Sed0004781 (gene) Chayote v1

Overview


Name	Sed0004781
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG06: 42164431 .. 42167322 (+)
RNA-Seq Expression	Sed0004781
Synteny	Sed0004781

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCATGTAAGGGCAGAAGAAGTAAAATCGTTTCAATTGATCTTCAAGAATTGAATGAGAGCTTCTTGTTTACAAATTCCACAGCAATGGCTCTCAATCTCCATTGTTGCTGTTCATCGATTCGATTCCTTCCTCTCCATCCAAAAGTTTCGCCTCAAGTTCTTCGTTCCGATCGTCTGAATCGCACTTCGAAATCGAGTGCAAATTCGCCCAAATTCCATACAATTCGCAGCTCTGCGAATTCGAACGACCTTAGAACTTGCAGGAATTGCAAGGGTCAATTTCAATCCTCCCTTAATCACCCACGAGCTTGCCGATTTCACACTGCCCATTTTGGAGGTAACCTAAGTTGTTTGCATTTCTTCCAATTTCATCGCTGTTTGTACGATTTGAATGTGTTAAATGATTTAGTGGCTTCTCAGCTCTTGATTTGACCATGATTTGTAATCCCAAAATGATGTGCTGCTTTATGAAATCTGGAATTTGGGGTGTGTTTCGAGTCCCTGTTTATGTAAACAGCCGAGTCGGTTATAATAACCTTATATTATTATTGGTAGTTACCTAAATCTGCTTGCCACTTTATCTAAATTTACATGCTTATTTATCTAAACTTTACATATATAATTTTGGTTACAATAATCAGCCCCTCATAGACGGTCTATCATAACCTCTGCTATGATAAGCTGCCCCTCAAACACCATTTATAATAATCCACAACGTATCATAACCCACCATTTATCATAACCCTCCGTCTATCATGATCAAATCAGTGCCCCAAACACATTGGTTTATATCCTGATCTCATCAATTAGGTTTTGGTACTTACATACTTTAAATCCATTGTCTAAATTTCCAATAAGAGTTGTATGATTAAGATGTCATGAATTTGAATCCCCTAATTAAACAAAGGAATTCATGGTCATTAACTTACAAAATGTCCATTTTTGTCCCAGAAAAATAAAATGGTCCTTGTCATATAGTATTTTCTCCTAATACTTTATTTTAATCTATGTTTCTACATATGCACACATTGCAGTTCCAAGTTCCCGGGTCATAAAAAAAAACACGTGCACACATTACCACTTTAATATGCATACTTGAAGTTAATAACTAATATTTTAAAATCGAAATAAAAGTAAGGACTAATAGTTATTTTTTAGAAGTCCAAGGACTAAAATAAACATTTAGAAATTTAGAAATCATGAAAGAGTAGGGACCAAAATGATAACATTCATAGTTATTTTTATTTCATTTTACTTCATAGGAATTTGTGTTTCTGTTTGTACAATTTGAACGTGTCCAAATCTTTGGTTCCTGCTCAGCTCTTGATTTATCCATGATTTGTAAACCTTGTTTAGTTAGTTGTAATTAAGGCAATGCTTGATGGACACTGGAAATTGAAGGTTTATGTTCTCTTCTCATCAATTTCTTTTTGGCTATTACTTCTTGTTCAATTTACTTCAAATACTAGTAGATATCTGCTCATGCTGTAAACAAAGTATAATTGTGTTGTGTTAGATCTCTGTACATTATGTACAGAAAAACTAATTATCCAGAGAAATATCTTTTGTTGCAAAGTTGGAAATATTGAAAGTTTAAGAACTAAAATGGAATACGTTAAAATTCAATGATACTATACCTTTTTTTTTTTTTGCTTGTACTCTGCCTAGAATGACCTTTTTCCTTTTCGTTGAGTTTCTTTAAACAATAGCCTCGAGCACTTATCTTAAAATCTTTGACATTTGATTATCAACCATGGTTACCAGTTAACTAAAAAAGCAGAAGAATGGTGTCAATGACTTCATAAGATTAAAATCTATCCTTTGTTGCTTGTCTACACACCTGCAAGTTGAAATGTTTAGAACAAACATTATGTGTAACAAAATCCTTGCTGATTGATTACGATCAGAAGAGGTGGAGGTTCGGGGTAGACCGTGAAAACTCGAAAATGTTTTGTTTCTCTTTAACACTCGACTAGTTTTTCGGTTATTTTGAAATTTAGAAATGGACTGCTACTCAGTTTAGTACTTCAAATCATTCTTGGCTTTTTCTGAAGGTCCAAATTTCAACTTCTCGAGTCAATAGTTTGCTGGTCAAGAGTGTAATTCATTCCCGTTTACTTTCTCTTTTACAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACACAGGAGGAACAATGAACACTCCAGATGCAGGCAAAGTATTTCAATATTGGCATTGTTGTGGGTCCGAGGATCCTTTCGATCCAGGATGTACTGCTGCTCCACACTCGTCCTACGATGATGTTTAATACCGCAAATTTACAACCTTTCTTCAAGGTCCCATCTTTCATGCAAGACTCTTGTACATTTTCTTTCTTACTGAAATCATGTGCCCAAGTGCACATGTTCATATCCTATCTGAATTGGTTATCTACTGCCATTTTCGTGGCATGCATGTGTATGATGTATTTCATTGTTAGTTAGGGGCTGTTTGTTTGACATATTTAGGTAATTTTTCAGTTAAGGAGTTATATTGAGTAGTTAAAAATTGAGAGTTGTGTCAAAAACTCGTTTGGATGTAGTTTTTTTGTAGAAGAGTTAAGAGTCAAAATCTTGTTTGGATGTAGATTTAAAAATGAGTAGTTATTTTTAGTAGTTAAAAAAAATGATTAAAAGTGAATGGTTAAAAATGAGTTATTTTGATTGATTTGAAAACAATGATTAAAAATAAGTAGTTAGAAATGATTGAGTACTATAAATGAATGATTAAAATTGAATGGTTAGAAATGAGAGTTAATTTTAAAAGTAAAAATGATGAGAAGTTAATAAAAACTCGTTCGGATGTAAGTTTTCGACGAGGAGTTAATAAAAACTAAAAATAATTCCTACCTAAATATGTCAAATAAAC

mRNA sequence

TTTTCATGTAAGGGCAGAAGAAGTAAAATCGTTTCAATTGATCTTCAAGAATTGAATGAGAGCTTCTTGTTTACAAATTCCACAGCAATGGCTCTCAATCTCCATTGTTGCTGTTCATCGATTCGATTCCTTCCTCTCCATCCAAAAGTTTCGCCTCAAGTTCTTCGTTCCGATCGTCTGAATCGCACTTCGAAATCGAGTGCAAATTCGCCCAAATTCCATACAATTCGCAGCTCTGCGAATTCGAACGACCTTAGAACTTGCAGGAATTGCAAGGGTCAATTTCAATCCTCCCTTAATCACCCACGAGCTTGCCGATTTCACACTGCCCATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACACAGGAGGAACAATGAACACTCCAGATGCAGGCAAAGTATTTCAATATTGGCATTGTTGTGGGTCCGAGGATCCTTTCGATCCAGGATGTACTGCTGCTCCACACTCGTCCTACGATGATGTTTAATACCGCAAATTTACAACCTTTCTTCAAGGTCCCATCTTTCATGCAAGACTCTTGTACATTTTCTTTCTTACTGAAATCATGTGCCCAAGTGCACATGTTCATATCCTATCTGAATTGGTTATCTACTGCCATTTTCGTGGCATGCATGTGTATGATGTATTTCATTGTTAGTTAGGGGCTGTTTGTTTGACATATTTAGGTAATTTTTCAGTTAAGGAGTTATATTGAGTAGTTAAAAATTGAGAGTTGTGTCAAAAACTCGTTTGGATGTAGTTTTTTTGTAGAAGAGTTAAGAGTCAAAATCTTGTTTGGATGTAGATTTAAAAATGAGTAGTTATTTTTAGTAGTTAAAAAAAATGATTAAAAGTGAATGGTTAAAAATGAGTTATTTTGATTGATTTGAAAACAATGATTAAAAATAAGTAGTTAGAAATGATTGAGTACTATAAATGAATGATTAAAATTGAATGGTTAGAAATGAGAGTTAATTTTAAAAGTAAAAATGATGAGAAGTTAATAAAAACTCGTTCGGATGTAAGTTTTCGACGAGGAGTTAATAAAAACTAAAAATAATTCCTACCTAAATATGTCAAATAAAC

Coding sequence (CDS)

ATGGCTCTCAATCTCCATTGTTGCTGTTCATCGATTCGATTCCTTCCTCTCCATCCAAAAGTTTCGCCTCAAGTTCTTCGTTCCGATCGTCTGAATCGCACTTCGAAATCGAGTGCAAATTCGCCCAAATTCCATACAATTCGCAGCTCTGCGAATTCGAACGACCTTAGAACTTGCAGGAATTGCAAGGGTCAATTTCAATCCTCCCTTAATCACCCACGAGCTTGCCGATTTCACACTGCCCATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACACAGGAGGAACAATGAACACTCCAGATGCAGGCAAAGTATTTCAATATTGGCATTGTTGTGGGTCCGAGGATCCTTTCGATCCAGGATGTACTGCTGCTCCACACTCGTCCTACGATGATGTTTAA

Protein sequence

MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSNDLRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV

Homology

[Close]

BLAST of Sed0004781 vs. NCBI nr
Match: XP_022143294.1 (uncharacterized protein LOC111013199 [Momordica charantia])

HSP 1 Score: 245.4 bits (625), Expect = 2.9e-61
Identity = 117/138 (84.78%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LR 60
           MALNLHC CSS RFLPL PK   +VLRSDRLNR SK SA+S KFHTIR+SANSN+   LR
Sbjct: 1   MALNLHCYCSSTRFLPLTPKAPSEVLRSDRLNRASKLSADSTKFHTIRNSANSNNQLTLR 60

Query: 61  TCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGS 120
           TCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTGGTM+TPD+GKVFQYWHCCGS
Sbjct: 61  TCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVFQYWHCCGS 120

Query: 121 EDPFDPGCTAAPHSSYDD 136
           EDPFDPGCTAAPHSSYDD
Sbjct: 121 EDPFDPGCTAAPHSSYDD 138

[Close]

BLAST of Sed0004781 vs. NCBI nr
Match: XP_038879129.1 (uncharacterized protein LOC120071126 [Benincasa hispida] >XP_038879138.1 uncharacterized protein LOC120071126 [Benincasa hispida] >XP_038879146.1 uncharacterized protein LOC120071126 [Benincasa hispida] >XP_038879154.1 uncharacterized protein LOC120071126 [Benincasa hispida])

HSP 1 Score: 235.0 bits (598), Expect = 3.9e-58
Identity = 114/138 (82.61%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LR 60
           MALNLHC  SS RFL LHPK+  QV+RSDRLNRTSK S+NSPKF  IRSSA+SN+   LR
Sbjct: 1   MALNLHCYHSSARFLSLHPKL--QVIRSDRLNRTSKLSSNSPKFLRIRSSADSNNQLTLR 60

Query: 61  TCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGS 120
           TCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVH+GGTM+TPD+GKVFQYWHCCGS
Sbjct: 61  TCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGS 120

Query: 121 EDPFDPGCTAAPHSSYDD 136
           EDPFDPGCTA+PHSSYDD
Sbjct: 121 EDPFDPGCTASPHSSYDD 136

[Close]

BLAST of Sed0004781 vs. NCBI nr
Match: XP_023522633.1 (uncharacterized protein LOC111786627 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.3 bits (586), Expect = 9.7e-57
Identity = 111/139 (79.86%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 1   MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LR 60
           MALNLHCCC S RF+  H +V  +  RS  LNRTSK SANSPK +TIRSSANS++   LR
Sbjct: 1   MALNLHCCCLSARFISFHSEV--RDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLR 60

Query: 61  TCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGS 120
           TCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTGGTM+TPD+GKV QYWHCCGS
Sbjct: 61  TCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGS 120

Query: 121 EDPFDPGCTAAPHSSYDDV 137
           EDPFDPGCTAAPHSSYDDV
Sbjct: 121 EDPFDPGCTAAPHSSYDDV 137

[Close]

BLAST of Sed0004781 vs. NCBI nr
Match: KAG6606995.1 (hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.9 bits (585), Expect = 1.3e-56
Identity = 112/139 (80.58%), Postives = 118/139 (84.89%), Query Frame = 0


Query: 1   MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LR 60
           MALNLHCCC S RF+ +H +V  +  RS  LNRTSK SANS KF  IRSSANSND   LR
Sbjct: 1   MALNLHCCCLSARFISIHSEV--RDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLR 60

Query: 61  TCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGS 120
           TCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTGGTM+TPD+GKV QYWHCCGS
Sbjct: 61  TCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGS 120

Query: 121 EDPFDPGCTAAPHSSYDDV 137
           EDPFDPGCTAAPHSSYDDV
Sbjct: 121 EDPFDPGCTAAPHSSYDDV 137

[Close]

BLAST of Sed0004781 vs. NCBI nr
Match: XP_022948602.1 (uncharacterized protein LOC111452227 [Cucurbita moschata])

HSP 1 Score: 229.2 bits (583), Expect = 2.2e-56
Identity = 112/139 (80.58%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 1   MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LR 60
           MALNLHCCC S RF+  H +V  +  RS  LNRTSK SANS KF  IRSSANSND   LR
Sbjct: 1   MALNLHCCCLSARFISFHSEV--RDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLR 60

Query: 61  TCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGS 120
           TCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTGGTM+TPD+GKV QYWHCCGS
Sbjct: 61  TCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGS 120

Query: 121 EDPFDPGCTAAPHSSYDDV 137
           EDPFDPGCTAAPHSSYDDV
Sbjct: 121 EDPFDPGCTAAPHSSYDDV 137

[Close]

BLAST of Sed0004781 vs. ExPASy TrEMBL
Match: A0A6J1CNX1 (uncharacterized protein LOC111013199 OS=Momordica charantia OX=3673 GN=LOC111013199 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.4e-61
Identity = 117/138 (84.78%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LR 60
           MALNLHC CSS RFLPL PK   +VLRSDRLNR SK SA+S KFHTIR+SANSN+   LR
Sbjct: 1   MALNLHCYCSSTRFLPLTPKAPSEVLRSDRLNRASKLSADSTKFHTIRNSANSNNQLTLR 60

Query: 61  TCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGS 120
           TCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTGGTM+TPD+GKVFQYWHCCGS
Sbjct: 61  TCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVFQYWHCCGS 120

Query: 121 EDPFDPGCTAAPHSSYDD 136
           EDPFDPGCTAAPHSSYDD
Sbjct: 121 EDPFDPGCTAAPHSSYDD 138

[Close]

BLAST of Sed0004781 vs. ExPASy TrEMBL
Match: A0A6J1G9P5 (uncharacterized protein LOC111452227 OS=Cucurbita moschata OX=3662 GN=LOC111452227 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.0e-56
Identity = 112/139 (80.58%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 1   MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LR 60
           MALNLHCCC S RF+  H +V  +  RS  LNRTSK SANS KF  IRSSANSND   LR
Sbjct: 1   MALNLHCCCLSARFISFHSEV--RDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLR 60

Query: 61  TCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGS 120
           TCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTGGTM+TPD+GKV QYWHCCGS
Sbjct: 61  TCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGS 120

Query: 121 EDPFDPGCTAAPHSSYDDV 137
           EDPFDPGCTAAPHSSYDDV
Sbjct: 121 EDPFDPGCTAAPHSSYDDV 137

[Close]

BLAST of Sed0004781 vs. ExPASy TrEMBL
Match: A0A6J1K626 (uncharacterized protein LOC111492645 OS=Cucurbita maxima OX=3661 GN=LOC111492645 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.3e-56
Identity = 110/139 (79.14%), Postives = 118/139 (84.89%), Query Frame = 0


Query: 1   MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LR 60
           MALNLHCCC S RF+  H +V  +  RS  LNRTSK SANSPK + IRSSANS++   LR
Sbjct: 12  MALNLHCCCLSARFISFHSEV--RDFRSGCLNRTSKLSANSPKIYRIRSSANSSNQLTLR 71

Query: 61  TCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGS 120
           TCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTGGTM+TPD+GKV QYWHCCGS
Sbjct: 72  TCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGS 131

Query: 121 EDPFDPGCTAAPHSSYDDV 137
           EDPFDPGCTAAPHSSYDDV
Sbjct: 132 EDPFDPGCTAAPHSSYDDV 148

[Close]

BLAST of Sed0004781 vs. ExPASy TrEMBL
Match: A0A0A0L8V5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185090 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.3e-54
Identity = 108/138 (78.26%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 1   MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LR 60
           MA NLHC  SS  F+ LH K    VLRSD LNRTSK S+NSPK  TIR SANSN+   LR
Sbjct: 1   MAPNLHCYHSSAPFISLHSKF--LVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLR 60

Query: 61  TCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGS 120
           TCRNCK QF  SLNHPRACRFHT+HFGGETKRKFESVH+GGTM+TPD+GKVFQYWHCCGS
Sbjct: 61  TCRNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGS 120

Query: 121 EDPFDPGCTAAPHSSYDD 136
           EDPFDPGCTA+PHSSYDD
Sbjct: 121 EDPFDPGCTASPHSSYDD 136

[Close]

BLAST of Sed0004781 vs. ExPASy TrEMBL
Match: A0A1S3C5F2 (uncharacterized protein LOC103496857 OS=Cucumis melo OX=3656 GN=LOC103496857 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.2e-49
Identity = 103/138 (74.64%), Postives = 110/138 (79.71%), Query Frame = 0


Query: 1   MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LR 60
           MA NLHC  SS  F+ LH    P VLRS     TSK  +NS KF +IR SANSN+   LR
Sbjct: 1   MAPNLHCYHSSPPFISLHS--YPLVLRSHAPYPTSKHCSNSLKFLSIRCSANSNNQLTLR 60

Query: 61  TCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGS 120
           TCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVH GGTM+TPD+GKVFQYWHCCGS
Sbjct: 61  TCRNCKSQFDPSLNHPRACRFHTAHFGGETKRKFESVHLGGTMDTPDSGKVFQYWHCCGS 120

Query: 121 EDPFDPGCTAAPHSSYDD 136
           EDPFDPGCTA+PHSSYDD
Sbjct: 121 EDPFDPGCTASPHSSYDD 136

[Close]

BLAST of Sed0004781 vs. TAIR 10
Match: AT5G38060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 155.2 bits (391), Expect = 3.7e-38
Identity = 73/114 (64.04%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 25  VLRSDRLNRTSKSSANSPKFH---TIRSSANSNDLRTCRNCKGQFQSSLNHPRACRFHTA 84
           ++ S  L        NS +F    T  SS     LRTC+NCK QF   LN+PRACRFHTA
Sbjct: 21  LIHSHSLKTLKTPKLNSRQFFSQCTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRFHTA 80

Query: 85  HFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD 136
           HFGGETKRKFESV+TGGTM+TP++GKV QYWHCCGSEDPFD GCTA+PH++YDD
Sbjct: 81  HFGGETKRKFESVYTGGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 134

[Close]

BLAST of Sed0004781 vs. TAIR 10
Match: AT5G38060.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 7.0e-29
Identity = 62/114 (54.39%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 25  VLRSDRLNRTSKSSANSPKFH---TIRSSANSNDLRTCRNCKGQFQSSLNHPRACRFHTA 84
           ++ S  L        NS +F    T  SS     LRTC+NCK QF   LN+PRACRFHTA
Sbjct: 21  LIHSHSLKTLKTPKLNSRQFFSQCTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRFHTA 80

Query: 85  HFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD 136
           HFG            GGTM+TP++GKV QYWHCCGSEDPFD GCTA+PH++YDD
Sbjct: 81  HFG------------GGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 122

[Close]

BLAST of Sed0004781 vs. TAIR 10
Match: AT1G65000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08
Identity = 28/83 (33.73%), Postives = 40/83 (48.19%), Query Frame = 0


Query: 57  RTCRNCKGQFQSSLNHPRACRFHTAHF----GGETKRKFESVHTGGTMNTPDAGKVFQYW 116
           + C+ CK  +    N   +CRFH + F      + KR +E       +   D     +++
Sbjct: 8   KLCQRCKQSYTDLSNETSSCRFHPSFFVCRRHDDQKRYYE-------LKPDDPPYAAKFY 67

Query: 117 HCCGSEDPFDPGCTAAPHSSYDD 136
            CCG+EDP  PGC   PH SYDD
Sbjct: 68  DCCGAEDPNAPGCVTNPHISYDD 83

The following BLAST results are available for this feature:

BLAST of Sed0004781 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143294.1	2.9e-61	84.78	uncharacterized protein LOC111013199 [Momordica charantia]	[more]
XP_038879129.1	3.9e-58	82.61	uncharacterized protein LOC120071126 [Benincasa hispida] >XP_038879138.1 unchara...	[more]
XP_023522633.1	9.7e-57	79.86	uncharacterized protein LOC111786627 [Cucurbita pepo subsp. pepo]	[more]
KAG6606995.1	1.3e-56	80.58	hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022948602.1	2.2e-56	80.58	uncharacterized protein LOC111452227 [Cucurbita moschata]	[more]

BLAST of Sed0004781 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0004781 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNX1	1.4e-61	84.78	uncharacterized protein LOC111013199 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1G9P5	1.0e-56	80.58	uncharacterized protein LOC111452227 OS=Cucurbita moschata OX=3662 GN=LOC1114522...	[more]
A0A6J1K626	2.3e-56	79.14	uncharacterized protein LOC111492645 OS=Cucurbita maxima OX=3661 GN=LOC111492645...	[more]
A0A0A0L8V5	8.3e-54	78.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185090 PE=4 SV=1	[more]
A0A1S3C5F2	6.2e-49	74.64	uncharacterized protein LOC103496857 OS=Cucumis melo OX=3656 GN=LOC103496857 PE=...	[more]

BLAST of Sed0004781 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38060.1	3.7e-38	64.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G38060.2	7.0e-29	54.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G65000.1	2.3e-08	33.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35106:SF5	CARBOXYPEPTIDASE	coord: 14..135
None	No IPR available	PANTHER	PTHR35106	BNAA07G25190D PROTEIN	coord: 14..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004781.1	Sed0004781.1	mRNA