Sed0004874 (gene) Chayote v1

Overview


Name	Sed0004874
Type	gene
Organism	Sechium edule (Chayote v1)
Description	thioredoxin H2-like
Location	LG08: 28144272 .. 28146263 (+)
RNA-Seq Expression	Sed0004874
Synteny	Sed0004874

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAAGTCTCTCCTTTTATGAAATTATTGGACACAAAATTAAGAGTTTATATTGTCTATGGTTCAAAACTGAAGTCCTACCCGAGACAGTCCAATGAGAACAAAATTACTTAAAAATCCTTTTTCATTTTGATTTAGAGGAAGAGCGTCAAAAATGGGAGTTCTTCTCTCCAGGATCGGAACTCTTCTTTCTAACTGGTTCGGCCCCTCAACGGCGGCCGCCGAACCTCCCTCATCGGAGCCGCCGTCTGTGTTGTCTTTTCACTCACCGCCCCGATGGCAACTCCACTTCAATTCCGCTCAGGAATCCTCCAAGCTTGTAAGCCTCAATTTTACCTTCAACGGACCTTTTTTTTTCTTTCTAGGGTTACTGTTTTCAATTCCATTCCTCATCTGATTTCTATCTCTTCGTTGAATTTGTTGGACTTTGGGAGAGTAGATGGTCATTGATTTCTCCGCGACTTGGTGTGGACCATGCAGGCTCATGGAGCCGTCCTTCAACGCCATGGCCACCAAGTACACCGATGTTCAGTTCGTCAAAATCGACGTCGATGAATTATCTGTATGTCTTTCTCCTTCCAATTCTTTTGCATCCCCTTATTTCTCTGTATCAGATTCTTAATTGCAGTTGTAGCTAATTGTACATTTTGGTGGTTCATGTTAGGGTCTCTGTTGTTCTAATTATGTATTTTTGTTCGTAAATGTTTAGATGTTCTGTTAGTACCTAGTATGCATAAGCTTGAAAGAGGAATAAGGCTTATAAGAGAGGAAAATTCTCTCTTTCACACTATCATGGATTGACCTAGTGGTAAAAAAGGTCCTTCAATAATGAAGTGACAATGAGTTCAATCATATTTCAAGCTTAAAACAGGATTAAGGCATATAAGAGAGGAAATATTTGCTCTTTCAAAACATAGAGGATTGACCTAGGGGTCAAAAAGGGCCTTTAGTAATTAAGAGGTGATGAGTTCAATCCTATCTAGTAATTATTTCCTACGAGTTTCCTTGACATACGAGTTTCCTTGACATCCAAATGTTGTAGGGTCAGGACACCCTATGTTCCATAGGAATAGTCAAAATGTGTGTAAGTTGGCCCGAACATTCACATTTCGCTGATATAAAAAAAGCTCTTTTTTCCAATTTCATAGAAACTTGGAGTAGAAATAAGAAGTGCTCAAGGGGCGGCTTTATAGGTTGAGGCTTGATGCTTTAAAGGCATGCTTTCTTCTGGGCTCGAACCTCTTGGAGTTCTTAGGTTCGAGTCCCACGAGTGAGTTTAATCGTAAAATCCATTGTTGTCTCCCGAGAACCTTTCCTCTTTTAATAGGTTTGATATAATCTAAGTTTATCAATAGCCAAGACTAGTATTGGCTTACAGAAATGGTAGAAAAGAAAATTGTTGCCATCCTAATATAGCTCAGCTCATAACTCAACTGGCTAAGACTAGTTATCATCAACTAAAACTAAAAGGTAAGGTTAGAGATTTGAACTTCCTCTCAACAGGTCTATGAGTTCAAGAACAAGAATAATGTTAAAACATAAGTAAGTAATTTGAAGTTTTTTGTTATGGATTGAACTTTGAAGTGAAAAAATGACTCAAAACATACATTTAGTGAATCTAATTTCAAGAATGACATTAGCGTTTCTGGAATCAGGATGTGGCTCAGGATTTTAGAGTACAAGCAATGCCAACATTTGTGTTGCTGAGGAGAGGGAAAGTTTTGGATACGGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGCTTGAACTTAAATAAAAAACCCCCCCAACAATTACAATAAGTTCTCTCTTTCTTACGCTTCTTCCTCTTTTTTATGTAAACATGTGAAAATTATCTAGATTTAATGTTGCCAGAGATTTGAATTTACATATGTTATATAAACACAATCCTTGTTCTTATCTATCTTCTCTTTTCTGTAAGATATATATACCCATTGTTTGCC

