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Sed0004832 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTTCTGCCAAAATCAAAATCTCTGTATTTGAAGAACTTTGTGAAAAAAAAAAAAAAATTAAGAGAGAGAAAAATGTGCGGTGGCGCAATGATCTCAGGTTTTAGTGAAAAAAAGCGGACTCGGATGCTTAACAATGGATCTCTTCGGCCCGAAACCGACCCGTTTTCCGATCTACTCTCCTATGATTTTTCCTCTGGTATTTTTCTTTTCCTTTCATTTCAACTTTTTTTTTTTCTTTATTTTTTGTTACTCTATTCGGATTAATTACAACAAAATTCCAAAATTATATGCATATTTGTTTATACCATTATTTTTCATTTGTTTAGATGTTATTATAATCGAGAGCCAATTGTGCAGTTGATTATATCCTCTAGTGTTAATCTATTTCAATTTTATGATCATGAGTTTGAGTTCGGAAATCGATATTAATAAACTATGTTATTATAAACAAGAACATTTTTAAAAGGTAAGTTATTATAAAAGGGTGCTTGTTTCTCTAATTTAGAGAAAATTTAGATTGAATATTTATTTATTTTTTCTCAAAAAGATTACCTCCAAACCATTTATTGTAAGAATTTAAAAGAATTATTTATTTTTATTACTTAAAATAACTATTCATATTCAGAATAATTACTTATTTTTAAGGTTTATTTTTTGTTATTCATTTTTCAACTACTTTGTTTCAAATTTACATCCAATCAAAAGTTCAAAAAAAAAATAAAAATATCCTATAAAGTTTTTGGCACACAACTATTCCACAAAAAAATTATATCCAAACCAGAATTATAAAATTCTCAATTTTATAATTTAATATTTGTCAGATACAAAATATTATTAATAACAGAGATTGTATAATAAACAATTGGAATTCAAGTTATTATAATTTTTATACACTATTTTTAATGATTACAATTGAAATTATGACAATCAACCGTCCAAGGGTTACCAAACAAACAGTCTTTTGGTGCAGAATAAAAATTATAAACATTTCTGAAGAAAGATCTATTTTTTAAATGATAAGTCAGACTTTTGTTTCAAGTGTGTTTATTTTTGGTAGAAGAGTAAGAGTGTTTTTGGGCTCATTTATATAATTGATCGGTTAATTATAATAATTCAATCGATGCTTGTTCTTTATAAATGGTGGTTATTTAAATTTGAGTGTCCTTTTATGTAAACTTACATGTCATTTATCTAAATCTTATATATATATATATTATTTTTTGTTACATAATCGATCTCTCAAACACCGTTTATCATAATCTATATTAAAATAACTTACTCTCGAATACCATTTATAATAATTCATCCTTTATTATAGACTTTCATCTATTATAATCAAATCGGTACTTTAAACACATTCTAATAATTGTTGAAGGTGGTTATAATTTTGATGTGAAATTTAATAAAATATATTGTGATATTTGAGAGACATGTTGAGTATTGGTTAATAGTATTTGTTCATATTTTATTAAATAGATTTTTACAAAAATGTCTTTTTTTTTCAAATGGTAATTTCTAGTGGGAACAGAAATTTCGATCGTGGTGGGTAAATTGAGAACCGTAATTGGTCGCTTTTTTGCAGTAAAAAATGAGAACCCACAGAAAAGAAACAGAGCCACGGCGGAGGTAGCGGCGGCGCCGCCACCGGAAAAGTCTAAAAAACCTCGAAAAAACATATACAGAGGAATCCGGCAGCGGCCGTGGGGGAAATGGGCGGCGGAGATACGGGACCCACATAAAGGGGTCCGAGTTTGGCTCGGCACGTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCCGCCAAACGGATCCGAGGAGAAAAAGCCAAACTCAATTTCGCTCCTCCGCCGGCTGAGCCGCCGTCTACGGCGGCTCAGGCTCAATTTCCGGTAAAAAATCGGTGTTTTCTCCCCGATCCGCCGCCGTCGGGTGCACGTGCGAGTAACACGTGTGAGAGCGATGGGGTTTGCTACGGCGAGGAATTGGCGAGTTTGAGGTCGTTTTTGGGTTTGGATTTTGAAGAGCAACAGCCGAGTCAAATCGGTGGAAAGGACGAGTTTGACCGAGTTGCGGACCTTTGGATGACGGACGACATGTCGGTGAATCAAGAGTCATTCAGTCAACGGGTTTGACTGAGATTGACGGTTTTGTCCGACATGTCGTTTAATGCTAGTAATGTTTTTATGTTTATTGTACATATATATTATGTATGGATAGTTTCAATACAAGGTAAGCCATATGTATGTCACTTGTTGCGTTTTTTGTCTCTTAGGAACGACATGTCGGTTCGTTTATTATCATTTATCATAATGTTTTTAATATTCACCGCTTTTGAAAATGGTCTTTTTGTGTGTTGACTCTTTTTTATGACATGTAATGTTAACCCTTTTCTTTGTCGTCTCGC GCTTCTGCCAAAATCAAAATCTCTGTATTTGAAGAACTTTGTGAAAAAAAAAAAAAAATTAAGAGAGAGAAAAATGTGCGGTGGCGCAATGATCTCAGGTTTTAGTGAAAAAAAGCGGACTCGGATGCTTAACAATGGATCTCTTCGGCCCGAAACCGACCCGTTTTCCGATCTACTCTCCTATGATTTTTCCTCTGTAAAAAATGAGAACCCACAGAAAAGAAACAGAGCCACGGCGGAGGTAGCGGCGGCGCCGCCACCGGAAAAGTCTAAAAAACCTCGAAAAAACATATACAGAGGAATCCGGCAGCGGCCGTGGGGGAAATGGGCGGCGGAGATACGGGACCCACATAAAGGGGTCCGAGTTTGGCTCGGCACGTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCCGCCAAACGGATCCGAGGAGAAAAAGCCAAACTCAATTTCGCTCCTCCGCCGGCTGAGCCGCCGTCTACGGCGGCTCAGGCTCAATTTCCGGTAAAAAATCGGTGTTTTCTCCCCGATCCGCCGCCGTCGGGTGCACGTGCGAGTAACACGTGTGAGAGCGATGGGGTTTGCTACGGCGAGGAATTGGCGAGTTTGAGGTCGTTTTTGGGTTTGGATTTTGAAGAGCAACAGCCGAGTCAAATCGGTGGAAAGGACGAGTTTGACCGAGTTGCGGACCTTTGGATGACGGACGACATGTCGGTGAATCAAGAGTCATTCAGTCAACGGGTTTGACTGAGATTGACGGTTTTGTCCGACATGTCGTTTAATGCTAGTAATGTTTTTATGTTTATTGTACATATATATTATGTATGGATAGTTTCAATACAAGGTAAGCCATATGTATGTCACTTGTTGCGTTTTTTGTCTCTTAGGAACGACATGTCGGTTCGTTTATTATCATTTATCATAATGTTTTTAATATTCACCGCTTTTGAAAATGGTCTTTTTGTGTGTTGACTCTTTTTTATGACATGTAATGTTAACCCTTTTCTTTGTCGTCTCGC