Sed0004327 (gene) Chayote v1

Overview


Name	Sed0004327
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Thioredoxin
Location	LG07: 40929293 .. 40930749 (-)
RNA-Seq Expression	Sed0004327
Synteny	Sed0004327

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTTCTTTGCTTTAAAGCCCTTTAACTACCTCGTTTTTGTGCTTTGCCCCCCTTTTTTTTGTGTGTGTAAAAGATTGTAATTAATGGCAGATATGGGAAAAGTGGTTTCTTGCCGCACTGTTGGTTCATGGAAGCAGCAACTTTTAAACGCCAAACATCACAACAAATTGGTAACTTTTATGAACATTTTGCAGCTTCTCATTGTTCGTTTTATTTACTTTTTACGTGTGCGGCGGCATTATTTGGTGTAACAAAATATCTTTTCCTTTTTCTTTTTAATATTGTTCAAACAAAAAATTTGTGGTACCATCAGACATATACAATAAAGAGGGTTAAGTATATTCTCGTATTATCATTGTTGTGTGTTTGTGGACAGGTGGTGGTGAACTTTACGGCGACATGGTGCCGCCCGTGTCGAGCCATGGCTCCTATTCTCGACGAGCTTGCCAATAAGATGAGCCATAATGTTATATTCTTGAAAGTTGATGTCGACGAACTCATGGTAAATTTATCCGAAATTCAAAAATATGATTAAGTTTTCAAAAACTAACCCATTCAATTATTATTTGTGTGTGTTTTTTTGGCTAACTTGAGTTTCATTTCTCCTTATTTACCTACCATATTTTTGTCTCCCTTAAAGAAACATTAAAGTCATAGTCAAATTCCAAAAATAAAAAATCAATTTTTGAAATATTACATTTTTCTCTTTTTTTTTTCTTTTCAAAAAAATGTTTAGTTTAAAAAAATTAATAATAAAATGTAAAAAATGCATAACAAAACAAGAAAAAAAAAATTAGTACGAGGAAAGGAGACCAACAAACCCTACACAGAGGGCATGCTCTCGAATAATATTAACCAACCGTGTTACCGATCTATTCGGTGAAACAAGAAGATTTATACGTGAAAATTATGTTTATAAACTCTTTTTAGTATAATTTTTTTAAAATAATAAAATAACTAAGATGTTACATGTTTGAAAAACTGTATACTATTGTGGAATTTAAAACGAGTATAATGAATTAATTATTATTGTTATTGATTTGTATAGAGTGTTGCGAACGAGTCCGGAGTGGCAGCACTTCCTTCATTTCAATTCATCAAGAATGGAAAGTTGGTGGACAAGTTCGTGGGGGCAAAGAAAGACCTATTGCACAACATTGTATCTAAATATGTCCCATGATCGAATATACATATAATATGTTGTAAATGTATCTAAGTTACGTTTAAGGAACATGAATTGTGATCAATAAAATCTGTCTTCATTACCATTTTTGTCCACCAACCCAACCCTATCTAATGATTGATAAATCTTTTGATATTTGTAATACTTCAATCACTTCTATGTTTTATTTCTTTCATGACTACATTATACTTCTAATGTAATAATGTATGTCTTTAAAACATAATATAATGTTTCTGTTTAGGATTGTCTGACGTAATAAATTTATAAAATAG

mRNA sequence

CAATTTCTTTGCTTTAAAGCCCTTTAACTACCTCGTTTTTGTGCTTTGCCCCCCTTTTTTTTGTGTGTGTAAAAGATTGTAATTAATGGCAGATATGGGAAAAGTGGTTTCTTGCCGCACTGTTGGTTCATGGAAGCAGCAACTTTTAAACGCCAAACATCACAACAAATTGGTGGTGGTGAACTTTACGGCGACATGGTGCCGCCCGTGTCGAGCCATGGCTCCTATTCTCGACGAGCTTGCCAATAAGATGAGCCATAATGTTATATTCTTGAAAGTTGATGTCGACGAACTCATGAGTGTTGCGAACGAGTCCGGAGTGGCAGCACTTCCTTCATTTCAATTCATCAAGAATGGAAAGTTGGTGGACAAGTTCGTGGGGGCAAAGAAAGACCTATTGCACAACATTGTATCTAAATATGTCCCATGATCGAATATACATATAATATGTTGTAAATGTATCTAAGTTACGTTTAAGGAACATGAATTGTGATCAATAAAATCTGTCTTCATTACCATTTTTGTCCACCAACCCAACCCTATCTAATGATTGATAAATCTTTTGATATTTGTAATACTTCAATCACTTCTATGTTTTATTTCTTTCATGACTACATTATACTTCTAATGTAATAATGTATGTCTTTAAAACATAATATAATGTTTCTGTTTAGGATTGTCTGACGTAATAAATTTATAAAATAG

Coding sequence (CDS)

ATGGCAGATATGGGAAAAGTGGTTTCTTGCCGCACTGTTGGTTCATGGAAGCAGCAACTTTTAAACGCCAAACATCACAACAAATTGGTGGTGGTGAACTTTACGGCGACATGGTGCCGCCCGTGTCGAGCCATGGCTCCTATTCTCGACGAGCTTGCCAATAAGATGAGCCATAATGTTATATTCTTGAAAGTTGATGTCGACGAACTCATGAGTGTTGCGAACGAGTCCGGAGTGGCAGCACTTCCTTCATTTCAATTCATCAAGAATGGAAAGTTGGTGGACAAGTTCGTGGGGGCAAAGAAAGACCTATTGCACAACATTGTATCTAAATATGTCCCATGA

Protein sequence

MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKYVP

Homology

[Close]

BLAST of Sed0004327 vs. NCBI nr
Match: KAA0051550.1 (thioredoxin H1-like [Cucumis melo var. makuwa])

HSP 1 Score: 193.7 bits (491), Expect = 8.4e-46
Identity = 93/113 (82.30%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           M DMGKVVSC TVGSWKQQLL AK +NKLVVVNFTATWC PCR MAP+L +LANKMS+NV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKYV 114
           I LKVDVDELMSVANE GV ALPSFQF KNGKLVDKFVGA+KD+LH  VSK+V
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHV 113

[Close]

BLAST of Sed0004327 vs. NCBI nr
Match: XP_008464900.1 (PREDICTED: thioredoxin H1-like [Cucumis melo] >TYK21273.1 thioredoxin H1-like [Cucumis melo var. makuwa])

HSP 1 Score: 193.7 bits (491), Expect = 8.4e-46
Identity = 93/113 (82.30%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           M DMGKVVSC TVGSWKQQLL AK +NKLVVVNFTATWC PCR MAP+L +LANKMS+NV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKYV 114
           I LKVDVDELMSVANE GV ALPSFQF KNGKLVDKFVGA+KD+LH  VSK+V
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHV 113

[Close]

BLAST of Sed0004327 vs. NCBI nr
Match: XP_022996723.1 (thioredoxin H-type-like [Cucurbita maxima])

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45
Identity = 93/112 (83.04%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           MADMGKVVSC TVGSWKQQ L AK HNKL+VVNFTATWCRPCRAMAP+LDELA K  +NV
Sbjct: 1   MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPVLDELAKKSCNNV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKY 113
            FLKVDVD+LMSVANE GV ALPSFQF KNG+LVDKFVGAKKD+L NIVSK+
Sbjct: 61  TFLKVDVDKLMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNIVSKH 112

[Close]

BLAST of Sed0004327 vs. NCBI nr
Match: XP_022942758.1 (thioredoxin H1-like [Cucurbita moschata] >KAG7030692.1 hypothetical protein SDJN02_04729, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192.6 bits (488), Expect = 1.9e-45
Identity = 93/112 (83.04%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           MADMGKVVSC TVGSWKQQ L AK HNKL+VVNFTATWCRPCRAMAP+LD+LA K  +NV
Sbjct: 1   MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKY 113
            FLKVDVDELMSVANE GV ALPSFQF KNG+LVDKFVGAKKDLL N VSK+
Sbjct: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDLLLNTVSKH 112

[Close]

BLAST of Sed0004327 vs. NCBI nr
Match: KAG6600023.1 (Thioredoxin H4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.8 bits (486), Expect = 3.2e-45
Identity = 92/112 (82.14%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           MADMGKVVSC TVGSWKQQ L AK HNKL+VVNFTATWCRPCRAMAP+LD+LA K  +NV
Sbjct: 1   MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKY 113
           +FLKVDVDELMSVANE GV ALPSFQF KNG+LVDKF GAKKDLL N VSK+
Sbjct: 61  MFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFAGAKKDLLLNTVSKH 112

[Close]

BLAST of Sed0004327 vs. ExPASy Swiss-Prot
Match: Q39362 (Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-28
Identity = 56/111 (50.45%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 2   ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVI 61
           A+ G+V+ C  +  W  QL  AK  NKL+V++FTA+WC PCR +AP+  +LA K   + I
Sbjct: 3   AEEGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAI 62

Query: 62  FLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKY 113
           F KVDVDEL +VA E GV A+P+F  IK+G +VDK VGA+K+ LH  ++K+
Sbjct: 63  FFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKH 113

[Close]

BLAST of Sed0004327 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-28
Identity = 59/111 (53.15%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 2   ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVI 61
           A+ G+V+ C T   W  QL  AK  NKL+V++FTA+WC PCR +API ++LA K   + I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKY 113
           F KVDVDEL SVA E GV A+P+F FIK G++VDK VGA K+ L   + K+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Sed0004327 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.3e-28
Identity = 56/112 (50.00%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 2   ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVI 61
           ++ G+V++C TV +W +QL  A     LVVV+FTA+WC PCR +AP   +LA K+  NV+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 62  FLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKYV 114
           FLKVD DEL SVA++  + A+P+F F+K GK++DK VGAKKD L + ++K++
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHL 113

[Close]

BLAST of Sed0004327 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-27
Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 2   ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVI 61
           A+ G+V+ C TV +W +QL        L+VV+FTA+WC PCR +AP L ELA K+  NV 
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLP-NVT 62

Query: 62  FLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKYV 114
           FLKVDVDEL +VA+E  V ++P+F F+K GK++DK VGAKKD L   ++K++
Sbjct: 63  FLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHM 113

[Close]

BLAST of Sed0004327 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.7e-26
Identity = 57/113 (50.44%), Postives = 76/113 (67.26%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           MA+ G+V+   TV +W + L       KL+VV+FTA+WC PC+ +A    ELA KM   V
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMP-TV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKYV 114
            FLKVDVDEL SVA +  V A+P+F F+K GK+VDK VGAKKD L   ++K++
Sbjct: 61  TFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHI 112

[Close]

BLAST of Sed0004327 vs. ExPASy TrEMBL
Match: A0A5A7U8S0 (Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00820 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.1e-46
Identity = 93/113 (82.30%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           M DMGKVVSC TVGSWKQQLL AK +NKLVVVNFTATWC PCR MAP+L +LANKMS+NV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKYV 114
           I LKVDVDELMSVANE GV ALPSFQF KNGKLVDKFVGA+KD+LH  VSK+V
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHV 113

[Close]

BLAST of Sed0004327 vs. ExPASy TrEMBL
Match: A0A5D3DCH1 (Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00270 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.1e-46
Identity = 93/113 (82.30%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           M DMGKVVSC TVGSWKQQLL AK +NKLVVVNFTATWC PCR MAP+L +LANKMS+NV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKYV 114
           I LKVDVDELMSVANE GV ALPSFQF KNGKLVDKFVGA+KD+LH  VSK+V
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHV 113

[Close]

BLAST of Sed0004327 vs. ExPASy TrEMBL
Match: A0A1S3CMM6 (thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103502660 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.1e-46
Identity = 93/113 (82.30%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           M DMGKVVSC TVGSWKQQLL AK +NKLVVVNFTATWC PCR MAP+L +LANKMS+NV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKYV 114
           I LKVDVDELMSVANE GV ALPSFQF KNGKLVDKFVGA+KD+LH  VSK+V
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHV 113

[Close]

BLAST of Sed0004327 vs. ExPASy TrEMBL
Match: A0A6J1KBU8 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111491878 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.3e-46
Identity = 93/112 (83.04%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           MADMGKVVSC TVGSWKQQ L AK HNKL+VVNFTATWCRPCRAMAP+LDELA K  +NV
Sbjct: 1   MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPVLDELAKKSCNNV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKY 113
            FLKVDVD+LMSVANE GV ALPSFQF KNG+LVDKFVGAKKD+L NIVSK+
Sbjct: 61  TFLKVDVDKLMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNIVSKH 112

[Close]

BLAST of Sed0004327 vs. ExPASy TrEMBL
Match: A0A6J1FVM4 (thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111447699 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.1e-46
Identity = 93/112 (83.04%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           MADMGKVVSC TVGSWKQQ L AK HNKL+VVNFTATWCRPCRAMAP+LD+LA K  +NV
Sbjct: 1   MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKY 113
            FLKVDVDELMSVANE GV ALPSFQF KNG+LVDKFVGAKKDLL N VSK+
Sbjct: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDLLLNTVSKH 112

[Close]

BLAST of Sed0004327 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 4.5e-29
Identity = 59/111 (53.15%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 2   ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVI 61
           A+ G+V+ C T   W  QL  AK  NKL+V++FTA+WC PCR +API ++LA K   + I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKY 113
           F KVDVDEL SVA E GV A+P+F FIK G++VDK VGA K+ L   + K+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Sed0004327 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 124.4 bits (311), Expect = 5.9e-29
Identity = 56/112 (50.00%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 2   ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVI 61
           ++ G+V++C TV +W +QL  A     LVVV+FTA+WC PCR +AP   +LA K+  NV+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 62  FLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKYV 114
           FLKVD DEL SVA++  + A+P+F F+K GK++DK VGAKKD L + ++K++
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHL 113

[Close]

BLAST of Sed0004327 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-26
Identity = 50/112 (44.64%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           MA  G+V++C T+  W +++ +A    KL+V++FTA+WC PCR +AP+  E+A K + NV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFT-NV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSKY 113
           +F K+DVDEL +VA E  V A+P+F F+K G ++D+ VGA KD ++  + K+
Sbjct: 61  VFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Sed0004327 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-23
Identity = 50/103 (48.54%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 1   MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNV 60
           MA  G+V++C TV  W ++L  A    KL+V++FTATWC PCR +AP+  +LA K   +V
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKK-HLDV 60

Query: 61  IFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKD 104
           +F KVDVDEL +VA E  V A+P+F F+K G++ +  VGA K+
Sbjct: 61  VFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKE 102

[Close]

BLAST of Sed0004327 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 95.5 bits (236), Expect = 2.9e-20
Identity = 45/110 (40.91%), Postives = 70/110 (63.64%), Query Frame = 0


Query: 2   ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVI 61
           ++  +V+   +   W+      K  NKL+VV+F+A+WC PCR + P +  +A+K  ++V 
Sbjct: 22  SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKF-NDVD 81

Query: 62  FLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVSK 112
           F+K+DVDEL  VA E  V A+P+F  +K GK +++ +GAKKD L   VSK
Sbjct: 82  FVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

The following BLAST results are available for this feature:

BLAST of Sed0004327 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051550.1	8.4e-46	82.30	thioredoxin H1-like [Cucumis melo var. makuwa]	[more]
XP_008464900.1	8.4e-46	82.30	PREDICTED: thioredoxin H1-like [Cucumis melo] >TYK21273.1 thioredoxin H1-like [C...	[more]
XP_022996723.1	1.1e-45	83.04	thioredoxin H-type-like [Cucurbita maxima]	[more]
XP_022942758.1	1.9e-45	83.04	thioredoxin H1-like [Cucurbita moschata] >KAG7030692.1 hypothetical protein SDJN...	[more]
KAG6600023.1	3.2e-45	82.14	Thioredoxin H4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0004327 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39362	2.8e-28	50.45	Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1	[more]
Q39239	6.3e-28	53.15	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
P29448	8.3e-28	50.00	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q43636	1.1e-27	51.79	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
Q07090	7.7e-26	50.44	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]

BLAST of Sed0004327 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8S0	4.1e-46	82.30	Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G...	[more]
A0A5D3DCH1	4.1e-46	82.30	Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G...	[more]
A0A1S3CMM6	4.1e-46	82.30	thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103502660 PE=4 SV=1	[more]
A0A6J1KBU8	5.3e-46	83.04	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111491878 PE=4 SV=1	[more]
A0A6J1FVM4	9.1e-46	83.04	thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111447699 PE=4 SV=1	[more]

BLAST of Sed0004327 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19730.1	4.5e-29	53.15	Thioredoxin superfamily protein	[more]
AT3G51030.1	5.9e-29	50.00	thioredoxin H-type 1	[more]
AT1G45145.1	2.7e-26	44.64	thioredoxin H-type 5	[more]
AT5G42980.1	2.2e-23	48.54	thioredoxin 3	[more]
AT5G39950.1	2.9e-20	40.91	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 38..47 score: 56.94 coord: 78..89 score: 29.81 coord: 30..38 score: 53.52
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..114 e-value: 1.4E-34 score: 120.7
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..112
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..112
None	No IPR available	CDD	cd02947	TRX_family	coord: 18..100 e-value: 7.41997E-32 score: 105.718
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 12..108 e-value: 1.4E-26 score: 92.4
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..114 score: 11.700987
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004327.1	Sed0004327.1	mRNA