mRNA sequence

GTTAAGTCTCTCCTTTTATGAAATTATTGGACACAAAATTAAGAGTTTATATTGTCTATGGTTCAAAACTGAAGTCCTACCCGAGACAGTCCAATGAGAACAAAATTACTTAAAAATCCTTTTTCATTTTGATTTAGAGGAAGAGCGTCAAAAATGGGAGTTCTTCTCTCCAGGATCGGAACTCTTCTTTCTAACTGGTTCGGCCCCTCAACGGCGGCCGCCGAACCTCCCTCATCGGAGCCGCCGTCTGTGTTGTCTTTTCACTCACCGCCCCGATGGCAACTCCACTTCAATTCCGCTCAGGAATCCTCCAAGCTTATGGTCATTGATTTCTCCGCGACTTGGTGTGGACCATGCAGGCTCATGGAGCCGTCCTTCAACGCCATGGCCACCAAGTACACCGATGTTCAGTTCGTCAAAATCGACGTCGATGAATTATCTGATGTGGCTCAGGATTTTAGAGTACAAGCAATGCCAACATTTGTGTTGCTGAGGAGAGGGAAAGTTTTGGATACGGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGCTTGAACTTAAATAAAAAACCCCCCCAACAATTACAATAAGTTCTCTCTTTCTTACGCTTCTTCCTCTTTTTTATGTAAACATGTGAAAATTATCTAGATTTAATGTTGCCAGAGATTTGAATTTACATATGTTATATAAACACAATCCTTGTTCTTATCTATCTTCTCTTTTCTGTAAGATATATATACCCATTGTTTGCC

Coding sequence (CDS)

ATGGGAGTTCTTCTCTCCAGGATCGGAACTCTTCTTTCTAACTGGTTCGGCCCCTCAACGGCGGCCGCCGAACCTCCCTCATCGGAGCCGCCGTCTGTGTTGTCTTTTCACTCACCGCCCCGATGGCAACTCCACTTCAATTCCGCTCAGGAATCCTCCAAGCTTATGGTCATTGATTTCTCCGCGACTTGGTGTGGACCATGCAGGCTCATGGAGCCGTCCTTCAACGCCATGGCCACCAAGTACACCGATGTTCAGTTCGTCAAAATCGACGTCGATGAATTATCTGATGTGGCTCAGGATTTTAGAGTACAAGCAATGCCAACATTTGTGTTGCTGAGGAGAGGGAAAGTTTTGGATACGGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGCTTGA

Protein sequence

MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASA

Homology

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BLAST of Sed0004874 vs. NCBI nr
Match: XP_038903635.1 (thioredoxin H2 [Benincasa hispida])

HSP 1 Score: 252.7 bits (644), Expect = 1.9e-63
Identity = 126/141 (89.36%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDF 60
           MGVLLSRIG LLSNWFGP TA+AE  SSEP SVLSFHS  RWQLH+NSAQESSKLMVIDF
Sbjct: 1   MGVLLSRIGVLLSNWFGPPTASAEAASSEPSSVLSFHSSARWQLHYNSAQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDV+FVKIDVDELSDVAQ F VQAMPTFVLLR+GKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQHFGVQAMPTFVLLRKGKVVD 120

Query: 121 TVVGARKEELEKKIQKHRSAS 142
           TVVGARKEELEKKIQKHRSAS
Sbjct: 121 TVVGARKEELEKKIQKHRSAS 141

[Close]

