Sed0004143 (gene) Chayote v1

Overview


Name	Sed0004143
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor MYB20-like
Location	LG03: 5514446 .. 5516211 (+)
RNA-Seq Expression	Sed0004143
Synteny	Sed0004143

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTATAAGAAATTTTAAACAGAGAATTTTGGAAAATGGGAAGGCAACCTTGTTGTGATAAAGTTGGGTTGAAGAAGGGACCATGGACTGCTGAAGAGGACAAAAAACTCATAAACTTCATTCTCACCAATGGCCAATGCTGTTGGAGGGCTCTCCCTAAACTTGCAGGTCTCCTATCCCTCCCTCTTCTCTCTCGATCCTACTAAACGAAACTTCCGATCGATCGACTCGGGAAAGTGTTCATTTTAGAATACTTTGGTGTCTAACTAATTGAACTATGTTTCGGGATTTTGCAGGATTGTTGAGATGTGGGAAGAGTTGTAGATTGAGATGGACGAATTATCTTAGGCCGGATTTGAAGAGAGGGCTCTTGTCCGAATATGAAGAGAAAATGGTCATTGATCTTCATTCTCAGCTGGGCAATAGGTAAATTTTAAATTGAATTAAATTTTGTTTTTTGGTTTGGTTTAATTAAATGGTTAAAAAAAAGAATCTAGAACTGGTCTTCTCTCTCTTAATTGTTTCTTGACAATTGCAGCCTTTTTGAGTCATGCAGTTTAATCATGGAAGCATGTTATCTTTCTTCTAACAATAAGGGGCAATTTTGTTTCTCAAAAAAAAAAAACAATAAGGGGCAATTTGACTTTTTTCCTTTGATTTAAAAAAAAAGAAAAAGAAAAACAACTTTCTAACTACTAAAAAAGTTGGAGTTTTAAGTGGTTTGAGAAACTATCAAATACTACCGTGTTTAATGGAATAATATAAATTTTTATTAGCAAGTATGAGATTTAAATTTATGATTTTCTGATAAATATAAATGAAGAGATTTTTCTCTCAAACACAAGTCTAATGAAAGAGATAAATTAAGCAAGAAATTCTTAATATTTTTCGACCTAAATATTACTTGATAATTGAATCATTTCTTAATATTTAGTTACATAAATCTCCAAGCTTATGTATCCACACAAAGAATTAATTAAAAGCTATTTTACTCTCTTTTCCAACAGGTGGTCAAAAATTGCTTCTCATCTTCCAGGAAGAACTGATAATGAGATAAAAAATCATTGGAACACTCACATAAAGAAGAAGCTAAGAAAAATGGGAATCGACCCTCAAACTCACAAGTCCATTACTCCACCTCCACAAAAAAAAACACTTCCACCACCACCGTCACCGAAAGAACCCAGCAAAGAGGTTGCGATCGATGAAACCGACATGATGGACTTGATCGCGGATGAGTTCTGCACAGAAGAAGTGCCTCTAATTGAAGCACATGAAATTCTAGTCCCTTGTACTTCATCTTCTTCAACAACCTCAACTTCTTATTCTTCATCTAATTCTTCATTTTGTTCAGCCAATTTGCTTCAAGATTTGGCGAATGAGTTTCCTGAATTTGAGTGGCCAAATATTTGTGAAAATGGGATAGTGGAGGATCAACTTTTGGAAGATGATTTTAGTGGTTGGGATTTTGTGGTTAATAATTATGGGGGTACTGGCAGTGGCAACTGCAATGATACTACTCGTGTTGGCTTGGAATTGGATCATTATCAACCTTGGACTTATGGCCTGTTGTGAATCATCATATGTTAAAAGTTTCTTTTTTCAAATTTTAATGTAATCTTTTCTATGAGAGACTTGGTTGTTTCTTTCTTTCTTTCTTTTTTTATTTTTTATCTTAAGCTAGATTCAATAAAGACCACTACAAAACTTTGGGGATAACCCCAAATTTGTTGTTTTTTTGGTATATAATATACTTTTGGTCGAT

mRNA sequence

CTCCTATAAGAAATTTTAAACAGAGAATTTTGGAAAATGGGAAGGCAACCTTGTTGTGATAAAGTTGGGTTGAAGAAGGGACCATGGACTGCTGAAGAGGACAAAAAACTCATAAACTTCATTCTCACCAATGGCCAATGCTGTTGGAGGGCTCTCCCTAAACTTGCAGGATTGTTGAGATGTGGGAAGAGTTGTAGATTGAGATGGACGAATTATCTTAGGCCGGATTTGAAGAGAGGGCTCTTGTCCGAATATGAAGAGAAAATGGTCATTGATCTTCATTCTCAGCTGGGCAATAGGTGGTCAAAAATTGCTTCTCATCTTCCAGGAAGAACTGATAATGAGATAAAAAATCATTGGAACACTCACATAAAGAAGAAGCTAAGAAAAATGGGAATCGACCCTCAAACTCACAAGTCCATTACTCCACCTCCACAAAAAAAAACACTTCCACCACCACCGTCACCGAAAGAACCCAGCAAAGAGGTTGCGATCGATGAAACCGACATGATGGACTTGATCGCGGATGAGTTCTGCACAGAAGAAGTGCCTCTAATTGAAGCACATGAAATTCTAGTCCCTTGTACTTCATCTTCTTCAACAACCTCAACTTCTTATTCTTCATCTAATTCTTCATTTTGTTCAGCCAATTTGCTTCAAGATTTGGCGAATGAGTTTCCTGAATTTGAGTGGCCAAATATTTGTGAAAATGGGATAGTGGAGGATCAACTTTTGGAAGATGATTTTAGTGGTTGGGATTTTGTGGTTAATAATTATGGGGGTACTGGCAGTGGCAACTGCAATGATACTACTCGTGTTGGCTTGGAATTGGATCATTATCAACCTTGGACTTATGGCCTGTTGTGAATCATCATATGTTAAAAGTTTCTTTTTTCAAATTTTAATGTAATCTTTTCTATGAGAGACTTGGTTGTTTCTTTCTTTCTTTCTTTTTTTATTTTTTATCTTAAGCTAGATTCAATAAAGACCACTACAAAACTTTGGGGATAACCCCAAATTTGTTGTTTTTTTGGTATATAATATACTTTTGGTCGAT

Coding sequence (CDS)

ATGGGAAGGCAACCTTGTTGTGATAAAGTTGGGTTGAAGAAGGGACCATGGACTGCTGAAGAGGACAAAAAACTCATAAACTTCATTCTCACCAATGGCCAATGCTGTTGGAGGGCTCTCCCTAAACTTGCAGGATTGTTGAGATGTGGGAAGAGTTGTAGATTGAGATGGACGAATTATCTTAGGCCGGATTTGAAGAGAGGGCTCTTGTCCGAATATGAAGAGAAAATGGTCATTGATCTTCATTCTCAGCTGGGCAATAGGTGGTCAAAAATTGCTTCTCATCTTCCAGGAAGAACTGATAATGAGATAAAAAATCATTGGAACACTCACATAAAGAAGAAGCTAAGAAAAATGGGAATCGACCCTCAAACTCACAAGTCCATTACTCCACCTCCACAAAAAAAAACACTTCCACCACCACCGTCACCGAAAGAACCCAGCAAAGAGGTTGCGATCGATGAAACCGACATGATGGACTTGATCGCGGATGAGTTCTGCACAGAAGAAGTGCCTCTAATTGAAGCACATGAAATTCTAGTCCCTTGTACTTCATCTTCTTCAACAACCTCAACTTCTTATTCTTCATCTAATTCTTCATTTTGTTCAGCCAATTTGCTTCAAGATTTGGCGAATGAGTTTCCTGAATTTGAGTGGCCAAATATTTGTGAAAATGGGATAGTGGAGGATCAACTTTTGGAAGATGATTTTAGTGGTTGGGATTTTGTGGTTAATAATTATGGGGGTACTGGCAGTGGCAACTGCAATGATACTACTCGTGTTGGCTTGGAATTGGATCATTATCAACCTTGGACTTATGGCCTGTTGTGA

Protein sequence

MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMGIDPQTHKSITPPPQKKTLPPPPSPKEPSKEVAIDETDMMDLIADEFCTEEVPLIEAHEILVPCTSSSSTTSTSYSSSNSSFCSANLLQDLANEFPEFEWPNICENGIVEDQLLEDDFSGWDFVVNNYGGTGSGNCNDTTRVGLELDHYQPWTYGLL

Homology

[Close]

BLAST of Sed0004143 vs. NCBI nr
Match: XP_038875348.1 (transcription factor MYB20 [Benincasa hispida])

HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-117
Identity = 227/296 (76.69%), Postives = 241/296 (81.42%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSE EEKMVIDLHSQLGNRWSKIASHL GRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSEDEEKMVIDLHSQLGNRWSKIASHLSGRTDNEIKNHWNTHIKKKLKKMG 120

Query: 121 IDPQTHKSITP--------PPQKKTLPPPPSP-KEPSKEVAIDETDMMDLIADEFCTEEV 180
           IDPQTHK I+P           +K  P  PSP +EP KE A D TD++DLI D FCTEEV
Sbjct: 121 IDPQTHKPISPSSDDTHLLQKNQKQSPRRPSPSEEPEKEAAGDGTDIIDLIMDGFCTEEV 180

