Sed0004423 (gene) Chayote v1

Overview


Name	Sed0004423
Type	gene
Organism	Sechium edule (Chayote v1)
Description	U3 small nucleolar RNA-associated protein 15-like protein
Location	LG07: 2687453 .. 2688981 (+)
RNA-Seq Expression	Sed0004423
Synteny	Sed0004423

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATCCTAATTCTGTGAGTTTAACTAGGACCTTCCTGGTCAAACCAAAGCTCAAATCTAAGCCCAGGATCCCCAGTATCTAAATATTGGTCCTCTCTCAAACGTTGTGAGACCCCAAATCTTGTTTCATCCATATCTTCCCTTGACTTTTGTCCCACTAATCCTTCCATTTTCTCTGTTACGCACTCGGCCTCTCTCACTCTCTTTACCGCGCAAACAATGTCACCTATGTCTACCATCTCATTGCTGCATCAGACTTTTCGGGATTTATCCAAGTCTTTGATGTTAAATCTCGAACTCCACTTTGAAAGCTTCGTTCCCACTCGCATCCAGTTCGATTTGTTCAGTACCCTGTTCTTGATAAGCTCCACCTAGTATCTGGTGGGGATGATGCTGTTGTTAAATACTAGGATGTGGCGAATCAGATGCCAATTTTGGATTTTCTTGGCCATAAGGACTATGTTAGGTGTGGAGCTTGCTCCCCGGCTAGCACGGACATGTTTATCACCGGGTCGTATGATCACAATGTGAAGCTTTGGGATGCTAGAACAAATTTGAAATCGGTTTTGGAAGTGAATCATGGGAAACTGGTGGAGGATGTGATTTTCTTACCATCGGTGGGTTAGTTGCAACTGCTGGGGGCAATTCTGTGAAAATTTGGGGTGTGATTGGAGGTGGGAAAATGGTTTGCTCCATGGAGAGTCATAATAAGACTGTTACTTCACTATGTGTTGGAAAAACGAGCAAGGATAGTGAAGAAGATTCAGACTCGAATCAATTTAGAATCTTGAGTGTAGCACTAGATGGCTATATGCAGGTGTTTGATTATTCAAAAATGAAAGTAACTCATTCAATGAGATTCCCAACACCCCTCATGTCAGTTGGGGTTTCTCCTGATTGTGTAATACTAGAGTTATAGGGACTTCAACTGGGATCTTGTATGGTGGCAAGAGGAAGACTAACGAAACTACACCGAGTAAGTTGTTGAACCCGTGGAGCTTGGGGTCATCTGGGGAACCTCAAAGGCGAGCTTTGAGCCATTCCCACTTTCGATAAATCCATCGAGGTCAAGGGGAGAAGCCAACCGAAGGAAATTACCTAGTTATGAAACCAAAAAAAAATGAAGTTGACACAGAAAGATCAACTCCTGAAAAACTTCAGGCACAAGGATGCTTTAGTATCCATGTTGGCAAGTAAGAATCCCGAAAATGTGGTGGCTGTAATGGACGAACTAGTTGCAAGAAAGAAGCTGTTGAAATGCATTACGAATTTGGATAGGAAGGAGCTTGGATTACTATTCGTTTTCTTACAAAAGCATTCAACATTGCCCAGATACTCAAGCTTATTGATGGGATTGACTAGGAAGGTTCTCGAGCTACGGACCGAAGATATTAGAACCGTAAGTACGTTGAACGACCACGTTAGAAACATGAAACGATCTGTTAACGAGGAGATTCAGGTACAACAATCCTTGCTGGAAATACAAGGCATCATTTCACCTTTACTAAGAATTGCTGGAAGATGA

mRNA sequence

ATGGCCGATCCTAATTCTGTGAGTTTAACTAGGACCTTCCTGGTCAAACCAAAGCTCAAATCTAAGCCCAGGATCCCCATTCGATTTGTTCAGTACCCTGTTCTTGATAAGCTCCACCTAGTATCTGGTGGGGATGATGCTATGCCAATTTTGGATTTTCTTGGCCATAAGGACTATGTTAGGTGTGGAGCTTGCTCCCCGGCTAGCACGGACATGTTTATCACCGGGTCGTATGATCACAATGTGAAGCTTTGGGATGCTAGAACAAATTTGAAATCGGTTTTGGAAGTGAATCATGGGAAACTGGTGGAGGATGTGATTTTCTTACCATCGGTGGGTGGGAAAATGGTTTGCTCCATGGAGAGTCATAATAAGACTGTTACTTCACTATGTGTTGGAAAAACGAGCAAGGATAGTGAAGAAGATTCAGACTCGAATCAATTTAGAATCTTGAGTGTAGCACTAGATGGCTATATGCAGGTGTTTGATTATTCAAAAATGAAAGTAACTCATTCAATGAGATTCCCAACACCCCTCATGTCAGTTGGGGTTTCTCCTGATTGTTTGACACAGAAAGATCAACTCCTGAAAAACTTCAGGCACAAGGATGCTTTAGTATCCATGTTGGCAAGTAAGAATCCCGAAAATGTGGTGGCTGTAATGGACGAACTAGTTGCAAGAAAGAAGCTGTTGAAATGCATTACGAATTTGGATAGGAAGGAGCTTGGATTACTATTCGTTTTCTTACAAAAGCATTCAACATTGCCCAGATACTCAAGCTTATTGATGGGATTGACTAGGAAGGTTCTCGAGCTACGGACCGAAGATATTAGAACCGTAAGTACGTTGAACGACCACGTTAGAAACATGAAACGATCTGTTAACGAGGAGATTCAGGTACAACAATCCTTGCTGGAAATACAAGGCATCATTTCACCTTTACTAAGAATTGCTGGAAGATGA

Coding sequence (CDS)

ATGGCCGATCCTAATTCTGTGAGTTTAACTAGGACCTTCCTGGTCAAACCAAAGCTCAAATCTAAGCCCAGGATCCCCATTCGATTTGTTCAGTACCCTGTTCTTGATAAGCTCCACCTAGTATCTGGTGGGGATGATGCTATGCCAATTTTGGATTTTCTTGGCCATAAGGACTATGTTAGGTGTGGAGCTTGCTCCCCGGCTAGCACGGACATGTTTATCACCGGGTCGTATGATCACAATGTGAAGCTTTGGGATGCTAGAACAAATTTGAAATCGGTTTTGGAAGTGAATCATGGGAAACTGGTGGAGGATGTGATTTTCTTACCATCGGTGGGTGGGAAAATGGTTTGCTCCATGGAGAGTCATAATAAGACTGTTACTTCACTATGTGTTGGAAAAACGAGCAAGGATAGTGAAGAAGATTCAGACTCGAATCAATTTAGAATCTTGAGTGTAGCACTAGATGGCTATATGCAGGTGTTTGATTATTCAAAAATGAAAGTAACTCATTCAATGAGATTCCCAACACCCCTCATGTCAGTTGGGGTTTCTCCTGATTGTTTGACACAGAAAGATCAACTCCTGAAAAACTTCAGGCACAAGGATGCTTTAGTATCCATGTTGGCAAGTAAGAATCCCGAAAATGTGGTGGCTGTAATGGACGAACTAGTTGCAAGAAAGAAGCTGTTGAAATGCATTACGAATTTGGATAGGAAGGAGCTTGGATTACTATTCGTTTTCTTACAAAAGCATTCAACATTGCCCAGATACTCAAGCTTATTGATGGGATTGACTAGGAAGGTTCTCGAGCTACGGACCGAAGATATTAGAACCGTAAGTACGTTGAACGACCACGTTAGAAACATGAAACGATCTGTTAACGAGGAGATTCAGGTACAACAATCCTTGCTGGAAATACAAGGCATCATTTCACCTTTACTAAGAATTGCTGGAAGATGA

Protein sequence

MADPNSVSLTRTFLVKPKLKSKPRIPIRFVQYPVLDKLHLVSGGDDAMPILDFLGHKDYVRCGACSPASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPSVGGKMVCSMESHNKTVTSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKVTHSMRFPTPLMSVGVSPDCLTQKDQLLKNFRHKDALVSMLASKNPENVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTRKVLELRTEDIRTVSTLNDHVRNMKRSVNEEIQVQQSLLEIQGIISPLLRIAGR

Homology

[Close]

BLAST of Sed0004423 vs. NCBI nr
Match: XP_022150272.1 (protein SLOW WALKER 1 [Momordica charantia] >XP_022150273.1 protein SLOW WALKER 1 [Momordica charantia])

HSP 1 Score: 454.1 bits (1167), Expect = 9.7e-124
Identity = 254/405 (62.72%), Postives = 279/405 (68.89%), Query Frame = 0


Query: 18  KLKSKPRIPIRFVQYPVLDKLHLVSGGDDAM----------PILDFLGHKDYVRCGACSP 77
           KL+S  R P++FVQYPVLDKLHLVSGGDDA+          PI DFLGHKDYVRCGACSP
Sbjct: 126 KLRSHSR-PVQFVQYPVLDKLHLVSGGDDAVVKYWDVASQTPISDFLGHKDYVRCGACSP 185

Query: 78  ASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS---------------- 137
           +S DMFITGSYDH VKLWDARTN ++VLE+NHGK VEDVIFLPS                
Sbjct: 186 SSMDMFITGSYDHMVKLWDARTNSQTVLEMNHGKPVEDVIFLPSGGLVATAGGNYVKIWD 245

Query: 138 --VGGKMVCSMESHNKTVTSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKV 197
              GGKM+CSMESHNKTVTSLCVGK   DS E+SD  QFRILSVALDGYM+VFDYSKMKV
Sbjct: 246 VIGGGKMICSMESHNKTVTSLCVGKMGNDSGEESD--QFRILSVALDGYMKVFDYSKMKV 305

Query: 198 THSMRFPTPLMSVGVSPDC----------------------------------------- 257
           THSMRFP+PLMS+G SPDC                                         
Sbjct: 306 THSMRFPSPLMSIGFSPDCSTRVIGTSNGVLYAGKRKPKETTPSNLSNTWSLGSVGEPQR 365

Query: 258 ---------------------------------LTQKDQLLKNFRHKDALVSMLASKNPE 317
                                            LT+ D+LLK FRHKDALVS+LASKNPE
Sbjct: 366 RALRPSNFRYFHRGQGEKPTEGDYLLMKPKKVKLTEHDKLLKKFRHKDALVSVLASKNPE 425

Query: 318 NVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTRKVLELRTE 321
           NVVAVM+ELVARKKLLKC++NLDR+ELGLL VFLQKHSTLPRYSSLLMGLTRKV+ELRTE
Sbjct: 426 NVVAVMEELVARKKLLKCVSNLDREELGLLLVFLQKHSTLPRYSSLLMGLTRKVIELRTE 485

[Close]

BLAST of Sed0004423 vs. NCBI nr
Match: XP_008451418.1 (PREDICTED: protein SLOW WALKER 1 [Cucumis melo])

HSP 1 Score: 451.1 bits (1159), Expect = 8.2e-123
Identity = 256/406 (63.05%), Postives = 278/406 (68.47%), Query Frame = 0


Query: 18  KLKSKPRIPIRFVQYPVLDKLHLVSGGDDAM----------PILDFLGHKDYVRCGACSP 77
           KL+S  R P++FVQYPVLDKLHLVSGGDDA+          PI DFLGHKDYVRCGACSP
Sbjct: 126 KLRSHSR-PVQFVQYPVLDKLHLVSGGDDAVVKYWDVASQTPISDFLGHKDYVRCGACSP 185

Query: 78  ASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS---------------- 137
           AS DMFITGSYDH VKLWDARTN KSVLEVNHGK VEDVIFLPS                
Sbjct: 186 ASMDMFITGSYDHTVKLWDARTNSKSVLEVNHGKPVEDVIFLPSGGLVATAGGNSVKIWD 245

Query: 138 --VGGKMVCSMESHNKTVTSLCVG-KTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMK 197
              GGKMVCSMESHNKTVTSLCVG K  +DS E+SD  QFRILSVALDGYM+VFDYSKMK
Sbjct: 246 VIGGGKMVCSMESHNKTVTSLCVGKKLGQDSGEESD--QFRILSVALDGYMKVFDYSKMK 305

Query: 198 VTHSMRFPTPLMSVGVSPDC---------------------------------------- 257
           VTHSMRFPTPLMSVG SPDC                                        
Sbjct: 306 VTHSMRFPTPLMSVGFSPDCSTRVIGTSNGILYAGKRKTKESTTTNLSNPWSLGTVGEPQ 365

Query: 258 ----------------------------------LTQKDQLLKNFRHKDALVSMLASKNP 317
                                             LT+ D+LLK FRHKDALVS+LAS+NP
Sbjct: 366 KRVLRPSHFRYFHRGQGEKPTEGDYLVMKPKKVKLTEHDKLLKKFRHKDALVSVLASRNP 425

Query: 318 ENVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTRKVLELRT 321
           ENVVAVM+EL+ARKKLLKC+ NLDR+ELGLL  FLQKHSTLPRYSSLLMGLTRKVLELR+
Sbjct: 426 ENVVAVMEELIARKKLLKCVPNLDREELGLLLGFLQKHSTLPRYSSLLMGLTRKVLELRS 485

[Close]

BLAST of Sed0004423 vs. NCBI nr
Match: XP_038896112.1 (protein SLOW WALKER 1 [Benincasa hispida] >XP_038896113.1 protein SLOW WALKER 1 [Benincasa hispida] >XP_038896114.1 protein SLOW WALKER 1 [Benincasa hispida])

HSP 1 Score: 448.7 bits (1153), Expect = 4.1e-122
Identity = 259/413 (62.71%), Postives = 279/413 (67.55%), Query Frame = 0


Query: 10  TRTFLVKPKLKSKPRIPIRFVQYPVLDKLHLVSGGDDAM----------PILDFLGHKDY 69
           TRT L K +  S    P++FVQYPVLDKLHLVSGGDDA+          PI DFLGHKDY
Sbjct: 120 TRTPLRKLRSHSH---PVQFVQYPVLDKLHLVSGGDDAIVKYWDVASQTPISDFLGHKDY 179

Query: 70  VRCGACSPASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS-------- 129
           VRCGACSPAS DMFITGSYDH VKLWDARTN KSVLEVNHGK VEDVIFLPS        
Sbjct: 180 VRCGACSPASMDMFITGSYDHTVKLWDARTNSKSVLEVNHGKPVEDVIFLPSGGLVATAG 239

Query: 130 ----------VGGKMVCSMESHNKTVTSLCVG-KTSKDSEEDSDSNQFRILSVALDGYMQ 189
                      GGK+VCSMESHNKTVTSLCVG K  +DS E+SD  QFRILSVALDGYM+
Sbjct: 240 GNSVKIWDVIGGGKIVCSMESHNKTVTSLCVGKKLGQDSGEESD--QFRILSVALDGYMK 299

Query: 190 VFDYSKMKVTHSMRFPTPLMSVGVSPDC-------------------------------- 249
           VFDYS MKVTHSMRFPTPLMSVG SPDC                                
Sbjct: 300 VFDYSNMKVTHSMRFPTPLMSVGFSPDCSTRVIGTSNGILYAGKRKTKEATLSNLSNPWS 359

Query: 250 -----------------------------------------LTQKDQLLKNFRHKDALVS 309
                                                    LT+ D+LLK FRHKDALVS
Sbjct: 360 LGTGEPQRRVLRPSHFRYFHRGQGEKPTEGDYLVMKPKKVKLTEHDKLLKKFRHKDALVS 419

Query: 310 MLASKNPENVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTR 321
           +LAS+NPENVVAVM+ELVARKKLLKCI+NLDR ELGLL VFLQKHSTLPRYS LLMGLTR
Sbjct: 420 VLASRNPENVVAVMEELVARKKLLKCISNLDRDELGLLLVFLQKHSTLPRYSRLLMGLTR 479

[Close]

BLAST of Sed0004423 vs. NCBI nr
Match: XP_023548467.1 (protein SLOW WALKER 1-like [Cucurbita pepo subsp. pepo] >XP_023548468.1 protein SLOW WALKER 1-like [Cucurbita pepo subsp. pepo] >XP_023548470.1 protein SLOW WALKER 1-like [Cucurbita pepo subsp. pepo] >XP_023548471.1 protein SLOW WALKER 1-like [Cucurbita pepo subsp. pepo] >XP_023548491.1 protein SLOW WALKER 1-like [Cucurbita pepo subsp. pepo] >XP_023548492.1 protein SLOW WALKER 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 448.7 bits (1153), Expect = 4.1e-122
Identity = 255/405 (62.96%), Postives = 276/405 (68.15%), Query Frame = 0


Query: 18  KLKSKPRIPIRFVQYPVLDKLHLVSGGDDAM----------PILDFLGHKDYVRCGACSP 77
           KL+S  R P+ FVQYPVLDKLHLVSGGDDA+          P+LDFLGHKDYVR GACSP
Sbjct: 126 KLRSHLR-PVHFVQYPVLDKLHLVSGGDDAVVKYWDVASQTPLLDFLGHKDYVRSGACSP 185

Query: 78  ASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS---------------- 137
           +S DMF+TGSYDH VKLWDARTN KSVLEVNHGK VEDVIFLPS                
Sbjct: 186 SSMDMFVTGSYDHTVKLWDARTNSKSVLEVNHGKPVEDVIFLPSGGLVATAGGNSVKIWD 245

Query: 138 --VGGKMVCSMESHNKTVTSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKV 197
              GGKMV SMESHNKTVTSLCVGK  KDS E+SD  QFRILSVALDGYM+VFDYSKMKV
Sbjct: 246 VIGGGKMVGSMESHNKTVTSLCVGKLGKDSGEESD--QFRILSVALDGYMKVFDYSKMKV 305

Query: 198 THSMRFPTPLMSVGVSPDC----------------------------------------- 257
           THSMRFPTPLMSVG SPDC                                         
Sbjct: 306 THSMRFPTPLMSVGFSPDCSSRVIGTSNGILYAGKRKTKGITSSNLSNPWSLGSVGEPQR 365

Query: 258 ---------------------------------LTQKDQLLKNFRHKDALVSMLASKNPE 317
                                            LT+ D+LLK FRHKDALVS+LASKNPE
Sbjct: 366 RALRPSHFRYFHRGQGEKPTEGDYLVMKPKKVKLTEHDKLLKKFRHKDALVSVLASKNPE 425

Query: 318 NVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTRKVLELRTE 321
           NVVAVM+ELVARKKLLKC++NL+ +ELGLL VFLQKHSTLPRYSSLLMGLTRKVLELR E
Sbjct: 426 NVVAVMEELVARKKLLKCVSNLNTEELGLLLVFLQKHSTLPRYSSLLMGLTRKVLELRAE 485

[Close]

BLAST of Sed0004423 vs. NCBI nr
Match: KAA0057548.1 (protein SLOW WALKER 1 [Cucumis melo var. makuwa] >TYK18269.1 protein SLOW WALKER 1 [Cucumis melo var. makuwa])

HSP 1 Score: 448.4 bits (1152), Expect = 5.3e-122
Identity = 255/406 (62.81%), Postives = 277/406 (68.23%), Query Frame = 0


Query: 18  KLKSKPRIPIRFVQYPVLDKLHLVSGGDDAM----------PILDFLGHKDYVRCGACSP 77
           KL+S  R P++FVQYPVL KLHLVSGGDDA+          PI DFLGHKDYVRCGACSP
Sbjct: 126 KLRSHSR-PVQFVQYPVLGKLHLVSGGDDAVVKYWDVASQTPISDFLGHKDYVRCGACSP 185

Query: 78  ASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS---------------- 137
           AS DMFITGSYDH VKLWDARTN KSVLEVNHGK VEDVIFLPS                
Sbjct: 186 ASMDMFITGSYDHTVKLWDARTNSKSVLEVNHGKPVEDVIFLPSGGLVATAGGNSVKIWD 245

Query: 138 --VGGKMVCSMESHNKTVTSLCVG-KTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMK 197
              GGKMVCSMESHNKTVTSLCVG K  +DS E+SD  QFRILSVALDGYM+VFDYSKMK
Sbjct: 246 VIGGGKMVCSMESHNKTVTSLCVGKKLGQDSGEESD--QFRILSVALDGYMKVFDYSKMK 305

Query: 198 VTHSMRFPTPLMSVGVSPDC---------------------------------------- 257
           VTHSMRFPTPLMSVG SPDC                                        
Sbjct: 306 VTHSMRFPTPLMSVGFSPDCSTRVIGTSNGILYAGKRKTKESTTTNLSNPWSLGTVGEPQ 365

Query: 258 ----------------------------------LTQKDQLLKNFRHKDALVSMLASKNP 317
                                             LT+ D+LLK FRHKDALVS+LAS+NP
Sbjct: 366 KRVLRPSHFRYFHRGQGEKPTEGDYLVMKPKKVKLTEHDKLLKKFRHKDALVSVLASRNP 425

Query: 318 ENVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTRKVLELRT 321
           ENVVAVM+EL+ARKKLLKC+ NLDR+ELGLL  FLQKHSTLPRYSSLLMGLTRKVLELR+
Sbjct: 426 ENVVAVMEELIARKKLLKCVPNLDREELGLLLGFLQKHSTLPRYSSLLMGLTRKVLELRS 485

[Close]

BLAST of Sed0004423 vs. ExPASy Swiss-Prot
Match: O82266 (Protein SLOW WALKER 1 OS=Arabidopsis thaliana OX=3702 GN=SWA1 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.1e-89
Identity = 190/401 (47.38%), Postives = 236/401 (58.85%), Query Frame = 0


Query: 26  PIRFVQYPVLDKLHLVSGGDD----------AMPILDFLGHKDYVRCGACSPASTDMFIT 85
           P RFV+YPV DKLHLVSGGDD          A  I D LGHKDYVRCG CSP +  M +T
Sbjct: 137 PARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVT 196

Query: 86  GSYDHNVKLWDARTNLKS-VLEVNHGKLVEDVIFLPS------------------VGGKM 145
           GSYDH VK+WDAR +  + + E+NHG  VEDV++LPS                   GGKM
Sbjct: 197 GSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVYLPSGGLIATAGGNSVKVWDLIGGGKM 256

Query: 146 VCSMESHNKTVTSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKVTHSMRFP 205
           VCSMESHNKTVTSL V +         +S + R++SVALDGYM+VFDY + KVT+SMRFP
Sbjct: 257 VCSMESHNKTVTSLRVAR--------MESAESRLVSVALDGYMKVFDYGRAKVTYSMRFP 316

Query: 206 TPLMSVGVSPD------------------------------------------------- 265
            PLMS+G+SPD                                                 
Sbjct: 317 APLMSLGLSPDGSTRVIGGSNGMVFAGKKKVRDVVGGQKKSLNLWSLISDVDESRRRALR 376

Query: 266 ----------------------------CLTQKDQLLKNFRHKDALVSMLASKNPENVVA 321
                                        LT+ D+LLK FRHK+ALVS+L  K P NVVA
Sbjct: 377 PTYFRYFQRGQSEKPSKDDYLVKEKKGLKLTRHDKLLKKFRHKEALVSVLEEKKPANVVA 436

[Close]

BLAST of Sed0004423 vs. ExPASy Swiss-Prot
Match: Q7ZXZ2 (U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus laevis OX=8355 GN=utp15 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.3e-33
Identity = 107/380 (28.16%), Postives = 169/380 (44.47%), Query Frame = 0


Query: 27  IRFVQYPVLDKLHLVSGGDD----------AMPILDFLGHKDYVRCGACSPASTDMFITG 86
           + FV +   DK  +VSG DD           + I  +  H DY+RCG  S  + D+F TG
Sbjct: 125 VHFVDF-TSDKYRIVSGSDDYTSKLWDIPNGIEIASYKEHTDYIRCGCTSSLNNDLFATG 184

Query: 87  SYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS------------------VGGKMVC 146
           SYDH +K++D RT+ KSV+ ++HG+ VE V+  PS                   GG+++ 
Sbjct: 185 SYDHTIKVFDGRTD-KSVMSMDHGQPVESVLLFPSGGLLVSAGGRYVKVWDILKGGQLLV 244

Query: 147 SMESHNKTVTSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKVTHSMRFPTP 206
           S+ +H+KTVT LC+          S S Q R+LS +LD +++V+     KV HS  +   
Sbjct: 245 SLRNHHKTVTCLCL----------SSSGQ-RLLSGSLDRHVKVYSTMNYKVVHSFDYAAS 304

Query: 207 LMSVGVSPD--------------------------------------------------- 266
           ++S+ ++PD                                                   
Sbjct: 305 ILSLALAPDDQMIVVGMTNGVLNIKHRKPEERKPLQSTTKRHPRYRVFVRGKDYMPKQDD 364

Query: 267 ---------CLTQKDQLLKNFRHKDALVSMLAS----KNPENVVAVMDELVARKKLLKCI 315
                     L + DQLLK F    AL ++L S    K PE  VAVM+EL  R  L   +
Sbjct: 365 IYVSKPVREHLKKYDQLLKGFHMSKALDAVLQSQIRTKKPEVTVAVMNELKRRGTLKNAL 424

[Close]

BLAST of Sed0004423 vs. ExPASy Swiss-Prot
Match: Q5F3D7 (U3 small nucleolar RNA-associated protein 15 homolog OS=Gallus gallus OX=9031 GN=UTP15 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-32
Identity = 100/370 (27.03%), Postives = 166/370 (44.86%), Query Frame = 0


Query: 36  DKLHLVSGGDD----------AMPILDFLGHKDYVRCGACSPASTDMFITGSYDHNVKLW 95
           DK  + SGGDD          A  I+ +  H DYVRCG  S  + D+FITGSYDH VK++
Sbjct: 133 DKYRIFSGGDDYSSSLWDIPSATEIVSYSEHSDYVRCGCASKLNGDVFITGSYDHTVKVF 192

Query: 96  DARTNLKSVLEVNHGKLVEDVIFLPS------------------VGGKMVCSMESHNKTV 155
           DART   SV+ + HG  VE V+  PS                   GG+++ S+++H+KTV
Sbjct: 193 DARTK-SSVMTIEHGHPVESVLLFPSGGLLVSAGGRYVKVWDVLKGGQLLVSLKNHHKTV 252

Query: 156 TSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKVTHSMRFPTPLMSVGVSPD 215
           T LC+  + +           R+LS +LD +++++  +  KV HS  + T ++S+ +SP+
Sbjct: 253 TCLCLNSSGQ-----------RLLSGSLDRHVKIYSTTSYKVVHSFNYATSILSLALSPE 312

Query: 216 ----------------------------------------------------------CL 275
                                                                     C+
Sbjct: 313 DETIIVGMTNGVLNVKHRKPEESKEKSQKKRQPAYRTYVKGRNYMPKQEDFFVSKPGRCI 372

Query: 276 TQK-DQLLKNFRHKDALVSMLASK----NPENVVAVMDELVARKKLLKCITNLDRKELGL 315
            +K D+LLK+F+   AL ++L        PE  VAVM EL  R  L   +   D K++ L
Sbjct: 373 MRKYDKLLKSFQSSKALDAVLEPHIRLYTPEVTVAVMQELNRRGTLRSALAGRDEKQISL 432

[Close]

BLAST of Sed0004423 vs. ExPASy Swiss-Prot
Match: Q5XGE2 (U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus tropicalis OX=8364 GN=utp15 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.0e-32
Identity = 102/380 (26.84%), Postives = 171/380 (45.00%), Query Frame = 0


Query: 27  IRFVQYPVLDKLHLVSGGDD----------AMPILDFLGHKDYVRCGACSPASTDMFITG 86
           + FV +   DK  +VSG DD           + I  +  H DY+RCG  S  + D+F TG
Sbjct: 125 VHFVDF-TADKYRIVSGSDDYTSRLWDIPNGVEITSYNEHTDYIRCGCTSALNNDLFATG 184

Query: 87  SYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS------------------VGGKMVC 146
           SYDH +K++D RT+ KSV+ ++HG+ VE V+  PS                   GG+++ 
Sbjct: 185 SYDHTIKIFDGRTD-KSVMSMDHGQPVESVLLFPSGGLLVSAGGRYVKVWDILKGGQLLV 244

Query: 147 SMESHNKTVTSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKVTHSMRFPTP 206
           S+ +H+KTVTSLC+          S S Q R+LS +LD +++V+     KV HS  +   
Sbjct: 245 SLRNHHKTVTSLCL----------SSSGQ-RLLSASLDRHVKVYSTMNYKVVHSFDYAAS 304

Query: 207 LMSVGVSPD--------------------------------------------------- 266
           ++S+ ++PD                                                   
Sbjct: 305 ILSLALAPDDQMIVVGMTNGVLNIKHRKPEERKQLQSTTKRHPRYRVFVRGKDYMPKQDD 364

Query: 267 ---------CLTQKDQLLKNFRHKDALVSML----ASKNPENVVAVMDELVARKKLLKCI 315
                     L + D+LLK F   +AL ++L     ++ PE  VAVM+EL  R  L   +
Sbjct: 365 IFISKPVIAHLKKYDKLLKGFHMTEALDTVLQPQIRNQRPEVTVAVMNELKRRGTLKNAL 424

[Close]

BLAST of Sed0004423 vs. ExPASy Swiss-Prot
Match: A7MB12 (U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus OX=9913 GN=UTP15 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-30
Identity = 108/370 (29.19%), Postives = 166/370 (44.86%), Query Frame = 0


Query: 36  DKLHLVSGGDD----------AMPILDFLGHKDYVRCGACSPASTDMFITGSYDHNVKLW 95
           DK H+VSG DD          +  IL F  H DYVRCG  S  +TD+F+TGSYDH VK++
Sbjct: 133 DKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNTDLFVTGSYDHTVKMF 192

Query: 96  DARTNLKSVLEVNHGKLVEDVIFLPS------------------VGGKMVCSMESHNKTV 155
           DARTN +SV+ V HG+ VE V+  PS                   GG+++ S+++H+KTV
Sbjct: 193 DARTN-QSVISVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 252

Query: 156 TSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKVTHSMRFPTPLMS------ 215
           T LC+          S S Q R+LS +LD  ++V+  +  KV HS  +   ++S      
Sbjct: 253 TCLCL----------SSSGQ-RLLSGSLDRKVKVYSTTSYKVVHSFDYTASILSLALAHE 312

Query: 216 -----VGVSPDCLTQK-------------------------------------------- 275
                VG++   L+ K                                            
Sbjct: 313 DETIVVGMTNGILSVKHRKSEAKKDSVPRRRRPAYRTFIKGKNYMKQQDDILINRPSKKH 372

Query: 276 ----DQLLKNFRHKDALVSML----ASKNPENVVAVMDELVARKKLLKCITNLDRKELGL 315
               D+ LKNFR   AL  +L      K PE  V+++ EL  R  L   +   D KE+  
Sbjct: 373 LELYDRDLKNFRISKALDRVLEPTCTIKTPEVTVSIIKELNRRGVLANALAGRDEKEISR 432

[Close]

BLAST of Sed0004423 vs. ExPASy TrEMBL
Match: A0A6J1D905 (protein SLOW WALKER 1 OS=Momordica charantia OX=3673 GN=LOC111018477 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 4.7e-124
Identity = 254/405 (62.72%), Postives = 279/405 (68.89%), Query Frame = 0


Query: 18  KLKSKPRIPIRFVQYPVLDKLHLVSGGDDAM----------PILDFLGHKDYVRCGACSP 77
           KL+S  R P++FVQYPVLDKLHLVSGGDDA+          PI DFLGHKDYVRCGACSP
Sbjct: 126 KLRSHSR-PVQFVQYPVLDKLHLVSGGDDAVVKYWDVASQTPISDFLGHKDYVRCGACSP 185

Query: 78  ASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS---------------- 137
           +S DMFITGSYDH VKLWDARTN ++VLE+NHGK VEDVIFLPS                
Sbjct: 186 SSMDMFITGSYDHMVKLWDARTNSQTVLEMNHGKPVEDVIFLPSGGLVATAGGNYVKIWD 245

Query: 138 --VGGKMVCSMESHNKTVTSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKV 197
              GGKM+CSMESHNKTVTSLCVGK   DS E+SD  QFRILSVALDGYM+VFDYSKMKV
Sbjct: 246 VIGGGKMICSMESHNKTVTSLCVGKMGNDSGEESD--QFRILSVALDGYMKVFDYSKMKV 305

Query: 198 THSMRFPTPLMSVGVSPDC----------------------------------------- 257
           THSMRFP+PLMS+G SPDC                                         
Sbjct: 306 THSMRFPSPLMSIGFSPDCSTRVIGTSNGVLYAGKRKPKETTPSNLSNTWSLGSVGEPQR 365

Query: 258 ---------------------------------LTQKDQLLKNFRHKDALVSMLASKNPE 317
                                            LT+ D+LLK FRHKDALVS+LASKNPE
Sbjct: 366 RALRPSNFRYFHRGQGEKPTEGDYLLMKPKKVKLTEHDKLLKKFRHKDALVSVLASKNPE 425

Query: 318 NVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTRKVLELRTE 321
           NVVAVM+ELVARKKLLKC++NLDR+ELGLL VFLQKHSTLPRYSSLLMGLTRKV+ELRTE
Sbjct: 426 NVVAVMEELVARKKLLKCVSNLDREELGLLLVFLQKHSTLPRYSSLLMGLTRKVIELRTE 485

[Close]

BLAST of Sed0004423 vs. ExPASy TrEMBL
Match: A0A1S3BS86 (protein SLOW WALKER 1 OS=Cucumis melo OX=3656 GN=LOC103492718 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 4.0e-123
Identity = 256/406 (63.05%), Postives = 278/406 (68.47%), Query Frame = 0


Query: 18  KLKSKPRIPIRFVQYPVLDKLHLVSGGDDAM----------PILDFLGHKDYVRCGACSP 77
           KL+S  R P++FVQYPVLDKLHLVSGGDDA+          PI DFLGHKDYVRCGACSP
Sbjct: 126 KLRSHSR-PVQFVQYPVLDKLHLVSGGDDAVVKYWDVASQTPISDFLGHKDYVRCGACSP 185

Query: 78  ASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS---------------- 137
           AS DMFITGSYDH VKLWDARTN KSVLEVNHGK VEDVIFLPS                
Sbjct: 186 ASMDMFITGSYDHTVKLWDARTNSKSVLEVNHGKPVEDVIFLPSGGLVATAGGNSVKIWD 245

Query: 138 --VGGKMVCSMESHNKTVTSLCVG-KTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMK 197
              GGKMVCSMESHNKTVTSLCVG K  +DS E+SD  QFRILSVALDGYM+VFDYSKMK
Sbjct: 246 VIGGGKMVCSMESHNKTVTSLCVGKKLGQDSGEESD--QFRILSVALDGYMKVFDYSKMK 305

Query: 198 VTHSMRFPTPLMSVGVSPDC---------------------------------------- 257
           VTHSMRFPTPLMSVG SPDC                                        
Sbjct: 306 VTHSMRFPTPLMSVGFSPDCSTRVIGTSNGILYAGKRKTKESTTTNLSNPWSLGTVGEPQ 365

Query: 258 ----------------------------------LTQKDQLLKNFRHKDALVSMLASKNP 317
                                             LT+ D+LLK FRHKDALVS+LAS+NP
Sbjct: 366 KRVLRPSHFRYFHRGQGEKPTEGDYLVMKPKKVKLTEHDKLLKKFRHKDALVSVLASRNP 425

Query: 318 ENVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTRKVLELRT 321
           ENVVAVM+EL+ARKKLLKC+ NLDR+ELGLL  FLQKHSTLPRYSSLLMGLTRKVLELR+
Sbjct: 426 ENVVAVMEELIARKKLLKCVPNLDREELGLLLGFLQKHSTLPRYSSLLMGLTRKVLELRS 485

[Close]

BLAST of Sed0004423 vs. ExPASy TrEMBL
Match: A0A5A7UR01 (Protein SLOW WALKER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002110 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.6e-122
Identity = 255/406 (62.81%), Postives = 277/406 (68.23%), Query Frame = 0


Query: 18  KLKSKPRIPIRFVQYPVLDKLHLVSGGDDAM----------PILDFLGHKDYVRCGACSP 77
           KL+S  R P++FVQYPVL KLHLVSGGDDA+          PI DFLGHKDYVRCGACSP
Sbjct: 126 KLRSHSR-PVQFVQYPVLGKLHLVSGGDDAVVKYWDVASQTPISDFLGHKDYVRCGACSP 185

Query: 78  ASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS---------------- 137
           AS DMFITGSYDH VKLWDARTN KSVLEVNHGK VEDVIFLPS                
Sbjct: 186 ASMDMFITGSYDHTVKLWDARTNSKSVLEVNHGKPVEDVIFLPSGGLVATAGGNSVKIWD 245

Query: 138 --VGGKMVCSMESHNKTVTSLCVG-KTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMK 197
              GGKMVCSMESHNKTVTSLCVG K  +DS E+SD  QFRILSVALDGYM+VFDYSKMK
Sbjct: 246 VIGGGKMVCSMESHNKTVTSLCVGKKLGQDSGEESD--QFRILSVALDGYMKVFDYSKMK 305

Query: 198 VTHSMRFPTPLMSVGVSPDC---------------------------------------- 257
           VTHSMRFPTPLMSVG SPDC                                        
Sbjct: 306 VTHSMRFPTPLMSVGFSPDCSTRVIGTSNGILYAGKRKTKESTTTNLSNPWSLGTVGEPQ 365

Query: 258 ----------------------------------LTQKDQLLKNFRHKDALVSMLASKNP 317
                                             LT+ D+LLK FRHKDALVS+LAS+NP
Sbjct: 366 KRVLRPSHFRYFHRGQGEKPTEGDYLVMKPKKVKLTEHDKLLKKFRHKDALVSVLASRNP 425

Query: 318 ENVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTRKVLELRT 321
           ENVVAVM+EL+ARKKLLKC+ NLDR+ELGLL  FLQKHSTLPRYSSLLMGLTRKVLELR+
Sbjct: 426 ENVVAVMEELIARKKLLKCVPNLDREELGLLLGFLQKHSTLPRYSSLLMGLTRKVLELRS 485

[Close]

BLAST of Sed0004423 vs. ExPASy TrEMBL
Match: A0A0A0K5R9 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G390220 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 5.8e-122
Identity = 255/406 (62.81%), Postives = 276/406 (67.98%), Query Frame = 0


Query: 18  KLKSKPRIPIRFVQYPVLDKLHLVSGGDDAM----------PILDFLGHKDYVRCGACSP 77
           KL+S  R P++FVQYPVLDKLHLVSGGDDA+          PI DFLGHKDYVRCGACSP
Sbjct: 126 KLRSHSR-PVQFVQYPVLDKLHLVSGGDDAVVKYWDVASQTPISDFLGHKDYVRCGACSP 185

Query: 78  ASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS---------------- 137
           AS DMFITGSYDH VKLWDARTN KSVLEVNHGK VEDVIFLPS                
Sbjct: 186 ASMDMFITGSYDHTVKLWDARTNSKSVLEVNHGKPVEDVIFLPSGGLVATAGGNSVKIWD 245

Query: 138 --VGGKMVCSMESHNKTVTSLCVG-KTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMK 197
              GGKMVCSMESHNKTVTSLCVG K  +DS E+SD  QFRILSVALDGYM+VFDYSKMK
Sbjct: 246 VIGGGKMVCSMESHNKTVTSLCVGKKLGQDSGEESD--QFRILSVALDGYMKVFDYSKMK 305

Query: 198 VTHSMRFPTPLMSVGVSPDC---------------------------------------- 257
           VTHSMRFPTPLMSVG SPDC                                        
Sbjct: 306 VTHSMRFPTPLMSVGFSPDCSTRVVGTSNGILYAGKRKTKESETTNLSNPWSLGTVGEPQ 365

Query: 258 ----------------------------------LTQKDQLLKNFRHKDALVSMLASKNP 317
                                             LT+ D LLK FRHKDALVS+LAS+NP
Sbjct: 366 RRVLRPSHFRYFHRGQGEKPSEGDYLVMKPKKVKLTEHDNLLKKFRHKDALVSVLASRNP 425

Query: 318 ENVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTRKVLELRT 321
           ENVVAVM+ELVARKKLLKC+TNLDR+ELG L  FLQK+STLPRYS+LLMGLTRKV+ELR+
Sbjct: 426 ENVVAVMEELVARKKLLKCVTNLDREELGSLLGFLQKYSTLPRYSNLLMGLTRKVVELRS 485

[Close]

BLAST of Sed0004423 vs. ExPASy TrEMBL
Match: A0A6J1GNL7 (protein SLOW WALKER 1 OS=Cucurbita moschata OX=3662 GN=LOC111456074 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.7e-121
Identity = 254/405 (62.72%), Postives = 274/405 (67.65%), Query Frame = 0


Query: 18  KLKSKPRIPIRFVQYPVLDKLHLVSGGDDAM----------PILDFLGHKDYVRCGACSP 77
           KL+S  R P+ FVQYPVLDKLHLVSGGDDA+          P+LDFLGHKDYVR GACSP
Sbjct: 126 KLRSHSR-PVHFVQYPVLDKLHLVSGGDDAVVKYWDVASQTPLLDFLGHKDYVRSGACSP 185

Query: 78  ASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGKLVEDVIFLPS---------------- 137
           +S DMF+TGSYDH VKLWDARTN KSVLEVNHGK VEDVIFLPS                
Sbjct: 186 SSMDMFVTGSYDHTVKLWDARTNSKSVLEVNHGKPVEDVIFLPSGGLVATAGGNSVKIWD 245

Query: 138 --VGGKMVCSMESHNKTVTSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKV 197
              GGKMV SMESHNKTVTSLCVGK  KDS E+SD  QFRILSVALDGYM+VFDYSKMKV
Sbjct: 246 VIGGGKMVGSMESHNKTVTSLCVGKLGKDSGEESD--QFRILSVALDGYMKVFDYSKMKV 305

Query: 198 THSMRFPTPLMSVGVSPDC----------------------------------------- 257
           THSMRFPTPLMSVG SPDC                                         
Sbjct: 306 THSMRFPTPLMSVGFSPDCSSRVIGTSNGILYAGKRKTKGITASNLSNPWSLGSVGEPQR 365

Query: 258 ---------------------------------LTQKDQLLKNFRHKDALVSMLASKNPE 317
                                            LT+ D+LLK FRHKDALVS+LASKNPE
Sbjct: 366 RALRPSHFRYFHRGQGEKPTEGDYLVMKPKKVKLTEHDKLLKKFRHKDALVSVLASKNPE 425

Query: 318 NVVAVMDELVARKKLLKCITNLDRKELGLLFVFLQKHSTLPRYSSLLMGLTRKVLELRTE 321
           NVVAVM+ELVARKKLLKC++NL+ +ELGLL VFLQKHSTLPRYSSLLMGLTRKVLELR E
Sbjct: 426 NVVAVMEELVARKKLLKCVSNLNTEELGLLLVFLQKHSTLPRYSSLLMGLTRKVLELRAE 485

[Close]

BLAST of Sed0004423 vs. TAIR 10
Match: AT2G47990.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 330.5 bits (846), Expect = 1.5e-90
Identity = 190/401 (47.38%), Postives = 236/401 (58.85%), Query Frame = 0


Query: 26  PIRFVQYPVLDKLHLVSGGDD----------AMPILDFLGHKDYVRCGACSPASTDMFIT 85
           P RFV+YPV DKLHLVSGGDD          A  I D LGHKDYVRCG CSP +  M +T
Sbjct: 137 PARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVT 196

Query: 86  GSYDHNVKLWDARTNLKS-VLEVNHGKLVEDVIFLPS------------------VGGKM 145
           GSYDH VK+WDAR +  + + E+NHG  VEDV++LPS                   GGKM
Sbjct: 197 GSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVYLPSGGLIATAGGNSVKVWDLIGGGKM 256

Query: 146 VCSMESHNKTVTSLCVGKTSKDSEEDSDSNQFRILSVALDGYMQVFDYSKMKVTHSMRFP 205
           VCSMESHNKTVTSL V +         +S + R++SVALDGYM+VFDY + KVT+SMRFP
Sbjct: 257 VCSMESHNKTVTSLRVAR--------MESAESRLVSVALDGYMKVFDYGRAKVTYSMRFP 316

Query: 206 TPLMSVGVSPD------------------------------------------------- 265
            PLMS+G+SPD                                                 
Sbjct: 317 APLMSLGLSPDGSTRVIGGSNGMVFAGKKKVRDVVGGQKKSLNLWSLISDVDESRRRALR 376

Query: 266 ----------------------------CLTQKDQLLKNFRHKDALVSMLASKNPENVVA 321
                                        LT+ D+LLK FRHK+ALVS+L  K P NVVA
Sbjct: 377 PTYFRYFQRGQSEKPSKDDYLVKEKKGLKLTRHDKLLKKFRHKEALVSVLEEKKPANVVA 436

[Close]

BLAST of Sed0004423 vs. TAIR 10
Match: AT1G19750.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 2.2e-04
Identity = 18/36 (50.00%), Postives = 22/36 (61.11%), Query Frame = 0


Query: 55  GHKDYVRCGACSPASTDMFITGSYDHNVKLWDARTN 91
           GHK  +      P  T MFITGS+DH VK+WD  T+
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTS 136

[Close]

BLAST of Sed0004423 vs. TAIR 10
Match: AT5G02430.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.8e-04
Identity = 24/74 (32.43%), Postives = 35/74 (47.30%), Query Frame = 0


Query: 51  LDFLGHKDYVRCGACSPASTDMFITGSYDHNVKLWDARTNLKSVLEVNHGK-LVEDVIFL 110
           L    H DYV C   +P   D FI+GS D  +++W+     + V+E N  K +V  V + 
Sbjct: 553 LKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISN--RQVVEWNDLKEMVTAVCYT 612

Query: 111 PSVGGKMVCSMESH 124
           P      V S+  H
Sbjct: 613 PDGQAAFVGSINGH 624

[Close]

BLAST of Sed0004423 vs. TAIR 10
Match: AT5G42010.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.8e-04
Identity = 24/84 (28.57%), Postives = 42/84 (50.00%), Query Frame = 0


Query: 37  KLHLVSGGDDAMPILDFLGHKDYVRCGACSPASTDMFITGSYDHNVKLWDARTNLKSVLE 96
           +L  V   D+ + +     HK +V C A +P   + FI+GS D  V++WD  +  + V  
Sbjct: 387 RLWRVGSSDECIRV---FSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDV-SQFRVVDY 446

Query: 97  VNHGKLVEDVIFLPSVGGKMVCSM 121
            +  ++V  + + P   G +V SM
Sbjct: 447 TDIRQIVTALCYRPDGKGAVVGSM 466

The following BLAST results are available for this feature:

BLAST of Sed0004423 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150272.1	9.7e-124	62.72	protein SLOW WALKER 1 [Momordica charantia] >XP_022150273.1 protein SLOW WALKER ...	[more]
XP_008451418.1	8.2e-123	63.05	PREDICTED: protein SLOW WALKER 1 [Cucumis melo]	[more]
XP_038896112.1	4.1e-122	62.71	protein SLOW WALKER 1 [Benincasa hispida] >XP_038896113.1 protein SLOW WALKER 1 ...	[more]
XP_023548467.1	4.1e-122	62.96	protein SLOW WALKER 1-like [Cucurbita pepo subsp. pepo] >XP_023548468.1 protein ...	[more]
KAA0057548.1	5.3e-122	62.81	protein SLOW WALKER 1 [Cucumis melo var. makuwa] >TYK18269.1 protein SLOW WALKER...	[more]

BLAST of Sed0004423 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82266	2.1e-89	47.38	Protein SLOW WALKER 1 OS=Arabidopsis thaliana OX=3702 GN=SWA1 PE=2 SV=1	[more]
Q7ZXZ2	6.3e-33	28.16	U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus laevis OX=8355 G...	[more]
Q5F3D7	1.8e-32	27.03	U3 small nucleolar RNA-associated protein 15 homolog OS=Gallus gallus OX=9031 GN...	[more]
Q5XGE2	7.0e-32	26.84	U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus tropicalis OX=83...	[more]
A7MB12	2.2e-30	29.19	U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus OX=9913 GN=UT...	[more]

BLAST of Sed0004423 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D905	4.7e-124	62.72	protein SLOW WALKER 1 OS=Momordica charantia OX=3673 GN=LOC111018477 PE=4 SV=1	[more]
A0A1S3BS86	4.0e-123	63.05	protein SLOW WALKER 1 OS=Cucumis melo OX=3656 GN=LOC103492718 PE=4 SV=1	[more]
A0A5A7UR01	2.6e-122	62.81	Protein SLOW WALKER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A0A0K5R9	5.8e-122	62.81	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G...	[more]
A0A6J1GNL7	1.7e-121	62.72	protein SLOW WALKER 1 OS=Cucurbita moschata OX=3662 GN=LOC111456074 PE=4 SV=1	[more]

BLAST of Sed0004423 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47990.1	1.5e-90	47.38	transducin family protein / WD-40 repeat family protein	[more]
AT1G19750.1	2.2e-04	50.00	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G02430.1	2.8e-04	32.43	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G42010.1	4.8e-04	28.57	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 46..86 e-value: 2.5E-6 score: 37.1 coord: 113..163 e-value: 0.82 score: 17.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 53..89 score: 10.909469
IPR018983	U3 small nucleolar RNA-associated protein 15, C-terminal	PFAM	PF09384	UTP15_C	coord: 189..314 e-value: 9.8E-29 score: 99.9
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 33..289 e-value: 3.7E-17 score: 64.6
None	No IPR available	PANTHER	PTHR19924	UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBER	coord: 190..317 coord: 22..188
None	No IPR available	PANTHER	PTHR19924:SF26	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 HOMOLOG	coord: 190..317 coord: 22..188
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 53..89 score: 9.151057
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 36..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004423.1	Sed0004423.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005515	protein binding