BLAST of Sed0004874 vs. NCBI nr
Match: XP_022934421.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023527983.1 thioredoxin H2-like [Cucurbita pepo subsp. pepo] >KAG7017722.1 Thioredoxin H2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.8 bits (634), Expect = 2.8e-62
Identity = 123/138 (89.13%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDF 60
           MGVLLS+IG LLSNWFGPSTA AE  SSEP SVLSFHS  RWQLHFNSA+ESSKLMVIDF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDV+FVKIDVDELSDVAQ+F VQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Sed0004874 vs. NCBI nr
Match: KAG6580981.1 (Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248.4 bits (633), Expect = 3.6e-62
Identity = 123/138 (89.13%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDF 60
           MGVLLS+IG LLSNWFGPSTA AE  SSEP SVLSFHS  RWQLHFNSA+ESSKLMVIDF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDVSSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDV+FVKIDVDELSDVAQ+F VQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Sed0004874 vs. NCBI nr
Match: XP_022983881.1 (thioredoxin H2-like [Cucurbita maxima])

HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61
Identity = 122/138 (88.41%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDF 60
           MGVLLS+IG LLSNW GPSTA AE  SSEP SVLSFHS  RWQLHFNSA+ESSKLMVIDF
Sbjct: 1   MGVLLSKIGALLSNWIGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDV+FVKIDVDELSDVAQ+F VQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Sed0004874 vs. NCBI nr
Match: XP_022928736.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023531187.1 thioredoxin H2-like isoform X3 [Cucurbita pepo subsp. pepo] >KAG6588389.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022236.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.4 bits (625), Expect = 3.0e-61
Identity = 122/141 (86.52%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDF 60
           MGVL S IGTL+S WFGPSTA+AE  SSEP SV SFHS  RW+LHF+S QESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+ YTDV+F+KIDVDELSDVAQDF VQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSAS 142
           TVVGARKEELEKKIQKHRSAS
Sbjct: 121 TVVGARKEELEKKIQKHRSAS 141

[Close]

BLAST of Sed0004874 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 7.6e-39
Identity = 77/133 (57.89%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 8   IGTLLSNWFGP-STAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDFSATWCG 67
           +G  LS  FG    A A    SEP  VL F S  RWQLHFN  +ES+KL+V+DFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR++EP+ +AMA K+ DV FVK+DVDEL DVA++F V AMPTFVL++RGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIQKHRS 140
           K+ELEKK+ K R+
Sbjct: 121 KDELEKKVSKLRA 133

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BLAST of Sed0004874 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 62/127 (48.82%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 19  STAAAEPPSSE---PPSVLSFHSPPRWQLHFNSAQESSKLMVIDFSATWCGPCRLMEPSF 78
           ST+  +P + E     +V++ HS  +W   +++ + ++KL+VIDFSA+WCGPC++MEP F
Sbjct: 6   STSKPKPAAGEEGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVF 65

Query: 79  NAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQ 138
             MA ++TDV F+K+DVDEL++VA+ +RV+AMPTFVL R G+ +  +VGA K+ELEK I 
Sbjct: 66  KEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDELEKTIN 125

Query: 139 KHRSASA 143
             RS+S+
Sbjct: 126 TLRSSSS 132

[Close]

BLAST of Sed0004874 vs. ExPASy Swiss-Prot
Match: Q851R5 (Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.5e-28
Identity = 64/136 (47.06%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 8   IGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQES-SKLMVIDFSATWCG 67
           +G+  S  F P  AA +   S    V++ HS   W   + + + + +KL+VIDFSATWCG
Sbjct: 1   MGSFFSTMFTPPPAADDGGDSR---VVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCG 60

Query: 68  PCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR +EP+F  MA ++ D  F KIDVDELS+VA+ ++V+AMPTFVL++ GK +  VVGA+
Sbjct: 61  PCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGGKEVSRVVGAK 120

Query: 128 KEELEKKIQKHRSASA 143
           K+ELE+K+    S+S+
Sbjct: 121 KDELERKVNMFISSSS 133

[Close]

BLAST of Sed0004874 vs. ExPASy Swiss-Prot
Match: Q42403 (Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 54/110 (49.09%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 33  VLSFHSPPRWQLHFNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMATKYTDVQFVKIDV 92
           V++ H+   W     +A ES KL+VIDF+ATWC PCR + P F  +A K+ DV F K+DV
Sbjct: 7   VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDV 66

