Sed0004794 (gene) Chayote v1

Overview


Name	Sed0004794
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Plant protein of unknown function (DUF247)
Location	LG07: 1338264 .. 1339317 (+)
RNA-Seq Expression	Sed0004794
Synteny	Sed0004794

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAAGTACTCGTTGCTTTATCCCAAATTCAAGAGAAAAGACCGGAGTGGTCTATATTTGAACCGCAAAATCTCCCAAAAAATCAGACCCGTAACACGTCTTCACGAAGCCGGGATCCTATTGAAAAGAAGCGAAACAGACAGCCTCACACACGTGTCGTTCGAGCAAGGCGAGTTGACATTGCGGTCGTTAATAGTGGACAACGACACTGAATTTAAGCTGTCAAACGTGATGGCATTCGAAACGCTCCACACAGAAGCCGGCAACGAAGTGACGTCGTTTATCATATTGATGAATAATCTAATAAACGGGAGCCGTGACGTGGCACTACTGGACTACGAGAACATTGTTTTGAATTCGCTCGGGACCGACCAAGATGCGGCCGATATGTTTAGCCGGCTTGGGAGTGGCGTGGTTCTGGGTTTGGATATCCAGATGGTGCAGATGTATGGCATGATTGATGAGCATTGTAATCGGTCGTGGAATAAGTGGTGCGCCAGGTGGAGACATTACTACTTTCGAAACCCTTGGGCTTTGATTTCTTTTTATGCAACTATTTTGATTGTCCAGCTTATCTTTCAGCTACTTGATTATTTTGTCAAGCCCTAATTTGGCTCTTTTTTTTTTTTTAATTTATATATATCTCTATTTTAAAATAGTTGAATAAATTCTGGTTTTTCAAAAGAATCTTAGGAGTCTGTTTTAGACTCTAAACAAAACAAAAGCAGTTGCAAGCAGAAACAGTATTCAGTTGATCAAAGTGTGTTGACTCAACAGACAAACTAATCAGTTTCTACACTTCAGAACCTAAGTATTGCCAACCATTCAAGCTATGCAAACAATTCAGTTAAAATGGTTCTATCCTCCTAAAACAACTATCTAACAAACAACTGGTTAAGCAGTTTTTTATTCAACAGATCAGTCCTAAACTGATCTATAAAAAACGGGGTTGGTGTAGCACAGAATGTAATTTTTTTTTTCCTTTTAAAGGCAGATGAGTGATGGGAGTGTATATACTTGTGCTGTGTGTTCTTTGTCTTTCTCTCTGTAA

mRNA sequence

ATGTACAAGTACTCGTTGCTTTATCCCAAATTCAAGAGAAAAGACCGGAGTGGTCTATATTTGAACCGCAAAATCTCCCAAAAAATCAGACCCGTAACACGTCTTCACGAAGCCGGGATCCTATTGAAAAGAAGCGAAACAGACAGCCTCACACACGTGTCGTTCGAGCAAGGCGAGTTGACATTGCGGTCGTTAATAGTGGACAACGACACTGAATTTAAGCTGTCAAACGTGATGGCATTCGAAACGCTCCACACAGAAGCCGGCAACGAAGTGACGTCGTTTATCATATTGATGAATAATCTAATAAACGGGAGCCGTGACGTGGCACTACTGGACTACGAGAACATTGTTTTGAATTCGCTCGGGACCGACCAAGATGCGGCCGATATGTTTAGCCGGCTTGGGAGTGGCGTGGTTCTGGGTTTGGATATCCAGATGGTGCAGATGTATGGCATGATTGATGAGCATTGTAATCGGTCGTGGAATAAGTGGTGCGCCAGGCAGATGAGTGATGGGAGTGTATATACTTGTGCTGTGTGTTCTTTGTCTTTCTCTCTGTAA

Coding sequence (CDS)

