105
           P Y +  S   +         QD        VTV  H+   +       R    HYWIP+
Sbjct: 110 PNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHHGDLHR--GHHYWIPT 169

Query: 106 PAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYC 165
           P+QIL+GPTQF+C +C KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P + MLRLPC+C
Sbjct: 170 PSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TGMLRLPCFC 229

Query: 166 CAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNCGK 225
           CA GCKNNIDHPR++PLKDFRTLQTHYKRKHG+KPF CR CGK FAV+GDWRTHEKNCGK
Sbjct: 230 CAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGK 289

Query: 226 LWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDD 272
           LW+C CGSDFKHKRSLKDHV+AFG+GH P     C ++    D +D
Sbjct: 290 LWYCSCGSDFKHKRSLKDHVKAFGNGHVP-----CGIDSFGGDHED 327

[Close]

BLAST of Sed0004963 vs. ExPASy Swiss-Prot
Match: Q9SGD1 (Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-79
Identity = 124/168 (73.81%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 101 YWIPSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLR 160
           +WIPSPAQI VGP QF+CS+C+KTFNRYNNMQMHMWGHGS++RKG +SL+G+   +++LR
Sbjct: 165 FWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILR 224

Query: 161 LPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHE 220
           LPCYCCAEGCKNNI+HPRS+PLKDFRTLQTHYKRKHG+KPF+C KCGK  AV+GDWRTHE
Sbjct: 225 LPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHE 284

Query: 221 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDD 269
           KNCGKLW+C CGSDFKHKRSLKDH+R+FG GH+PH   + +  ++D +
Sbjct: 285 KNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEEDTE 332

[Close]

BLAST of Sed0004963 vs. ExPASy Swiss-Prot
Match: Q9SVY1 (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.2e-79
Identity = 150/262 (57.25%), Postives = 186/262 (70.99%), Query Frame = 0


Query: 29  SIFLSLSPPGQQQQQQRPRYSISTSTSK---HHKQT--KQNPNQDPTAAASSAVTVAMHI 88
           ++ + L  P  Q+       S S+S+S+   HH+    K++ + + +  A          
Sbjct: 125 ALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGGGEDDDED 184

Query: 89  ALPNSLSAAAARPVEPHYWIPSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYR 148
           ++        +R  +  YWIP+P+QIL+GPTQFSC VC KTFNRYNNMQMHMWGHGSQYR
Sbjct: 185 SVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYR 244

Query: 149 KGPESLRGSKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTC 208
           KGPESLRG++P + MLRLPCYCCA GC+NNIDHPR++PLKDFRTLQTHYKRKHG KPF C
Sbjct: 245 KGPESLRGTQP-TGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMC 304

Query: 209 RKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVE 268
           RKCGK FAVRGDWRTHEKNCGKLW+CICGSDFKHKRSLKDH++AFG+GH  + +      
Sbjct: 305 RKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGI------ 364

Query: 269 DDDDDDDDDNWDNREGRDDHHE 286
            D  D++D+     E  D+ HE
Sbjct: 365 -DGFDEEDEPASEVEQLDNDHE 378

[Close]

BLAST of Sed0004963 vs. ExPASy TrEMBL
Match: A0A6J1DR05 (zinc finger protein WIP6 OS=Momordica charantia OX=3673 GN=LOC111022346 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.2e-123
Identity = 229/307 (74.59%), Postives = 252/307 (82.08%), Query Frame = 0


Query: 1   MQSSNLTCCISSSDSACLDQPGDEGGEESIFLSLSPPGQQQQQQRPRYSISTSTSKHHKQ 60
           MQSSN T CISSS+SACL+   DE GE+SIFLSL PPGQ+        SIS+   KH   
Sbjct: 1   MQSSNFT-CISSSESACLEP--DEEGEDSIFLSLCPPGQRHA------SISSKYQKH--- 60

Query: 61  TKQNPNQDPTAAASSAVTVAMHIALPNSLSA----AAARPVEPHYWIPSPAQILVGPTQF 120
               P  +PT  A +AVTVAMHI  P + +A     AARPV+  YWIP+PAQILVGPTQF
Sbjct: 61  ----PQNNPTHGA-AAVTVAMHIGPPLAAAADSTDGAARPVDGQYWIPTPAQILVGPTQF 120

Query: 121 SCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIDH 180
           SC+VC+KTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGC+NNI+H
Sbjct: 121 SCTVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCRNNIEH 180

Query: 181 PRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFK 240
           PRSRPLKDFRTLQTHYKRKHGAKPF+CRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFK
Sbjct: 181 PRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFK 240

Query: 241 HKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNREGRDD------HHEHVNPL 298
           HKRSLKDHVRAFGDGHAPHTVQVCEV+DDD+DD DD+WD  +  +D      HH+ VN  
Sbjct: 241 HKRSLKDHVRAFGDGHAPHTVQVCEVDDDDEDDVDDDWDIDKNNNDNNDILHHHQRVNGG 290

[Close]

BLAST of Sed0004963 vs. ExPASy TrEMBL
Match: A0A6J1I950 (zinc finger protein WIP6-like OS=Cucurbita maxima OX=3661 GN=LOC111472204 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.7e-120
Identity = 230/314 (73.25%), Postives = 250/314 (79.62%), Query Frame = 0


Query: 1   MQSSNLTCCISSSDSACL--DQPGDEGGEESIFLSLSPPGQQQQQQRPRYSISTSTSKH- 60
           M+S NLT CISSS+SACL  D+ G  GGE+SIFLSL PPGQ+           T +SKH 
Sbjct: 1   MRSGNLT-CISSSESACLEGDEEGGGGGEDSIFLSLCPPGQRH----------TVSSKHR 60

Query: 61  ---HKQTKQNPN---QDPTAA--ASSAVTVAMHIALPNSLSA------AAARPVEPHYWI 120
              +KQ   +PN   Q+P       +AVTVAMHI  P + +A      +AARPV+  YWI
Sbjct: 61  QLQNKQIPISPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWI 120

Query: 121 PSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPC 180
           P+PAQILVGPTQFSCSVC+KTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPC
Sbjct: 121 PTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPC 180

Query: 181 YCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNC 240
           YCCAEGCKNNI+HPRSRPLKDFRTLQTHYKRKHGAKPF+CRKCGKPFAVRGDWRTHEKNC
Sbjct: 181 YCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNC 240

Query: 241 GKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNREGRDDH 298
           GKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQ+CEVEDDD DD+DD           
Sbjct: 241 GKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDD----------- 292

[Close]

BLAST of Sed0004963 vs. ExPASy TrEMBL
Match: A0A0A0KQ06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G365160 PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.6e-118
Identity = 222/301 (73.75%), Postives = 243/301 (80.73%), Query Frame = 0


Query: 1   MQSSNLTCCISSSDSACLDQPGDEGGEESIFLSLSPPGQQQQQQRPRYSISTSTSKHHKQ 60
           MQ S    CISSS+SACL+  GDE GEESIFLSLSPPG     QR  +S     + +   
Sbjct: 1   MQQSWKLSCISSSESACLE--GDEEGEESIFLSLSPPG-----QRTSFSSKQQQTIYPNS 60

Query: 61  TKQNPNQDPTAAASSAVTVAMHIALPNSL---SAAAARPVEPHYWIPSPAQILVGPTQFS 120
           + QNPN D      +AVTVAMHI  P +L   + AA RP++  YWIP+PAQILVGPTQFS
Sbjct: 61  SLQNPNNDNNHENGAAVTVAMHIGPPPALLSSTPAAVRPLD--YWIPTPAQILVGPTQFS 120

Query: 121 CSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIDHP 180
           CSVCTKTFNRYNNMQMHMWGHGS+YRKGPESLRGSK ASSMLR+PCYCCAEGCKNNI+HP
Sbjct: 121 CSVCTKTFNRYNNMQMHMWGHGSEYRKGPESLRGSKAASSMLRVPCYCCAEGCKNNIEHP 180

Query: 181 RSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKH 240
           RSRPLKDFRTLQTHYKRKHGAKPF+CRKCGK FAVRGDWRTHEKNCGKLWFCICGSDFKH
Sbjct: 181 RSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHEKNCGKLWFCICGSDFKH 240

Query: 241 KRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNREGRDDHHEHVN-PLQGWSIY 298
           KRSLKDHVRAFGDGHAPHTVQ+CEVEDD+DDDD   W   E    HH+++N   Q WSIY
Sbjct: 241 KRSLKDHVRAFGDGHAPHTVQLCEVEDDNDDDD---W---ESDHHHHQYLNGSPQTWSIY 286

[Close]