Query: 93  DELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASA 143
           DEL+ VA++F+VQAMPTF+ ++ G++ +TVVGA KEE+   ++KH++  A
Sbjct: 67  DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVA 116

[Close]

BLAST of Sed0004874 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 33  VLSFHSPPRWQLHFNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMATKYTDVQFVKIDV 92
           V++ H+   W      A ES KL+VIDF+A+WC PCR + P F  MA K+T+V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 93  DELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           DEL  VAQ+F+V+AMPTFV ++ G ++D VVGA K+E+ +K+ KH
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Sed0004874 vs. ExPASy TrEMBL
Match: A0A6J1F1R9 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62
Identity = 123/138 (89.13%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDF 60
           MGVLLS+IG LLSNWFGPSTA AE  SSEP SVLSFHS  RWQLHFNSA+ESSKLMVIDF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDV+FVKIDVDELSDVAQ+F VQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Sed0004874 vs. ExPASy TrEMBL
Match: A0A6J1J3L5 (thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111482363 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.6e-62
Identity = 122/138 (88.41%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDF 60
           MGVLLS+IG LLSNW GPSTA AE  SSEP SVLSFHS  RWQLHFNSA+ESSKLMVIDF
Sbjct: 1   MGVLLSKIGALLSNWIGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDV+FVKIDVDELSDVAQ+F VQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Sed0004874 vs. ExPASy TrEMBL
Match: A0A6J1EL53 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61
Identity = 122/141 (86.52%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDF 60
           MGVL S IGTL+S WFGPSTA+AE  SSEP SV SFHS  RW+LHF+S QESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+ YTDV+F+KIDVDELSDVAQDF VQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSAS 142
           TVVGARKEELEKKIQKHRSAS
Sbjct: 121 TVVGARKEELEKKIQKHRSAS 141

[Close]

BLAST of Sed0004874 vs. ExPASy TrEMBL
Match: A0A6J1I8S1 (thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111470205 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.3e-61
Identity = 122/141 (86.52%), Postives = 128/141 (90.78%), Query Frame = 0


Query: 1   MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDF 60
           MGVL S IGTLLS WFGPS A+AE  SSEP SV SFHS  RW+LHF+S QESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLLSKWFGPSMASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+ YTDV+F+KIDVDELSDVAQDF VQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSAS 142
           TVVGARKEELEKKIQKHRSAS
Sbjct: 121 TVVGARKEELEKKIQKHRSAS 141

[Close]

BLAST of Sed0004874 vs. ExPASy TrEMBL
Match: A0A5D3DQ11 (Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008280 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60
Identity = 119/141 (84.40%), Postives = 127/141 (90.07%), Query Frame = 0


Query: 1   MGVLLSRIGTLLSNWFGPSTAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDF 60
           MGVLLSRIG LLSNWFGP TAAAE  SSEP SV SFHS  RWQLHFNS QE+SKLMVIDF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTAAAEAASSEPSSVQSFHSSARWQLHFNSVQETSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEP+FNAMA+KYTDV+F KIDVDEL+DVAQ F VQAMPTFV L+RGKV+D
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELADVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHRSAS 142
           TVVGARKEELEKKI+KHRS S
Sbjct: 121 TVVGARKEELEKKIEKHRSVS 141

[Close]

BLAST of Sed0004874 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 161.4 bits (407), Expect = 5.4e-40
Identity = 77/133 (57.89%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 8   IGTLLSNWFGP-STAAAEPPSSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDFSATWCG 67
           +G  LS  FG    A A    SEP  VL F S  RWQLHFN  +ES+KL+V+DFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPSFNAMATKYTDVQFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR++EP+ +AMA K+ DV FVK+DVDEL DVA++F V AMPTFVL++RGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIQKHRS 140
           K+ELEKK+ K R+
Sbjct: 121 KDELEKKVSKLRA 133

[Close]

