Sed0004572 (gene) Chayote v1

Overview


Name	Sed0004572
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pectin lyase-like superfamily protein
Location	LG06: 3241835 .. 3245693 (+)
RNA-Seq Expression	Sed0004572
Synteny	Sed0004572

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTTCAAGGAACCACACACCTTCTTATTTCCTTTCTCCTTCAAACTTTAGACCTCGCCTTGGCTGCCGGACCGAGATTCGACATCGTTAGTCTCGGAGCCAAGCCCGATGGTATGACAGACGCCTCACCTGCATTGCAAGCCGCATGGGGTAATGCATGCGGCTCGACCGAGCCGGCCACCATTAACGTGCCCAATGGCATATTCTACGTTCAAAAAGGAGAGTTTAGAGGTCCTTGTAAGAACAATGATATCACTGTGCTCATTGATGGCACATTGGTGGCTTCTTCAGATATTCAGATTTTAGCTCACACTGATTCTTGGATTTGGTTTACAAATCTAAATGGGCTTTCCATTTCTGGTGGTGTTCTTGATGGCCAAGGAATTGGCTTATGGAATTGCAAAAAATCAGGCAACACTTGCCCCGTTGGAGCCACGGTATATTTATCATAGTCACCTATATAGAAATTAATTTTTTATGGAGAATCCAAATGTTGCAGGATCAACAGTTAATATGTCTCGTTAGAATAGTTAAGGTCTTGTCACCTAGTTTGGATACTTATAGATATCAAAAATAAAGTTGGAGCCACGATAGGTGTATTCAAACAACCCAAAAAATCCGGACAATCCAACCCAATTTGATAGGTTTATGCACTTTGTAAAGTTGGGTTGAGATCAAATAAATAAAATTATCATGGATTCGAGTTACCTTATGAGTTGACCTAAAATTAATTTAGGTAGACTCTAGCTGACCCGAATTCATTATTAATACTAAAACAATATTTTTTTTTTACATAAAACATAATTATATATGCATATACTTATTTTATTATGTACTAAAATTATGTTAATTTTATTCAATTTCATTAGTTTTTTTAGTCTTTTTAATCTCTAAAATTCTTCAAAAATATGTTTTTAAGTCATTAGGATGTATCTTTTTTAACATAAATTTAAATTAGAAATGAGATATATTAAGAAATAGAAAGTGAATAATAAATGTATATCAGATTTAAAAAGAAAAAAAATAATCCGGTGATCCAACCCAATCCAACATAAAAAAATATATGGATTAAATTAAGTTGGGTTGCTTTAATATATAACATTAGATGGATAAGTGGATTCATCCATCCAAATTTAGGATTGGTCCAAAAAAACACCTTACCAAACCAAACTCTAAACCAACCTATTCTAGGTACATCCTTAAGCTTTTAAGCTTGTATCTATTTGGCTCCAATATTGAACTTAGATTTTTTTTTTTTTTAATTTTGAATAAATTTTAAATTTTAAATTTGTGTTTAATATATTCATATATATTAAACAGTATTATCTATTAGGGGCTTTTGTATGTATATTATACAAAAGGGTTTAAATATTCCATAAATAGCACAATAATGAAAATATTTACACATATAGCAAAAAAATGTAAATTGATAGACTTTCATATCGATAAATTCTATTAATAGATGTTGATAGAATCAATTACTAATAAATAAATAAATAAATTGATAGACTTCCATTAAATTTTATCAATAAGGGCCGATAGAATCAATTACTGATAAAATTGATAGACTTTCATCACTAGAGAACGATAGATTCTATCAAAGTATTCGATAATAGAGATTTTTTAAAAGAATAAGTAGAATTTACTATAAATGAATTATTTTTAAAAAGTTGTTATAATTTTAAATTGGGGTAAAAAAAATTGCTATACAACTATAAATTCCCTAACAATTAATTATTATTAACTTTGTGTTGGAAAGGTTTGTAACTTTTTTTAAATGGCCAACAATGTCACCGACCGGATGAGACGTGACATTGAGAAACTAAGGAATTATTGGAAAAAATATATTAAAAGTTTAAGAATTGCTTATTATACACTTGTGAAAGTTTATAGAACAATAAATTAACTCAAACGTGATAGTTGAGAGACTACTCATGCAATTTATCCTATATACATAGTAGCTATTGAAGTTTTGAAAGCAACTTGATTTTCAAGTTACCGAATGGGTTAGTCGTGCAATGGTTTTATTGTTCGGTTGTAAACTAGTTCAACATCAGTCTTAATAGGTTTGAGCCCGAGAATCGGTATTTGTCCTCCGTCCTCTAATATGTACTCAAAATAAAAACTTAATTTTCAAGTTGAAAGAGAATTAAGAAACCATCTTAACTATTTAACTTGATATTGATTCTTCCTATGAATTATTTTGAATTTGTAGAATCTACGAGTCTCACACTCACAAAATGTAAATATCCAAGGATTAACTTCGATCAATAGCCAAATGTTCAACATTGTGTTGTATGGTAACCAAAACGTGAACCTACAAGGAGTCAATGTATCTTCTCCCGGCGACAGTCCGAACACCGATGGCATACACGTACAAGAAGCATCCGACGTAACCATCCTCAACACCAACATTGGCACCGGCGACGACTGCGTCTCAATCGGGCCAGGAACCACCAACTTGTGGATGGAAACTATTGCATGCGGACCTGGCCATGGAGTCAGGTAAAAATATACGACAGAACCGTTACAATTTAGTCTCTATACTTATAGTGTTTTTTAAATAATTTGACCTCTATATATTGGAATGTAACAATTTAGTCCTCGTACTTCAAAATTCGCGATTTGATCGCATGACGAAAAACTTTTGTCAAATGTGTTGTTGTTGTAGCATTGGGAGCTTGGGGAGGGGGCAGCAAGGGAATGGAGTGAAGAACATGACGTTGAAAACGGCTACATTCACAGGGACTCAAAATGGAGTGAGGATTAAATCATGGGCAAAGCCAAGCAATGAGTTTGCTAGCGATGTTCATTTTCAACACATTGTTATGAACAATGTGAACAATCCTATCGTTATTGATCAAAATTATTGTCCACATAACATAGGCTGCTCTGACAAGGTACATTTCCTCATTAATGAAATAGAGTTTCAATTTTTTTTTCTTTTTTGAAATCGAAAAATCGGAGCTTTGCTCCCCTATACCGACCTGGGTACCACTGGCCCGTCCCTAAACTGTGGGACTGGGATAGTTTGAAAGGTATTCTAATTTAAGCGCTATGCCTTTAAGTCCTTAGCGTCAACCGCTGGGCTGTCCCTTGGAGACCAAATAGAGTTTCAATTTAACCCAACATATTTGAGGTTTAAAAAATTTGAATTTGTAATATTTTTATGAAAGATACATGTTAATATTTGACAAAGTTCATTAAGACTTTATTTTTATTTTTTGAAAAATTGATACTTCATTAGTAATCGACACATACAATTAAAAATGAGAGAGAAGAAAAGTTCTCCAATTTAAAGAAATAAATAGCATCAACAATGGTGCCCATATGGAAGTTTATTTTTTTTTACACAACCGAAAGTTAGATAATCATGTGTCAATAAAGAAATTGTGAGTTAAGGGATTAATTGAACAAAAATCACACCCTTACGCATAAATCATGAGTTTTCACGTATTTAATTCGCCAAACCATTACAAACGACAAGAATTATATTTTAAGTTTTATCGAAATACAAGGACTAAATTTCTTTTAAAATTATAGGAACTAAACTCTAACTTCTTTTTAAATTATAAGGACTAAATATATAATCTACGAATGTTCATAACCTTTTCATTCGGTGTGAAATAGGGTTCTGGGGTCAAAGTCAACGACATTACGTACCAAGACATCCATGGAACATCGGCCTCGAAAGTCGCAATAAACTTCGATTGCAGCCCGACAAATCCTTGCACTGGAATAACGTTGGAAGACATAAATCTAACATACGAGGATCAAAACTCTCAAGCTTCATGTAGAAATGCTGAAGGGACGACATCGGGTGTTGTTCAGCCTCCTAGTTGCTTAACACCATAA

mRNA sequence

ATGGCTCTTCAAGGAACCACACACCTTCTTATTTCCTTTCTCCTTCAAACTTTAGACCTCGCCTTGGCTGCCGGACCGAGATTCGACATCGTTAGTCTCGGAGCCAAGCCCGATGGTATGACAGACGCCTCACCTGCATTGCAAGCCGCATGGGGTAATGCATGCGGCTCGACCGAGCCGGCCACCATTAACGTGCCCAATGGCATATTCTACGTTCAAAAAGGAGAGTTTAGAGGTCCTTGTAAGAACAATGATATCACTGTGCTCATTGATGGCACATTGGTGGCTTCTTCAGATATTCAGATTTTAGCTCACACTGATTCTTGGATTTGGTTTACAAATCTAAATGGGCTTTCCATTTCTGGTGGTGTTCTTGATGGCCAAGGAATTGGCTTATGGAATTGCAAAAAATCAGGCAACACTTGCCCCGTTGGAGCCACGAATCTACGAGTCTCACACTCACAAAATGTAAATATCCAAGGATTAACTTCGATCAATAGCCAAATGTTCAACATTGTGTTGTATGGTAACCAAAACGTGAACCTACAAGGAGTCAATGTATCTTCTCCCGGCGACAGTCCGAACACCGATGGCATACACGTACAAGAAGCATCCGACGTAACCATCCTCAACACCAACATTGGCACCGGCGACGACTGCGTCTCAATCGGGCCAGGAACCACCAACTTGTGGATGGAAACTATTGCATGCGGACCTGGCCATGGAGTCAGCATTGGGAGCTTGGGGAGGGGGCAGCAAGGGAATGGAGTGAAGAACATGACGTTGAAAACGGCTACATTCACAGGGACTCAAAATGGAGTGAGGATTAAATCATGGGCAAAGCCAAGCAATGAGTTTGCTAGCGATGTTCATTTTCAACACATTGTTATGAACAATGTGAACAATCCTATCGTTATTGATCAAAATTATTGTCCACATAACATAGGCTGCTCTGACAAGGGTTCTGGGGTCAAAGTCAACGACATTACGTACCAAGACATCCATGGAACATCGGCCTCGAAAGTCGCAATAAACTTCGATTGCAGCCCGACAAATCCTTGCACTGGAATAACGTTGGAAGACATAAATCTAACATACGAGGATCAAAACTCTCAAGCTTCATGTAGAAATGCTGAAGGGACGACATCGGGTGTTGTTCAGCCTCCTAGTTGCTTAACACCATAA

Coding sequence (CDS)

ATGGCTCTTCAAGGAACCACACACCTTCTTATTTCCTTTCTCCTTCAAACTTTAGACCTCGCCTTGGCTGCCGGACCGAGATTCGACATCGTTAGTCTCGGAGCCAAGCCCGATGGTATGACAGACGCCTCACCTGCATTGCAAGCCGCATGGGGTAATGCATGCGGCTCGACCGAGCCGGCCACCATTAACGTGCCCAATGGCATATTCTACGTTCAAAAAGGAGAGTTTAGAGGTCCTTGTAAGAACAATGATATCACTGTGCTCATTGATGGCACATTGGTGGCTTCTTCAGATATTCAGATTTTAGCTCACACTGATTCTTGGATTTGGTTTACAAATCTAAATGGGCTTTCCATTTCTGGTGGTGTTCTTGATGGCCAAGGAATTGGCTTATGGAATTGCAAAAAATCAGGCAACACTTGCCCCGTTGGAGCCACGAATCTACGAGTCTCACACTCACAAAATGTAAATATCCAAGGATTAACTTCGATCAATAGCCAAATGTTCAACATTGTGTTGTATGGTAACCAAAACGTGAACCTACAAGGAGTCAATGTATCTTCTCCCGGCGACAGTCCGAACACCGATGGCATACACGTACAAGAAGCATCCGACGTAACCATCCTCAACACCAACATTGGCACCGGCGACGACTGCGTCTCAATCGGGCCAGGAACCACCAACTTGTGGATGGAAACTATTGCATGCGGACCTGGCCATGGAGTCAGCATTGGGAGCTTGGGGAGGGGGCAGCAAGGGAATGGAGTGAAGAACATGACGTTGAAAACGGCTACATTCACAGGGACTCAAAATGGAGTGAGGATTAAATCATGGGCAAAGCCAAGCAATGAGTTTGCTAGCGATGTTCATTTTCAACACATTGTTATGAACAATGTGAACAATCCTATCGTTATTGATCAAAATTATTGTCCACATAACATAGGCTGCTCTGACAAGGGTTCTGGGGTCAAAGTCAACGACATTACGTACCAAGACATCCATGGAACATCGGCCTCGAAAGTCGCAATAAACTTCGATTGCAGCCCGACAAATCCTTGCACTGGAATAACGTTGGAAGACATAAATCTAACATACGAGGATCAAAACTCTCAAGCTTCATGTAGAAATGCTGAAGGGACGACATCGGGTGTTGTTCAGCCTCCTAGTTGCTTAACACCATAA

Protein sequence

MALQGTTHLLISFLLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTEPATINVPNGIFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSISGGVLDGQGIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNVNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGPGHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNNVNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITLEDINLTYEDQNSQASCRNAEGTTSGVVQPPSCLTP

Homology

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BLAST of Sed0004572 vs. NCBI nr
Match: XP_004140371.1 (polygalacturonase [Cucumis sativus])

HSP 1 Score: 561.2 bits (1445), Expect = 7.0e-156
Identity = 270/383 (70.50%), Postives = 319/383 (83.29%), Query Frame = 0


Query: 10  LISFLLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTEPATINVPNGI 69
           L+S L   L+  LAAG  F+IVSLGA  DG TDAS A Q AW NACGS+EPATI VPNG 
Sbjct: 9   LLSLLFLFLNHGLAAGSTFNIVSLGAIADGKTDASHAFQEAWANACGSSEPATIYVPNGA 68

Query: 70  FYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSISGGVLDGQG 129
           FY+Q G F GPCKNN IT++I+GTL+ASS+IQ+LA + +WI F  +NGLSI GGV+DGQG
Sbjct: 69  FYIQSGNFSGPCKNNAITIVINGTLIASSNIQVLAQSQAWIAFRQINGLSIYGGVIDGQG 128

Query: 130 IGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNVNLQGVNVSS 189
           IGLWNCK SG +CP GATNL +SH+QNVN+ GL+SINSQMFNIV+YG +NV +QGVNVSS
Sbjct: 129 IGLWNCKHSGKSCPDGATNLEISHAQNVNVNGLSSINSQMFNIVVYGCENVQIQGVNVSS 188

Query: 190 PGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGPGHGVSIGSLG 249
            GDSPNTDGIHVQ++ +V I +T+IGTGDDC+SIGPGTTNLWME I CGPGHG+SIGSLG
Sbjct: 189 AGDSPNTDGIHVQQSLNVNISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGSLG 248

Query: 250 RGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNNVNNPIVIDQN 309
           R  +  GV+N+T+ TATFTGTQNGVRIKSW +PSN FA+ + FQHI   NVNNPI+IDQN
Sbjct: 249 RQVEEAGVENVTVTTATFTGTQNGVRIKSWGRPSNAFANKILFQHIRFYNVNNPILIDQN 308

Query: 310 YCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITLEDINLTYEDQ 369
           YCP+N GC  + SGVKV+D+TYQD++GTSAS+VAINFDCSPTNPCTGITLEDI LTY +Q
Sbjct: 309 YCPNNQGCPGQASGVKVSDVTYQDVNGTSASEVAINFDCSPTNPCTGITLEDIQLTYNNQ 368

Query: 370 NSQASCRNAEGTTSGVVQPPSCL 393
             +ASC+NA GT SG +QP SCL
Sbjct: 369 IPKASCKNARGTASGPLQPRSCL 391

[Close]

BLAST of Sed0004572 vs. NCBI nr
Match: XP_022932930.1 (polygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 558.5 bits (1438), Expect = 4.5e-155
Identity = 266/393 (67.68%), Postives = 325/393 (82.70%), Query Frame = 0


Query: 1   MALQGTTHLLISF-LLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTE 60
           MAL GT  L++SF LL  L+  LA G  FDIVSLGAKPDG TDAS  LQ AW  AC ST 
Sbjct: 1   MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTG 60

Query: 61  PATINVPNGIFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLS 120
           PATI+VP G FYVQ G F GPCKNN IT+ IDGTLVASS+IQ+LA T +WI F ++NGLS
Sbjct: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLS 120

Query: 121 ISGGVLDGQGIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQN 180
           I GGV+DG+G G+WNCK SGN CP GA NL + ++QNV I GL SINSQ+FNIV++G +N
Sbjct: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRN 180

Query: 181 VNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGP 240
           VN+QGV VS PGDSPNTDGIHVQE+SDVTIL++NIGTGDDC+SIGPGTTNLW+E++ CGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNN 300
           GHG+SIGSLGR     GVKN+T+ ++TFTG+ NGVRIKSWA+PSN FA+D+HFQHI ++N
Sbjct: 241 GHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDN 300

Query: 301 VNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITL 360
           V NPI+IDQNYCPH+ GC  + SGVK++++TY+DI GTSA+++ + FDC+PTNPCTG+TL
Sbjct: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTL 360

Query: 361 EDINLTYEDQNSQASCRNAEGTTSGVVQPPSCL 393
           EDI +TY DQ ++ASC +A+GT SGVV+P SCL
Sbjct: 361 EDIKVTYNDQIAKASCESAKGTASGVVEPASCL 393

[Close]

BLAST of Sed0004572 vs. NCBI nr
Match: XP_022932928.1 (polygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 557.8 bits (1436), Expect = 7.7e-155
Identity = 266/393 (67.68%), Postives = 324/393 (82.44%), Query Frame = 0


Query: 1   MALQGTTHLLISF-LLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTE 60
           MAL GT  LL+S  LL  L  ALA G   DIVSLGAKPDG TDASP LQ AW  AC ST 
Sbjct: 1   MALYGTLMLLLSLPLLLLLTYALADGLTLDIVSLGAKPDGKTDASPVLQTAWAKACDSTG 60

Query: 61  PATINVPNGIFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLS 120
           PATI+VP G FYVQ G F GPCKNN IT+ IDGTLVASSDIQ+LA T +WI F ++NGLS
Sbjct: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLS 120

Query: 121 ISGGVLDGQGIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQN 180
           I GGV+DG+G G+W+CK SGN CP GA NL ++++QNV I GL SINSQ+FNIV++G QN
Sbjct: 121 IHGGVIDGKGSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQN 180

Query: 181 VNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGP 240
           VN+QGV VS PGDSPNTDGIHVQE+SDVTIL++NIGTGDDC+SIGPGTTNLW+E++ CGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNN 300
           GHG+SIGSLG+     GVKN+T+ ++TFT + NGVRIKSWA+PS+ FA+D+HFQHI ++N
Sbjct: 241 GHGISIGSLGKSADEPGVKNVTVTSSTFTESTNGVRIKSWARPSSGFATDIHFQHITLDN 300

Query: 301 VNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITL 360
           V NPI+IDQNYCPH+ GC  + SGVK++++TY+DI GTSA+++ + FDCSPTNPCTG+TL
Sbjct: 301 VKNPIIIDQNYCPHDEGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCSPTNPCTGLTL 360

Query: 361 EDINLTYEDQNSQASCRNAEGTTSGVVQPPSCL 393
           EDI +TY DQ ++ASC+ A+GT SGVV+P SCL
Sbjct: 361 EDIKVTYNDQIAKASCKGAKGTASGVVEPASCL 393

[Close]

BLAST of Sed0004572 vs. NCBI nr
Match: XP_022973591.1 (polygalacturonase-like [Cucurbita maxima])

HSP 1 Score: 555.8 bits (1431), Expect = 2.9e-154
Identity = 266/393 (67.68%), Postives = 323/393 (82.19%), Query Frame = 0


Query: 1   MALQGTTHLLISF-LLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTE 60
           MA+  T  LLI   LL  L+ ALA G   DIVSLGAKPDG TDASP LQ AW  AC ST 
Sbjct: 1   MAIYETLMLLIFLPLLLFLNHALADGLTLDIVSLGAKPDGKTDASPVLQTAWAKACDSTG 60

Query: 61  PATINVPNGIFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLS 120
           PA+I+VP G FYVQ G F GPCKNN IT+ IDGTLVASSDIQ+LA T +WI F ++NGLS
Sbjct: 61  PASIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIEFKDVNGLS 120

Query: 121 ISGGVLDGQGIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQN 180
           I GGV+DG+G G+WNCK SGN CP GA NL ++++QNV I GL SINSQMFNIV++G QN
Sbjct: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEITNAQNVIINGLASINSQMFNIVVHGCQN 180

Query: 181 VNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGP 240
           VN+QGV VS PGDSPNTDGIHVQE+SDVTIL++NIGTGDDC+SIGPGTTNLW+E++ CGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNN 300
           GHG+SIGSLG+     GVKN+T+ ++TF+ T NGVRIKSW +PS+ FA+D+HFQHI ++N
Sbjct: 241 GHGISIGSLGKSANEPGVKNVTVTSSTFSETTNGVRIKSWGRPSSGFATDIHFQHITLDN 300

Query: 301 VNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITL 360
           V NPI+IDQNYCPH+ GC  + SGVK++D+TY+DI GTSA+K+ + FDCSPTNPCTG+TL
Sbjct: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISDVTYEDIKGTSATKIGVKFDCSPTNPCTGLTL 360

Query: 361 EDINLTYEDQNSQASCRNAEGTTSGVVQPPSCL 393
           EDI +TY+DQ ++ASC+ A+GT SGVV+P SCL
Sbjct: 361 EDIKVTYDDQIAKASCKGAKGTASGVVEPASCL 393

[Close]

BLAST of Sed0004572 vs. NCBI nr
Match: XP_022973588.1 (polygalacturonase-like [Cucurbita maxima])

HSP 1 Score: 555.1 bits (1429), Expect = 5.0e-154
Identity = 265/393 (67.43%), Postives = 323/393 (82.19%), Query Frame = 0


Query: 1   MALQGTTHLLISF-LLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTE 60
           MA+  T  LLI   LL  L+ ALA G   DIVSLGAKPDG TDASP LQ AW  AC ST 
Sbjct: 1   MAIYETLMLLIFLPLLLLLNHALADGLTLDIVSLGAKPDGKTDASPVLQTAWAKACDSTG 60

Query: 61  PATINVPNGIFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLS 120
           PA+I+VP G FYVQ G F GPCKNN IT+ IDGTLVASSDIQ+LA T +WI F ++NGLS
Sbjct: 61  PASIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIEFKDVNGLS 120

Query: 121 ISGGVLDGQGIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQN 180
           I GGV+DG+G G+WNCK SGN CP GA NL ++++QNV I GL SINSQMFNIV++G QN
Sbjct: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEITNAQNVIINGLASINSQMFNIVVHGCQN 180

Query: 181 VNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGP 240
           VN+QGV VS PGDSPNTDGIHVQE+SDVTIL++NIGTGDDC+SIGPGTTNLW+E++ CGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNN 300
           GHG+SIGSLG+     GVKN+T+ ++TF+ T NGVRIKSW +PS+ FA+D+HFQHI ++N
Sbjct: 241 GHGISIGSLGKSANEPGVKNVTVTSSTFSETTNGVRIKSWGRPSSGFATDIHFQHITLDN 300

Query: 301 VNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITL 360
           V NPI+IDQNYCPH+ GC  + SGVK++D+TY+DI GTSA+K+ + FDCSPTNPCTG+TL
Sbjct: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISDVTYEDIKGTSATKIGVKFDCSPTNPCTGLTL 360

Query: 361 EDINLTYEDQNSQASCRNAEGTTSGVVQPPSCL 393
           EDI +TY+DQ ++ASC+ A+GT SG+V+P SCL
Sbjct: 361 EDIKVTYDDQIAKASCKGAKGTASGMVEPASCL 393

[Close]

BLAST of Sed0004572 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 8.3e-128
Identity = 219/376 (58.24%), Postives = 286/376 (76.06%), Query Frame = 0


Query: 18  LDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTEPATINVPNGIFYVQKGEF 77
           ++ A+A+   +++ SLGAK DG TD++ A  +AW  AC S  P  I VP G F+++   F
Sbjct: 18  INSAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVF 77

Query: 78  RGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSISGGVLDGQGIGLWNCKK 137
            GPCKNN IT  I GTLVA SD +++ +  +WI+F ++NG++ISGG+LDGQG  LW CK 
Sbjct: 78  SGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKA 137

Query: 138 -SGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNVNLQGVNVSSPGDSPNT 197
             G +CP GAT L  S S N+ + GL S+NSQMF+IV+   QNV +QGV VS  G+SPNT
Sbjct: 138 CHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNT 197

Query: 198 DGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGPGHGVSIGSLGRGQQGNG 257
           DGIHVQ +S VTILN+ I TGDDCVSIGPGT+NLW+E +ACGPGHG+SIGSLG+ Q+  G
Sbjct: 198 DGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAG 257

Query: 258 VKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNNVNNPIVIDQNYCPHNIG 317
           V+N+T+KT TF+GTQNG+RIKSW +PS  FA ++ FQH  M NV NPIVIDQ+YCP N G
Sbjct: 258 VQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKG 317

Query: 318 CSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITLEDINLTYEDQNSQASCR 377
           C  + SGV+++D+TY+DIHGTSA++VA+ FDCSP +PC  I LED+ LTY++Q +++SC 
Sbjct: 318 CPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYKNQAAESSCS 377

Query: 378 NAEGTTSGVVQPPSCL 393
           +A+GTT GVVQP SCL
Sbjct: 378 HADGTTEGVVQPTSCL 393

[Close]

BLAST of Sed0004572 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 4.4e-105
Identity = 197/395 (49.87%), Postives = 261/395 (66.08%), Query Frame = 0


Query: 6   TTHLLISFLLQTLDLALAAG------PRFDIVSLGAKPDGMTDASPALQAAWGNACGSTE 65
           T+ L++   L  LD  L +          +++S GAKPDG  D++ A  AAW  AC S  
Sbjct: 5   TSCLILPLALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACASAN 64

Query: 66  PATINVPNGIFYVQKGEFRG-PCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGL 125
           P TI VP G F V    F G  CK   I++ I G++VA  D +I+A +  WIWF ++  +
Sbjct: 65  PTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDV 124

Query: 126 SISGGVLDGQGIGLWNCKKS-GNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGN 185
           SI GG+LD QG  LW CK + G+ CP GA +L  S S N+ I GLTSINSQ F+IV+  +
Sbjct: 125 SIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNS 184

Query: 186 QNVNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIAC 245
            NVN+ GV VS+  +SPNTDGIHV+ +  V I N+ IGTGDDC+SIGPG+TN++++TI C
Sbjct: 185 NNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRC 244

Query: 246 GPGHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVM 305
           GPGHG+SIGSLGR ++  GV N+T+    F GT NGVRIK+W K SN FA ++ FQHI M
Sbjct: 245 GPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINM 304

Query: 306 NNVNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGI 365
             V NPI+IDQ+YC H   C  + SGVKV+++ Y+DIHGTS ++VA+  DCS   PCTGI
Sbjct: 305 KMVKNPIIIDQHYCLHK-PCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGI 364

Query: 366 TLEDINLTYEDQNSQASCRNAEGTTSGVVQPPSCL 393
            ++D+NL    + +QASC NA G+ + VV    CL
Sbjct: 365 VMDDVNLVSVHRPAQASCDNANGSANDVVPFTPCL 398

[Close]

BLAST of Sed0004572 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.6e-78
Identity = 156/380 (41.05%), Postives = 243/380 (63.95%), Query Frame = 0


Query: 21  ALAAGP--RFDIVSLGAKPDGMTDASPALQAAWGNACGSTEPATINVPNGIFYVQKGEFR 80
           A A+GP   FDI  LGA  +G TD++ A+Q AW +ACG T   TI +P G F V    F 
Sbjct: 32  AKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFT 91

Query: 81  GPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSISG-GVLDGQGIGLW---N 140
           GPCK  D+T+ ++G L+A++D+       +WI    ++ L I+G G LDGQG  +W   +
Sbjct: 92  GPCK-GDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNS 151

Query: 141 CKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNVNLQGVNVSSPGDSP 200
           C K  + C +   +L +    N  + G+T +NS+ F++ +Y  +++ ++ VNV++PGDSP
Sbjct: 152 CVKKYD-CKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSP 211

Query: 201 NTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGPGHGVSIGSLGRGQQG 260
           NTDGIH+ ++S VTI NT IG GDDC+SIGPGT+ + +  + CGPGHG+SIGSLGR +  
Sbjct: 212 NTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDE 271

Query: 261 NGVKNMTLKTATFTGTQNGVRIKSWAKPSNEF-ASDVHFQHIVMNNVNNPIVIDQNYCPH 320
             V ++ +K  T   T NGVRIK++   ++   AS +H+++I M +   PI+ID  YCP+
Sbjct: 272 KDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPN 331

Query: 321 NIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITLEDINLTYEDQNSQ- 380
            +  ++  S V V D+T+++I GTS++  A+N  C+   PCTG+T++D+N+ Y   N++ 
Sbjct: 332 KLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNKT 391

Query: 381 -ASCRNAEGTTSGVVQPPSC 392
            A C+NA+G+  G ++  +C
Sbjct: 392 MAVCKNAKGSAKGCLKELAC 409

[Close]

BLAST of Sed0004572 vs. ExPASy Swiss-Prot
Match: P35338 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 3.9e-77
Identity = 156/380 (41.05%), Postives = 240/380 (63.16%), Query Frame = 0


Query: 21  ALAAGP--RFDIVSLGAKPDGMTDASPALQAAWGNACGSTEPATINVPNGIFYVQKGEFR 80
           A A+GP   FDI  LGA  +G TD++ A+Q AW +ACG T   TI +P G F V +  F 
Sbjct: 32  AKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFT 91

Query: 81  GPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSISG-GVLDGQGIGLW---N 140
           GPCK  D+T+ +DG L+A++D+       +WI    ++ L I+G G LDGQG  +W   +
Sbjct: 92  GPCK-GDVTIQVDGNLLATTDLSQYKEHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNS 151

Query: 141 CKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNVNLQGVNVSSPGDSP 200
           C K  + C +   +L +    N  + G+T +NS+ F++ +Y  +N+ ++ V V++PGDSP
Sbjct: 152 CTKKYD-CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSP 211

Query: 201 NTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGPGHGVSIGSLGRGQQG 260
           NTDGIH+ ++S +TI NT IG GDDC+SIGPGT+ + +  + CGPGHG+SIGSLGR +  
Sbjct: 212 NTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDE 271

Query: 261 NGVKNMTLKTATFTGTQNGVRIKSWAKPSNEF-ASDVHFQHIVMNNVNNPIVIDQNYCPH 320
             V ++ +K  T   T  GVRIK++   ++    S +H+++I M +  NPI ID  YCP+
Sbjct: 272 KDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPN 331

Query: 321 NIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITLEDINLTYEDQNSQ- 380
            +  ++  S V V D+T+++I GTS++  AI+  C+   PCTG T++D+N+ Y   N++ 
Sbjct: 332 KLCTANGASKVTVKDVTFKNITGTSSTPEAISLLCTAKVPCTGATMDDVNVEYSGTNNKT 391

Query: 381 -ASCRNAEGTTSGVVQPPSC 392
            A C NA+G+T G ++  +C
Sbjct: 392 MAICTNAKGSTKGCLKELAC 409

[Close]

BLAST of Sed0004572 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 8.7e-77
Identity = 154/380 (40.53%), Postives = 241/380 (63.42%), Query Frame = 0


Query: 21  ALAAGP--RFDIVSLGAKPDGMTDASPALQAAWGNACGSTEPATINVPNGIFYVQKGEFR 80
           A A+GP   FDI  LGA  +G TD++ A+Q AW +ACG T   TI +P G F V +  F 
Sbjct: 32  AKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFT 91

Query: 81  GPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSISG-GVLDGQGIGLW---N 140
           GPCK  D+T+ +DG L+A++D+       +WI    ++ L I+G G LDGQG  +W   +
Sbjct: 92  GPCK-GDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNS 151

Query: 141 CKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNVNLQGVNVSSPGDSP 200
           C K  + C +   +L +    N  + G+T +NS+ F++ +Y  +++ ++ V V++PGDSP
Sbjct: 152 CTKKYD-CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSP 211

Query: 201 NTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGPGHGVSIGSLGRGQQG 260
           NTDGIH+ ++S +TI NT IG GDDC+SIGPGT+ + +  + CGPGHG+SIGSLGR +  
Sbjct: 212 NTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDE 271

Query: 261 NGVKNMTLKTATFTGTQNGVRIKSWAKPSNEF-ASDVHFQHIVMNNVNNPIVIDQNYCPH 320
             V ++ +K  T   T  GVRIK++   ++    S +H+++I M +  NPI ID  YCP+
Sbjct: 272 KDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPN 331

Query: 321 NIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITLEDINLTYEDQNSQ- 380
            +  ++  S V V D+T+++I GTS++  A++  C+   PCTG+T++D+N+ Y   N++ 
Sbjct: 332 KLCTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKT 391

Query: 381 -ASCRNAEGTTSGVVQPPSC 392
            A C NA+G+T G ++  +C
Sbjct: 392 MAICTNAKGSTKGCLKELAC 409

[Close]

BLAST of Sed0004572 vs. ExPASy TrEMBL
Match: A0A0A0KN91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409610 PE=3 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 3.4e-156
Identity = 270/383 (70.50%), Postives = 319/383 (83.29%), Query Frame = 0


Query: 10  LISFLLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTEPATINVPNGI 69
           L+S L   L+  LAAG  F+IVSLGA  DG TDAS A Q AW NACGS+EPATI VPNG 
Sbjct: 9   LLSLLFLFLNHGLAAGSTFNIVSLGAIADGKTDASHAFQEAWANACGSSEPATIYVPNGA 68

Query: 70  FYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSISGGVLDGQG 129
           FY+Q G F GPCKNN IT++I+GTL+ASS+IQ+LA + +WI F  +NGLSI GGV+DGQG
Sbjct: 69  FYIQSGNFSGPCKNNAITIVINGTLIASSNIQVLAQSQAWIAFRQINGLSIYGGVIDGQG 128

Query: 130 IGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNVNLQGVNVSS 189
           IGLWNCK SG +CP GATNL +SH+QNVN+ GL+SINSQMFNIV+YG +NV +QGVNVSS
Sbjct: 129 IGLWNCKHSGKSCPDGATNLEISHAQNVNVNGLSSINSQMFNIVVYGCENVQIQGVNVSS 188

Query: 190 PGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGPGHGVSIGSLG 249
            GDSPNTDGIHVQ++ +V I +T+IGTGDDC+SIGPGTTNLWME I CGPGHG+SIGSLG
Sbjct: 189 AGDSPNTDGIHVQQSLNVNISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGSLG 248

Query: 250 RGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNNVNNPIVIDQN 309
           R  +  GV+N+T+ TATFTGTQNGVRIKSW +PSN FA+ + FQHI   NVNNPI+IDQN
Sbjct: 249 RQVEEAGVENVTVTTATFTGTQNGVRIKSWGRPSNAFANKILFQHIRFYNVNNPILIDQN 308

Query: 310 YCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITLEDINLTYEDQ 369
           YCP+N GC  + SGVKV+D+TYQD++GTSAS+VAINFDCSPTNPCTGITLEDI LTY +Q
Sbjct: 309 YCPNNQGCPGQASGVKVSDVTYQDVNGTSASEVAINFDCSPTNPCTGITLEDIQLTYNNQ 368

Query: 370 NSQASCRNAEGTTSGVVQPPSCL 393
             +ASC+NA GT SG +QP SCL
Sbjct: 369 IPKASCKNARGTASGPLQPRSCL 391

[Close]

BLAST of Sed0004572 vs. ExPASy TrEMBL
Match: A0A6J1F3I5 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439547 PE=3 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 2.2e-155
Identity = 266/393 (67.68%), Postives = 325/393 (82.70%), Query Frame = 0


Query: 1   MALQGTTHLLISF-LLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTE 60
           MAL GT  L++SF LL  L+  LA G  FDIVSLGAKPDG TDAS  LQ AW  AC ST 
Sbjct: 1   MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTG 60

Query: 61  PATINVPNGIFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLS 120
           PATI+VP G FYVQ G F GPCKNN IT+ IDGTLVASS+IQ+LA T +WI F ++NGLS
Sbjct: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLS 120

Query: 121 ISGGVLDGQGIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQN 180
           I GGV+DG+G G+WNCK SGN CP GA NL + ++QNV I GL SINSQ+FNIV++G +N
Sbjct: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRN 180

Query: 181 VNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGP 240
           VN+QGV VS PGDSPNTDGIHVQE+SDVTIL++NIGTGDDC+SIGPGTTNLW+E++ CGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNN 300
           GHG+SIGSLGR     GVKN+T+ ++TFTG+ NGVRIKSWA+PSN FA+D+HFQHI ++N
Sbjct: 241 GHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDN 300

Query: 301 VNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITL 360
           V NPI+IDQNYCPH+ GC  + SGVK++++TY+DI GTSA+++ + FDC+PTNPCTG+TL
Sbjct: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTL 360

Query: 361 EDINLTYEDQNSQASCRNAEGTTSGVVQPPSCL 393
           EDI +TY DQ ++ASC +A+GT SGVV+P SCL
Sbjct: 361 EDIKVTYNDQIAKASCESAKGTASGVVEPASCL 393

[Close]

BLAST of Sed0004572 vs. ExPASy TrEMBL
Match: A0A6J1F362 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439543 PE=3 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.7e-155
Identity = 266/393 (67.68%), Postives = 324/393 (82.44%), Query Frame = 0


Query: 1   MALQGTTHLLISF-LLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTE 60
           MAL GT  LL+S  LL  L  ALA G   DIVSLGAKPDG TDASP LQ AW  AC ST 
Sbjct: 1   MALYGTLMLLLSLPLLLLLTYALADGLTLDIVSLGAKPDGKTDASPVLQTAWAKACDSTG 60

Query: 61  PATINVPNGIFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLS 120
           PATI+VP G FYVQ G F GPCKNN IT+ IDGTLVASSDIQ+LA T +WI F ++NGLS
Sbjct: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLS 120

Query: 121 ISGGVLDGQGIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQN 180
           I GGV+DG+G G+W+CK SGN CP GA NL ++++QNV I GL SINSQ+FNIV++G QN
Sbjct: 121 IHGGVIDGKGSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQN 180

Query: 181 VNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGP 240
           VN+QGV VS PGDSPNTDGIHVQE+SDVTIL++NIGTGDDC+SIGPGTTNLW+E++ CGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNN 300
           GHG+SIGSLG+     GVKN+T+ ++TFT + NGVRIKSWA+PS+ FA+D+HFQHI ++N
Sbjct: 241 GHGISIGSLGKSADEPGVKNVTVTSSTFTESTNGVRIKSWARPSSGFATDIHFQHITLDN 300

Query: 301 VNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITL 360
           V NPI+IDQNYCPH+ GC  + SGVK++++TY+DI GTSA+++ + FDCSPTNPCTG+TL
Sbjct: 301 VKNPIIIDQNYCPHDEGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCSPTNPCTGLTL 360

Query: 361 EDINLTYEDQNSQASCRNAEGTTSGVVQPPSCL 393
           EDI +TY DQ ++ASC+ A+GT SGVV+P SCL
Sbjct: 361 EDIKVTYNDQIAKASCKGAKGTASGVVEPASCL 393

[Close]

BLAST of Sed0004572 vs. ExPASy TrEMBL
Match: A0A6J1I926 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472172 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.4e-154
Identity = 266/393 (67.68%), Postives = 323/393 (82.19%), Query Frame = 0


Query: 1   MALQGTTHLLISF-LLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTE 60
           MA+  T  LLI   LL  L+ ALA G   DIVSLGAKPDG TDASP LQ AW  AC ST 
Sbjct: 1   MAIYETLMLLIFLPLLLFLNHALADGLTLDIVSLGAKPDGKTDASPVLQTAWAKACDSTG 60

Query: 61  PATINVPNGIFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLS 120
           PA+I+VP G FYVQ G F GPCKNN IT+ IDGTLVASSDIQ+LA T +WI F ++NGLS
Sbjct: 61  PASIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIEFKDVNGLS 120

Query: 121 ISGGVLDGQGIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQN 180
           I GGV+DG+G G+WNCK SGN CP GA NL ++++QNV I GL SINSQMFNIV++G QN
Sbjct: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEITNAQNVIINGLASINSQMFNIVVHGCQN 180

Query: 181 VNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGP 240
           VN+QGV VS PGDSPNTDGIHVQE+SDVTIL++NIGTGDDC+SIGPGTTNLW+E++ CGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNN 300
           GHG+SIGSLG+     GVKN+T+ ++TF+ T NGVRIKSW +PS+ FA+D+HFQHI ++N
Sbjct: 241 GHGISIGSLGKSANEPGVKNVTVTSSTFSETTNGVRIKSWGRPSSGFATDIHFQHITLDN 300

Query: 301 VNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITL 360
           V NPI+IDQNYCPH+ GC  + SGVK++D+TY+DI GTSA+K+ + FDCSPTNPCTG+TL
Sbjct: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISDVTYEDIKGTSATKIGVKFDCSPTNPCTGLTL 360

Query: 361 EDINLTYEDQNSQASCRNAEGTTSGVVQPPSCL 393
           EDI +TY+DQ ++ASC+ A+GT SGVV+P SCL
Sbjct: 361 EDIKVTYDDQIAKASCKGAKGTASGVVEPASCL 393

[Close]

BLAST of Sed0004572 vs. ExPASy TrEMBL
Match: A0A6J1IDK7 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472169 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 2.4e-154
Identity = 265/393 (67.43%), Postives = 323/393 (82.19%), Query Frame = 0


Query: 1   MALQGTTHLLISF-LLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTE 60
           MA+  T  LLI   LL  L+ ALA G   DIVSLGAKPDG TDASP LQ AW  AC ST 
Sbjct: 1   MAIYETLMLLIFLPLLLLLNHALADGLTLDIVSLGAKPDGKTDASPVLQTAWAKACDSTG 60

Query: 61  PATINVPNGIFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLS 120
           PA+I+VP G FYVQ G F GPCKNN IT+ IDGTLVASSDIQ+LA T +WI F ++NGLS
Sbjct: 61  PASIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIEFKDVNGLS 120

Query: 121 ISGGVLDGQGIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQN 180
           I GGV+DG+G G+WNCK SGN CP GA NL ++++QNV I GL SINSQMFNIV++G QN
Sbjct: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEITNAQNVIINGLASINSQMFNIVVHGCQN 180

Query: 181 VNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGP 240
           VN+QGV VS PGDSPNTDGIHVQE+SDVTIL++NIGTGDDC+SIGPGTTNLW+E++ CGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNN 300
           GHG+SIGSLG+     GVKN+T+ ++TF+ T NGVRIKSW +PS+ FA+D+HFQHI ++N
Sbjct: 241 GHGISIGSLGKSANEPGVKNVTVTSSTFSETTNGVRIKSWGRPSSGFATDIHFQHITLDN 300

Query: 301 VNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITL 360
           V NPI+IDQNYCPH+ GC  + SGVK++D+TY+DI GTSA+K+ + FDCSPTNPCTG+TL
Sbjct: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISDVTYEDIKGTSATKIGVKFDCSPTNPCTGLTL 360

Query: 361 EDINLTYEDQNSQASCRNAEGTTSGVVQPPSCL 393
           EDI +TY+DQ ++ASC+ A+GT SG+V+P SCL
Sbjct: 361 EDIKVTYDDQIAKASCKGAKGTASGMVEPASCL 393

[Close]

BLAST of Sed0004572 vs. TAIR 10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 433.7 bits (1114), Expect = 1.6e-121
Identity = 209/384 (54.43%), Postives = 275/384 (71.61%), Query Frame = 0


Query: 10  LISFLLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTEPATINVPNGI 69
           L+  LL  L ++ ++   ++I+S GAKPDG TD++ A    W  AC S +P TI VP G 
Sbjct: 5   LLIVLLFLLSVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPKGR 64

Query: 70  FYVQKGEFRG-PCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSISGGVLDGQ 129
           F ++   F G  CK   +T  I GTLVA SD +++   + WI F +L+G+S+ GGVLD Q
Sbjct: 65  FLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQ 124

Query: 130 GIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNVNLQGVNVS 189
           G  LW+CKKSG  CP GAT++    S+NV I GLTS+NSQMF++ + G  NV L GV VS
Sbjct: 125 GASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVS 184

Query: 190 SPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGPGHGVSIGSL 249
           + G+SPNTDGIHVQ +S V+ILN+ I TGDDCVSIGPGT  LW+E +ACGPGHG+SIGSL
Sbjct: 185 ADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSL 244

Query: 250 GRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNNVNNPIVIDQ 309
           G+     GV+N+T+KTATFTGT+NGVRIKSWA+PSN FA ++ FQH VMNNV NPIVIDQ
Sbjct: 245 GKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQ 304

Query: 310 NYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITLEDINLTYED 369
           NYCP N  C ++ SG+K++D+ + DIHGTSA++V +  DCS   PCTGI ++D+ LTY +
Sbjct: 305 NYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYRN 364

Query: 370 QNSQASCRNAEGTTSGVVQPPSCL 393
           + +   C +A G+ +G  +P SCL
Sbjct: 365 KPATTDCSHAGGSEAGFQRPNSCL 388

[Close]

BLAST of Sed0004572 vs. TAIR 10
Match: AT2G43870.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 427.6 bits (1098), Expect = 1.1e-119
Identity = 203/366 (55.46%), Postives = 268/366 (73.22%), Query Frame = 0


Query: 28  FDIVSLGAKPDGMTDASPALQAAWGNACGSTEPATINVPNGIFYVQKGEFRG-PCKNNDI 87
           ++++S GAKPDG TDA+ A  A W  AC S+ P TI VP G F ++   F G  CK   +
Sbjct: 21  YNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPKGRFLLRSVTFDGSKCKPKPV 80

Query: 88  TVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSISGGVLDGQGIGLWNCKKSGNTCPVGA 147
           T  IDGTLVA +D +++ + D WI+F +L+G+++ GGVLD +G  LW+CKKSG  CP GA
Sbjct: 81  TFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARGASLWDCKKSGKNCPSGA 140

Query: 148 TNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNVNLQGVNVSSPGDSPNTDGIHVQEASD 207
           T +    S NV + GLTS+NSQMF++V+ G  NV LQGV V + G+SPNTDGIHVQ +S 
Sbjct: 141 TTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKVLAAGNSPNTDGIHVQSSSS 200

Query: 208 VTILNTNIGTGDDCVSIGPGTTNLWMETIACGPGHGVSIGSLGRGQQGNGVKNMTLKTAT 267
           V+I NT I TGDDCVSIGPGT  LW+E +ACGPGHG+SIGSLG+    +GV+N+T+KT T
Sbjct: 201 VSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKDSVESGVQNVTVKTVT 260

Query: 268 FTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNNVNNPIVIDQNYCPHNIGCSDKGSGVKV 327
           FTGT NGVRIKSWA+PS+ FA ++ FQH VMNNV NPI+IDQNYCP +  C  + SG+K+
Sbjct: 261 FTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQNYCPDH-DCPRQVSGIKI 320

Query: 328 NDITYQDIHGTSASKVAINFDCSPTNPCTGITLEDINLTYEDQNSQASCRNAEGTTSGVV 387
           +D+ + DIHGTSA++V +  DCS   PCTGI LED+ LTY+++ + ++C +A G  +G  
Sbjct: 321 SDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTYQNKPAASACTHAGGIEAGFF 380

Query: 388 QPPSCL 393
           Q P+CL
Sbjct: 381 Q-PNCL 384

[Close]

BLAST of Sed0004572 vs. TAIR 10
Match: AT2G43860.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 382.9 bits (982), Expect = 3.2e-106
Identity = 197/395 (49.87%), Postives = 261/395 (66.08%), Query Frame = 0


Query: 6   TTHLLISFLLQTLDLALAAG------PRFDIVSLGAKPDGMTDASPALQAAWGNACGSTE 65
           T+ L++   L  LD  L +          +++S GAKPDG  D++ A  AAW  AC S  
Sbjct: 5   TSCLILPLALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACASAN 64

Query: 66  PATINVPNGIFYVQKGEFRG-PCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGL 125
           P TI VP G F V    F G  CK   I++ I G++VA  D +I+A +  WIWF ++  +
Sbjct: 65  PTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDV 124

Query: 126 SISGGVLDGQGIGLWNCKKS-GNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGN 185
           SI GG+LD QG  LW CK + G+ CP GA +L  S S N+ I GLTSINSQ F+IV+  +
Sbjct: 125 SIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNS 184

Query: 186 QNVNLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIAC 245
            NVN+ GV VS+  +SPNTDGIHV+ +  V I N+ IGTGDDC+SIGPG+TN++++TI C
Sbjct: 185 NNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRC 244

Query: 246 GPGHGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVM 305
           GPGHG+SIGSLGR ++  GV N+T+    F GT NGVRIK+W K SN FA ++ FQHI M
Sbjct: 245 GPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINM 304

Query: 306 NNVNNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGI 365
             V NPI+IDQ+YC H   C  + SGVKV+++ Y+DIHGTS ++VA+  DCS   PCTGI
Sbjct: 305 KMVKNPIIIDQHYCLHK-PCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGI 364

Query: 366 TLEDINLTYEDQNSQASCRNAEGTTSGVVQPPSCL 393
            ++D+NL    + +QASC NA G+ + VV    CL
Sbjct: 365 VMDDVNLVSVHRPAQASCDNANGSANDVVPFTPCL 398

[Close]

BLAST of Sed0004572 vs. TAIR 10
Match: AT1G05650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 377.1 bits (967), Expect = 1.7e-104
Identity = 189/393 (48.09%), Postives = 261/393 (66.41%), Query Frame = 0


Query: 1   MALQGTTHLLISFLLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTEP 60
           M     T  LI  LL  +D++ +A   F++VS GAKPDG+TD++ A   AW  ACGS   
Sbjct: 1   MTKSAITFPLIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAAS 60

Query: 61  ATINVPNGIFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSI 120
           AT+ VP G F ++   F GPCK+  IT  + GT+VA  D +   ++ SWI F  +N  S+
Sbjct: 61  ATVVVPTGTFLLKVITFGGPCKSK-ITFQVTGTVVAPEDYRTFGNSGSWILFNKVNRFSL 120

Query: 121 SGGVLDGQGIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNV 180
            GG  D +G G W+C+KSG  CP G  ++  + +++V I G+ S+NSQ+ ++ L G  NV
Sbjct: 121 VGGTFDARGSGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNV 180

Query: 181 NLQGVNVSSPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGPG 240
            ++ + + +PGDSPNTDG  VQ ++ VT+  + + TGDDCV+IG GT N  +  +ACGPG
Sbjct: 181 AVRNIRLVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPG 240

Query: 241 HGVSIGSLGRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNNV 300
           HGVSIGSL +    +GV+N+T+ ++ FTG+QNGVRIKSWA+PS  F  +V FQ+++M NV
Sbjct: 241 HGVSIGSLAKQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNV 300

Query: 301 NNPIVIDQNYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITLE 360
            NPI+IDQNYCP N GC  + SGVK+  +TY++I GTSA++ A+   CS +NPCTGITL+
Sbjct: 301 QNPIIIDQNYCPSNQGCPTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQ 360

Query: 361 DINLTYEDQNSQAS-CRNAEGTTSGVVQPPSCL 393
           DI LTY       S C NA G   GV+QP SCL
Sbjct: 361 DIKLTYNKGTPATSLCFNAVGKNLGVIQPTSCL 392

[Close]

BLAST of Sed0004572 vs. TAIR 10
Match: AT2G43890.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 375.2 bits (962), Expect = 6.6e-104
Identity = 183/384 (47.66%), Postives = 258/384 (67.19%), Query Frame = 0


Query: 9   LLISFLLQTLDLALAAGPRFDIVSLGAKPDGMTDASPALQAAWGNACGSTEPATINVPNG 68
           LL+ F    L  +  A   +++VS GAKPDG TD++ A   AW  AC S    T+ VP G
Sbjct: 10  LLMFFSSFLLMKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVTVPRG 69

Query: 69  IFYVQKGEFRGPCKNNDITVLIDGTLVASSDIQILAHTDSWIWFTNLNGLSISGGVLDGQ 128
            F ++  EFRGPC++  IT  I GT+VA SD + L ++  WI F  +N +SI GG LD +
Sbjct: 70  SFLLKPVEFRGPCRSR-ITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGGTLDAR 129

Query: 129 GIGLWNCKKSGNTCPVGATNLRVSHSQNVNIQGLTSINSQMFNIVLYGNQNVNLQGVNVS 188
           G   W C+KSG +CPVGA ++  + + +V + GLTSINSQ  ++V+    NV ++ V + 
Sbjct: 130 GASFWACRKSGKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRKVKLV 189

Query: 189 SPGDSPNTDGIHVQEASDVTILNTNIGTGDDCVSIGPGTTNLWMETIACGPGHGVSIGSL 248
           +P  SPNTDG+HVQ ++ VT+ +    TGDDC+SIGPGT NL+M  + CGPGHG+SIGSL
Sbjct: 190 APDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGISIGSL 249

Query: 249 GRGQQGNGVKNMTLKTATFTGTQNGVRIKSWAKPSNEFASDVHFQHIVMNNVNNPIVIDQ 308
           GR     GV+N+TL  + F+G+ NGVRIK+WA+ S  F  +V FQ+++M NV NPI++DQ
Sbjct: 250 GRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIVDQ 309

Query: 309 NYCPHNIGCSDKGSGVKVNDITYQDIHGTSASKVAINFDCSPTNPCTGITLEDINLTYED 368
           NYCP N GC  +GSGVK++ + Y++I GTS ++ A+ FDCS +NPC  I L DI LT+  
Sbjct: 310 NYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTFNG 369

Query: 369 QNSQASCRNAEGTTSGVVQPPSCL 393
           +++ ++C+N +G  +GVV P  CL
Sbjct: 370 RSATSTCKNIKGVKAGVVMPQGCL 392

The following BLAST results are available for this feature:

BLAST of Sed0004572 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140371.1	7.0e-156	70.50	polygalacturonase [Cucumis sativus]	[more]
XP_022932930.1	4.5e-155	67.68	polygalacturonase-like [Cucurbita moschata]	[more]
XP_022932928.1	7.7e-155	67.68	polygalacturonase-like [Cucurbita moschata]	[more]
XP_022973591.1	2.9e-154	67.68	polygalacturonase-like [Cucurbita maxima]	[more]
XP_022973588.1	5.0e-154	67.43	polygalacturonase-like [Cucurbita maxima]	[more]

BLAST of Sed0004572 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P48979	8.3e-128	58.24	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O22818	4.4e-105	49.87	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
P35339	1.6e-78	41.05	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
P35338	3.9e-77	41.05	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1	[more]
P26216	8.7e-77	40.53	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]

BLAST of Sed0004572 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN91	3.4e-156	70.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409610 PE=3 SV=1	[more]
A0A6J1F3I5	2.2e-155	67.68	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439547 PE=3 SV=1	[more]
A0A6J1F362	3.7e-155	67.68	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439543 PE=3 SV=1	[more]
A0A6J1I926	1.4e-154	67.68	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472172 PE=3 SV=1	[more]
A0A6J1IDK7	2.4e-154	67.43	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472169 PE=3 SV=1	[more]

BLAST of Sed0004572 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59850.1	1.6e-121	54.43	Pectin lyase-like superfamily protein	[more]
AT2G43870.1	1.1e-119	55.46	Pectin lyase-like superfamily protein	[more]
AT2G43860.1	3.2e-106	49.87	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	1.7e-104	48.09	Pectin lyase-like superfamily protein	[more]
AT2G43890.1	6.6e-104	47.66	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 287..308 e-value: 4900.0 score: 2.3 coord: 257..278 e-value: 990.0 score: 7.3 coord: 321..361 e-value: 5300.0 score: 2.0 coord: 177..203 e-value: 410.0 score: 9.8 coord: 154..176 e-value: 6400.0 score: 1.5 coord: 204..225 e-value: 2400.0 score: 4.5
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 20..392 e-value: 3.5E-106 score: 357.6
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 55..380 e-value: 1.4E-84 score: 284.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..394
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 11..391
None	No IPR available	PANTHER	PTHR31375:SF219	PUTATIVE-RELATED	coord: 11..391
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 12..392

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004572.1	Sed0004572.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity