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Sed0004750 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCACTCAAAGCCATTAAAAGCCTTTTCTTCTTTTTTTTGTCTTTGAAAACTCTCTTAATTAACAATATCATGGCTGGCGTTTGGGTGTTCAAAAACGGCGTCGTTCGGCTGGTGGAGAACGGCGGAGCGGACACGGCGGAGGGAGGCGGCGGAGGGCGGCCGAGACTCCGCCGGAAAGTGTTGGTGTACAGCCCGACGGCGGAGGTGATGACGTCATACGCGGCGTTGGAACAGAAATTGATGACGTTGGGTTGGGAACGTTATTATAACGATCCGAATTTGTTGCAATTCCACAAGCGATCAACGGTTCATTTAATTTCTCTTCCTAAAGATTTTTCAAAATTTAAATCCATGCATATGTATGATATTGTCGTCAAAAATCGAAACCATTTCGAAGTTAAAGATATCTAATTAATTAATCCATGCATCTAATTCAAATAAATAAAATAAATGATTTTCTTGAGAAAAATTATTGTTTCGGGTAACGGTTGGATGCAGATTCAAAAGTATACGATGGTGCACGAGTTTGAAATAGAGTAAGTCACCGACTTTACAGATATGTTAATTGAGTTATGTTCATTTTGACGTTGGATGCAGATTTCAAATGATGTACATGAGATAGAATCGTCAGATGTCTTATTTTTGTCACTTATATTTTTTTTTTTTTTTTGAAGATGGGTTTGTGAGAATAAATATTAATGTAGCTTATTAGGTTTGGATTTAAGTTTGTGTTTTTTGATGTGTGGCTTTGATACGACGTGGAGTATCAGATATGGTTAGGTGTCGTTTCTTTTTCTTTTTTTTTAAGGTTTTGATTATGTGTATTGAAGTTGAATGAAGTGGATTTGCC ATTTCACTCAAAGCCATTAAAAGCCTTTTCTTCTTTTTTTTGTCTTTGAAAACTCTCTTAATTAACAATATCATGGCTGGCGTTTGGGTGTTCAAAAACGGCGTCGTTCGGCTGGTGGAGAACGGCGGAGCGGACACGGCGGAGGGAGGCGGCGGAGGGCGGCCGAGACTCCGCCGGAAAGTGTTGGTGTACAGCCCGACGGCGGAGGTGATGACGTCATACGCGGCGTTGGAACAGAAATTGATGACGTTGGGTTGGGAACGTTATTATAACGATCCGAATTTGTTGCAATTCCACAAGCGATCAACGGTTCATTTAATTTCTCTTCCTAAAGATTTTTCAAAATTTAAATCCATGCATATGTATGATATTGTCGTCAAAAATCGAAACCATTTCGAAGTTAAAGATATCTAATTAATTAATCCATGCATCTAATTCAAATAAATAAAATAAATGATTTTCTTGAGAAAAATTATTGTTTCGGGTAACGGTTGGATGCAGATTCAAAAGTATACGATGGTGCACGAGTTTGAAATAGAGTAAGTCACCGACTTTACAGATATGTTAATTGAGTTATGTTCATTTTGACGTTGGATGCAGATTTCAAATGATGTACATGAGATAGAATCGTCAGATGTCTTATTTTTGTCACTTATATTTTTTTTTTTTTTTTGAAGATGGGTTTGTGAGAATAAATATTAATGTAGCTTATTAGGTTTGGATTTAAGTTTGTGTTTTTTGATGTGTGGCTTTGATACGACGTGGAGTATCAGATATGGTTAGGTGTCGTTTCTTTTTCTTTTTTTTTAAGGTTTTGATTATGTGTATTGAAGTTGAATGAAGTGGATTTGCC ATGGCTGGCGTTTGGGTGTTCAAAAACGGCGTCGTTCGGCTGGTGGAGAACGGCGGAGCGGACACGGCGGAGGGAGGCGGCGGAGGGCGGCCGAGACTCCGCCGGAAAGTGTTGGTGTACAGCCCGACGGCGGAGGTGATGACGTCATACGCGGCGTTGGAACAGAAATTGATGACGTTGGGTTGGGAACGTTATTATAACGATCCGAATTTGTTGCAATTCCACAAGCGATCAACGGTTCATTTAATTTCTCTTCCTAAAGATTTTTCAAAATTTAAATCCATGCATATGTATGATATTGTCGTCAAAAATCGAAACCATTTCGAAGTTAAAGATATCTAA MAGVWVFKNGVVRLVENGGADTAEGGGGGRPRLRRKVLVYSPTAEVMTSYAALEQKLMTLGWERYYNDPNLLQFHKRSTVHLISLPKDFSKFKSMHMYDIVVKNRNHFEVKDI Homology
BLAST of Sed0004750 vs. NCBI nr
Match: XP_022959407.1 (flowering-promoting factor 1-like protein 3 [Cucurbita moschata] >KAG6575061.1 Flowering-promoting factor 1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46 Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0004750 vs. NCBI nr
Match: XP_023006452.1 (flowering-promoting factor 1-like protein 3 [Cucurbita maxima] >XP_023549095.1 flowering-promoting factor 1-like protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 195.3 bits (495), Expect = 2.9e-46 Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0004750 vs. NCBI nr
Match: KAG7013634.1 (Flowering-promoting factor 1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194.9 bits (494), Expect = 3.8e-46 Identity = 95/112 (84.82%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0004750 vs. NCBI nr
Match: XP_038875612.1 (flowering-promoting factor 1-like protein 1 [Benincasa hispida]) HSP 1 Score: 191.4 bits (485), Expect = 4.2e-45 Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of Sed0004750 vs. NCBI nr
Match: XP_004143087.1 (flowering-promoting factor 1-like protein 1 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 9.3e-45 Identity = 93/112 (83.04%), Postives = 102/112 (91.07%), Query Frame = 0
BLAST of Sed0004750 vs. ExPASy Swiss-Prot
Match: Q0E1D7 (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 6.2e-36 Identity = 76/116 (65.52%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of Sed0004750 vs. ExPASy Swiss-Prot
Match: Q8LR63 (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0933500 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.7e-33 Identity = 75/127 (59.06%), Postives = 91/127 (71.65%), Query Frame = 0
BLAST of Sed0004750 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.1e-32 Identity = 70/112 (62.50%), Postives = 83/112 (74.11%), Query Frame = 0
BLAST of Sed0004750 vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.1e-32 Identity = 71/114 (62.28%), Postives = 87/114 (76.32%), Query Frame = 0
BLAST of Sed0004750 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 3.2e-32 Identity = 71/117 (60.68%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of Sed0004750 vs. ExPASy TrEMBL
Match: A0A6J1H4F8 (flowering-promoting factor 1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111460392 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.3e-47 Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0004750 vs. ExPASy TrEMBL
Match: A0A6J1KVW8 (flowering-promoting factor 1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111499175 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.4e-46 Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0004750 vs. ExPASy TrEMBL
Match: A0A0A0KCC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G194670 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.5e-45 Identity = 93/112 (83.04%), Postives = 102/112 (91.07%), Query Frame = 0
BLAST of Sed0004750 vs. ExPASy TrEMBL
Match: A0A6J1ER18 (flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111436916 PE=3 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.7e-44 Identity = 92/112 (82.14%), Postives = 100/112 (89.29%), Query Frame = 0
BLAST of Sed0004750 vs. ExPASy TrEMBL
Match: A0A1S3C8H5 (flowering-promoting factor 1-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103497861 PE=3 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.7e-44 Identity = 91/112 (81.25%), Postives = 102/112 (91.07%), Query Frame = 0
BLAST of Sed0004750 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 ) HSP 1 Score: 139.0 bits (349), Expect = 2.3e-33 Identity = 71/117 (60.68%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of Sed0004750 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 ) HSP 1 Score: 136.7 bits (343), Expect = 1.1e-32 Identity = 70/124 (56.45%), Postives = 94/124 (75.81%), Query Frame = 0
BLAST of Sed0004750 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 134.4 bits (337), Expect = 5.6e-32 Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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