BLAST of Sed0004874 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 120.9 bits (302), Expect = 8.1e-28
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 33  VLSFHSPPRWQLHFNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMATKYTDVQFVKIDV 92
           V++ H+   W      A ES KL+VIDF+A+WC PCR + P F  MA K+T+V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 93  DELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           DEL  VAQ+F+V+AMPTFV ++ G ++D VVGA K+E+ +K+ KH
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Sed0004874 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 120.9 bits (302), Expect = 8.1e-28
Identity = 54/110 (49.09%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 33  VLSFHSPPRWQLHFNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMATKYTDVQFVKIDV 92
           V++ H+   W     +A ES KL+VIDF+ATWC PCR + P F  +A K+ DV F K+DV
Sbjct: 7   VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDV 66

Query: 93  DELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASA 143
           DEL+ VA++F+VQAMPTF+ ++ G++ +TVVGA KEE+   ++KH++  A
Sbjct: 67  DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVA 116

[Close]

BLAST of Sed0004874 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-27
Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 27  SSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMATKYTDVQ 86
           +SE   V++ H+   W      A ES  L+V+DF+A+WCGPCR + P F  +A K  +V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 87  FVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           F+K+D DEL  VA D+ +QAMPTF+ L+ GK+LD VVGA+K+EL+  I KH
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Sed0004874 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-26
Identity = 54/112 (48.21%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 27  SSEPPSVLSFHSPPRWQLHFNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMATKY-TDV 86
           ++E   V+  H+   W +  + A+ES+KL+VIDF+A+WC PCR++ P FN +A K+ +  
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 87  QFVKIDVDELSDVAQDFRVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
            F K+DVDEL  VA++F V+AMPTFV ++ G+V+D +VGA KE+L+ KI KH
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

The following BLAST results are available for this feature:

BLAST of Sed0004874 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903635.1	1.9e-63	89.36	thioredoxin H2 [Benincasa hispida]	[more]
XP_022934421.1	2.8e-62	89.13	thioredoxin H2-like [Cucurbita moschata] >XP_023527983.1 thioredoxin H2-like [Cu...	[more]
KAG6580981.1	3.6e-62	89.13	Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022983881.1	1.4e-61	88.41	thioredoxin H2-like [Cucurbita maxima]	[more]
XP_022928736.1	3.0e-61	86.52	thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like iso...	[more]

BLAST of Sed0004874 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38879	7.6e-39	57.89	Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2	[more]
Q6Z4I3	1.6e-28	48.82	Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 S...	[more]
Q851R5	3.5e-28	47.06	Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 S...	[more]
Q42403	1.1e-26	49.09	Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1	[more]
Q39241	1.1e-26	52.38	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]

BLAST of Sed0004874 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1R9	1.3e-62	89.13	thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1	[more]
A0A6J1J3L5	6.6e-62	88.41	thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111482363 PE=4 SV=1	[more]
A0A6J1EL53	1.5e-61	86.52	thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1	[more]
A0A6J1I8S1	3.3e-61	86.52	thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111470205 PE=4 SV=1	[more]
A0A5D3DQ11	1.6e-60	84.40	Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00828...	[more]

BLAST of Sed0004874 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39950.1	5.4e-40	57.89	thioredoxin 2	[more]
AT1G45145.1	8.1e-28	52.38	thioredoxin H-type 5	[more]
AT5G42980.1	8.1e-28	49.09	thioredoxin 3	[more]
AT3G51030.1	1.8e-27	48.65	thioredoxin H-type 1	[more]
AT1G19730.1	2.0e-26	48.21	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 64..73 score: 58.06 coord: 103..114 score: 32.59 coord: 56..64 score: 45.12
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 20..141 e-value: 1.0E-37 score: 130.8
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 9..140
None	No IPR available	PANTHER	PTHR10438:SF413	THIOREDOXIN H2	coord: 9..140
None	No IPR available	CDD	cd02947	TRX_family	coord: 45..135 e-value: 8.82419E-40 score: 126.904
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 49..136 e-value: 9.7E-28 score: 96.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 18..139 score: 14.652839
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 57..75
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 26..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004874.1	Sed0004874.1	mRNA