Sed0004181 (gene) Chayote v1

Overview


Name	Sed0004181
Type	gene
Organism	Sechium edule (Chayote v1)
Description	X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like
Location	LG01: 10371385 .. 10372044 (+)
RNA-Seq Expression	Sed0004181
Synteny	Sed0004181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAAAACCCAAAAGCCATAAAGTTGGATTCAAATGAAAGTTTGAATCTTGATGGTACAATTTCAAGTTGGAGTAGCAATAGCAGCAAAGTTGAGAGCTTGAAAAAGATGGTGAAGTTTGTTTTTTCAGTTTGTGTTTTATCTTTTTTTTTAGCCATTTTCTCTCAGTTTCCTCATTCTTTCAATTTCAACCATGGCATGGAGAGAAAGTACATGTTTTTAATTTGTAATGGAATCCTCTTTCTTCTAGCCACTTGTTCTGTAATTGAAGATTCTTCTTCTTTTGAGCCTTGTGATTATTCATTTTCCCACTCTGATCATGATCATGATGATCATCATCAATTTGAACCTCTTGTGGCTGCCATTGAAGAGCAAAATCAAGAAATGGAAACAGAAGAAAAAGAAGTTGAAGAAATTATTAATGGAGTTCAATTAGACGAAGACGAAGACGAAAACGAAGACGAAGATGAGGATGAAGATGAAAATGAAGGGTGTTTTGCAGATGAGATTGAAGAAGATGAAGAAGAAGGAAAAGGGAGGGAATTGGAGATGGTGGTGAGTACAGAAGAATTGAATAAGAAAATAGAGGAGTTTATTAGGAAAATGAAAGAAGAAATGAGGATTGAAGCAGCTCAAACTCAGCTCATTGCAGTGTAA

mRNA sequence

ATGGATCAAAACCCAAAAGCCATAAAGTTGGATTCAAATGAAAGTTTGAATCTTGATGGTACAATTTCAAGTTGGAGTAGCAATAGCAGCAAAGTTGAGAGCTTGAAAAAGATGGTGAAGTTTGTTTTTTCAGTTTGTGTTTTATCTTTTTTTTTAGCCATTTTCTCTCAGTTTCCTCATTCTTTCAATTTCAACCATGGCATGGAGAGAAAGTACATGTTTTTAATTTGTAATGGAATCCTCTTTCTTCTAGCCACTTGTTCTGTAATTGAAGATTCTTCTTCTTTTGAGCCTTGTGATTATTCATTTTCCCACTCTGATCATGATCATGATGATCATCATCAATTTGAACCTCTTGTGGCTGCCATTGAAGAGCAAAATCAAGAAATGGAAACAGAAGAAAAAGAAGTTGAAGAAATTATTAATGGAGTTCAATTAGACGAAGACGAAGACGAAAACGAAGACGAAGATGAGGATGAAGATGAAAATGAAGGGTGTTTTGCAGATGAGATTGAAGAAGATGAAGAAGAAGGAAAAGGGAGGGAATTGGAGATGGTGGTGAGTACAGAAGAATTGAATAAGAAAATAGAGGAGTTTATTAGGAAAATGAAAGAAGAAATGAGGATTGAAGCAGCTCAAACTCAGCTCATTGCAGTGTAA

Coding sequence (CDS)

ATGGATCAAAACCCAAAAGCCATAAAGTTGGATTCAAATGAAAGTTTGAATCTTGATGGTACAATTTCAAGTTGGAGTAGCAATAGCAGCAAAGTTGAGAGCTTGAAAAAGATGGTGAAGTTTGTTTTTTCAGTTTGTGTTTTATCTTTTTTTTTAGCCATTTTCTCTCAGTTTCCTCATTCTTTCAATTTCAACCATGGCATGGAGAGAAAGTACATGTTTTTAATTTGTAATGGAATCCTCTTTCTTCTAGCCACTTGTTCTGTAATTGAAGATTCTTCTTCTTTTGAGCCTTGTGATTATTCATTTTCCCACTCTGATCATGATCATGATGATCATCATCAATTTGAACCTCTTGTGGCTGCCATTGAAGAGCAAAATCAAGAAATGGAAACAGAAGAAAAAGAAGTTGAAGAAATTATTAATGGAGTTCAATTAGACGAAGACGAAGACGAAAACGAAGACGAAGATGAGGATGAAGATGAAAATGAAGGGTGTTTTGCAGATGAGATTGAAGAAGATGAAGAAGAAGGAAAAGGGAGGGAATTGGAGATGGTGGTGAGTACAGAAGAATTGAATAAGAAAATAGAGGAGTTTATTAGGAAAATGAAAGAAGAAATGAGGATTGAAGCAGCTCAAACTCAGCTCATTGCAGTGTAA

Protein sequence

MDQNPKAIKLDSNESLNLDGTISSWSSNSSKVESLKKMVKFVFSVCVLSFFLAIFSQFPHSFNFNHGMERKYMFLICNGILFLLATCSVIEDSSSFEPCDYSFSHSDHDHDDHHQFEPLVAAIEEQNQEMETEEKEVEEIINGVQLDEDEDENEDEDEDEDENEGCFADEIEEDEEEGKGRELEMVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIAV

Homology

[Close]

BLAST of Sed0004181 vs. NCBI nr
Match: XP_038877796.1 (glutamic acid-rich protein-like [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-42
Identity = 137/242 (56.61%), Postives = 166/242 (68.60%), Query Frame = 0


Query: 1   MDQNPKAIKLDSNESLNL---DGTISSWSSN---SSKVESLKKMVKFVFSVCVLSFFLAI 60
           M++ P+A  LDSN+SLNL   D  I + S +    SKVE L +MVKF     VL+ F + 
Sbjct: 1   MEEYPEARNLDSNQSLNLYDDDDDIRTSSKDYNCCSKVEMLIRMVKFTVFSLVLALFFSF 60

Query: 61  FSQFPHSFN----------FNHGMERKYMFLICNGILFLLATCSVIED----SSSFEPCD 120
           FS FPHSF+           NH MERKYMFLICNGILFLLAT SVIED    SSSF  C 
Sbjct: 61  FSLFPHSFSVYFSTFMFSLLNHAMERKYMFLICNGILFLLATSSVIEDSSSSSSSFGTCS 120

Query: 121 YSFSHSDHDHDDHHQFE-PLVAAIEEQNQEMETEEKEVEEIINGVQLDEDEDENEDEDED 180
           ++ SHSDH H  HHQ E  LVAAI+  + E   ++ + EE     + +E+E   ++ +E+
Sbjct: 121 FN-SHSDHHH--HHQLEHDLVAAIDGSDSEESVQQNQEEE-----EEEEEEIHRDELEEE 180

Query: 181 EDENEGCFADEIEED--EEEGKGRELEMVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLI 220
            +E+EGCF DE+E+D  EEEGK RELE+VVSTEELNKKIEEFIRKMKEEMRIEAAQTQLI
Sbjct: 181 MEEDEGCFTDEVEDDDEEEEGKRRELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLI 234

[Close]

BLAST of Sed0004181 vs. NCBI nr
Match: XP_022927104.1 (X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like [Cucurbita moschata])

HSP 1 Score: 178.3 bits (451), Expect = 7.1e-41
Identity = 139/250 (55.60%), Postives = 166/250 (66.40%), Query Frame = 0


Query: 1   MDQNPKAIKLDSNESLNLDGTISSWSSNSSKVESLKKMVKFVFSVCVLSFFLAI----FS 60
           M+   +AI +DS ESL+LD T    SS ++ VE LK+MVKF+ S+CV S  LA+    FS
Sbjct: 1   MENRVEAINMDSYESLDLDRT----SSTNNNVERLKRMVKFIVSICVFSLVLALFFSFFS 60

Query: 61  QFPHSFN----------FNHGMERKYMFLICNGILFLLATCSVIED---SSSFEPCDYSF 120
            FPHSF            NHGMERK+MFLICNGILFLLAT SV++D   SSS      SF
Sbjct: 61  LFPHSFTVYFSTFLFSLLNHGMERKFMFLICNGILFLLATSSVLQDSSPSSSSSSSSSSF 120

Query: 121 SHSDHDHDDHH-QFE-PLVA-------AIEEQNQEMETEEKEVEEIINGVQLDEDEDENE 180
            +S   H  HH QFE  LVA       + E + QE E  E E E+       DE EDE+E
Sbjct: 121 GYSSFSHSVHHDQFEHDLVADASDGYDSDESEEQEHEEHEDEHEDEHEDEHEDEHEDEHE 180

Query: 181 D---EDEDEDENEGCFADEI-EEDEEEGKGRELEMVVSTEELNKKIEEFIRKMKEEMRIE 220
           D   E E+++E+EGCF +E+ EE+EEEGK R+LE+VVSTEELNKKIEEFIRKMKEEMRIE
Sbjct: 181 DEHEEQEEDEEDEGCFTEEVEEEEEEEGKRRDLEVVVSTEELNKKIEEFIRKMKEEMRIE 240

[Close]

BLAST of Sed0004181 vs. NCBI nr
Match: KAG7019366.1 (hypothetical protein SDJN02_18326, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-40
Identity = 140/250 (56.00%), Postives = 167/250 (66.80%), Query Frame = 0


Query: 1   MDQNPKAIKLDSNESLNLDGTISSWSSNSSKVESLKKMVKFVFSVCVLSFFLAI----FS 60
           M++  +AI +DS ESL+LD T    SS S+ VE LK+MVKF+ S+CV S  LA+    FS
Sbjct: 1   MEKRVEAINMDSYESLDLDRT----SSTSNNVERLKRMVKFIVSICVFSLVLALFFSFFS 60

Query: 61  QFPHSFN----------FNHGMERKYMFLICNGILFLLATCSVIED---------SSSFE 120
            FPHSF            NHGMERK+MFLICNGILFLLAT SV++D         SSSF 
Sbjct: 61  LFPHSFTVYFSTFLFSLLNHGMERKFMFLICNGILFLLATSSVLQDASPSSSSSSSSSFG 120

Query: 121 PCDYSFSHSDHDHDDHHQFE-PLVAAIEEQNQEMETEEKEVEEIINGVQLDEDEDENEDE 180
            C  SFSHS H    H QFE  LVA   +     E+EE+E E+       DE EDE+E++
Sbjct: 121 YC--SFSHSVH----HDQFEHDLVADASDGYDSDESEEQEHED----EHEDEHEDEHEEQ 180

Query: 181 DEDEDENEGCFADEI------EEDEEEGKGRELEMVVSTEELNKKIEEFIRKMKEEMRIE 220
           +EDE E+EGCF +E+      EE+EEEG  R+LE+VVSTEELNKKIEEFIRKMKEEMRIE
Sbjct: 181 EEDE-EDEGCFTEEVEEEEEEEEEEEEGNRRDLEVVVSTEELNKKIEEFIRKMKEEMRIE 235

[Close]

BLAST of Sed0004181 vs. NCBI nr
Match: KAG6583719.1 (hypothetical protein SDJN03_19651, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 175.6 bits (444), Expect = 4.6e-40
Identity = 140/251 (55.78%), Postives = 166/251 (66.14%), Query Frame = 0


Query: 1   MDQNPKAIKLDSNESLNLDGTISSWSSNSSKVESLKKMVKFVFSVCVLSFFLAI----FS 60
           M++  + I +DS ESL+LD T    SS S+ VE LK+MVKF+ S+CV S  LA+    FS
Sbjct: 1   MEKRVEDINMDSYESLDLDRT----SSTSNNVERLKRMVKFIVSICVFSLVLALFFSFFS 60

Query: 61  QFPHSFN----------FNHGMERKYMFLICNGILFLLATCSVIED---------SSSFE 120
            FPHSF            NHGMERK+MFLICNGILFLLAT SV++D         SSSF 
Sbjct: 61  VFPHSFTVYFSTFLFSLLNHGMERKFMFLICNGILFLLATSSVLQDASPSSSSSSSSSFG 120

Query: 121 PCDYSFSHSDHDHDDHHQFE-PLVAAIEEQNQEMETEEKEVEEIINGVQLDEDEDENEDE 180
            C  SFSHS H    H QFE  LVA   +     E+EE+E EE       DE EDE+E++
Sbjct: 121 YC--SFSHSVH----HDQFEHDLVADASDGYDSDESEEQEHEE-----HEDEHEDEHEEQ 180

Query: 181 DEDEDENEGCFADEI-------EEDEEEGKGRELEMVVSTEELNKKIEEFIRKMKEEMRI 220
           +EDE E+EGCF +E+       EE+EEEG  R+LE+VVSTEELNKKIEEFIRKMKEEMRI
Sbjct: 181 EEDE-EDEGCFTEEVEEEEEEEEEEEEEGNRRDLEVVVSTEELNKKIEEFIRKMKEEMRI 235

[Close]

BLAST of Sed0004181 vs. NCBI nr
Match: XP_022142572.1 (nardilysin-like [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 9.6e-30
Identity = 115/238 (48.32%), Postives = 150/238 (63.03%), Query Frame = 0


Query: 1   MDQNPKAIKLDSNESLNLDGTI-SSWSSNSSKVESLKKMVKFVFSVC----VLSFFLAIF 60
           M+++P+A  LDS+ESLNLDG   ++W   SSKV+ LK MVKFV SVC    V++ FL++F
Sbjct: 1   MEEHPQAKDLDSSESLNLDGMCRTNW---SSKVQRLKGMVKFVVSVCVFCLVVALFLSLF 60

Query: 61  SQFPHSFN--------FNHGMERKYMFLICNGILFLLATCSVIEDSSSFEPCDYSFSHSD 120
           S FPHSF          NH ++R YMFL+CNGIL LLAT S ++ S+S            
Sbjct: 61  SLFPHSFTLYFSLFSLLNHALDRNYMFLLCNGILLLLAT-SPLQHSNSI----------- 120

Query: 121 HDHDDHHQFEPLVAAIEEQNQEMETEEKEVEEIINGVQLDEDEDENEDEDEDEDENEGCF 180
                HH +E      EE+ +E+E ++ +   I +             E+ED+   EGCF
Sbjct: 121 ----PHHHYE---LREEEKEEEVEDDDDDTSAIHSADLAAVGPTSPIIEEEDD---EGCF 180

Query: 181 ADEIEEDEEEGKGR---ELEMVVSTEELNKKIEEFIRKMKEEMRIE---AAQTQLIAV 220
            DE+EE+EEE +G+   ELE+VVSTEELNKKIEEFIRKMKEEMRI+   AAQTQL+AV
Sbjct: 181 TDEVEEEEEEEEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV 213

[Close]

BLAST of Sed0004181 vs. ExPASy TrEMBL
Match: A0A6J1EH25 (X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111434039 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.4e-41
Identity = 139/250 (55.60%), Postives = 166/250 (66.40%), Query Frame = 0


Query: 1   MDQNPKAIKLDSNESLNLDGTISSWSSNSSKVESLKKMVKFVFSVCVLSFFLAI----FS 60
           M+   +AI +DS ESL+LD T    SS ++ VE LK+MVKF+ S+CV S  LA+    FS
Sbjct: 1   MENRVEAINMDSYESLDLDRT----SSTNNNVERLKRMVKFIVSICVFSLVLALFFSFFS 60

Query: 61  QFPHSFN----------FNHGMERKYMFLICNGILFLLATCSVIED---SSSFEPCDYSF 120
            FPHSF            NHGMERK+MFLICNGILFLLAT SV++D   SSS      SF
Sbjct: 61  LFPHSFTVYFSTFLFSLLNHGMERKFMFLICNGILFLLATSSVLQDSSPSSSSSSSSSSF 120

Query: 121 SHSDHDHDDHH-QFE-PLVA-------AIEEQNQEMETEEKEVEEIINGVQLDEDEDENE 180
            +S   H  HH QFE  LVA       + E + QE E  E E E+       DE EDE+E
Sbjct: 121 GYSSFSHSVHHDQFEHDLVADASDGYDSDESEEQEHEEHEDEHEDEHEDEHEDEHEDEHE 180

Query: 181 D---EDEDEDENEGCFADEI-EEDEEEGKGRELEMVVSTEELNKKIEEFIRKMKEEMRIE 220
           D   E E+++E+EGCF +E+ EE+EEEGK R+LE+VVSTEELNKKIEEFIRKMKEEMRIE
Sbjct: 181 DEHEEQEEDEEDEGCFTEEVEEEEEEEGKRRDLEVVVSTEELNKKIEEFIRKMKEEMRIE 240

[Close]

BLAST of Sed0004181 vs. ExPASy TrEMBL
Match: A0A6J1CN51 (nardilysin-like OS=Momordica charantia OX=3673 GN=LOC111012652 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.6e-30
Identity = 115/238 (48.32%), Postives = 150/238 (63.03%), Query Frame = 0


Query: 1   MDQNPKAIKLDSNESLNLDGTI-SSWSSNSSKVESLKKMVKFVFSVC----VLSFFLAIF 60
           M+++P+A  LDS+ESLNLDG   ++W   SSKV+ LK MVKFV SVC    V++ FL++F
Sbjct: 1   MEEHPQAKDLDSSESLNLDGMCRTNW---SSKVQRLKGMVKFVVSVCVFCLVVALFLSLF 60

Query: 61  SQFPHSFN--------FNHGMERKYMFLICNGILFLLATCSVIEDSSSFEPCDYSFSHSD 120
           S FPHSF          NH ++R YMFL+CNGIL LLAT S ++ S+S            
Sbjct: 61  SLFPHSFTLYFSLFSLLNHALDRNYMFLLCNGILLLLAT-SPLQHSNSI----------- 120

Query: 121 HDHDDHHQFEPLVAAIEEQNQEMETEEKEVEEIINGVQLDEDEDENEDEDEDEDENEGCF 180
                HH +E      EE+ +E+E ++ +   I +             E+ED+   EGCF
Sbjct: 121 ----PHHHYE---LREEEKEEEVEDDDDDTSAIHSADLAAVGPTSPIIEEEDD---EGCF 180

Query: 181 ADEIEEDEEEGKGR---ELEMVVSTEELNKKIEEFIRKMKEEMRIE---AAQTQLIAV 220
            DE+EE+EEE +G+   ELE+VVSTEELNKKIEEFIRKMKEEMRI+   AAQTQL+AV
Sbjct: 181 TDEVEEEEEEEEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV 213

[Close]

BLAST of Sed0004181 vs. ExPASy TrEMBL
Match: A0A0A0LVQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173190 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.7e-12
Identity = 88/217 (40.55%), Postives = 117/217 (53.92%), Query Frame = 0


Query: 12  SNESLNLDG------TISSWSSNSSKVESLKKMVKFVFSVCVLSFFLAIFSQFPHSFN-- 71
           S  SLNL+       + SS  + SSKVE LK+MVK      +L  F ++FS FPHSF+  
Sbjct: 6   SESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPHSFSVY 65

Query: 72  --------FNHGMERKYMFLICN-GILFLLATCSVIEDSSSFEPCDY-SFSHSDHDHDDH 131
                     H +ERKYMFLICN GILFLLAT SV   SSS    +Y  F HS H+H  H
Sbjct: 66  FSTFLFSILTHAVERKYMFLICNIGILFLLATSSVSSSSSSSSFGNYCPFPHSRHNH-HH 125

Query: 132 HQFEPLVAAIEEQNQEMETEEKEVEEIINGVQLDEDEDENEDEDEDEDENEGCFADEIEE 191
           + FE  V A    ++E +++  + EE     + +E     E  +E+ +E+EGCF DE+EE
Sbjct: 126 NLFEHDVVAAVATDEESDSDHTQEEE----EEKEEGICRGELLEEELEEDEGCFTDEVEE 185

Query: 192 DEEEGKGRELEMVVSTEELNKKIEEFIRKMKEEMRIE 211
           +EEE K          E   ++ +E IR   E  RIE
Sbjct: 186 EEEEEK----------EGKKRRKKERIRDSGEHRRIE 207

[Close]

BLAST of Sed0004181 vs. ExPASy TrEMBL
Match: A0A061GIF6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030414 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.7e-11
Identity = 94/224 (41.96%), Postives = 119/224 (53.12%), Query Frame = 0


Query: 35  LKKMVKFVFSVCVLSFFL---AIFSQFPHSFN----------FNHGMERKYMFLICNGIL 94
           LK+ ++ V SV +LSFFL   + F  FPHSF+          F H +ERKYMFLICNGIL
Sbjct: 23  LKRTLQLVVSVALLSFFLCHSSGFFVFPHSFSVYFSTFLFSFFTHTLERKYMFLICNGIL 82

Query: 95  FLLATCSVIEDSSSFEP---CDYSFSHSD---------HDHDDHHQFEPLVAAIEE---- 154
             LA  SV   SS  E       S S ++            DD     PLVA  EE    
Sbjct: 83  AFLAKSSVPSSSSPSESDLGAQLSTSSTNLTQTNEVVPRYSDDGDNDVPLVAEREEAEDA 142

Query: 155 -QNQEMETEEKEVEEIINGVQLDEDEDENED------EDEDEDENEGCFADEIEEDEEEG 214
            +N+  E  E++  E +  V+  ED++E E       ED +  E E     + ++ +EEG
Sbjct: 143 YENEVEEQGEQDNIEPLGRVEGKEDDEERESEVSVIVEDGEYKEGESGLVMQEDQHKEEG 202

Query: 215 KGREL---EMVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIAV 220
            G  L   E V STE+LN+K EEFIRKMKEE+RIE AQ QLIAV
Sbjct: 203 AGAPLAANEDVPSTEDLNQKFEEFIRKMKEEIRIE-AQQQLIAV 245

[Close]

BLAST of Sed0004181 vs. ExPASy TrEMBL
Match: A0A1R3H2X2 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31921 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.7e-11
Identity = 83/223 (37.22%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 35  LKKMVKFVFSVCVLSFFLA----IFSQFPHSFN----------FNHGMERKYMFLICNGI 94
           LKK ++ V S+ +LS F+      +S FPHSFN          F H +ERKYMFL+CNGI
Sbjct: 24  LKKTLQLVVSMALLSIFVCHSTYYYSWFPHSFNVYLSTFLFSFFTHTLERKYMFLLCNGI 83

Query: 95  LFLLATCSV--------------------IEDSSSFEPCDYSFSHSDHDHDDHHQFEPLV 154
           L  LA  S+                    +E S+SF         S  DH DH+    LV
Sbjct: 84  LAFLAKTSLSHSSLPAGPDFGCQISTPIPMEASASFTDEQGVVRSSKSDHGDHYDVPALV 143

Query: 155 AAIEEQNQ----EMETEEKEVEEIINGVQLDEDEDENEDEDEDEDENEGCFADEIEEDEE 214
              E  ++    E E EE EV  I+        EDE +    D+  +    + + EED  
Sbjct: 144 TEAEVVDEYFGMEKEEEESEVSVIV--------EDEEQQLGGDQSGSNLVISQQQEED-- 203

Query: 215 EGKGRELEMVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIAV 220
              G   E V ST+ELN+K+EEFIRKMKEE+RIEA Q  + A+
Sbjct: 204 ---GIATEEVSSTDELNRKVEEFIRKMKEEIRIEAQQQLITAL 233

[Close]

BLAST of Sed0004181 vs. TAIR 10
Match: AT3G13130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-09
Identity = 69/197 (35.03%), Postives = 108/197 (54.82%), Query Frame = 0


Query: 31  KVESLKKMVKFV-FSVCVLSFFLAIFSQFPHSFNF---NHGMERKYMFLICNGILFLLAT 90
           K E LKK+ KF+  S+ +LS  L     + + F      H +++ YMFL+CNG++ ++A 
Sbjct: 5   KPEFLKKLTKFIAVSMWILS-LLTSHDFYLYRFMIQLVTHAVDKNYMFLLCNGLVVVVAK 64

Query: 91  CSVIEDSSSFEPCDYSFSHSD--HDHDDHHQFEPLVAAIEEQNQEMETEEKEVEEIINGV 150
           CS +  SS  +P +  +S++D   D+ D   +  ++    + +  + TE    EE    V
Sbjct: 65  CSGLVASS--KPIEKIWSNTDKTFDYGDFESYTTILELEYKSDHGIGTESFLAEE----V 124

Query: 151 QLDEDEDENEDED-EDEDENEGCFADEIEEDE---------EEGKGRELEMVVSTEELNK 210
            ++ED    E ED E+ED+++   AD   E+E         EE +G    M  + EE+NK
Sbjct: 125 TVEEDTKHQETEDNEEEDDDDNTLADNDGEEECGLRGGSINEEEEGNVGVMTSTEEEMNK 184

Query: 211 KIEEFIRKMKEEMRIEA 212
           K +EFIRKMKEE+RIEA
Sbjct: 185 KFDEFIRKMKEELRIEA 194

The following BLAST results are available for this feature:

BLAST of Sed0004181 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877796.1	1.7e-42	56.61	glutamic acid-rich protein-like [Benincasa hispida]	[more]
XP_022927104.1	7.1e-41	55.60	X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like [Cucur...	[more]
KAG7019366.1	1.6e-40	56.00	hypothetical protein SDJN02_18326, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6583719.1	4.6e-40	55.78	hypothetical protein SDJN03_19651, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022142572.1	9.6e-30	48.32	nardilysin-like [Momordica charantia]	[more]

BLAST of Sed0004181 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0004181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EH25	3.4e-41	55.60	X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like OS=Cuc...	[more]
A0A6J1CN51	4.6e-30	48.32	nardilysin-like OS=Momordica charantia OX=3673 GN=LOC111012652 PE=4 SV=1	[more]
A0A0A0LVQ2	5.7e-12	40.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173190 PE=4 SV=1	[more]
A0A061GIF6	3.7e-11	41.96	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030414 PE=4 SV=1	[more]
A0A1R3H2X2	3.7e-11	37.22	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31921 PE=4 SV=1	[more]

BLAST of Sed0004181 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13130.1	9.9e-09	35.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..143
None	No IPR available	COILS	Coil	Coil	coord: 189..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..179
None	No IPR available	PANTHER	PTHR34947	TRANSMEMBRANE PROTEIN	coord: 27..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004181.1	Sed0004181.1	mRNA