Sed0004744 (gene) Chayote v1

Overview


Name	Sed0004744
Type	gene
Organism	Sechium edule (Chayote v1)
Description	E3 ubiquitin-protein ligase
Location	LG07: 42582017 .. 42585162 (-)
RNA-Seq Expression	Sed0004744
Synteny	Sed0004744

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAGAATTGGTTTTGTTTTGTTGGGGTTTTTGCGAGTTTTGGATTAGGTTTCCACGTCGCCGTTTGAAATGGGGTGCGGCCCACTCTGAGCTACCCCTCTCTTCAACAATGGTGTGTGGCCAACCGCCATTCCCTCTTTGCTTTTAAATATCTGTCTCTGAAGGCCCCCTTTCAATCTTGCTTGTTGGATTTGGTGGCCAACCATTCATTCTTCGCCAAAAGGTTGATTATATCTTCTTCTTTATTTTGGGATTTTGTTTTGGGTTTGAAGTTAGCCCAACGATTTTGCAGTATTTCTCAACTGTTTGATTGCTGATTTCACTTGTAATCGAAGTTAGGATTATCTTCTCTTATTGGGGTTTCCTGTTTTTTGCATTTTTGTTCATTTTTCTGGTGACCCAACTTCACCTTCCTGTTTTCTTCCTCTTTTTGCTTCTATATACACTCCACTATCGGTTCTTTGTTTGTTTTGAGATACCCTTTTGAAGCTTCTCTCTGAATTGGCAGTTTTGGGCCTGCACGATAGGTGTTTGATGTTTTGTCTCACTGAATACCTTGTAGTTGGGACATGGGAATTTCATGAATTTCAGTTTGTTTGCTTTTGTCTTCAAGTGGGTTCTGTTTCTTCTTTAATCATTACCAGCAAAACTTGTGTGATTTTGGTTGTCTTTGTGTTTGGACTGGCCATTCCTTTCATGAGAACTACCCCTTGTTCTGTTCTTTGCTCATATTTCCAATTCTTGTTCATGTCCGTGTAGTTTGTTGTCTTGTTCTTGATAAGGAGCTCAGAACAAGTTCGTTTTGTAATGATTCATTCTGGTTTCTTCCTTGTGGGTCCTTCATTTAGTCCTGATGCTACTACGCCTTTCATATTAACTCCGCTGTCTAGAGAAGATGGCGCTTCAGCGGACGATATCCGGAATGATTCGTCGGGTTCCCTTCCTCCTTCTTTTTGGGTTAGAATGGCGATGAGAGTCTCTAGAGCCAGATGGTTCATTTTCTTGAGAAGAGTTTTTCACTACCAGAATGGATCGAGATCTGATCTTGGGATGAATCCTTTCAATTCGGGTTCGTGGATGGTGATGGAACTTGTAGCTTTGTTGTTTCAGTTAATCATCTCAGTTTTTACTCTTGCTATCTCACAGACTGAGAGGCCAATTTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGTTTTCTTTGCTTATTGCTTCTTTACTGCCGCCATCGGTTTCATCATCAAATTCTGGAAGATGGTAATAGTCTTTCGGACATCGAACAGCAGAGGAACGATGGATCAATGAGGTAATCTTCAACATGCTAGTTTCTTCTTAATTGATTTTGATTTTGAATCGTAATCATGAAATATGACTTTTTAACTATGTCCTTTGAGAAGCCAGTGAGGAGGTATTGAATTTAGAATTGACAAAGAAGCTTAGGGTCAGTTGTGTTGCTAATGTTCCTTTCTGGAACGTTCAGGTTAATGAGTTTTTACGTAGCTCAAATAAGGAGCTTGTAAATAATAGCGGTAATTAGAAATTATGAGTTCAATCCATGATAGAAAGTTACCTACATAGGAATTAATTTTTTACAAATTATCTTGACAACCAAATGTACTAGAGTCAAGCGGTTGTCACGTGAGAATAGTCGAGGTTTGCATAATCTGTTATTCACAGTCGCATGTAGACAAAAAAGTCTTAAAAATATCCTAGAGACTGAGTTGAAGAACGAAAGGCTTTCTGACCCACAGGAACAAAATTTCTTTTATTGTTTAACTGAAAATAAATCTGTCAACTGAAAGTAAAACCCAATTATTTTGGGTTTCTTTGACTCGAATATTCAAATAGTCTGCATATGCAAGACTTTTAATCTGACTACTTTTATTCAACATATTTTTCAGGTACTCACATTTGATAAACAGATGTCGAACGTCTCTCGATCTTTTCTTTGCAATATGGTTTGTAATGGGCAATCTTTGGGTCTTCGATTCTCGATTTGCCTCGTTCCAAAGTGCTCCAAAACTTCATCTACTATGCAGCTTCCTGCTAGTTTTGAATGCCATTTGGTACTCTTTTCCATTCATTCTGTTTCTGCTGCTTTGTTGCTGTGTGCCATTGGTTAGTAGCCTTATAGGATATAACATTAACATGGGATCAACTGAAAGAGGAGCGTCGGATGATCAAATTTCTCAACTTCCTTGCTGGAAATACAAAGCCGTCGACGTCAACATCAATCTCGAAATTCAACCTGATAATAGCAATACAGGACGACTTCCAAAAGAGGATCCAGTAAGTAATATTTTCTCTTCCTGGTTTAGTAGAAACTAAAGAAGGAAACTCGAAAGTTCCCAAGGGGTAGCACAGTGGTTGAAGATTTGGGCTTTGAAGGTATACTCCTCTCAAGGTTCCAGGTTCGAGACTCACTTGTGGCATTACTCTTTTGATATCTCCAGGTGTCTGGCCTAGGGACGGGCATGGTTACCCTTGTTTCAAAAAAAAAAAAACTTGAGCTTTGAAGATGTGCTCCCCTCAAGGGTTCCAGGTTCGAGATTCACCTGTGACATCAATTTATAGACACCTCTCGTAACTCTATTCCTTCGAGAATCGAGATCTCATGGTACCTGGCCTAGGGATGGGCATGGTTACCTTGGGTATAGTGAAGCAAAGCTCTGCTTTCCTGATTTCAAAAAAAAAGAAGGAAACTCGAAAAGAACCATTTCTTATATGAGCGATCAGGAATCAAATTACATTCGTTTGTTATTGATTTTTCAGGAATGTTGTATCTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAATTACCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAATGGCTTGCTATTTCATCTTCATGCCCTCTTTGTAAGCAACAACTTCAAAGATAGGTAACCAAGAAAGCAGCAGTTCAAGTGTGCTGCATTGGATTTTTTTTTTTTTTTTTTGGTAGGGAAATTTTCTCATTTTCACTGCTTAGTGATTTAGCTATTTAGATTAGAGTTTCACATGGCTGGTTGCTTGAGTGAGTTCTTGTGCTCATCAGTTACCTAAATATACTGAATGTTACATATAGCAGGAAATTGATGCCTTATTTGTAGATATTGTGAG

mRNA sequence

GCAAGAATTGGTTTTGTTTTGTTGGGGTTTTTGCGAGTTTTGGATTAGGTTTCCACGTCGCCGTTTGAAATGGGGTGCGGCCCACTCTGAGCTACCCCTCTCTTCAACAATGGTGTGTGGCCAACCGCCATTCCCTCTTTGCTTTTAAATATCTGTCTCTGAAGGCCCCCTTTCAATCTTGCTTGTTGGATTTGGTGGCCAACCATTCATTCTTCGCCAAAAGGTTGATTATATCTTCTTCTTTATTTTGGGATTTTGTTTTGGGTTTGAAGTTAGCCCAACGATTTTGCAGTATTTCTCAACTGTTTGATTGCTGATTTCACTTGTAATCGAAGTTAGGATTATCTTCTCTTATTGGGGTTTCCTGTTTTTTGCATTTTTGTTCATTTTTCTGGTGACCCAACTTCACCTTCCTGTTTTCTTCCTCTTTTTGCTTCTATATACACTCCACTATCGGTTCTTTGTTTGTTTTGAGATACCCTTTTGAAGCTTCTCTCTGAATTGGCAGTTTTGGGCCTGCACGATAGGTGTTTGATGTTTTGTCTCACTGAATACCTTGTAGTTGGGACATGGGAATTTCATGAATTTCAGTTTGTTTGCTTTTGTCTTCAAGTGGGTTCTGTTTCTTCTTTAATCATTACCAGCAAAACTTGTGTGATTTTGGTTGTCTTTGTGTTTGGACTGGCCATTCCTTTCATGAGAACTACCCCTTGTTCTGTTCTTTGCTCATATTTCCAATTCTTGTTCATGTCCGTGTAGTTTGTTGTCTTGTTCTTGATAAGGAGCTCAGAACAAGTTCGTTTTGTAATGATTCATTCTGGTTTCTTCCTTGTGGGTCCTTCATTTAGTCCTGATGCTACTACGCCTTTCATATTAACTCCGCTGTCTAGAGAAGATGGCGCTTCAGCGGACGATATCCGGAATGATTCGTCGGGTTCCCTTCCTCCTTCTTTTTGGGTTAGAATGGCGATGAGAGTCTCTAGAGCCAGATGGTTCATTTTCTTGAGAAGAGTTTTTCACTACCAGAATGGATCGAGATCTGATCTTGGGATGAATCCTTTCAATTCGGGTTCGTGGATGGTGATGGAACTTGTAGCTTTGTTGTTTCAGTTAATCATCTCAGTTTTTACTCTTGCTATCTCACAGACTGAGAGGCCAATTTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGTTTTCTTTGCTTATTGCTTCTTTACTGCCGCCATCGGTTTCATCATCAAATTCTGGAAGATGGTAATAGTCTTTCGGACATCGAACAGCAGAGGAACGATGGATCAATGAGGTACTCACATTTGATAAACAGATGTCGAACGTCTCTCGATCTTTTCTTTGCAATATGGTTTGTAATGGGCAATCTTTGGGTCTTCGATTCTCGATTTGCCTCGTTCCAAAGTGCTCCAAAACTTCATCTACTATGCAGCTTCCTGCTAGTTTTGAATGCCATTTGGTACTCTTTTCCATTCATTCTGTTTCTGCTGCTTTGTTGCTGTGTGCCATTGGTTAGTAGCCTTATAGGATATAACATTAACATGGGATCAACTGAAAGAGGAGCGTCGGATGATCAAATTTCTCAACTTCCTTGCTGGAAATACAAAGCCGTCGACGTCAACATCAATCTCGAAATTCAACCTGATAATAGCAATACAGGACGACTTCCAAAAGAGGATCCAGAATGTTGTATCTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAATTACCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAATGGCTTGCTATTTCATCTTCATGCCCTCTTTGTAAGCAACAACTTCAAAGATAGGTAACCAAGAAAGCAGCAGTTCAAGTGTGCTGCATTGGATTTTTTTTTTTTTTTTTTGGTAGGGAAATTTTCTCATTTTCACTGCTTAGTGATTTAGCTATTTAGATTAGAGTTTCACATGGCTGGTTGCTTGAGTGAGTTCTTGTGCTCATCAGTTACCTAAATATACTGAATGTTACATATAGCAGGAAATTGATGCCTTATTTGTAGATATTGTGAG

Coding sequence (CDS)

ATGATTCATTCTGGTTTCTTCCTTGTGGGTCCTTCATTTAGTCCTGATGCTACTACGCCTTTCATATTAACTCCGCTGTCTAGAGAAGATGGCGCTTCAGCGGACGATATCCGGAATGATTCGTCGGGTTCCCTTCCTCCTTCTTTTTGGGTTAGAATGGCGATGAGAGTCTCTAGAGCCAGATGGTTCATTTTCTTGAGAAGAGTTTTTCACTACCAGAATGGATCGAGATCTGATCTTGGGATGAATCCTTTCAATTCGGGTTCGTGGATGGTGATGGAACTTGTAGCTTTGTTGTTTCAGTTAATCATCTCAGTTTTTACTCTTGCTATCTCACAGACTGAGAGGCCAATTTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGTTTTCTTTGCTTATTGCTTCTTTACTGCCGCCATCGGTTTCATCATCAAATTCTGGAAGATGGTAATAGTCTTTCGGACATCGAACAGCAGAGGAACGATGGATCAATGAGGTACTCACATTTGATAAACAGATGTCGAACGTCTCTCGATCTTTTCTTTGCAATATGGTTTGTAATGGGCAATCTTTGGGTCTTCGATTCTCGATTTGCCTCGTTCCAAAGTGCTCCAAAACTTCATCTACTATGCAGCTTCCTGCTAGTTTTGAATGCCATTTGGTACTCTTTTCCATTCATTCTGTTTCTGCTGCTTTGTTGCTGTGTGCCATTGGTTAGTAGCCTTATAGGATATAACATTAACATGGGATCAACTGAAAGAGGAGCGTCGGATGATCAAATTTCTCAACTTCCTTGCTGGAAATACAAAGCCGTCGACGTCAACATCAATCTCGAAATTCAACCTGATAATAGCAATACAGGACGACTTCCAAAAGAGGATCCAGAATGTTGTATCTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAATTACCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAATGGCTTGCTATTTCATCTTCATGCCCTCTTTGTAAGCAACAACTTCAAAGATAG

Protein sequence

MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRARWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWPMRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDIEQQRNDGSMRYSHLINRCRTSLDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCCVPLVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQR

Homology

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BLAST of Sed0004744 vs. NCBI nr
Match: XP_022940226.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata])

HSP 1 Score: 607.1 bits (1564), Expect = 9.7e-170
Identity = 293/346 (84.68%), Postives = 312/346 (90.17%), Query Frame = 0


Query: 1   MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRA 60
           MIHSGFFL GPSF+ DATT FI + +S EDGA+ADD RND+SGSLPPSFWVR AMRVSRA
Sbjct: 1   MIHSGFFLAGPSFNSDATTSFISSTVSGEDGATADDTRNDTSGSLPPSFWVRTAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWP 120
           RWFIFLRRVFHYQNGSRSDLG NPFNSGSWM MELVALLFQLIISVFTLAISQTE+P+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISVFTLAISQTEKPVWP 120

Query: 121 MRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDIEQQRNDGSMRYSHLINRCRTS 180
           MRLWI GYDLGC L LLLL  RHR  + +  D NSLSDIE Q ++ S RYSHLINRCRT 
Sbjct: 121 MRLWIAGYDLGCVLSLLLLCGRHRCRYLMQGDSNSLSDIEHQSSNESSRYSHLINRCRTF 180

Query: 181 LDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCCVP 240
           LDLFFAIWFVMGNLW+FDSRFASFQ APKLHLLCSF+LV NAI YSFPF LFLLLCCCVP
Sbjct: 181 LDLFFAIWFVMGNLWIFDSRFASFQGAPKLHLLCSFVLVWNAICYSFPFFLFLLLCCCVP 240

Query: 241 LVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDPEC 300
           ++SSLIGYNINMGSTE+GA DDQISQLPCWKYK VDVNINL IQPDNSNTG LPKEDPEC
Sbjct: 241 VISSLIGYNINMGSTEKGALDDQISQLPCWKYKVVDVNINLGIQPDNSNTG-LPKEDPEC 300

Query: 301 CICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQR 347
           CICLAKYIDKE+VRQLPCSHVFHL+CVDKWLAI+SSCPLCKQQLQR
Sbjct: 301 CICLAKYIDKEDVRQLPCSHVFHLRCVDKWLAIASSCPLCKQQLQR 345

[Close]

BLAST of Sed0004744 vs. NCBI nr
Match: KAG7037312.1 (E3 ubiquitin-protein ligase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 605.5 bits (1560), Expect = 2.8e-169
Identity = 292/346 (84.39%), Postives = 312/346 (90.17%), Query Frame = 0


Query: 1   MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRA 60
           MIHSGFFL GPSF+ DATT FI + +S EDGA+ADD RND+SGSLPPSFWVR AMRVSRA
Sbjct: 1   MIHSGFFLAGPSFNSDATTSFISSTVSGEDGATADDTRNDTSGSLPPSFWVRTAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWP 120
           RWFIFLRRVFHYQNGSRSDLG NPFNSGSWM MELVALLFQLIISVFTLAISQTE+P+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISVFTLAISQTEKPVWP 120

Query: 121 MRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDIEQQRNDGSMRYSHLINRCRTS 180
           MRLWI GYDLGC L LLLL  RH+  + +  D NSLSDIE Q ++ S RYSHLINRCRT 
Sbjct: 121 MRLWIAGYDLGCVLSLLLLCGRHQCRYLMQGDSNSLSDIEHQSSNESSRYSHLINRCRTF 180

Query: 181 LDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCCVP 240
           LDLFFAIWFVMGNLW+FDSRFASFQ APKLHLLCSF+LV NAI YSFPF LFLLLCCCVP
Sbjct: 181 LDLFFAIWFVMGNLWIFDSRFASFQGAPKLHLLCSFVLVWNAICYSFPFFLFLLLCCCVP 240

Query: 241 LVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDPEC 300
           ++SSLIGYNINMGSTE+GA DDQISQLPCWKYK VDVNINL IQPDNSNTG LPKEDPEC
Sbjct: 241 VISSLIGYNINMGSTEKGALDDQISQLPCWKYKVVDVNINLGIQPDNSNTG-LPKEDPEC 300

Query: 301 CICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQR 347
           CICLAKYIDKE+VRQLPCSHVFHL+CVDKWLAI+SSCPLCKQQLQR
Sbjct: 301 CICLAKYIDKEDVRQLPCSHVFHLRCVDKWLAIASSCPLCKQQLQR 345

[Close]

BLAST of Sed0004744 vs. NCBI nr
Match: XP_023525203.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 604.0 bits (1556), Expect = 8.2e-169
Identity = 291/346 (84.10%), Postives = 311/346 (89.88%), Query Frame = 0


Query: 1   MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRA 60
           MIHSGFFL GPSF+ DATT FI + +S EDGA+ADD RND+SGSLPPSFWVR AMRVSRA
Sbjct: 1   MIHSGFFLAGPSFNSDATTSFISSTVSGEDGATADDTRNDTSGSLPPSFWVRTAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWP 120
           RWFIFLRRVFHYQNGSRSDLG NPFNSGSWM MELVAL FQLIISVFTLAISQTE+P+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALFFQLIISVFTLAISQTEKPVWP 120

Query: 121 MRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDIEQQRNDGSMRYSHLINRCRTS 180
           MRLWI GYDLGC L LLLL  RHR  + +  D NSLSDIE Q ++ S RYSHLINRCRT 
Sbjct: 121 MRLWIAGYDLGCVLSLLLLCGRHRCRYLMQGDSNSLSDIEHQSSNESSRYSHLINRCRTF 180

Query: 181 LDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCCVP 240
           LDLFFAIWFVMGNLW+FDSRFASFQ APKLHLLCSF+LV NAI YSFPF LFLLLCCCVP
Sbjct: 181 LDLFFAIWFVMGNLWIFDSRFASFQRAPKLHLLCSFVLVWNAICYSFPFFLFLLLCCCVP 240

Query: 241 LVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDPEC 300
           ++SSLIGYNINMGSTE+GA DDQISQLPCWKYK VDVNINL IQPDN+NTG LPKEDPEC
Sbjct: 241 VISSLIGYNINMGSTEKGALDDQISQLPCWKYKVVDVNINLGIQPDNTNTG-LPKEDPEC 300

Query: 301 CICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQR 347
           CICLAKYIDKE+VRQLPCSHVFHL+CVDKWLAI+SSCPLCKQQLQR
Sbjct: 301 CICLAKYIDKEDVRQLPCSHVFHLRCVDKWLAIASSCPLCKQQLQR 345

[Close]

BLAST of Sed0004744 vs. NCBI nr
Match: XP_022981533.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita maxima])

HSP 1 Score: 599.0 bits (1543), Expect = 2.6e-167
Identity = 289/346 (83.53%), Postives = 308/346 (89.02%), Query Frame = 0


Query: 1   MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRA 60
           MIHSGFFL GPSF+ DATT FI + +S EDGA+ADD RND+SGSLPP FWV  AMRVSRA
Sbjct: 1   MIHSGFFLAGPSFNSDATTSFISSTVSGEDGATADDTRNDTSGSLPPPFWVGTAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWP 120
           RWFIFLRRVFHYQNGSRSDLG NPFNSGSWM MELVALL  LIISVFTLAISQTE+P+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLCHLIISVFTLAISQTEKPVWP 120

Query: 121 MRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDIEQQRNDGSMRYSHLINRCRTS 180
           MRLWI GYDLGC L LLLLY RHR  + +  D NSLSDIE Q ++ S RYSHLINRCRT 
Sbjct: 121 MRLWIAGYDLGCVLSLLLLYGRHRCRYLMQGDSNSLSDIEHQSSNESSRYSHLINRCRTF 180

Query: 181 LDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCCVP 240
           LDLFFAIWFVMGNLW+FDSRFASFQ APKLHLLCSF+LV NAI YSFPF LFLLLCCCVP
Sbjct: 181 LDLFFAIWFVMGNLWIFDSRFASFQRAPKLHLLCSFVLVWNAICYSFPFFLFLLLCCCVP 240

Query: 241 LVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDPEC 300
           ++SS IGYNINMGSTE+GA DDQISQLPCWKYK VDVNINL IQPDNSNTG LPKEDPEC
Sbjct: 241 VISSFIGYNINMGSTEKGALDDQISQLPCWKYKVVDVNINLGIQPDNSNTG-LPKEDPEC 300

Query: 301 CICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQR 347
           CICLAKYIDKE+VRQLPCSHVFHL+CVDKWLAI+SSCPLCKQQLQR
Sbjct: 301 CICLAKYIDKEDVRQLPCSHVFHLRCVDKWLAIASSCPLCKQQLQR 345

[Close]

BLAST of Sed0004744 vs. NCBI nr
Match: XP_038899145.1 (E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida])

HSP 1 Score: 598.2 bits (1541), Expect = 4.5e-167
Identity = 290/347 (83.57%), Postives = 309/347 (89.05%), Query Frame = 0


Query: 1   MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRA 60
           MIHSGFFL GPSF+ D TT FI  P+S EDGA AD+I N +S S+PPSFWVRMAM++SRA
Sbjct: 1   MIHSGFFLSGPSFNSDVTTSFISIPVSGEDGARADEISNHTSDSIPPSFWVRMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWP 120
           RWFIFLRR+FHYQNGSRSDLG NPFNSG WM MELVALLFQLIIS FTLAISQ ERP+WP
Sbjct: 61  RWFIFLRRIFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISAFTLAISQAERPVWP 120

Query: 121 MRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDI--EQQRNDGSMRYSHLINRCR 180
           MRLWIGGYDLGC L LLLLY RHR+H+    DGNSLSDI  EQQR++ S RYSHL+N+CR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLTQGDGNSLSDIEHEQQRSNESSRYSHLMNKCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLWVFDSR ASFQ APKLHLLCSFLLV NAI YSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDP 300
           VPL SSLIGYNINMGSTE+GA DDQISQLPCW+YKAV+ NIN   QPDNSNTG LPKEDP
Sbjct: 241 VPLTSSLIGYNINMGSTEKGALDDQISQLPCWRYKAVETNINPGSQPDNSNTG-LPKEDP 300

Query: 301 ECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQ 346
           ECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAI+SSCPLCKQQLQ
Sbjct: 301 ECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQ 346

[Close]

BLAST of Sed0004744 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.6e-29
Identity = 87/267 (32.58%), Postives = 136/267 (50.94%), Query Frame = 0


Query: 104 ISVFTLAISQTERPIWPMRLWIGGYDLGCFL---CLLLLYCRHRFHHQILEDGN------ 163
           I V  L +S+ E+P  P+R+W+ GY + C+L   C+ + Y R R   +  EDG       
Sbjct: 123 IGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEY-RRRRRRRHPEDGGGSGLTN 182

Query: 164 -------SLSDIEQQRNDGSMRYSHLINRCRTSLDLFFAIWFVMGNLWVFDSRFASFQSA 223
                  SL+ +E  R + S    HL     ++  +F  IW+++G  WV          +
Sbjct: 183 SSSQQYVSLAQLE-DRGETSNPAKHL----ESANTMFSFIWWIIGFYWVSAGGQTLSSDS 242

Query: 224 PKLHLLCSFLLVLNAIWYSF----PFILFLLLCCCVPLVSSLIGYNINMGSTERGASDDQ 283
           P+L+ LC   L  +  +  F      ++ L +CCC+P + +++ Y +   + + GAS + 
Sbjct: 243 PQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV---ADQEGASKND 302

Query: 284 ISQLPCWKY-KAVDV--------NINLEIQPDNSNTGRLPKEDPECCICLAKYIDKEEVR 342
           I Q+P +++ K  +V         I  E   D+     L  ED ECCICL +Y D  E+R
Sbjct: 303 IDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELR 362

[Close]

BLAST of Sed0004744 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 3.3e-27
Identity = 83/299 (27.76%), Postives = 138/299 (46.15%), Query Frame = 0


Query: 91  MVMELVALLFQLIISVFTLAISQTERPIWPMRLWIGGYDLGCFL---CLLLLYCRHRFHH 150
           +V++ V  L  ++++   L +S  E P  P+R+WI GY L C +   C+ + Y R     
Sbjct: 75  VVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRR 134

Query: 151 Q-------ILEDGNSLSDIEQQRNDGSMRYS---------------HLINRCRTSLDLFF 210
           +            +S S ++++   G  R S                      ++  +  
Sbjct: 135 RRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMIS 194

Query: 211 AIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSF----PFILFLLLCCCVPL 270
            IW+V+G  WV        Q +P+L+ LC   L  +  +  F      ++ + +CCC+P 
Sbjct: 195 FIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPC 254

Query: 271 VSSLIGYNINMGSTERGASDDQISQLPCWKYKAV----------------DVNINLEIQP 330
           + +++ Y +   + + GAS + I QL  +K++ V                   +  E   
Sbjct: 255 IIAVL-YAV---AEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGT 314

Query: 331 DNSNTGRLPKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQL 345
           D+     LP ED ECCICL+ Y D+ E+R+LPC H FH  CVDKWL I+++CPLCK  +
Sbjct: 315 DSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI 369

[Close]

BLAST of Sed0004744 vs. ExPASy Swiss-Prot
Match: Q8GUU2 (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.2e-26
Identity = 82/271 (30.26%), Postives = 126/271 (46.49%), Query Frame = 0


Query: 102 LIISVFTLAISQTERPIWPMRLWIGGYDLGCFLCLLLLYCRH-------------RFHHQ 161
           ++ S   L  +  ERP  P+R+WI  Y L C   ++L++  +              + H 
Sbjct: 89  VLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNSTRRARDLESYDH- 148

Query: 162 ILEDGNSLSDIEQQRNDGSMRYSHLINRCRTSLDLFFAIWFVMGNLWVFDSRFASFQSAP 221
             ED N   D EQ  +D S  YS  + RC +   +   IW+++G  WV +        AP
Sbjct: 149 --EDYNIEYDYEQDSDDNSTTYS-FVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEAP 208

Query: 222 KLHLLCSFLLVLNAIWYSFPFILFLL----LCCCVPLVSSLIGYNINMGSTERGASDDQI 281
            L+ L    L ++  +  F  +L  L    LCCC+P + +L+     +  TE G S+ ++
Sbjct: 209 NLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALL---YAVAGTE-GVSEAEL 268

Query: 282 SQLPCWKYKAVDVNINLEIQPDN-----------SNTGRLPKEDPECCICLAKYIDKEEV 341
             LP +K+KA   N      P             +    L  ED +CCICL+ Y D  E+
Sbjct: 269 GVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDADCCICLSSYEDGAEL 328

Query: 342 RQLPCSHVFHLKCVDKWLAISSSCPLCKQQL 345
             LPC+H FH  C+ KWL + ++CPLCK  +
Sbjct: 329 HALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351

[Close]

BLAST of Sed0004744 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.2e-26
Identity = 85/301 (28.24%), Postives = 143/301 (47.51%), Query Frame = 0


Query: 91  MVMELVALLFQLIISVFTLAISQTERPIWPMRLWIGGYDLGCFL---CLLLLYCRHRFHH 150
           +V+++V  L  + ++   L +S+ E PI P+R+W+ GY L C L   C+ + Y R     
Sbjct: 101 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 160

Query: 151 ------------QILEDGNSLSDIEQQ-----RNDG---------SMRYSHLINRCRTSL 210
                       +     +S S +E++     RN G             S +     ++ 
Sbjct: 161 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESAN 220

Query: 211 DLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSF----PFILFLLLCC 270
            +F  IW+++G  WV        Q +P+++ L    L  +  +  F      ++ + +CC
Sbjct: 221 TMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCC 280

Query: 271 CVPLVSSLIGYNINMGSTERGASDDQISQLPCWKYKAV-DVN-------------INLEI 330
           C+P + +++ Y +   + + GAS + I QL  +K++ + D N             I  E 
Sbjct: 281 CLPCIIAVL-YAV---ADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTEC 340

Query: 331 QPDNSNTGRLPKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQ 345
             D+     L +ED ECCICL+ Y D  E+R+LPC H FH  CVDKWL I+++CPLCK  
Sbjct: 341 GTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYN 397

[Close]

BLAST of Sed0004744 vs. ExPASy Swiss-Prot
Match: Q90ZT7 (E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis OX=8355 GN=rnf111-a PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-11
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 245 LIGYNINMGSTERGASDDQISQLPC-WKYKAVDVNINLEIQPDNSNTG-RLPKEDPE--C 304
           LI     +G+  RGAS   I +     KYK V  +   + +  +   G   P+ED E  C
Sbjct: 812 LIHLEERLGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKC 871

Query: 305 CICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCK 342
            ICL+   + E+VR+LPC H+FH  CVD+WL  +  CP+C+
Sbjct: 872 TICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 912

[Close]

BLAST of Sed0004744 vs. ExPASy TrEMBL
Match: A0A6J1FHW3 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC111445910 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 4.7e-170
Identity = 293/346 (84.68%), Postives = 312/346 (90.17%), Query Frame = 0


Query: 1   MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRA 60
           MIHSGFFL GPSF+ DATT FI + +S EDGA+ADD RND+SGSLPPSFWVR AMRVSRA
Sbjct: 1   MIHSGFFLAGPSFNSDATTSFISSTVSGEDGATADDTRNDTSGSLPPSFWVRTAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWP 120
           RWFIFLRRVFHYQNGSRSDLG NPFNSGSWM MELVALLFQLIISVFTLAISQTE+P+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISVFTLAISQTEKPVWP 120

Query: 121 MRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDIEQQRNDGSMRYSHLINRCRTS 180
           MRLWI GYDLGC L LLLL  RHR  + +  D NSLSDIE Q ++ S RYSHLINRCRT 
Sbjct: 121 MRLWIAGYDLGCVLSLLLLCGRHRCRYLMQGDSNSLSDIEHQSSNESSRYSHLINRCRTF 180

Query: 181 LDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCCVP 240
           LDLFFAIWFVMGNLW+FDSRFASFQ APKLHLLCSF+LV NAI YSFPF LFLLLCCCVP
Sbjct: 181 LDLFFAIWFVMGNLWIFDSRFASFQGAPKLHLLCSFVLVWNAICYSFPFFLFLLLCCCVP 240

Query: 241 LVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDPEC 300
           ++SSLIGYNINMGSTE+GA DDQISQLPCWKYK VDVNINL IQPDNSNTG LPKEDPEC
Sbjct: 241 VISSLIGYNINMGSTEKGALDDQISQLPCWKYKVVDVNINLGIQPDNSNTG-LPKEDPEC 300

Query: 301 CICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQR 347
           CICLAKYIDKE+VRQLPCSHVFHL+CVDKWLAI+SSCPLCKQQLQR
Sbjct: 301 CICLAKYIDKEDVRQLPCSHVFHLRCVDKWLAIASSCPLCKQQLQR 345

[Close]

BLAST of Sed0004744 vs. ExPASy TrEMBL
Match: A0A6J1J2C9 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111480623 PE=4 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.3e-167
Identity = 289/346 (83.53%), Postives = 308/346 (89.02%), Query Frame = 0


Query: 1   MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRA 60
           MIHSGFFL GPSF+ DATT FI + +S EDGA+ADD RND+SGSLPP FWV  AMRVSRA
Sbjct: 1   MIHSGFFLAGPSFNSDATTSFISSTVSGEDGATADDTRNDTSGSLPPPFWVGTAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWP 120
           RWFIFLRRVFHYQNGSRSDLG NPFNSGSWM MELVALL  LIISVFTLAISQTE+P+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLCHLIISVFTLAISQTEKPVWP 120

Query: 121 MRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDIEQQRNDGSMRYSHLINRCRTS 180
           MRLWI GYDLGC L LLLLY RHR  + +  D NSLSDIE Q ++ S RYSHLINRCRT 
Sbjct: 121 MRLWIAGYDLGCVLSLLLLYGRHRCRYLMQGDSNSLSDIEHQSSNESSRYSHLINRCRTF 180

Query: 181 LDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCCVP 240
           LDLFFAIWFVMGNLW+FDSRFASFQ APKLHLLCSF+LV NAI YSFPF LFLLLCCCVP
Sbjct: 181 LDLFFAIWFVMGNLWIFDSRFASFQRAPKLHLLCSFVLVWNAICYSFPFFLFLLLCCCVP 240

Query: 241 LVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDPEC 300
           ++SS IGYNINMGSTE+GA DDQISQLPCWKYK VDVNINL IQPDNSNTG LPKEDPEC
Sbjct: 241 VISSFIGYNINMGSTEKGALDDQISQLPCWKYKVVDVNINLGIQPDNSNTG-LPKEDPEC 300

Query: 301 CICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQR 347
           CICLAKYIDKE+VRQLPCSHVFHL+CVDKWLAI+SSCPLCKQQLQR
Sbjct: 301 CICLAKYIDKEDVRQLPCSHVFHLRCVDKWLAIASSCPLCKQQLQR 345

[Close]

BLAST of Sed0004744 vs. ExPASy TrEMBL
Match: A0A0A0K4H0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G278230 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.9e-167
Identity = 289/348 (83.05%), Postives = 310/348 (89.08%), Query Frame = 0


Query: 1   MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRA 60
           MIHSGFFL GPSF+ DATT FI   +S EDGA ADDIRN++S S+PPSFWV+MAM++SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWP 120
           RWFIFLRRVFHYQNGSRSDLG NPFNSGSWM MELVALLFQLIIS FTLAISQ E+P+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDI--EQQRNDGSMRYSHLINRCR 180
           MRLWIGGYDLGC L LLLLY RHR+H+ +  DGNSLSDI  EQQR + S RYSHL+NRCR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIEHEQQRTNESSRYSHLMNRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLW FDSR ASFQ APKLHLLCSFLLV NAI YSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDP 300
           VPL+SSL GYNIN GSTE+GASDDQISQLPCW+YKAV+ NIN   Q DNSNTG L KEDP
Sbjct: 241 VPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLL-KEDP 300

Query: 301 ECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQR 347
           ECCICLAKYIDKEEVRQLPCSHVFHL+CVDKWLAI+SSCPLCKQQLQR
Sbjct: 301 ECCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 347

[Close]

BLAST of Sed0004744 vs. ExPASy TrEMBL
Match: A0A1S3CI94 (E3 ubiquitin-protein ligase At4g11680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501269 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 1.1e-166
Identity = 289/348 (83.05%), Postives = 312/348 (89.66%), Query Frame = 0


Query: 1   MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRA 60
           MIHSGFFL GPSF+ DATT FI   +S EDGA ADDIRN++S S+PPSFWV+MAM++SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWP 120
           RWFIFLRRVFHYQNGSRSDLG NPFNSG WM MELVALLFQLIISVFTLAISQ E+P+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDI--EQQRNDGSMRYSHLINRCR 180
           MRLWIGGYDLGC L LLLLY RHR+H+ +  + N LSDI  EQQR++ S RYSHL+NRCR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLWVFDSR ASFQ APKLHLLCSFLLV NAI YSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDP 300
           VPL+SSL GYNINMGS+E+GASDDQISQLPCW+YKAV+ NIN   QPDNSNTG L KEDP
Sbjct: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLL-KEDP 300

Query: 301 ECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQR 347
           ECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAI+SSCPLCKQQLQR
Sbjct: 301 ECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 347

[Close]

BLAST of Sed0004744 vs. ExPASy TrEMBL
Match: A0A6J1CCU0 (E3 ubiquitin-protein ligase At1g63170 OS=Momordica charantia OX=3673 GN=LOC111010402 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.2e-160
Identity = 282/346 (81.50%), Postives = 305/346 (88.15%), Query Frame = 0


Query: 1   MIHSGFFLVGPSFSPDATTPFILTPLSREDGASADDIRNDSSGSLPPSFWVRMAMRVSRA 60
           MIHSGFFL GPSF+ DATT FI   +S +DGA+ADDIRN++S SLPPSFWVR AM+ SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEDDGATADDIRNETSDSLPPSFWVRTAMKASRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWP 120
           RWFIFLRRVFHYQNGSRSDLG NPFNS +WM MELVALLFQLIISVFTLAISQTERP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSSAWMAMELVALLFQLIISVFTLAISQTERPVWP 120

Query: 121 MRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDIEQQRNDGSMRYSHLINRCRTS 180
           MRLWIGGYDLGC L LLLLY R+R+ + +  DGNSL DIEQQR++ S RYSHL N+CRT 
Sbjct: 121 MRLWIGGYDLGCLLSLLLLYGRYRYLYLMQGDGNSLLDIEQQRSNESSRYSHLTNKCRTL 180

Query: 181 LDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIWYSFPFILFLLLCCCVP 240
           L+LFFAIWFVMGNLWVFDSRF SFQ APKLHLLCS LLV NAI YSFPFILFLLLCCCVP
Sbjct: 181 LELFFAIWFVMGNLWVFDSRFGSFQRAPKLHLLCSILLVWNAICYSFPFILFLLLCCCVP 240

Query: 241 LVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQPDNSNTGRLPKEDPEC 300
           L+SSLIGYN+NMGSTE+GASDDQISQLP W+YKAVD NI    QPD S+TG  PKEDPEC
Sbjct: 241 LISSLIGYNMNMGSTEKGASDDQISQLPSWRYKAVDSNIKPGNQPD-SHTGP-PKEDPEC 300

Query: 301 CICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQLQR 347
           CICLAKY DKEEVRQLPCSHVFH KCVDKWLAI+SSCPLCKQQLQR
Sbjct: 301 CICLAKYKDKEEVRQLPCSHVFHQKCVDKWLAITSSCPLCKQQLQR 344

[Close]

BLAST of Sed0004744 vs. TAIR 10
Match: AT5G55970.1 (RING/U-box superfamily protein )

HSP 1 Score: 412.9 bits (1060), Expect = 2.5e-115
Identity = 200/302 (66.23%), Postives = 235/302 (77.81%), Query Frame = 0


Query: 46  PPSFWVRMAMRVSRARWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIIS 105
           P SF++R+AM+VSRARWFIFLRRVFHYQNGSRSDLG NPFNS +WM+ EL+ALL QL + 
Sbjct: 47  PSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVI 106

Query: 106 VFTLAISQTERPIWPMRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDIE-QQRN 165
            FTLAIS+ ERPIWP+RLWI GYD+GC L L+LLY R+R       +G  L D+E QQR 
Sbjct: 107 TFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQRG 166

Query: 166 DGSMRYSHLINRCRTSLDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIW 225
               R SHL+N+CRTSL+LFFAIWFV+GN+WVFDSRF SF  APKLH+LC  LL  NAI 
Sbjct: 167 REETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAIC 226

Query: 226 YSFPFILFLLLCCCVPLVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQ 285
           YSFPF+LFL LCC VPL+SSL+GYN+NMGS++R ASDDQIS LP WK+K +D     +  
Sbjct: 227 YSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRID-----DSA 286

Query: 286 PDNSNTGRLPKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQL 345
            D+ +      +DPECCICLAKY DKEEVR+LPCSH FH KCVD+WL I S CPLCKQ L
Sbjct: 287 SDSDSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 343

Query: 346 QR 347
            R
Sbjct: 347 PR 343

[Close]

BLAST of Sed0004744 vs. TAIR 10
Match: AT5G55970.2 (RING/U-box superfamily protein )

HSP 1 Score: 412.9 bits (1060), Expect = 2.5e-115
Identity = 200/302 (66.23%), Postives = 235/302 (77.81%), Query Frame = 0


Query: 46  PPSFWVRMAMRVSRARWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVMELVALLFQLIIS 105
           P SF++R+AM+VSRARWFIFLRRVFHYQNGSRSDLG NPFNS +WM+ EL+ALL QL + 
Sbjct: 47  PSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVI 106

Query: 106 VFTLAISQTERPIWPMRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGNSLSDIE-QQRN 165
            FTLAIS+ ERPIWP+RLWI GYD+GC L L+LLY R+R       +G  L D+E QQR 
Sbjct: 107 TFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQRG 166

Query: 166 DGSMRYSHLINRCRTSLDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLVLNAIW 225
               R SHL+N+CRTSL+LFFAIWFV+GN+WVFDSRF SF  APKLH+LC  LL  NAI 
Sbjct: 167 REETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAIC 226

Query: 226 YSFPFILFLLLCCCVPLVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNINLEIQ 285
           YSFPF+LFL LCC VPL+SSL+GYN+NMGS++R ASDDQIS LP WK+K +D     +  
Sbjct: 227 YSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRID-----DSA 286

Query: 286 PDNSNTGRLPKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAISSSCPLCKQQL 345
            D+ +      +DPECCICLAKY DKEEVR+LPCSH FH KCVD+WL I S CPLCKQ L
Sbjct: 287 SDSDSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 343

Query: 346 QR 347
            R
Sbjct: 347 PR 343

[Close]

BLAST of Sed0004744 vs. TAIR 10
Match: AT4G26580.1 (RING/U-box superfamily protein )

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-111
Identity = 196/312 (62.82%), Postives = 234/312 (75.00%), Query Frame = 0


Query: 35  DDIRNDSSGSLPPSFWVRMAMRVSRARWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVME 94
           D+       S   SF++R+AMRVSRARWFIFLRRVFHYQN SRSDLG NPFNS +WMV E
Sbjct: 32  DNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQNASRSDLGTNPFNSIAWMVSE 91

Query: 95  LVALLFQLIISVFTLAISQTERPIWPMRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGN 154
           L+ALL Q+ +   TLA+S+ ERP+WPMRLWI GY++GC L L+LLY R+R      E+  
Sbjct: 92  LIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHENAF 151

Query: 155 SLSDIEQQR--NDGSMRYSHLINRCRTSLDLFFAIWFVMGNLWVFDSRFASFQSAPKLHL 214
           S  DIEQQ+   + + R SHL+N+CRTSL+LFFAIWFV+GN+WVFDSRF SF  AP LH+
Sbjct: 152 SFGDIEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAPILHV 211

Query: 215 LCSFLLVLNAIWYSFPFILFLLLCCCVPLVSSLIGYNINMGSTERGASDDQISQLPCWKY 274
           LC  LL  NA+ YSFPF+LFLLLCC VPLVSS +GYN+N+GS+E+GASDDQIS LP WKY
Sbjct: 212 LCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSLPSWKY 271

Query: 275 KAVDVNINLEIQPDNSNTGRLPKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLA 334
           K +          D ++       DPECCICLAKY +KEEVR+LPCSH FHLKCVD+WL 
Sbjct: 272 KLI----------DETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLR 331

Query: 335 ISSSCPLCKQQL 345
           I S CPLCKQ L
Sbjct: 332 IISCCPLCKQDL 333

[Close]

BLAST of Sed0004744 vs. TAIR 10
Match: AT4G26580.2 (RING/U-box superfamily protein )

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-111
Identity = 196/312 (62.82%), Postives = 234/312 (75.00%), Query Frame = 0


Query: 35  DDIRNDSSGSLPPSFWVRMAMRVSRARWFIFLRRVFHYQNGSRSDLGMNPFNSGSWMVME 94
           D+       S   SF++R+AMRVSRARWFIFLRRVFHYQN SRSDLG NPFNS +WMV E
Sbjct: 32  DNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQNASRSDLGTNPFNSIAWMVSE 91

Query: 95  LVALLFQLIISVFTLAISQTERPIWPMRLWIGGYDLGCFLCLLLLYCRHRFHHQILEDGN 154
           L+ALL Q+ +   TLA+S+ ERP+WPMRLWI GY++GC L L+LLY R+R      E+  
Sbjct: 92  LIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHENAF 151

Query: 155 SLSDIEQQR--NDGSMRYSHLINRCRTSLDLFFAIWFVMGNLWVFDSRFASFQSAPKLHL 214
           S  DIEQQ+   + + R SHL+N+CRTSL+LFFAIWFV+GN+WVFDSRF SF  AP LH+
Sbjct: 152 SFGDIEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAPILHV 211

Query: 215 LCSFLLVLNAIWYSFPFILFLLLCCCVPLVSSLIGYNINMGSTERGASDDQISQLPCWKY 274
           LC  LL  NA+ YSFPF+LFLLLCC VPLVSS +GYN+N+GS+E+GASDDQIS LP WKY
Sbjct: 212 LCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSLPSWKY 271

Query: 275 KAVDVNINLEIQPDNSNTGRLPKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLA 334
           K +          D ++       DPECCICLAKY +KEEVR+LPCSH FHLKCVD+WL 
Sbjct: 272 KLI----------DETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLR 331

Query: 335 ISSSCPLCKQQL 345
           I S CPLCKQ L
Sbjct: 332 IISCCPLCKQDL 333

[Close]

BLAST of Sed0004744 vs. TAIR 10
Match: AT1G80400.1 (RING/U-box superfamily protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.4e-49
Identity = 108/314 (34.39%), Postives = 167/314 (53.18%), Query Frame = 0


Query: 74  NGSRSDLGMNPFNSGSWMVMELVALLFQLIISVFTLAISQTERPIWPMRLWIGGYDLGCF 133
           NG R+    +P NSG W+ +ELV  + Q++ ++  + +++ E P  P+  W+ GY  GC 
Sbjct: 92  NGRRT---RSPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCL 151

Query: 134 LCLLLLYCRHRFHHQILEDGNSLSDIEQQRNDGSMRY----------------------- 193
             L +LY R R +++     +S      Q N  S  Y                       
Sbjct: 152 ATLPILYWRFRTYNRATGQDSSQRATSSQGNSESTPYTAVSVAQAADEENSTGVSAAPRN 211

Query: 194 -----------SHLINRCRTSLDLFFAIWFVMGNLWVFDSRFASFQSAPKLHLLCSFLLV 253
                      + L++  + ++D FFA+WFV+GN+W+F    +S   +PKL+ LC   L 
Sbjct: 212 NQVGESLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIFGGH-SSPSDSPKLYRLCIAFLT 271

Query: 254 LNAIWYSFPFILFLLLCCCVPLVSSLIGYNINMGSTERGASDDQISQLPCWKYKAVDVNI 313
            + I Y+ PFIL   +CCC+P + S++G+  N   T RGA+ + I+ LP +++K+   N 
Sbjct: 272 FSCIGYAMPFILCATICCCLPCLISVLGFRENFSQT-RGATAEAINALPVYRFKSKSRN- 331

Query: 314 NLEIQPD--------NSNTGRL-PKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKW 345
           +LE   +         S   RL   ED  CCICL +Y D E+VR+LPCSHVFH+ CVDKW
Sbjct: 332 DLEFSEEGEGGFLLLGSQKKRLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKW 391

The following BLAST results are available for this feature:

BLAST of Sed0004744 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940226.1	9.7e-170	84.68	E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata]	[more]
KAG7037312.1	2.8e-169	84.39	E3 ubiquitin-protein ligase [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023525203.1	8.2e-169	84.10	E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981533.1	2.6e-167	83.53	E3 ubiquitin-protein ligase At1g63170-like [Cucurbita maxima]	[more]
XP_038899145.1	4.5e-167	83.57	E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida]	[more]

BLAST of Sed0004744 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z92	4.6e-29	32.58	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116...	[more]
Q8LDB8	3.3e-27	27.76	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631...	[more]
Q8GUU2	1.2e-26	30.26	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV...	[more]
Q9LN71	6.2e-26	28.24	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127...	[more]
Q90ZT7	2.5e-11	37.62	E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis OX=8355 GN=rn...	[more]

BLAST of Sed0004744 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHW3	4.7e-170	84.68	E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1J2C9	1.3e-167	83.53	E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0K4H0	4.9e-167	83.05	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G278230 P...	[more]
A0A1S3CI94	1.1e-166	83.05	E3 ubiquitin-protein ligase At4g11680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1CCU0	1.2e-160	81.50	E3 ubiquitin-protein ligase At1g63170 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of Sed0004744 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55970.1	2.5e-115	66.23	RING/U-box superfamily protein	[more]
AT5G55970.2	2.5e-115	66.23	RING/U-box superfamily protein	[more]
AT4G26580.1	1.3e-111	62.82	RING/U-box superfamily protein	[more]
AT4G26580.2	1.3e-111	62.82	RING/U-box superfamily protein	[more]
AT1G80400.1	2.4e-49	34.39	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46225	C3H4 TYPE ZINC FINGER PROTEIN	coord: 32..280
None	No IPR available	PANTHER	PTHR46225:SF1	RING/U-BOX SUPERFAMILY PROTEIN	coord: 32..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004744.1	Sed0004744.1	mRNA
Sed0004744.2	Sed0004744.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding