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Sed0004601 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCATTATTCAGTCACGGACGTCTCTATTATTTTCCACTCTTTTCTTACTAAAGTCTCTATAAATAAATATTAAAAAAAAAAAAAACCTCCAAAATGAATCTCAACTAATAAGGAACAAAATTAAGAGAGATAAAAAAGAAATGAATAGAGCTATGAAGTGTGTGGCTTTGGCAATGGTGTTGATGGTTGTGATTGGTTTGAGTGAAGCTCAAACCTTATGCAACATGTCACCTGCTGGTTTGATGGCATGTAAGCCCTCGGTGACGCCTCCGAACCCCCCGCCGCCGAGCGCCATTTGTTGCACGGCGCTCTCGCACGCCGACTTGCATTGTTTCTGCACCTACCGAAATTCGGGTGCACTTTCTTCTTTAGGCATTGACCCTGATCTTGCCATGAAGCTGCCTGGGAAATGCAGGCTTCCAAACTCTCCAAATTGCTAGAAAGCTCAAGTAATGTTGTTTAAGTGTGTTTTGATGTTATTTATGTATAATGGTCAGTTTAGTAGGAATTTAGAGTGAATTAGCTCAACTTTGAATATGGTGTAAAAGGGTGTCTTTTTTTTCTTTTGAAGTTGTAACCATATTCACTTGGTGTTGTTTTGAAGTTATATTTAATGATGTTTGAGTAAGATGTTGGGTTCTTTAGTATGTTGTGGTAAGAATTTAGTTTTTGTTGCTCAAAACTTTGATTAATAATGAATTTATGTTACATTAA GTCATTATTCAGTCACGGACGTCTCTATTATTTTCCACTCTTTTCTTACTAAAGTCTCTATAAATAAATATTAAAAAAAAAAAAAACCTCCAAAATGAATCTCAACTAATAAGGAACAAAATTAAGAGAGATAAAAAAGAAATGAATAGAGCTATGAAGTGTGTGGCTTTGGCAATGGTGTTGATGGTTGTGATTGGTTTGAGTGAAGCTCAAACCTTATGCAACATGTCACCTGCTGGTTTGATGGCATGTAAGCCCTCGGTGACGCCTCCGAACCCCCCGCCGCCGAGCGCCATTTGTTGCACGGCGCTCTCGCACGCCGACTTGCATTGTTTCTGCACCTACCGAAATTCGGGTGCACTTTCTTCTTTAGGCATTGACCCTGATCTTGCCATGAAGCTGCCTGGGAAATGCAGGCTTCCAAACTCTCCAAATTGCTAGAAAGCTCAAGTAATGTTGTTTAAGTGTGTTTTGATGTTATTTATGTATAATGGTCAGTTTAGTAGGAATTTAGAGTGAATTAGCTCAACTTTGAATATGGTGTAAAAGGGTGTCTTTTTTTTCTTTTGAAGTTGTAACCATATTCACTTGGTGTTGTTTTGAAGTTATATTTAATGATGTTTGAGTAAGATGTTGGGTTCTTTAGTATGTTGTGGTAAGAATTTAGTTTTTGTTGCTCAAAACTTTGATTAATAATGAATTTATGTTACATTAA ATGAATAGAGCTATGAAGTGTGTGGCTTTGGCAATGGTGTTGATGGTTGTGATTGGTTTGAGTGAAGCTCAAACCTTATGCAACATGTCACCTGCTGGTTTGATGGCATGTAAGCCCTCGGTGACGCCTCCGAACCCCCCGCCGCCGAGCGCCATTTGTTGCACGGCGCTCTCGCACGCCGACTTGCATTGTTTCTGCACCTACCGAAATTCGGGTGCACTTTCTTCTTTAGGCATTGACCCTGATCTTGCCATGAAGCTGCCTGGGAAATGCAGGCTTCCAAACTCTCCAAATTGCTAG MNRAMKCVALAMVLMVVIGLSEAQTLCNMSPAGLMACKPSVTPPNPPPPSAICCTALSHADLHCFCTYRNSGALSSLGIDPDLAMKLPGKCRLPNSPNC Homology
BLAST of Sed0004601 vs. NCBI nr
Match: XP_038898435.1 (putative lipid-transfer protein DIR1 [Benincasa hispida]) HSP 1 Score: 160.6 bits (405), Expect = 6.9e-36 Identity = 77/99 (77.78%), Postives = 88/99 (88.89%), Query Frame = 0
BLAST of Sed0004601 vs. NCBI nr
Match: XP_022138173.1 (putative lipid-transfer protein DIR1 [Momordica charantia]) HSP 1 Score: 159.1 bits (401), Expect = 2.0e-35 Identity = 76/99 (76.77%), Postives = 85/99 (85.86%), Query Frame = 0
BLAST of Sed0004601 vs. NCBI nr
Match: XP_022979997.1 (putative lipid-transfer protein DIR1 [Cucurbita maxima]) HSP 1 Score: 157.1 bits (396), Expect = 7.6e-35 Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of Sed0004601 vs. NCBI nr
Match: XP_022955375.1 (putative lipid-transfer protein DIR1 [Cucurbita moschata] >XP_023526472.1 putative lipid-transfer protein DIR1 [Cucurbita pepo subsp. pepo] >KAG6582085.1 putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155.2 bits (391), Expect = 2.9e-34 Identity = 73/99 (73.74%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of Sed0004601 vs. NCBI nr
Match: NP_001295798.1 (lipopolysaccharide-binding protein precursor [Cucumis sativus] >CEG62452.1 Lipid binding/ Lipid transporter protein [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30 Identity = 69/101 (68.32%), Postives = 84/101 (83.17%), Query Frame = 0
BLAST of Sed0004601 vs. ExPASy Swiss-Prot
Match: Q8W453 (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.5e-17 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Sed0004601 vs. ExPASy TrEMBL
Match: A0A6J1CC99 (putative lipid-transfer protein DIR1 OS=Momordica charantia OX=3673 GN=LOC111009409 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 9.7e-36 Identity = 76/99 (76.77%), Postives = 85/99 (85.86%), Query Frame = 0
BLAST of Sed0004601 vs. ExPASy TrEMBL
Match: A0A6J1IQ87 (putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111479523 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.7e-35 Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of Sed0004601 vs. ExPASy TrEMBL
Match: A0A6J1GUZ3 (putative lipid-transfer protein DIR1 OS=Cucurbita moschata OX=3662 GN=LOC111457423 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34 Identity = 73/99 (73.74%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of Sed0004601 vs. ExPASy TrEMBL
Match: A0A0A0KZ41 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G017140 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.9e-31 Identity = 70/101 (69.31%), Postives = 84/101 (83.17%), Query Frame = 0
BLAST of Sed0004601 vs. ExPASy TrEMBL
Match: A0A0A1IXE5 (Lipid binding/ Lipid transporter protein OS=Cucumis sativus OX=3659 GN=LBP PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 5.5e-31 Identity = 69/101 (68.32%), Postives = 84/101 (83.17%), Query Frame = 0
BLAST of Sed0004601 vs. TAIR 10
Match: AT5G48485.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-18 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Sed0004601 vs. TAIR 10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 85.5 bits (210), Expect = 2.6e-17 Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of Sed0004601 vs. TAIR 10
Match: AT3G07450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 47.4 bits (111), Expect = 7.9e-06 Identity = 22/58 (37.93%), Postives = 32/58 (55.17%), Query Frame = 0
BLAST of Sed0004601 vs. TAIR 10
Match: AT3G52130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 47.4 bits (111), Expect = 7.9e-06 Identity = 26/66 (39.39%), Postives = 37/66 (56.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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