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Sed0004621 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGACATGGACGACCTTGCAGCTTCGGTCTCTGCCTCCGGGGACGATGCCAAGTCGTGCCCCCGAGGACACTGGCGCCCGGCCGAGGACGAGAAGCTTCAAAAGCTCGTTCAGCAGTACGGCCCGCAGAATTGGAACTCGATTGCAGAGAAACTACAAGGAAGATCAGGCATGCATTTTCCTGTTTTTGTTTGTCCTTGTTTCTTGTTCAAAATAGTTGATATTTCCTTTTGAAATAAAAAAAAAAGTGAATCAACTTCTACGATTTTTAATTCTTTTTTTAAAAAATCAAGTTTACATGTTTCCAACCTAAAATTCACTACAAAATCTATTCTGTTTGATTTAGTTTTTTTAGTTCAATTAGGGAACGGATTCGAACGCATGACTTTTTTCTTAGCTATTTGATATTTAGTTTTTAATATTTATCATGTATTAGAATTAGGATAACCTATTGTGCTTTTCTTTTTTTTTACAATTTTGGGAATAGGGGGTTGAAACTTATAACCTCTTTTTTACTAGGTTGTACATGATATGGTAAGAACTTTGTGGCATCGACTTAAAGTTTTTGGATTGATTGGTAATTTTAAATAATTCTATACCTTTTTCTTAATTTTTTTTTTATCTGTGATTATCCGAATTAGTTTAGAGAATTAATTTTAGGTAGGTGTTGTTACTATAGATTGAATTTATCACCTCTTAGCACCATCTTAGCCACTAAACCATTTCATGAAGATTGTAATTCAATATAGTATCAGAATAGCCGTTTGAGTCTCTGGCAAGTTATTTCCTTTCTAATTAATATTAATTTCCATTTTTTTAGGTTGATTTGTGGTTTAAGATAATTCATCCATACATTTAAAAGCTTAGAGATATAAAAGTTAGTAATTTGATTTTTTTTCTTAAAAAAAAAACTTACAAAAATCATCCAAACCCAAAAACTTCACACAACCACAATAACTCAAAAAATATGTTGAAAGTAAGCATATATTATAGGTCAAGACAATAGGGCAAGAAACACATTAGGAAAAAAAAAAGAAACATGGTCAAATCTTTTAACCTAGTACAAAGGTTTTTTCTTAAGAGCTAAAGTTTTGATACAGGAAAAAGTTGCAGGTTAAGATGGTTCAATCAACTGGATCCAAGAATTAACAGAAGGCCATTCACAGATGAAGAAGAAGAGAGACTTTTAACGGCGCATCGAATCCATGGCAACAAATGGGCATTAATCGCAAGGCTTTTCCCCGGAAGAACCGATAACGCCGTCAAAAATCATTGGCATGTAATAATGGCCAGAAAACAAAGACAACAATCCAACCTCGGAGGAAACAAGAGATCATACAAACATTTTTTCTCCAATTCTAAAATCTCTCCGGTGCCAACGACAATGAGTAAAGCAAGATCGTACATCCGCGACTGCAATGACGACCAATTATTAGGTAGATTTTGTGAGCTTCGATACCGTCATAACAGTCATTGGAATTGTTTACCAGCTACGGACTTGTTCTTCCGATGCTATCCGAATTCGATCAGAATCGAAAGCGATTTGAGGAGTTTTAGAGACAATCGATCGAAATCGATGATTAATTTTGAGGTTGTGAATGAATTAAATAAGAAGAAGGATGTTAAGTTCATAGATTTTCTTGGGGTTGAACAGTGAAAAAGAGGTCTATGAGACATTATCATATATATATATCTTATTTTGTTATATGTATATAGAAATT CCGACATGGACGACCTTGCAGCTTCGGTCTCTGCCTCCGGGGACGATGCCAAGTCGTGCCCCCGAGGACACTGGCGCCCGGCCGAGGACGAGAAGCTTCAAAAGCTCGTTCAGCAGTACGGCCCGCAGAATTGGAACTCGATTGCAGAGAAACTACAAGGAAGATCAGGAAAAAGTTGCAGGTTAAGATGGTTCAATCAACTGGATCCAAGAATTAACAGAAGGCCATTCACAGATGAAGAAGAAGAGAGACTTTTAACGGCGCATCGAATCCATGGCAACAAATGGGCATTAATCGCAAGGCTTTTCCCCGGAAGAACCGATAACGCCGTCAAAAATCATTGGCATGTAATAATGGCCAGAAAACAAAGACAACAATCCAACCTCGGAGGAAACAAGAGATCATACAAACATTTTTTCTCCAATTCTAAAATCTCTCCGGTGCCAACGACAATGAGTAAAGCAAGATCGTACATCCGCGACTGCAATGACGACCAATTATTAGGTAGATTTTGTGAGCTTCGATACCGTCATAACAGTCATTGGAATTGTTTACCAGCTACGGACTTGTTCTTCCGATGCTATCCGAATTCGATCAGAATCGAAAGCGATTTGAGGAGTTTTAGAGACAATCGATCGAAATCGATGATTAATTTTGAGGTTGTGAATGAATTAAATAAGAAGAAGGATGTTAAGTTCATAGATTTTCTTGGGGTTGAACAGTGAAAAAGAGGTCTATGAGACATTATCATATATATATATCTTATTTTGTTATATGTATATAGAAATT ATGGACGACCTTGCAGCTTCGGTCTCTGCCTCCGGGGACGATGCCAAGTCGTGCCCCCGAGGACACTGGCGCCCGGCCGAGGACGAGAAGCTTCAAAAGCTCGTTCAGCAGTACGGCCCGCAGAATTGGAACTCGATTGCAGAGAAACTACAAGGAAGATCAGGAAAAAGTTGCAGGTTAAGATGGTTCAATCAACTGGATCCAAGAATTAACAGAAGGCCATTCACAGATGAAGAAGAAGAGAGACTTTTAACGGCGCATCGAATCCATGGCAACAAATGGGCATTAATCGCAAGGCTTTTCCCCGGAAGAACCGATAACGCCGTCAAAAATCATTGGCATGTAATAATGGCCAGAAAACAAAGACAACAATCCAACCTCGGAGGAAACAAGAGATCATACAAACATTTTTTCTCCAATTCTAAAATCTCTCCGGTGCCAACGACAATGAGTAAAGCAAGATCGTACATCCGCGACTGCAATGACGACCAATTATTAGGTAGATTTTGTGAGCTTCGATACCGTCATAACAGTCATTGGAATTGTTTACCAGCTACGGACTTGTTCTTCCGATGCTATCCGAATTCGATCAGAATCGAAAGCGATTTGAGGAGTTTTAGAGACAATCGATCGAAATCGATGATTAATTTTGAGGTTGTGAATGAATTAAATAAGAAGAAGGATGTTAAGTTCATAGATTTTCTTGGGGTTGAACAGTGA MDDLAASVSASGDDAKSCPRGHWRPAEDEKLQKLVQQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTDEEEERLLTAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNLGGNKRSYKHFFSNSKISPVPTTMSKARSYIRDCNDDQLLGRFCELRYRHNSHWNCLPATDLFFRCYPNSIRIESDLRSFRDNRSKSMINFEVVNELNKKKDVKFIDFLGVEQ Homology
BLAST of Sed0004621 vs. NCBI nr
Match: XP_022936691.1 (transcription factor MYB117-like [Cucurbita moschata]) HSP 1 Score: 311.6 bits (797), Expect = 5.8e-81 Identity = 163/242 (67.36%), Postives = 185/242 (76.45%), Query Frame = 0
BLAST of Sed0004621 vs. NCBI nr
Match: XP_023535350.1 (transcription factor MYB105-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.1 bits (793), Expect = 1.7e-80 Identity = 162/242 (66.94%), Postives = 183/242 (75.62%), Query Frame = 0
BLAST of Sed0004621 vs. NCBI nr
Match: KAG6592163.1 (Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 306.6 bits (784), Expect = 1.9e-79 Identity = 161/242 (66.53%), Postives = 183/242 (75.62%), Query Frame = 0
BLAST of Sed0004621 vs. NCBI nr
Match: XP_022975017.1 (transcription factor CSA-like [Cucurbita maxima]) HSP 1 Score: 301.6 bits (771), Expect = 6.0e-78 Identity = 161/246 (65.45%), Postives = 183/246 (74.39%), Query Frame = 0
BLAST of Sed0004621 vs. NCBI nr
Match: KAE8651846.1 (hypothetical protein Csa_006140 [Cucumis sativus]) HSP 1 Score: 285.0 bits (728), Expect = 5.8e-73 Identity = 157/238 (65.97%), Postives = 177/238 (74.37%), Query Frame = 0
BLAST of Sed0004621 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2) HSP 1 Score: 206.5 bits (524), Expect = 3.5e-52 Identity = 98/136 (72.06%), Postives = 108/136 (79.41%), Query Frame = 0
BLAST of Sed0004621 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.3e-51 Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Sed0004621 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.2e-51 Identity = 88/110 (80.00%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of Sed0004621 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 2.5e-50 Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 0
BLAST of Sed0004621 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 4.2e-50 Identity = 98/151 (64.90%), Postives = 112/151 (74.17%), Query Frame = 0
BLAST of Sed0004621 vs. ExPASy TrEMBL
Match: A0A6J1F870 (transcription factor MYB117-like OS=Cucurbita moschata OX=3662 GN=LOC111443207 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 2.8e-81 Identity = 163/242 (67.36%), Postives = 185/242 (76.45%), Query Frame = 0
BLAST of Sed0004621 vs. ExPASy TrEMBL
Match: A0A6J1IBV4 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111473941 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 2.9e-78 Identity = 161/246 (65.45%), Postives = 183/246 (74.39%), Query Frame = 0
BLAST of Sed0004621 vs. ExPASy TrEMBL
Match: A0A061FIQ0 (Myb domain protein 52 OS=Theobroma cacao OX=3641 GN=TCM_035359 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 3.8e-62 Identity = 120/148 (81.08%), Postives = 131/148 (88.51%), Query Frame = 0
BLAST of Sed0004621 vs. ExPASy TrEMBL
Match: A0A6J1ADX5 (trichome differentiation protein GL1-like OS=Herrania umbratica OX=108875 GN=LOC110417027 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 6.5e-62 Identity = 120/148 (81.08%), Postives = 131/148 (88.51%), Query Frame = 0
BLAST of Sed0004621 vs. ExPASy TrEMBL
Match: A0A6P6AN70 (trichome differentiation protein GL1-like OS=Durio zibethinus OX=66656 GN=LOC111311208 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 8.5e-62 Identity = 122/152 (80.26%), Postives = 133/152 (87.50%), Query Frame = 0
BLAST of Sed0004621 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 ) HSP 1 Score: 204.5 bits (519), Expect = 9.3e-53 Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Sed0004621 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 ) HSP 1 Score: 203.8 bits (517), Expect = 1.6e-52 Identity = 88/110 (80.00%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of Sed0004621 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 ) HSP 1 Score: 200.3 bits (508), Expect = 1.8e-51 Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 0
BLAST of Sed0004621 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 ) HSP 1 Score: 199.5 bits (506), Expect = 3.0e-51 Identity = 98/151 (64.90%), Postives = 112/151 (74.17%), Query Frame = 0
BLAST of Sed0004621 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 ) HSP 1 Score: 199.5 bits (506), Expect = 3.0e-51 Identity = 98/151 (64.90%), Postives = 112/151 (74.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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