BLAST of Sed0004963 vs. ExPASy TrEMBL
Match: A0A6J1EW22 (zinc finger protein WIP6-like OS=Cucurbita moschata OX=3662 GN=LOC111436584 PE=3 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.8e-117
Identity = 227/314 (72.29%), Postives = 247/314 (78.66%), Query Frame = 0


Query: 1   MQSSNLTCCISSSDSACLDQ--PGDEGGEESIFLSLSPPGQQQQQQRPRYSISTSTSKH- 60
           M+S NLT CISSS+S   D+   G  GGE+SIFLSL PPGQ+           T +SKH 
Sbjct: 1   MRSGNLT-CISSSESLEGDEGGGGGGGGEDSIFLSLCPPGQRH----------TVSSKHR 60

Query: 61  ---HKQTKQNPN---QDPTAA--ASSAVTVAMHIALPNSLSA------AAARPVEPHYWI 120
              +KQ   +PN   Q+P       +AVTVAMHI  P + +A      +AARPV+  YWI
Sbjct: 61  QLQNKQIPVSPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWI 120

Query: 121 PSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPC 180
           P+PAQILVGPTQFSCSVC+KTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPC
Sbjct: 121 PTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPC 180

Query: 181 YCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNC 240
           YCCAEGCKNNI+HPRSRPLKDFRTLQTHYKRKHGAKPF+CRKCGKPFAVRGDWRTHEKNC
Sbjct: 181 YCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNC 240

Query: 241 GKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNREGRDDH 298
           GKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQ+CEVEDDD DD+DD           
Sbjct: 241 GKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDD----------- 292

[Close]

BLAST of Sed0004963 vs. ExPASy TrEMBL
Match: A0A5A7VHR3 (Zinc finger protein WIP6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00270 PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 6.8e-117
Identity = 220/302 (72.85%), Postives = 241/302 (79.80%), Query Frame = 0


Query: 1   MQSSNLTCCISSSDSACLDQPGDEGGEESIFLSLSPPGQQQQQQRPRYSISTSTSKHHKQ 60
           MQ S    CISSS+SACL+  GDE GEESIFLSLSPPG     QR  +S     + +   
Sbjct: 1   MQQSRKLSCISSSESACLE--GDEEGEESIFLSLSPPG-----QRNSFSSKQQQTIYPNS 60

Query: 61  TKQNPNQDPT---AAASSAVTVAMHIALPNSLSAAAARPVEP-HYWIPSPAQILVGPTQF 120
           + QNPN +         +AVTVAMHI  P +L ++A   V P  YWIP+PAQILVGPTQF
Sbjct: 61  SLQNPNNNNNNHHHENGAAVTVAMHIGPPPALISSAPSAVRPLDYWIPTPAQILVGPTQF 120

Query: 121 SCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIDH 180
           SCSVCTKTFNRYNNMQMHMWGHGS+YRKGPESLRGSK ASSMLR+PCYCCAEGCKNNI+H
Sbjct: 121 SCSVCTKTFNRYNNMQMHMWGHGSEYRKGPESLRGSKAASSMLRVPCYCCAEGCKNNIEH 180

Query: 181 PRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFK 240
           PRSRPLKDFRTLQTHYKRKHGAKPF+CRKCGK FAVRGDWRTHEKNCGKLWFCICGSDFK
Sbjct: 181 PRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHEKNCGKLWFCICGSDFK 240

Query: 241 HKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDDNWDNREGRDDHHEHVN-PLQGWSI 298
           HKRSLKDHVRAFGDGHAPHTVQ+CEVEDD+DDD+   W   E    HH+H+N   Q WSI
Sbjct: 241 HKRSLKDHVRAFGDGHAPHTVQLCEVEDDNDDDE---W---ESDHHHHQHLNGSPQTWSI 289

[Close]

BLAST of Sed0004963 vs. TAIR 10
Match: AT1G13290.1 (C2H2-like zinc finger protein )

HSP 1 Score: 349.0 bits (894), Expect = 3.8e-96
Identity = 178/287 (62.02%), Postives = 205/287 (71.43%), Query Frame = 0


Query: 25  GGEESIFLSLSPPGQQQQQQRPRYSISTSTSKHHKQTKQNPNQDPTAAASSAVTVAMHIA 84
           G E+S+ LSL PPGQQ        S   S+         NPN          VTVA+HI 
Sbjct: 11  GDEDSVVLSLGPPGQQYPSHNKPTSTKPSSDHEFNHPLTNPN---------GVTVALHIG 70

Query: 85  LP----------NSLSAAAARPVEPHYWIPSPAQILVGPTQFSCSVCTKTFNRYNNMQMH 144
            P          N+     AR  +  YWIPS +QILVGPTQFSCSVC KTFNR+NNMQMH
Sbjct: 71  PPSSDKETLSGGNNQEGLTAR--QGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMH 130

Query: 145 MWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKR 204
           MWGHGSQYRKGPESLRG+K +SS+LRLPCYCCAEGCKNNIDHPRS+PLKDFRTLQTHYKR
Sbjct: 131 MWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKR 190

Query: 205 KHGAKPFTCR-KCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHA 264
           KHGAKPF CR KC K FAVRGDWRTHEKNCGKLWFC+CGSDFKHKRSLKDHVRAFGDGHA
Sbjct: 191 KHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHA 250

Query: 265 PHTVQ-----VCEVEDDDDDDDDDNWDNREGRDDHHEHVNPLQGWSI 296
            HTV      + + ++DD++++++  D+ E  D H E+V   + + I
Sbjct: 251 AHTVSDRVVGIGDADEDDEEEEEEEEDDVEEEDAHEENVRGEKNYGI 286

[Close]

BLAST of Sed0004963 vs. TAIR 10
Match: AT3G20880.1 (WIP domain protein 4 )

HSP 1 Score: 304.7 bits (779), Expect = 8.2e-83
Identity = 131/173 (75.72%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 100 HYWIPSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSML 159
           H+WIP+P+QIL+GPTQFSC +C KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P ++ML
Sbjct: 240 HFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TAML 299

Query: 160 RLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTH 219
           +LPCYCCA GCKNNIDHPR+RPLKDFRTLQTHYKRKHG +PF CR+CGK FAV+GDWRTH
Sbjct: 300 KLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTH 359

Query: 220 EKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDDD 273
           EKNCGKLW+C CGSDFKHKRSLKDHV+AFG+GH P     C ++ ++++   D
Sbjct: 360 EKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVP----CCGIDHEEEEAASD 407

[Close]

BLAST of Sed0004963 vs. TAIR 10
Match: AT1G51220.1 (WIP domain protein 5 )

HSP 1 Score: 298.9 bits (764), Expect = 4.5e-81
Identity = 142/226 (62.83%), Postives = 165/226 (73.01%), Query Frame = 0


Query: 46  PRYSISTSTSKHHKQTKQNPNQDPTAAASSAVTVAMHIALPNSLSAAAARPVEPHYWIPS 105
           P Y +  S   +         QD        VTV  H+   +       R    HYWIP+
Sbjct: 110 PNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHHGDLHR--GHHYWIPT 169

Query: 106 PAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYC 165
           P+QIL+GPTQF+C +C KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P + MLRLPC+C
Sbjct: 170 PSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TGMLRLPCFC 229

Query: 166 CAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHEKNCGK 225
           CA GCKNNIDHPR++PLKDFRTLQTHYKRKHG+KPF CR CGK FAV+GDWRTHEKNCGK
Sbjct: 230 CAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGK 289

Query: 226 LWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDDDDD 272
           LW+C CGSDFKHKRSLKDHV+AFG+GH P     C ++    D +D
Sbjct: 290 LWYCSCGSDFKHKRSLKDHVKAFGNGHVP-----CGIDSFGGDHED 327

[Close]

BLAST of Sed0004963 vs. TAIR 10
Match: AT1G08290.1 (WIP domain protein 3 )

HSP 1 Score: 297.4 bits (760), Expect = 1.3e-80
Identity = 124/168 (73.81%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 101 YWIPSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLR 160
           +WIPSPAQI VGP QF+CS+C+KTFNRYNNMQMHMWGHGS++RKG +SL+G+   +++LR
Sbjct: 165 FWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILR 224

Query: 161 LPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTCRKCGKPFAVRGDWRTHE 220
           LPCYCCAEGCKNNI+HPRS+PLKDFRTLQTHYKRKHG+KPF+C KCGK  AV+GDWRTHE
Sbjct: 225 LPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHE 284

Query: 221 KNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVEDDDDD 269
           KNCGKLW+C CGSDFKHKRSLKDH+R+FG GH+PH   + +  ++D +
Sbjct: 285 KNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEEDTE 332

[Close]

BLAST of Sed0004963 vs. TAIR 10
Match: AT3G57670.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 296.6 bits (758), Expect = 2.2e-80
Identity = 150/262 (57.25%), Postives = 186/262 (70.99%), Query Frame = 0


Query: 29  SIFLSLSPPGQQQQQQRPRYSISTSTSK---HHKQT--KQNPNQDPTAAASSAVTVAMHI 88
           ++ + L  P  Q+       S S+S+S+   HH+    K++ + + +  A          
Sbjct: 125 ALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGGGEDDDED 184

Query: 89  ALPNSLSAAAARPVEPHYWIPSPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSQYR 148
           ++        +R  +  YWIP+P+QIL+GPTQFSC VC KTFNRYNNMQMHMWGHGSQYR
Sbjct: 185 SVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYR 244

Query: 149 KGPESLRGSKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFTC 208
           KGPESLRG++P + MLRLPCYCCA GC+NNIDHPR++PLKDFRTLQTHYKRKHG KPF C
Sbjct: 245 KGPESLRGTQP-TGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMC 304

Query: 209 RKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVE 268
           RKCGK FAVRGDWRTHEKNCGKLW+CICGSDFKHKRSLKDH++AFG+GH  + +      
Sbjct: 305 RKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGI------ 364

Query: 269 DDDDDDDDDNWDNREGRDDHHE 286
            D  D++D+     E  D+ HE
Sbjct: 365 -DGFDEEDEPASEVEQLDNDHE 378

The following BLAST results are available for this feature:

BLAST of Sed0004963 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875923.1	1.4e-124	76.74	zinc finger protein WIP6-like [Benincasa hispida]	[more]
XP_022155206.1	4.5e-123	74.59	zinc finger protein WIP6 [Momordica charantia]	[more]
XP_022973621.1	3.6e-120	73.25	zinc finger protein WIP6-like [Cucurbita maxima]	[more]
XP_023546764.1	6.1e-120	72.41	zinc finger protein WIP6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546...	[more]
KAG6601746.1	7.9e-120	73.33	Zinc finger protein WIP6, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0004963 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FX68	5.4e-95	62.02	Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1	[more]
Q8W030	1.2e-81	75.72	Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1	[more]
Q8W031	6.4e-80	62.83	Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1	[more]
Q9SGD1	1.9e-79	73.81	Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1	[more]
Q9SVY1	3.2e-79	57.25	Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1	[more]

BLAST of Sed0004963 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DR05	2.2e-123	74.59	zinc finger protein WIP6 OS=Momordica charantia OX=3673 GN=LOC111022346 PE=3 SV=...	[more]
A0A6J1I950	1.7e-120	73.25	zinc finger protein WIP6-like OS=Cucurbita maxima OX=3661 GN=LOC111472204 PE=3 S...	[more]
A0A0A0KQ06	3.6e-118	73.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G365160 PE=3 SV=1	[more]
A0A6J1EW22	1.8e-117	72.29	zinc finger protein WIP6-like OS=Cucurbita moschata OX=3662 GN=LOC111436584 PE=3...	[more]
A0A5A7VHR3	6.8e-117	72.85	Zinc finger protein WIP6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Sed0004963 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13290.1	3.8e-96	62.02	C2H2-like zinc finger protein	[more]
AT3G20880.1	8.2e-83	75.72	WIP domain protein 4	[more]
AT1G51220.1	4.5e-81	62.83	WIP domain protein 5	[more]
AT1G08290.1	1.3e-80	73.81	WIP domain protein 3	[more]
AT3G57670.1	2.2e-80	57.25	C2H2-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 201..221 e-value: 55.0 score: 6.7 coord: 116..138 e-value: 0.24 score: 20.4 coord: 164..196 e-value: 200.0 score: 1.7
IPR013087	Zinc finger C2H2-type	PFAM	PF00096	zf-C2H2	coord: 116..135 e-value: 0.0095 score: 16.3
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 118..138
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 116..143 score: 10.075962
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 115..138 e-value: 4.6E-5 score: 25.2
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 199..270 e-value: 7.9E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..74
None	No IPR available	PANTHER	PTHR45878:SF25	ZINC FINGER PROTEIN WIP6	coord: 8..285
IPR043584	Zinc finger protein WIP	PANTHER	PTHR45878	ZINC FINGER PROTEIN WIP2	coord: 8..285
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 112..138
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 184..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004963.1	Sed0004963.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity