Sed0004723 (gene) Chayote v1

Overview
NameSed0004723
Typegene
OrganismSechium edule (Chayote v1)
DescriptionAllyl alcohol dehydrogenase-like protein
LocationLG01: 69707756 .. 69708052 (+)
RNA-Seq ExpressionSed0004723
SyntenySed0004723
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCTTCTCTCATGGTGGAAAGGCGAATCGGCGCCGTCGGAATCCAGCCCTAAGCCGCAGCCTCTTCAGAAGAGCGTCTCTCCCCCGGCGGAAGTCCCTGGCCTCAACGGCGCCGTCCAAGTCCCCCGGCCTGCCGCCACCGTCACGGTCTTCGAGTTCGGCTCTGTCTCTTCTTCCTCCGATGAGGTCACTCTCGCCGGTTACTGTCCCGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATCCTGCCCGCCACCGGCTCCGAAGCGCCCCTCTTCCGCGTCGTCTTCTGA

mRNA sequence

ATGGGGCTTCTCTCATGGTGGAAAGGCGAATCGGCGCCGTCGGAATCCAGCCCTAAGCCGCAGCCTCTTCAGAAGAGCGTCTCTCCCCCGGCGGAAGTCCCTGGCCTCAACGGCGCCGTCCAAGTCCCCCGGCCTGCCGCCACCGTCACGGTCTTCGAGTTCGGCTCTGTCTCTTCTTCCTCCGATGAGGTCACTCTCGCCGGTTACTGTCCCGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATCCTGCCCGCCACCGGCTCCGAAGCGCCCCTCTTCCGCGTCGTCTTCTGA

Coding sequence (CDS)

ATGGGGCTTCTCTCATGGTGGAAAGGCGAATCGGCGCCGTCGGAATCCAGCCCTAAGCCGCAGCCTCTTCAGAAGAGCGTCTCTCCCCCGGCGGAAGTCCCTGGCCTCAACGGCGCCGTCCAAGTCCCCCGGCCTGCCGCCACCGTCACGGTCTTCGAGTTCGGCTCTGTCTCTTCTTCCTCCGATGAGGTCACTCTCGCCGGTTACTGTCCCGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATCCTGCCCGCCACCGGCTCCGAAGCGCCCCTCTTCCGCGTCGTCTTCTGA

Protein sequence

MGLLSWWKGESAPSESSPKPQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSSSSDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF
Homology
BLAST of Sed0004723 vs. NCBI nr
Match: XP_038886991.1 (uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 uncharacterized protein LOC120077159 [Benincasa hispida])

HSP 1 Score: 177.6 bits (449), Expect = 5.4e-41
Identity = 85/98 (86.73%), Postives = 93/98 (94.90%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSESSPKPQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG+S PS+S+ KP P QK+VS PAEVPGLNGAV+VPRPAATVTVFEFGSVSSS
Sbjct: 1  MGLLSWWKGQSPPSDSNSKPPPPQKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60

Query: 61 SDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          SD+VTLAGYCPVSDDLEPCRWEILPA+GS+APLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

BLAST of Sed0004723 vs. NCBI nr
Match: XP_022952897.1 (uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothetical protein SDJN02_26421, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40
Identity = 85/98 (86.73%), Postives = 91/98 (92.86%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSESSPKPQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAPSES+ KPQP  K+VS PAEVPGLNGAV+VPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPA+GS+APLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

BLAST of Sed0004723 vs. NCBI nr
Match: XP_023554244.1 (uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.1 bits (440), Expect = 6.0e-40
Identity = 84/98 (85.71%), Postives = 90/98 (91.84%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSESSPKPQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAPSES+ KPQP  K+VS P EVPGLNGAV+VPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPPEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPA+GS+APLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

BLAST of Sed0004723 vs. NCBI nr
Match: XP_022972011.1 (uncharacterized protein LOC111470658 [Cucurbita maxima])

HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39
Identity = 84/98 (85.71%), Postives = 90/98 (91.84%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSESSPKPQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAPSES+ K QP  K+VS PAEVPGLNGAV+VPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPA+GS+APLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

BLAST of Sed0004723 vs. NCBI nr
Match: XP_022157409.1 (uncharacterized protein LOC111024112 [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 8.6e-39
Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSESSPKPQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKGE+APSES+ KPQP   +VS PAEVPGLNGAV+VPRP  +VTVFEFGSVSSS
Sbjct: 1  MGLLSWWKGEAAPSESNSKPQPPLXNVSQPAEVPGLNGAVEVPRP-GSVTVFEFGSVSSS 60

Query: 61 SDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          SD+VTLAGYCPVSDDLEPCRWEILPATGS+APLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPATGSDAPLFRVVF 97

BLAST of Sed0004723 vs. ExPASy TrEMBL
Match: A0A6J1GLN4 (uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC111455443 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.6e-41
Identity = 85/98 (86.73%), Postives = 91/98 (92.86%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSESSPKPQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAPSES+ KPQP  K+VS PAEVPGLNGAV+VPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPA+GS+APLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

BLAST of Sed0004723 vs. ExPASy TrEMBL
Match: A0A6J1I4S4 (uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.4e-40
Identity = 84/98 (85.71%), Postives = 90/98 (91.84%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSESSPKPQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAPSES+ K QP  K+VS PAEVPGLNGAV+VPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPA+GS+APLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

BLAST of Sed0004723 vs. ExPASy TrEMBL
Match: A0A6J1DWE4 (uncharacterized protein LOC111024112 OS=Momordica charantia OX=3673 GN=LOC111024112 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.2e-39
Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSESSPKPQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKGE+APSES+ KPQP   +VS PAEVPGLNGAV+VPRP  +VTVFEFGSVSSS
Sbjct: 1  MGLLSWWKGEAAPSESNSKPQPPLXNVSQPAEVPGLNGAVEVPRP-GSVTVFEFGSVSSS 60

Query: 61 SDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          SD+VTLAGYCPVSDDLEPCRWEILPATGS+APLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPATGSDAPLFRVVF 97

BLAST of Sed0004723 vs. ExPASy TrEMBL
Match: A0A5D3E692 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004090 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.3e-37
Identity = 77/99 (77.78%), Postives = 92/99 (92.93%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSESSPK-PQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSS 60
          MGLLSWWKG+S PS+S+ K PQP  K++S PAEVPGLNGA++VPRPAA+VTVFEFGSV++
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          SSD+VTLAGYCPVSDD EPCRWEI+PA+GS+APLFR+VF
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

BLAST of Sed0004723 vs. ExPASy TrEMBL
Match: A0A1S3CQC7 (uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.3e-37
Identity = 77/99 (77.78%), Postives = 92/99 (92.93%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSESSPK-PQPLQKSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSVSS 60
          MGLLSWWKG+S PS+S+ K PQP  K++S PAEVPGLNGA++VPRPAA+VTVFEFGSV++
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          SSD+VTLAGYCPVSDD EPCRWEI+PA+GS+APLFR+VF
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

BLAST of Sed0004723 vs. TAIR 10
Match: AT3G59840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 1.5e-28
Identity = 64/101 (63.37%), Postives = 78/101 (77.23%), Query Frame = 0

Query: 1  MGLLSWWKGESAPSES-SPKPQPLQ--KSVSPPAEVPGLNGAVQVPRPAATVTVFEFGSV 60
          MG+LSW+ G   PS+S + KP+ +Q  KS +P    PG+NGA++VPRP    TVFEFGSV
Sbjct: 1  MGILSWFTGSPKPSQSETSKPEMIQMPKSETP---APGMNGAIEVPRP-DRATVFEFGSV 60

Query: 61 SSSSDEVTLAGYCPVSDDLEPCRWEILPATGSEAPLFRVVF 99
          +++ D VTLAGYCPVSDDLEPCRWEILPA G +AP FRVVF
Sbjct: 61 AATGDRVTLAGYCPVSDDLEPCRWEILPADGKDAPQFRVVF 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038886991.15.4e-4186.73uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 unchara... [more]
XP_022952897.11.6e-4086.73uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothet... [more]
XP_023554244.16.0e-4085.71uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo][more]
XP_022972011.11.3e-3985.71uncharacterized protein LOC111470658 [Cucurbita maxima][more]
XP_022157409.18.6e-3985.71uncharacterized protein LOC111024112 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GLN47.6e-4186.73uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC1114554... [more]
A0A6J1I4S46.4e-4085.71uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658... [more]
A0A6J1DWE44.2e-3985.71uncharacterized protein LOC111024112 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5D3E6922.3e-3777.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CQC72.3e-3777.78uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=... [more]
Match NameE-valueIdentityDescription
AT3G59840.11.5e-2863.37unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0004723.1Sed0004723.1mRNA