ATGTACAAGTACTCGTTGCTTTATCCCAAATTCAAGAGAAAAGACCGGAGTGGTCTATATTTGAACCGCAAAATCTCCCAAAAAATCAGACCCGTAACACGTCTTCACGAAGCCGGGATCCTATTGAAAAGAAGCGAAACAGACAGCCTCACACACGTGTCGTTCGAGCAAGGCGAGTTGACATTGCGGTCGTTAATAGTGGACAACGACACTGAATTTAAGCTGTCAAACGTGATGGCATTCGAAACGCTCCACACAGAAGCCGGCAACGAAGTGACGTCGTTTATCATATTGATGAATAATCTAATAAACGGGAGCCGTGACGTGGCACTACTGGACTACGAGAACATTGTTTTGAATTCGCTCGGGACCGACCAAGATGCGGCCGATATGTTTAGCCGGCTTGGGAGTGGCGTGGTTCTGGGTTTGGATATCCAGATGGTGCAGATGTATGGCATGATTGATGAGCATTGTAATCGGTCGTGGAATAAGTGGTGCGCCAGGCAGATGAGTGATGGGAGTGTATATACTTGTGCTGTGTGTTCTTTGTCTTTCTCTCTGTAA

Protein sequence

MYKYSLLYPKFKRKDRSGLYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFEQGELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENIVLNSLGTDQDAADMFSRLGSGVVLGLDIQMVQMYGMIDEHCNRSWNKWCARQMSDGSVYTCAVCSLSFSL

Homology

[Close]

BLAST of Sed0004794 vs. NCBI nr
Match: XP_023004238.1 (UPF0481 protein At3g47200-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-36
Identity = 91/175 (52.00%), Postives = 120/175 (68.57%), Query Frame = 0


Query: 1   MYKYSLLYPKFKRKDRSG-LYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFE--Q 60
           MYK SLLYP   R+D S  L  +    Q I P T+LHEAGI  KRS+T+SL  V F+  +
Sbjct: 228 MYKESLLYPPIDRRDWSAELDHSDPECQVIPPATKLHEAGIKFKRSKTESLRDVWFDTKR 287

Query: 61  GELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENI 120
           G L L  L+VD+DTE  + NVMAFE LH +AG +VTSF+ILM+NLI+  RDVA+L  E I
Sbjct: 288 GVLWLPQLMVDDDTESTMLNVMAFEKLHMKAGRKVTSFVILMSNLIDDERDVAVLAGEKI 347

Query: 121 VLNSLGTDQDAADMFSRLGSGVVLGLDIQMVQMYGMIDEHCNRSWNKWCARQMSD 173
           + N++G D++AA +FSRLGSG  +GLD  M  ++ M++ HCN+ WN+ CA    D
Sbjct: 348 LANAVGNDKEAAGLFSRLGSGAAMGLDSHMAGVHKMVNAHCNQPWNERCATLKHD 402

[Close]

BLAST of Sed0004794 vs. NCBI nr
Match: XP_023004239.1 (UPF0481 protein At3g47200-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-36
Identity = 91/175 (52.00%), Postives = 120/175 (68.57%), Query Frame = 0


Query: 1   MYKYSLLYPKFKRKDRSG-LYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFE--Q 60
           MYK SLLYP   R+D S  L  +    Q I P T+LHEAGI  KRS+T+SL  V F+  +
Sbjct: 227 MYKESLLYPPIDRRDWSAELDHSDPECQVIPPATKLHEAGIKFKRSKTESLRDVWFDTKR 286

Query: 61  GELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENI 120
           G L L  L+VD+DTE  + NVMAFE LH +AG +VTSF+ILM+NLI+  RDVA+L  E I
Sbjct: 287 GVLWLPQLMVDDDTESTMLNVMAFEKLHMKAGRKVTSFVILMSNLIDDERDVAVLAGEKI 346

Query: 121 VLNSLGTDQDAADMFSRLGSGVVLGLDIQMVQMYGMIDEHCNRSWNKWCARQMSD 173
           + N++G D++AA +FSRLGSG  +GLD  M  ++ M++ HCN+ WN+ CA    D
Sbjct: 347 LANAVGNDKEAAGLFSRLGSGAAMGLDSHMAGVHKMVNAHCNQPWNERCATLKHD 401

[Close]

BLAST of Sed0004794 vs. NCBI nr
Match: XP_038875622.1 (UPF0481 protein At3g47200-like [Benincasa hispida])

HSP 1 Score: 162.5 bits (410), Expect = 3.4e-36
Identity = 94/193 (48.70%), Postives = 124/193 (64.25%), Query Frame = 0


Query: 1   MYKYSLLYPKFKRKDRSGLYLNRKIS--------QKIRPVTRLHEAGILLKRSETDSLTH 60
           MY+ SLLYP   RKDRSG     K++        Q I   T+LH+AGI  K S T +LT 
Sbjct: 228 MYRASLLYPPVDRKDRSG---KTKVTYQQSDPECQIIPQATQLHDAGIKFKSSPTKNLTD 287

Query: 61  VSF--EQGELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVA 120
           VSF  +QG L L  ++VD+DTE  L NVMAFE L+ EAG++VTSF+ILMNNLI+  RDVA
Sbjct: 288 VSFNPKQGVLELPYIVVDDDTETTLLNVMAFEKLYVEAGSKVTSFVILMNNLIDVDRDVA 347

Query: 121 LLDYENIVLNSLGTDQDAADMFSRLGSGVVLGLDIQMVQMYGMIDEHCNRSWNKWCARQM 180
           LL  + I+ N+LG D+ AAD+FS LG G  + LD  +  ++  +++HC+ SWN+WCA   
Sbjct: 348 LLASDKILANALGNDESAADLFSLLGKGAAMDLDSHITDVHYKVNKHCSLSWNQWCASLK 407

Query: 181 SDGSVYTCAVCSL 184
            D      A+ SL
Sbjct: 408 HDYFQNPWAIISL 417

[Close]

BLAST of Sed0004794 vs. NCBI nr
Match: XP_023513986.1 (UPF0481 protein At3g47200-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-35
Identity = 91/175 (52.00%), Postives = 118/175 (67.43%), Query Frame = 0


Query: 1   MYKYSLLYPKFKRKDRS-GLYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFEQ-- 60
           MYK SLL+P   R D S  L  +   SQ I P T+L EAGI  KRS+TDSLT V F+   
Sbjct: 228 MYKESLLHPPIDRTDWSVELDHSDPESQVIPPATKLREAGIKFKRSKTDSLTDVFFDAKG 287

Query: 61  GELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENI 120
           G L L  L+VD+DTE  L NVMAFE LH +AG  VTSF+ILM+NLI+  RDVA+L  E +
Sbjct: 288 GVLWLPQLMVDDDTESTLLNVMAFEKLHMKAGRRVTSFVILMSNLIDDERDVAVLAGEKV 347

Query: 121 VLNSLGTDQDAADMFSRLGSGVVLGLDIQMVQMYGMIDEHCNRSWNKWCARQMSD 173
           + N++G D++AA +F+RLGSG  +GLD  M  ++  ++EHCN+ WN+ CA    D
Sbjct: 348 LANAVGNDKEAAGLFNRLGSGAAMGLDTHMAGVHKKVNEHCNQPWNERCATLKHD 402

[Close]

BLAST of Sed0004794 vs. NCBI nr
Match: XP_023513987.1 (UPF0481 protein At3g47200-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-35
Identity = 91/175 (52.00%), Postives = 118/175 (67.43%), Query Frame = 0


Query: 1   MYKYSLLYPKFKRKDRS-GLYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFEQ-- 60
           MYK SLL+P   R D S  L  +   SQ I P T+L EAGI  KRS+TDSLT V F+   
Sbjct: 227 MYKESLLHPPIDRTDWSVELDHSDPESQVIPPATKLREAGIKFKRSKTDSLTDVFFDAKG 286

Query: 61  GELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENI 120
           G L L  L+VD+DTE  L NVMAFE LH +AG  VTSF+ILM+NLI+  RDVA+L  E +
Sbjct: 287 GVLWLPQLMVDDDTESTLLNVMAFEKLHMKAGRRVTSFVILMSNLIDDERDVAVLAGEKV 346

Query: 121 VLNSLGTDQDAADMFSRLGSGVVLGLDIQMVQMYGMIDEHCNRSWNKWCARQMSD 173
           + N++G D++AA +F+RLGSG  +GLD  M  ++  ++EHCN+ WN+ CA    D
Sbjct: 347 LANAVGNDKEAAGLFNRLGSGAAMGLDTHMAGVHKKVNEHCNQPWNERCATLKHD 401

[Close]

BLAST of Sed0004794 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.3e-09
Identity = 34/132 (25.76%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 34  RLHEAGILLKRSETDSLTHVSFEQGELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVT 93
           RL      L+RS+ DS+ +V  ++ +L +  L  D        N +AFE  +T++ NE+T
Sbjct: 286 RLQGIKFRLRRSKEDSILNVRLKKNKLQIPQLRFDGFISSFFLNCVAFEQFYTDSSNEIT 345

Query: 94  SFIILMNNLINGSRDVALLDYENIVL-NSLGTDQDAADMFSRLGSGVVLGLDIQMV-QMY 153
           ++I+ M  L+N   DV  L  + +++ N  G++ + ++ F  +   VV  +D   +  ++
Sbjct: 346 TYIVFMGCLLNNEEDVTFLRNDKLIIENHFGSNNEVSEFFKTISKDVVFEVDTSYLNNVF 405

Query: 154 GMIDEHCNRSWN 164
             ++E+  + +N
Sbjct: 406 KGVNEYTKKWYN 417

[Close]

BLAST of Sed0004794 vs. ExPASy Swiss-Prot
Match: P0C897 (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.1e-08
Identity = 35/115 (30.43%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 29  IRPVTRLHEAGILLKRSETDSLTHVSFE--QGELTLRSLIVDNDTEFKLSNVMAFETLHT 88
           I  V+ LH+AG+  K +   +++ V+F+   G+  L  + +D +TE  L N++A+E  +T
Sbjct: 345 IPSVSDLHKAGVRFKPTAHGNISTVTFDSNSGQFYLPVINLDINTETVLRNLVAYEATNT 404

Query: 89  EAGNEVTSFIILMNNLINGSRDVALLDYENIVLNSLGTDQDAADMFSRLGSGVVL 142
                 T +  L+N +I+   DV LL  + ++++ L +DQ+AA+M++ +   V L
Sbjct: 405 SGPLVFTRYTELINGIIDSEEDVRLLREQGVLVSRLKSDQEAAEMWNGMSKSVRL 459

[Close]

BLAST of Sed0004794 vs. ExPASy TrEMBL
Match: A0A6J1KYV8 (UPF0481 protein At3g47200-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497633 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 91/175 (52.00%), Postives = 120/175 (68.57%), Query Frame = 0


Query: 1   MYKYSLLYPKFKRKDRSG-LYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFE--Q 60
           MYK SLLYP   R+D S  L  +    Q I P T+LHEAGI  KRS+T+SL  V F+  +
Sbjct: 228 MYKESLLYPPIDRRDWSAELDHSDPECQVIPPATKLHEAGIKFKRSKTESLRDVWFDTKR 287

Query: 61  GELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENI 120
           G L L  L+VD+DTE  + NVMAFE LH +AG +VTSF+ILM+NLI+  RDVA+L  E I
Sbjct: 288 GVLWLPQLMVDDDTESTMLNVMAFEKLHMKAGRKVTSFVILMSNLIDDERDVAVLAGEKI 347

Query: 121 VLNSLGTDQDAADMFSRLGSGVVLGLDIQMVQMYGMIDEHCNRSWNKWCARQMSD 173
           + N++G D++AA +FSRLGSG  +GLD  M  ++ M++ HCN+ WN+ CA    D
Sbjct: 348 LANAVGNDKEAAGLFSRLGSGAAMGLDSHMAGVHKMVNAHCNQPWNERCATLKHD 402

[Close]

BLAST of Sed0004794 vs. ExPASy TrEMBL
Match: A0A6J1KVQ6 (UPF0481 protein At3g47200-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497633 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 91/175 (52.00%), Postives = 120/175 (68.57%), Query Frame = 0


Query: 1   MYKYSLLYPKFKRKDRSG-LYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFE--Q 60
           MYK SLLYP   R+D S  L  +    Q I P T+LHEAGI  KRS+T+SL  V F+  +
Sbjct: 227 MYKESLLYPPIDRRDWSAELDHSDPECQVIPPATKLHEAGIKFKRSKTESLRDVWFDTKR 286

Query: 61  GELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENI 120
           G L L  L+VD+DTE  + NVMAFE LH +AG +VTSF+ILM+NLI+  RDVA+L  E I
Sbjct: 287 GVLWLPQLMVDDDTESTMLNVMAFEKLHMKAGRKVTSFVILMSNLIDDERDVAVLAGEKI 346

Query: 121 VLNSLGTDQDAADMFSRLGSGVVLGLDIQMVQMYGMIDEHCNRSWNKWCARQMSD 173
           + N++G D++AA +FSRLGSG  +GLD  M  ++ M++ HCN+ WN+ CA    D
Sbjct: 347 LANAVGNDKEAAGLFSRLGSGAAMGLDSHMAGVHKMVNAHCNQPWNERCATLKHD 401

[Close]

BLAST of Sed0004794 vs. ExPASy TrEMBL
Match: A0A6J1HB25 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111461183 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.0e-33
Identity = 87/170 (51.18%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 1   MYKYSLLYPKFKRKDRS-GLYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFEQ-- 60
           MYK SLL+P   R D S  L  +    Q I P T+L EAGI  KRS+T SLT V F+   
Sbjct: 228 MYKESLLHPPIDRTDWSVELGHSDPECQVIPPATKLREAGIKFKRSKTGSLTDVFFDAKG 287

Query: 61  GELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENI 120
           G L L  L+VD++TE  L NVMAFE LH +AG +VTSF+ILM+NLI+  RDVA+L  E +
Sbjct: 288 GVLWLPRLMVDDNTESTLLNVMAFEKLHMKAGRKVTSFVILMSNLIDDERDVAVLAGEQV 347

Query: 121 VLNSLGTDQDAADMFSRLGSGVVLGLDIQMVQMYGMIDEHCNRSWNKWCA 168
           + N++G D++AA +F+RLGSG  +GLD  M  ++  ++EHCN+ WN+ CA
Sbjct: 348 LANAVGNDKEAAGLFNRLGSGAAMGLDTHMAWVHKKVNEHCNQPWNERCA 397

[Close]

BLAST of Sed0004794 vs. ExPASy TrEMBL
Match: A0A6J1D5C0 (UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111017450 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.8e-30
Identity = 90/194 (46.39%), Postives = 121/194 (62.37%), Query Frame = 0


Query: 1   MYKYSLLYPKF----KRKDRS---GLYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHV 60
           MY  +LL PK     ++K RS      L+ +I Q I P TRLHEAGI  +RS++ S+T V
Sbjct: 223 MYMDTLLLPKVVSQGRQKGRSKEAAKELDSEI-QIIWPATRLHEAGIRFRRSQSKSITDV 282

Query: 61  SFEQ--GELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVAL 120
            F++  G L L  ++VD+DTE    NVMAFE LH EAG++VT FI+LMNNLI+  +DVAL
Sbjct: 283 WFDEKRGVLKLPKMVVDDDTESTFLNVMAFEKLHKEAGSKVTCFILLMNNLIDVDQDVAL 342

Query: 121 LDYENIVLNSLGTDQDAADMFSRLGSGVVLGL--DIQMVQMYGMIDEHCNRSWNKWCARQ 180
           L    I+LN+LG DQDAA++F RL  G  L L  D  +  +  M+ EHC +  +KWCA  
Sbjct: 343 LASNKIILNALGNDQDAAELFGRLAQGAALDLKSDSHITHVQEMVIEHCKKRRHKWCASL 402

Query: 181 MSDGSVYTCAVCSL 184
             +   +  A+ SL
Sbjct: 403 KHNYFQHPWAIVSL 415

[Close]

BLAST of Sed0004794 vs. ExPASy TrEMBL
Match: A0A0A0K9F5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G089270 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 0


Query: 1   MYKYSLLYP------------KFKRKDRSGLYLNRKISQKIRPVTRLHEAGILLKRSETD 60
           MY+ SLLYP            K  + D+ GL       Q I   T L EAGI  ++SE  
Sbjct: 196 MYRASLLYPSTLSYPNMDEIKKNNKDDKFGLK-----CQLIPQATLLREAGIRFRKSENK 255

Query: 61  SLTHVSFEQGELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRD 120
           SL +VSFE+G LTL SLIVD++T+  L NVMAFE LH + G++VTSF++LMNNLI+  +D
Sbjct: 256 SLENVSFEKGVLTLPSLIVDDNTKTNLLNVMAFEKLH-DVGSQVTSFVVLMNNLIDIDKD 315

Query: 121 VALLDYENIVLNSLGTDQDAADMFSRLGSGVVLGL-DIQMVQMYGMIDEHCNRSWNKWCA 168
           V LL  +NI+ N+LG +++AA++FS LG GV L L    + +++ +++ HC+ SWN+W A
Sbjct: 316 VELLSNDNIIANALGNNEEAANLFSVLGKGVSLDLGSNNLTEVHQLVNIHCDDSWNRWWA 369

[Close]

BLAST of Sed0004794 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-23
Identity = 56/153 (36.60%), Postives = 92/153 (60.13%), Query Frame = 0


Query: 12  KRKDRSGLYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFEQGELTLRSLIVDNDT 71
           KR  R+   ++++  Q +  VT L EAG+  ++ +TD    + F+ G L +  L++ + T
Sbjct: 341 KRLTRNTRVVDKRQQQLVHCVTELREAGVKFRKRKTDRFWDIEFKNGYLEIPKLLIHDGT 400

Query: 72  EFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENIVLNSLGTDQDAADM 131
           +   SN++AFE  H E+ N +TS+II M+NLIN S DV+ L Y  I+ + LG+D + AD+
Sbjct: 401 KSLFSNLIAFEQCHIESSNHITSYIIFMDNLINSSEDVSYLHYCGIIEHWLGSDSEVADL 460

Query: 132 FSRLGSGVVLG-LDIQMVQMYGMIDEHCNRSWN 164
           F+RL   VV    D  + ++ G ++ + NR WN
Sbjct: 461 FNRLCQEVVFDPKDSHLSRLSGDVNRYYNRKWN 493

[Close]

BLAST of Sed0004794 vs. TAIR 10
Match: AT3G50140.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 101.7 bits (252), Expect = 6.7e-22
Identity = 57/172 (33.14%), Postives = 97/172 (56.40%), Query Frame = 0


Query: 1   MYKYSLLYPKFK--------RKDRSGLYLNRKISQKIRPVTRLHEAGILLKRSETDSLTH 60
           +++ SLL P  K        R  R  L  +++  Q +  VT L EAGI  KR ++D    
Sbjct: 322 VFRRSLLQPSLKPDPRLSRSRWSRKPLVADKRQQQLLHCVTELREAGIKFKRRKSDRFWD 381

Query: 61  VSFEQGELTLRSLIVDNDTEFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALL 120
           + F+ G L +  L++ + T+   SN++A+E  H ++ N++TS+II M+NLI+ + D+  L
Sbjct: 382 IQFKNGCLEIPKLLIHDGTKSLFSNLIAYEQCHIDSTNDITSYIIFMDNLIDSAEDIRYL 441

Query: 121 DYENIVLNSLGTDQDAADMFSRLGSGVVLGLD-IQMVQMYGMIDEHCNRSWN 164
            Y +I+ + LG D + AD+F+RL   V   L+   + ++   +D + NR WN
Sbjct: 442 HYYDIIEHWLGNDSEVADVFNRLCQEVAFDLENTYLSELSNKVDRYYNRKWN 493

[Close]

BLAST of Sed0004794 vs. TAIR 10
Match: AT3G50150.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-21
Identity = 53/141 (37.59%), Postives = 85/141 (60.28%), Query Frame = 0


Query: 24  KISQKIRPVTRLHEAGILLKRSETDSLTHVSFEQGELTLRSLIVDNDTEFKLSNVMAFET 83
           K  Q I  VT L  AG+   R ET  L  + F+ G L +  L++ + T+   SN++AFE 
Sbjct: 323 KQQQLIHCVTELRGAGVNFMRKETGQLWDIEFKNGYLKIPKLLIHDGTKSLFSNLIAFEQ 382

Query: 84  LHTEAGNEVTSFIILMNNLINGSRDVALLDYENIVLNSLGTDQDAADMFSRLGSGVVLG- 143
            HT++ N +TS+II M+NLIN S+DV+ L ++ I+ + LG+D + AD+F+RL   V+   
Sbjct: 383 CHTQSSNNITSYIIFMDNLINSSQDVSYLHHDGIIEHWLGSDSEVADLFNRLCKEVIFDP 442

Query: 144 LDIQMVQMYGMIDEHCNRSWN 164
            D  + Q+   ++ + +R WN
Sbjct: 443 KDGYLSQLSREVNRYYSRKWN 463

[Close]

BLAST of Sed0004794 vs. TAIR 10
Match: AT3G50120.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 96.3 bits (238), Expect = 2.8e-20
Identity = 54/157 (34.39%), Postives = 90/157 (57.32%), Query Frame = 0


Query: 12  KRKDRSGLYLNRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFEQGELTLRSLIVDNDT 71
           KR  R+    +++  Q I  VT L EAGI  +R +TD    + F+ G L +  L++ + T
Sbjct: 333 KRWSRNTRVADKRRQQLIHCVTELKEAGIKFRRRKTDRFWDMQFKNGYLEIPRLLIHDGT 392

Query: 72  EFKLSNVMAFETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENIVLNSLGTDQDAADM 131
           +    N++AFE  H ++ N++TS+II M+NLI+   DV+ L Y  I+ + LG+D + AD+
Sbjct: 393 KSLFLNLIAFEQCHIDSSNDITSYIIFMDNLIDSHEDVSYLHYCGIIEHWLGSDSEVADL 452

Query: 132 FSRLGSGVVLGL-DIQMVQMYGMIDEHCNRSWNKWCA 168
           F+RL   VV    D  + ++   ++ + +  WN W A
Sbjct: 453 FNRLCQEVVFDTEDSYLSRLSIEVNRYYDHKWNAWRA 489

[Close]

BLAST of Sed0004794 vs. TAIR 10
Match: AT3G50130.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 94.7 bits (234), Expect = 8.2e-20
Identity = 51/143 (35.66%), Postives = 83/143 (58.04%), Query Frame = 0


Query: 22  NRKISQKIRPVTRLHEAGILLKRSETDSLTHVSFEQGELTLRSLIVDNDTEFKLSNVMAF 81
           +++  Q I  VT L EAGI  +  +TD    + F+ G L +  L++ + T+   SN++AF
Sbjct: 376 DKRQQQLIHCVTELREAGIKFRTRKTDRFWDIRFKNGYLEIPKLLIHDGTKSLFSNLIAF 435

Query: 82  ETLHTEAGNEVTSFIILMNNLINGSRDVALLDYENIVLNSLGTDQDAADMFSRLGSGVVL 141
           E  H ++ N++TS+II M+NLI+ S DV  L Y  I+ + LG D + AD+F+RL   V  
Sbjct: 436 EQCHIDSSNDITSYIIFMDNLIDSSEDVRYLHYCGIIEHWLGNDYEVADLFNRLCQEVAF 495

Query: 142 G-LDIQMVQMYGMIDEHCNRSWN 164
              +  + Q+   +D + +R WN
Sbjct: 496 DPQNSYLSQLSNKVDRNYSRKWN 518

The following BLAST results are available for this feature:

BLAST of Sed0004794 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004238.1	2.6e-36	52.00	UPF0481 protein At3g47200-like isoform X1 [Cucurbita maxima]	[more]
XP_023004239.1	2.6e-36	52.00	UPF0481 protein At3g47200-like isoform X2 [Cucurbita maxima]	[more]
XP_038875622.1	3.4e-36	48.70	UPF0481 protein At3g47200-like [Benincasa hispida]	[more]
XP_023513986.1	1.3e-35	52.00	UPF0481 protein At3g47200-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023513987.1	1.3e-35	52.00	UPF0481 protein At3g47200-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0004794 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD53	6.3e-09	25.76	UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1	[more]
P0C897	9.1e-08	30.43	Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 ...	[more]

BLAST of Sed0004794 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KYV8	1.3e-36	52.00	UPF0481 protein At3g47200-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1KVQ6	1.3e-36	52.00	UPF0481 protein At3g47200-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1HB25	1.0e-33	51.18	UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111461183 PE=...	[more]
A0A6J1D5C0	1.8e-30	46.39	UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111017450 PE...	[more]
A0A0A0K9F5	1.1e-29	46.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G089270 PE=4 SV=1	[more]

BLAST of Sed0004794 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50170.1	2.1e-23	36.60	Plant protein of unknown function (DUF247)	[more]
AT3G50140.1	6.7e-22	33.14	Plant protein of unknown function (DUF247)	[more]
AT3G50150.1	3.3e-21	37.59	Plant protein of unknown function (DUF247)	[more]
AT3G50120.1	2.8e-20	34.39	Plant protein of unknown function (DUF247)	[more]
AT3G50130.1	8.2e-20	35.66	Plant protein of unknown function (DUF247)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004158	Protein of unknown function DUF247, plant	PFAM	PF03140	DUF247	coord: 22..172 e-value: 1.0E-37 score: 130.4
IPR004158	Protein of unknown function DUF247, plant	PANTHER	PTHR31549	PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED	coord: 24..169
None	No IPR available	PANTHER	PTHR31549:SF65	OS08G0337800 PROTEIN	coord: 24..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004794.1	Sed0004794.1	mRNA