ATGTGCGGTGGCGCAATGATCTCAGGTTTTAGTGAAAAAAAGCGGACTCGGATGCTTAACAATGGATCTCTTCGGCCCGAAACCGACCCGTTTTCCGATCTACTCTCCTATGATTTTTCCTCTGTAAAAAATGAGAACCCACAGAAAAGAAACAGAGCCACGGCGGAGGTAGCGGCGGCGCCGCCACCGGAAAAGTCTAAAAAACCTCGAAAAAACATATACAGAGGAATCCGGCAGCGGCCGTGGGGGAAATGGGCGGCGGAGATACGGGACCCACATAAAGGGGTCCGAGTTTGGCTCGGCACGTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCCGCCAAACGGATCCGAGGAGAAAAAGCCAAACTCAATTTCGCTCCTCCGCCGGCTGAGCCGCCGTCTACGGCGGCTCAGGCTCAATTTCCGGTAAAAAATCGGTGTTTTCTCCCCGATCCGCCGCCGTCGGGTGCACGTGCGAGTAACACGTGTGAGAGCGATGGGGTTTGCTACGGCGAGGAATTGGCGAGTTTGAGGTCGTTTTTGGGTTTGGATTTTGAAGAGCAACAGCCGAGTCAAATCGGTGGAAAGGACGAGTTTGACCGAGTTGCGGACCTTTGGATGACGGACGACATGTCGGTGAATCAAGAGTCATTCAGTCAACGGGTTTGA MCGGAMISGFSEKKRTRMLNNGSLRPETDPFSDLLSYDFSSVKNENPQKRNRATAEVAAAPPPEKSKKPRKNIYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPPPAEPPSTAAQAQFPVKNRCFLPDPPPSGARASNTCESDGVCYGEELASLRSFLGLDFEEQQPSQIGGKDEFDRVADLWMTDDMSVNQESFSQRV Homology
BLAST of Sed0004832 vs. NCBI nr
Match: XP_023000151.1 (ethylene-responsive transcription factor RAP2-3 [Cucurbita maxima]) HSP 1 Score: 298.9 bits (764), Expect = 3.7e-77 Identity = 159/237 (67.09%), Postives = 178/237 (75.11%), Query Frame = 0
BLAST of Sed0004832 vs. NCBI nr
Match: XP_008458405.1 (PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis melo]) HSP 1 Score: 298.1 bits (762), Expect = 6.3e-77 Identity = 159/236 (67.37%), Postives = 180/236 (76.27%), Query Frame = 0
BLAST of Sed0004832 vs. NCBI nr
Match: KGN47418.1 (hypothetical protein Csa_023005 [Cucumis sativus]) HSP 1 Score: 297.0 bits (759), Expect = 1.4e-76 Identity = 160/236 (67.80%), Postives = 182/236 (77.12%), Query Frame = 0
BLAST of Sed0004832 vs. NCBI nr
Match: XP_004153075.3 (ethylene-responsive transcription factor RAP2-3 [Cucumis sativus]) HSP 1 Score: 297.0 bits (759), Expect = 1.4e-76 Identity = 160/236 (67.80%), Postives = 182/236 (77.12%), Query Frame = 0
BLAST of Sed0004832 vs. NCBI nr
Match: KAG6593985.1 (Ethylene-responsive transcription factor RAP2-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026326.1 Ethylene-responsive transcription factor RAP2-3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 286.2 bits (731), Expect = 2.5e-73 Identity = 151/233 (64.81%), Postives = 174/233 (74.68%), Query Frame = 0
BLAST of Sed0004832 vs. ExPASy Swiss-Prot
Match: P42736 (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 150.6 bits (379), Expect = 2.1e-35 Identity = 109/255 (42.75%), Postives = 134/255 (52.55%), Query Frame = 0
BLAST of Sed0004832 vs. ExPASy Swiss-Prot
Match: Q6K7E6 (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=EREBP1 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 7.6e-25 Identity = 57/80 (71.25%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of Sed0004832 vs. ExPASy Swiss-Prot
Match: Q9SSA8 (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 7.6e-25 Identity = 70/159 (44.03%), Postives = 92/159 (57.86%), Query Frame = 0
BLAST of Sed0004832 vs. ExPASy Swiss-Prot
Match: O22259 (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=1 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.7e-24 Identity = 62/119 (52.10%), Postives = 75/119 (63.03%), Query Frame = 0
BLAST of Sed0004832 vs. ExPASy Swiss-Prot
Match: Q8H0T5 (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 GN=ERF073 PE=1 SV=2) HSP 1 Score: 114.4 bits (285), Expect = 1.7e-24 Identity = 69/133 (51.88%), Postives = 84/133 (63.16%), Query Frame = 0
BLAST of Sed0004832 vs. ExPASy TrEMBL
Match: A0A6J1KF31 (ethylene-responsive transcription factor RAP2-3 OS=Cucurbita maxima OX=3661 GN=LOC111494435 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.8e-77 Identity = 159/237 (67.09%), Postives = 178/237 (75.11%), Query Frame = 0
BLAST of Sed0004832 vs. ExPASy TrEMBL
Match: A0A1S3C7W9 (ethylene-responsive transcription factor RAP2-3-like OS=Cucumis melo OX=3656 GN=LOC103497827 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 3.1e-77 Identity = 159/236 (67.37%), Postives = 180/236 (76.27%), Query Frame = 0
BLAST of Sed0004832 vs. ExPASy TrEMBL
Match: A0A0A0KD18 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318160 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 6.8e-77 Identity = 160/236 (67.80%), Postives = 182/236 (77.12%), Query Frame = 0
BLAST of Sed0004832 vs. ExPASy TrEMBL
Match: A0A6J1ER95 (ethylene-responsive transcription factor RAP2-3 OS=Cucurbita moschata OX=3662 GN=LOC111436844 PE=4 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 7.8e-73 Identity = 149/233 (63.95%), Postives = 173/233 (74.25%), Query Frame = 0
BLAST of Sed0004832 vs. ExPASy TrEMBL
Match: A0A6J1CA63 (ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3673 GN=LOC111009718 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 6.8e-69 Identity = 154/246 (62.60%), Postives = 174/246 (70.73%), Query Frame = 0
BLAST of Sed0004832 vs. TAIR 10
Match: AT3G16770.1 (ethylene-responsive element binding protein ) HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36 Identity = 109/255 (42.75%), Postives = 134/255 (52.55%), Query Frame = 0
BLAST of Sed0004832 vs. TAIR 10
Match: AT1G53910.3 (related to AP2 12 ) HSP 1 Score: 117.9 bits (294), Expect = 1.1e-26 Identity = 71/157 (45.22%), Postives = 92/157 (58.60%), Query Frame = 0
BLAST of Sed0004832 vs. TAIR 10
Match: AT1G53910.1 (related to AP2 12 ) HSP 1 Score: 115.5 bits (288), Expect = 5.4e-26 Identity = 70/159 (44.03%), Postives = 92/159 (57.86%), Query Frame = 0
BLAST of Sed0004832 vs. TAIR 10
Match: AT1G53910.2 (related to AP2 12 ) HSP 1 Score: 115.5 bits (288), Expect = 5.4e-26 Identity = 70/159 (44.03%), Postives = 92/159 (57.86%), Query Frame = 0
BLAST of Sed0004832 vs. TAIR 10
Match: AT1G72360.3 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 114.8 bits (286), Expect = 9.2e-26 Identity = 67/132 (50.76%), Postives = 84/132 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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