Query: 181 PLIEAHEILVPCTSSSSTTSTSYSSSNSSF----------CSANLLQDLANEFPEFEWPN 240
           PLIE HEILVPC SSSSTTSTSYSS++SS+           +ANLLQDL NEFPEFEWPN
Sbjct: 181 PLIEPHEILVPCASSSSTTSTSYSSNSSSYSYSSISSNSESAANLLQDLVNEFPEFEWPN 240

Query: 241 ICENGIVEDQLLEDDF-SGWDFVVNNYGGTGSGNCNDTTRVGLELDHYQPWTYGLL 277
           ICENGIVE  LLEDDF S WDFVVN+Y G GSGN  +   V  ELD+ Q W YGLL
Sbjct: 241 ICENGIVEG-LLEDDFGSSWDFVVNDYEG-GSGNNGNDPCVDFELDNSQSWVYGLL 294

[Close]

BLAST of Sed0004143 vs. NCBI nr
Match: XP_004140299.1 (transcription factor MYB20 [Cucumis sativus] >KGN51062.1 hypothetical protein Csa_008841 [Cucumis sativus])

HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-117
Identity = 226/300 (75.33%), Postives = 243/300 (81.00%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDK+GLKKGPWTAEEDKKLI+FILTNGQCCWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKIGLKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMG 120

Query: 121 IDPQTHKSI---------TPPPQKKTLPPPPSPKEPSKEVA-----IDETDMMDLIADEF 180
           IDPQTHKSI         T   ++++  PP  PKE  KEV      I ET++ DLI D F
Sbjct: 121 IDPQTHKSISQTSDDTHLTDKDKRQSSQPPSPPKELKKEVTAAKTDIIETNITDLIMDGF 180

Query: 181 CTEEVPLIEAHEILVPCTSSSSTTSTSYSSSN----SSFCS-----ANLLQDLANEFPEF 240
           CTEEVPLIE HEILVPC SSSSTTSTSYSSS+    SSF S     ANLLQDL NEFPEF
Sbjct: 181 CTEEVPLIEPHEILVPCASSSSTTSTSYSSSSSYSYSSFSSNPESAANLLQDLVNEFPEF 240

Query: 241 EWPNIC-ENGIVEDQLLEDDF-SGWDFVVNNYGGTGSGNCNDTTRVGLELDHYQPWTYGL 276
           EWPNIC ENGIVE+ LLEDDF S WDF+VNNY G  + N  +   VGLEL++ Q W YGL
Sbjct: 241 EWPNICEENGIVEEGLLEDDFGSSWDFMVNNYEGGNANNFGNDPFVGLELENSQSWVYGL 300

[Close]

BLAST of Sed0004143 vs. NCBI nr
Match: XP_022939068.1 (transcription factor MYB20-like [Cucurbita moschata])

HSP 1 Score: 411.8 bits (1057), Expect = 4.8e-111
Identity = 216/273 (79.12%), Postives = 225/273 (82.42%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWTAEED+KLI+FIL NGQCCWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDQKLISFILNNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKM 
Sbjct: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMA 120

Query: 121 IDPQTHKSITPP-----PQK--------KTLPPPPS--PKEPSKEVAIDETDMMDLIADE 180
           IDPQTHK I+P      PQK        +  PPP S  PKEP  EVA + T+MMD I D 
Sbjct: 121 IDPQTHKPISPTDDTHLPQKDQNRRKSQRKQPPPQSSPPKEPKFEVASNGTNMMDFIIDG 180

Query: 181 FCTEEVPLIEAHEILVPCTSSSSTTSTSYSS----SNSSFCS-----ANLLQDLANEFPE 240
           FCTEEVPLIE HEILVPC SSSS  +TSYSS    S SS CS     ANLLQDLANEFPE
Sbjct: 181 FCTEEVPLIEPHEILVPCASSSSAATTSYSSSTSTSTSSLCSNSESAANLLQDLANEFPE 240

Query: 241 FEWPNICENGIVEDQLLEDDF-SGWDFVVNNYG 249
           FEWPNICENGIVE +LLEDDF S WDFV NNYG
Sbjct: 241 FEWPNICENGIVE-ELLEDDFGSTWDFVANNYG 272

[Close]

BLAST of Sed0004143 vs. NCBI nr
Match: XP_022993217.1 (transcription factor MYB20-like [Cucurbita maxima])

HSP 1 Score: 410.6 bits (1054), Expect = 1.1e-110
Identity = 215/273 (78.75%), Postives = 224/273 (82.05%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWTAEED+KLI+FIL NGQCCWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDQKLISFILNNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKM 
Sbjct: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMA 120

Query: 121 IDPQTHKSITP--------------PPQKKTLPPPPS-PKEPSKEVAIDETDMMDLIADE 180
           IDPQTHK I+P                Q+K  PP PS PKE   EVA +E + MDLI D 
Sbjct: 121 IDPQTHKLISPTDDTHLSQKDQNHRKSQRKQPPPLPSPPKELKNEVAYNEINTMDLIIDG 180

Query: 181 FCTEEVPLIEAHEILVPCTSSSSTTSTSYSS----SNSSFCS-----ANLLQDLANEFPE 240
           FCTEEVPLIE HEILVPC SSSST +TSYSS    S SS CS     ANLLQDLANEFPE
Sbjct: 181 FCTEEVPLIEPHEILVPCASSSSTATTSYSSSMSTSTSSLCSNSESAANLLQDLANEFPE 240

Query: 241 FEWPNICENGIVEDQLLEDDF-SGWDFVVNNYG 249
           FEWPNICENGIVE +LLEDDF S WDFV NNYG
Sbjct: 241 FEWPNICENGIVE-ELLEDDFGSTWDFVANNYG 272

[Close]

BLAST of Sed0004143 vs. NCBI nr
Match: KAG6579037.1 (Transcription factor MYB20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016559.1 Protein ODORANT1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 406.8 bits (1044), Expect = 1.5e-109
Identity = 212/273 (77.66%), Postives = 222/273 (81.32%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWTAEED+KLI+FIL NGQCCWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDQKLISFILNNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTH+KKKLRKM 
Sbjct: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHVKKKLRKMA 120

Query: 121 IDPQTHKSITP--------------PPQKKTLPPPPS-PKEPSKEVAIDETDMMDLIADE 180
           IDPQTHK I+P                Q+K  PP  S PKEP  EVA + T+ MD I D 
Sbjct: 121 IDPQTHKPISPTDDTHLSQKDQNRRKSQRKQPPPQSSPPKEPKNEVASNGTNTMDFIIDG 180

Query: 181 FCTEEVPLIEAHEILVPCTSSSSTTSTSYSS----SNSSFCS-----ANLLQDLANEFPE 240
           FCTEEVPLIE HEILV C SSSST +TSYSS    S SS CS     ANLLQDLANEFPE
Sbjct: 181 FCTEEVPLIEPHEILVSCASSSSTATTSYSSSTSTSTSSLCSNSESAANLLQDLANEFPE 240

Query: 241 FEWPNICENGIVEDQLLEDDF-SGWDFVVNNYG 249
           FEWPNICENGIVE +LLEDDF S WDFV NNYG
Sbjct: 241 FEWPNICENGIVE-ELLEDDFGSTWDFVANNYG 272

[Close]

BLAST of Sed0004143 vs. ExPASy Swiss-Prot
Match: Q9C7U7 (Transcription factor MYB20 OS=Arabidopsis thaliana OX=3702 GN=MYB20 PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.2e-79
Identity = 170/288 (59.03%), Postives = 204/288 (70.83%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWTAEED+KLINFILTNGQCCWRA+PKL+GLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLS+YEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
Sbjct: 61  LRPDLKRGLLSDYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPQTHKSIT------PPPQKK----TLPPPPSPKEPSK---------EVAIDETDMMDL 180
           IDP THK ++        P KK    T+P   + + P +         E ++ +   M+ 
Sbjct: 121 IDPLTHKPLSIVEKEDEEPLKKLQNNTVPFQETMERPLENNIKNISRLEESLGDDQFME- 180

Query: 181 IADEFCTEEVPLIEAHEILVPC---TSSSSTTSTSYSSSNSSFCSANLLQDLANEFPEFE 240
           I  E+  E+VPLIE   + + C   T SSST+++S+SS++SSF     L+DL  +FPEFE
Sbjct: 181 INLEYGVEDVPLIETESLDLICSNSTMSSSTSTSSHSSNDSSF-----LKDL--QFPEFE 240

Query: 241 WP------NICENG---IVEDQLLE----DDFSGWDFVVNNYGGTGSG 254
           W       N   NG   I+E+ ++      DFS  D ++N+   +  G
Sbjct: 241 WSDYGNSNNDNNNGVDNIIENNMMSLWEISDFSSLDLLLNDESSSTFG 280

[Close]

BLAST of Sed0004143 vs. ExPASy Swiss-Prot
Match: Q50EX6 (MYB-like transcription factor ODO1 OS=Petunia hybrida OX=4102 GN=ODO1 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.2e-65
Identity = 137/250 (54.80%), Postives = 168/250 (67.20%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDK+G+KKGPWTAEEDKKLI+FILTNGQCCWRA+PKLAGL RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLS+ EEK+VIDLHS+LGNRWSKIA+ LPGRTDNEIKNHWNTHIKKKL KMG
Sbjct: 61  LRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMG 120

Query: 121 IDPQTHKSITPPPQKKTLPPPPSPKEPSKEVAIDETDMMDLIADEFCTEEVPLIEAHEIL 180
           IDP TH+     P KK       P   S +   +    + ++              +   
Sbjct: 121 IDPVTHE-----PLKKEANLSDQPTTESDQNKENGHQQVQVVPQ----------STNVTA 180

Query: 181 VPCTSSSSTTSTSYSSSNSSFCSANLLQDLANEFPEFEWPNICENGIVEDQLLEDDF--- 240
              TS+    ++S+SSS SS  +++   D +    +  + N+ EN  +   LLE D    
Sbjct: 181 AAATSTEFDNNSSFSSSASSSENSSCTTDES----KLVFDNLSENDPLLSCLLEADTPLI 231

Query: 241 -SGWDFVVNN 247
            S W+F +++
Sbjct: 241 DSPWEFPMSS 231

[Close]

BLAST of Sed0004143 vs. ExPASy Swiss-Prot
Match: P80073 (Myb-related protein Pp2 OS=Physcomitrium patens OX=3218 GN=PP2 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.0e-56
Identity = 92/126 (73.02%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGR+PCC+KVGL++GPWT+EED+KL++ I  NG  CWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRG+ SE EE +++DLH+ LGNRWS+IA+ LPGRTDNEIKN+WNT +KK+LR  G
Sbjct: 61  LRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQG 120

Query: 121 IDPQTH 127
           +DP TH
Sbjct: 121 LDPNTH 126

[Close]

BLAST of Sed0004143 vs. ExPASy Swiss-Prot
Match: Q9LE63 (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-51
Identity = 90/127 (70.87%), Postives = 105/127 (82.68%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGR PCCDK GLKKGPWT EED+KL+ +I  +G   WR+LP+ AGL RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKAGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPD+KRG  +  EE+ +I LH+ LGNRWS IA+HLP RTDNEIKN+WNTH+KK+L KMG
Sbjct: 61  LRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMG 120

Query: 121 IDPQTHK 128
           IDP THK
Sbjct: 121 IDPVTHK 127

[Close]

BLAST of Sed0004143 vs. ExPASy Swiss-Prot
Match: P81394 (Myb-related protein 315 OS=Antirrhinum majus OX=4151 GN=MYB315 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.0e-51
Identity = 89/127 (70.08%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           M RQPC +K GLK+GPWT EED+KL +++L NG   WR +PKLAGL RCGKSCRLRW NY
Sbjct: 1   MERQPCREKFGLKRGPWTEEEDQKLTSYVLKNGIQGWRVIPKLAGLSRCGKSCRLRWMNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLK+G L+E EE  +I+LH+ LGNRWSKIA H+PGRTDNEIKN+WNTHIKKKL+ +G
Sbjct: 61  LRPDLKKGPLTEMEENQIIELHAHLGNRWSKIALHIPGRTDNEIKNYWNTHIKKKLKLLG 120

Query: 121 IDPQTHK 128
           IDP  H+
Sbjct: 121 IDPNNHQ 127

[Close]

BLAST of Sed0004143 vs. ExPASy TrEMBL
Match: A0A0A0KRP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G425400 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.7e-118
Identity = 226/300 (75.33%), Postives = 243/300 (81.00%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDK+GLKKGPWTAEEDKKLI+FILTNGQCCWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKIGLKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMG 120

Query: 121 IDPQTHKSI---------TPPPQKKTLPPPPSPKEPSKEVA-----IDETDMMDLIADEF 180
           IDPQTHKSI         T   ++++  PP  PKE  KEV      I ET++ DLI D F
Sbjct: 121 IDPQTHKSISQTSDDTHLTDKDKRQSSQPPSPPKELKKEVTAAKTDIIETNITDLIMDGF 180

Query: 181 CTEEVPLIEAHEILVPCTSSSSTTSTSYSSSN----SSFCS-----ANLLQDLANEFPEF 240
           CTEEVPLIE HEILVPC SSSSTTSTSYSSS+    SSF S     ANLLQDL NEFPEF
Sbjct: 181 CTEEVPLIEPHEILVPCASSSSTTSTSYSSSSSYSYSSFSSNPESAANLLQDLVNEFPEF 240

Query: 241 EWPNIC-ENGIVEDQLLEDDF-SGWDFVVNNYGGTGSGNCNDTTRVGLELDHYQPWTYGL 276
           EWPNIC ENGIVE+ LLEDDF S WDF+VNNY G  + N  +   VGLEL++ Q W YGL
Sbjct: 241 EWPNICEENGIVEEGLLEDDFGSSWDFMVNNYEGGNANNFGNDPFVGLELENSQSWVYGL 300

[Close]

BLAST of Sed0004143 vs. ExPASy TrEMBL
Match: A0A6J1FKM8 (transcription factor MYB20-like OS=Cucurbita moschata OX=3662 GN=LOC111445079 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.3e-111
Identity = 216/273 (79.12%), Postives = 225/273 (82.42%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWTAEED+KLI+FIL NGQCCWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDQKLISFILNNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKM 
Sbjct: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMA 120

Query: 121 IDPQTHKSITPP-----PQK--------KTLPPPPS--PKEPSKEVAIDETDMMDLIADE 180
           IDPQTHK I+P      PQK        +  PPP S  PKEP  EVA + T+MMD I D 
Sbjct: 121 IDPQTHKPISPTDDTHLPQKDQNRRKSQRKQPPPQSSPPKEPKFEVASNGTNMMDFIIDG 180

Query: 181 FCTEEVPLIEAHEILVPCTSSSSTTSTSYSS----SNSSFCS-----ANLLQDLANEFPE 240
           FCTEEVPLIE HEILVPC SSSS  +TSYSS    S SS CS     ANLLQDLANEFPE
Sbjct: 181 FCTEEVPLIEPHEILVPCASSSSAATTSYSSSTSTSTSSLCSNSESAANLLQDLANEFPE 240

Query: 241 FEWPNICENGIVEDQLLEDDF-SGWDFVVNNYG 249
           FEWPNICENGIVE +LLEDDF S WDFV NNYG
Sbjct: 241 FEWPNICENGIVE-ELLEDDFGSTWDFVANNYG 272

[Close]

BLAST of Sed0004143 vs. ExPASy TrEMBL
Match: A0A6J1JS62 (transcription factor MYB20-like OS=Cucurbita maxima OX=3661 GN=LOC111489304 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 5.2e-111
Identity = 215/273 (78.75%), Postives = 224/273 (82.05%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWTAEED+KLI+FIL NGQCCWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDQKLISFILNNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKM 
Sbjct: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMA 120

Query: 121 IDPQTHKSITP--------------PPQKKTLPPPPS-PKEPSKEVAIDETDMMDLIADE 180
           IDPQTHK I+P                Q+K  PP PS PKE   EVA +E + MDLI D 
Sbjct: 121 IDPQTHKLISPTDDTHLSQKDQNHRKSQRKQPPPLPSPPKELKNEVAYNEINTMDLIIDG 180

Query: 181 FCTEEVPLIEAHEILVPCTSSSSTTSTSYSS----SNSSFCS-----ANLLQDLANEFPE 240
           FCTEEVPLIE HEILVPC SSSST +TSYSS    S SS CS     ANLLQDLANEFPE
Sbjct: 181 FCTEEVPLIEPHEILVPCASSSSTATTSYSSSMSTSTSSLCSNSESAANLLQDLANEFPE 240

Query: 241 FEWPNICENGIVEDQLLEDDF-SGWDFVVNNYG 249
           FEWPNICENGIVE +LLEDDF S WDFV NNYG
Sbjct: 241 FEWPNICENGIVE-ELLEDDFGSTWDFVANNYG 272

[Close]

BLAST of Sed0004143 vs. ExPASy TrEMBL
Match: A0A6J1JL19 (transcription factor MYB20-like OS=Cucurbita maxima OX=3661 GN=LOC111487852 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 8.5e-106
Identity = 203/273 (74.36%), Postives = 220/273 (80.59%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWTAEEDKKLINF+ TNGQCCWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFLHTNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSEYEEKMVIDLHS +GNRWSKIASHLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSEYEEKMVIDLHSHMGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMG 120

Query: 121 IDPQTHKSITP-------------PPQKKTLPPPPSP----KEPSKEVAIDETDMMDLIA 180
           IDPQTHK ++P               Q++  P  PSP    KE  KE  IDETD+MDL+ 
Sbjct: 121 IDPQTHKPVSPLSDDAHLAHKNDQKSQQQQFPSLPSPSRALKEHDKETVIDETDVMDLLV 180

Query: 181 DEFCTEE-VPLIE-AHEILVPCTSSSSTTST---SYSSSNSSFCS-----ANLLQDLANE 240
           D FC EE V LIE   E++VPC SSSST ST   S  SS+SSFCS     ANLLQDL NE
Sbjct: 181 DGFCMEEDVSLIEPPQEVVVPCASSSSTISTPSSSTPSSSSSFCSHSESAANLLQDLVNE 240

Query: 241 FPEFEWPNICENGIVEDQLLEDDFSGWDFVVNN 247
           FPEFEWPNICENG+V D+LLEDDF GWDF++NN
Sbjct: 241 FPEFEWPNICENGLV-DELLEDDFGGWDFIINN 272

[Close]

BLAST of Sed0004143 vs. ExPASy TrEMBL
Match: A0A6J1H9H5 (transcription factor MYB20-like OS=Cucurbita moschata OX=3662 GN=LOC111461731 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.7e-104
Identity = 199/275 (72.36%), Postives = 223/275 (81.09%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWTAEEDKKLINF+ TNGQCCWRA+PKLAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFLHTNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSEYEEKMV+DLHSQ+GNRWSKIASHLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSEYEEKMVVDLHSQMGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMG 120

Query: 121 IDPQTHKSITP-------------PPQKKTLPPPPSP------KEPSKEVAIDETDMMDL 180
           IDPQTHK I+P               +++  PP PSP      +E  KE+ IDETD+M+L
Sbjct: 121 IDPQTHKPISPLSNDAHLAHQNDQKSRQQQSPPSPSPSPSRALEEHDKEIVIDETDVMNL 180

Query: 181 IADEFCTEE-VPLIE-AHEILVPCTSSSSTTST---SYSSSNSSFCS-----ANLLQDLA 240
           + D FCTEE V LIE   ++ VPC SSSSTTST   S  SS+SSFCS     ANLLQDL 
Sbjct: 181 LVDGFCTEEDVSLIEPLQDVGVPCASSSSTTSTPSSSTPSSSSSFCSHSESAANLLQDLV 240

Query: 241 NEFPEFEWPNICENGIVEDQLLEDDFSGWDFVVNN 247
           NEFPEFEWPNICENG++ D+LLED+  GWDF+++N
Sbjct: 241 NEFPEFEWPNICENGLL-DELLEDELGGWDFIIDN 274

[Close]

BLAST of Sed0004143 vs. TAIR 10
Match: AT1G66230.1 (myb domain protein 20 )

HSP 1 Score: 297.0 bits (759), Expect = 1.6e-80
Identity = 170/288 (59.03%), Postives = 204/288 (70.83%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWTAEED+KLINFILTNGQCCWRA+PKL+GLLRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLS+YEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
Sbjct: 61  LRPDLKRGLLSDYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPQTHKSIT------PPPQKK----TLPPPPSPKEPSK---------EVAIDETDMMDL 180
           IDP THK ++        P KK    T+P   + + P +         E ++ +   M+ 
Sbjct: 121 IDPLTHKPLSIVEKEDEEPLKKLQNNTVPFQETMERPLENNIKNISRLEESLGDDQFME- 180

Query: 181 IADEFCTEEVPLIEAHEILVPC---TSSSSTTSTSYSSSNSSFCSANLLQDLANEFPEFE 240
           I  E+  E+VPLIE   + + C   T SSST+++S+SS++SSF     L+DL  +FPEFE
Sbjct: 181 INLEYGVEDVPLIETESLDLICSNSTMSSSTSTSSHSSNDSSF-----LKDL--QFPEFE 240

Query: 241 WP------NICENG---IVEDQLLE----DDFSGWDFVVNNYGGTGSG 254
           W       N   NG   I+E+ ++      DFS  D ++N+   +  G
Sbjct: 241 WSDYGNSNNDNNNGVDNIIENNMMSLWEISDFSSLDLLLNDESSSTFG 280

[Close]

BLAST of Sed0004143 vs. TAIR 10
Match: AT5G16600.1 (myb domain protein 43 )

HSP 1 Score: 285.8 bits (730), Expect = 3.7e-77
Identity = 167/330 (50.61%), Postives = 202/330 (61.21%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDKVGLKKGPWT EEDKKLINFILTNG CCWRALPKL+GLLRCGKSCRLRW NY
Sbjct: 1   MGRQPCCDKVGLKKGPWTIEEDKKLINFILTNGHCCWRALPKLSGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLSEYEE+ VI+LH+QLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
Sbjct: 61  LRPDLKRGLLSEYEEQKVINLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPQTHKSITPPP-------QKKTLPPPPSPKEPSKEVAIDETDMMDL-----------I 180
           IDP THK ++          +KK+L P         +   DE +   L            
Sbjct: 121 IDPLTHKPLSEQEASQQAQGRKKSLVPHDDKNPKQDQQTKDEQEQHQLEQALEKNNTSVS 180

Query: 181 ADEFCTEEVPLIEAHEILVPCTSS--------------SSTTSTSYSSSNSSFCSANLL- 240
            D FC +EVPL+  HEIL+  +SS              S  TS S SSS++S C ++++ 
Sbjct: 181 GDGFCIDEVPLLNPHEILIDISSSHHHHSNDDNVNINTSKFTSPSSSSSSTSSCISSVVP 240

Query: 241 -QDLANEFPEFE-----W--------PNICENGIVEDQLLE-------DDFSGWDFVVNN 277
             + +  F E E     W         +I ++G   +  ++       +D S  D  +N 
Sbjct: 241 GDEFSKFFDEMEILDLKWLSSDDSLGDDISKDGKFNNSTVDTMNLWDINDLSSLDMFMNE 300

[Close]

BLAST of Sed0004143 vs. TAIR 10
Match: AT4G12350.1 (myb domain protein 42 )

HSP 1 Score: 245.4 bits (625), Expect = 5.5e-65
Identity = 110/129 (85.27%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDK+ +KKGPWTAEEDKKLINFILTNG CCWRALPKLAGL RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLS+ EE++VIDLH+ LGNRWSKIA+ LPGRTDNEIKNHWNTHIKKKL KM 
Sbjct: 61  LRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKME 120

Query: 121 IDPQTHKSI 130
           IDP TH+ +
Sbjct: 121 IDPSTHQPL 129

[Close]

BLAST of Sed0004143 vs. TAIR 10
Match: AT4G22680.1 (myb domain protein 85 )

HSP 1 Score: 245.0 bits (624), Expect = 7.2e-65
Identity = 139/256 (54.30%), Postives = 165/256 (64.45%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGRQPCCDK+G+KKGPWT EEDKKLINFILTNG CCWRALPKLAGL RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTVEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRGLLS  EE++VIDLH+ LGN+WSKIAS LPGRTDNEIKNHWNTHIKKKL KMG
Sbjct: 61  LRPDLKRGLLSHDEEQLVIDLHANLGNKWSKIASRLPGRTDNEIKNHWNTHIKKKLLKMG 120

Query: 121 IDPQTHKSITPPP----QKKTLPPPPSPKEPSKEVAIDETDMMDLIADEFCTEEVPLIEA 180
           IDP TH+ +   P      KT+  P +P + S E     T  +++      TEE      
Sbjct: 121 IDPMTHQPLNQEPSNIDNSKTI--PSNPDDVSVEPKTTNTKYVEISVT--TTEE------ 180

Query: 181 HEILVPCTSSSSTTSTSYSSSNSSFCSANLLQDLANEFPEFEWPNICENGIVEDQLLEDD 240
                   SSS+ T  + S  N +    N+  D  +E   + W          D+  +D+
Sbjct: 181 -------ESSSTVTDQNSSMDNENHLIDNIYDD--DELFSYLW---------SDETTKDE 225

Query: 241 FSGWDFVVNNYGGTGS 253
            S  D   +N+G  G+
Sbjct: 241 ASWSD---SNFGVGGT 225

[Close]

BLAST of Sed0004143 vs. TAIR 10
Match: AT5G14340.1 (myb domain protein 40 )

HSP 1 Score: 215.3 bits (547), Expect = 6.1e-56
Identity = 128/270 (47.41%), Postives = 159/270 (58.89%), Query Frame = 0


Query: 1   MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNY 60
           MGR+PCCDK+GLK+GPWT EED +L+NFIL NG  CWR +PKLAGLLRCGKSCRLRW NY
Sbjct: 1   MGRKPCCDKIGLKRGPWTIEEDHRLMNFILNNGIHCWRIVPKLAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGLLSEYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120
           LRPDLKRG  ++ EE  +++LHSQLGNRWSKIASH  GRTDNEIKNHWNT IKKK++ +G
Sbjct: 61  LRPDLKRGGFTDAEEDRIMELHSQLGNRWSKIASHFSGRTDNEIKNHWNTKIKKKMKHLG 120

Query: 121 IDPQTHKSI------TPPPQKK------TLPPPPSPKEPS-KEVAIDETDMMDLIADE-- 180
           +DP THK +      T P Q K      T+      K+ + K+  I ET    +++D   
Sbjct: 121 LDPATHKPMNDITHQTDPNQDKKPNMCSTINEGEEIKDQTPKDDVITETTKTLMLSDNDE 180

Query: 181 ---------FCTEEVPLIEAHEILVPCTSSSSTTSTSYSSSNSSFCSANLLQDLANEFPE 240
                     C EEV L    E     T  +  +S+S+SS  S+   +     LA +   
Sbjct: 181 ELVAKNCKILCAEEVDLESLFE-----TQCNEISSSSFSSLCSNISRSESSSYLAEDSIS 240

Query: 241 FE-WPNICENGIVEDQLLEDDFSGWDFVVN 246
            E W          D  + D F  WD   N
Sbjct: 241 LEQW----------DLDMTDPFVPWDLFAN 255

The following BLAST results are available for this feature:

BLAST of Sed0004143 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875348.1	1.2e-117	76.69	transcription factor MYB20 [Benincasa hispida]	[more]
XP_004140299.1	1.2e-117	75.33	transcription factor MYB20 [Cucumis sativus] >KGN51062.1 hypothetical protein Cs...	[more]
XP_022939068.1	4.8e-111	79.12	transcription factor MYB20-like [Cucurbita moschata]	[more]
XP_022993217.1	1.1e-110	78.75	transcription factor MYB20-like [Cucurbita maxima]	[more]
KAG6579037.1	1.5e-109	77.66	Transcription factor MYB20, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]

BLAST of Sed0004143 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7U7	2.2e-79	59.03	Transcription factor MYB20 OS=Arabidopsis thaliana OX=3702 GN=MYB20 PE=2 SV=1	[more]
Q50EX6	9.2e-65	54.80	MYB-like transcription factor ODO1 OS=Petunia hybrida OX=4102 GN=ODO1 PE=2 SV=1	[more]
P80073	2.0e-56	73.02	Myb-related protein Pp2 OS=Physcomitrium patens OX=3218 GN=PP2 PE=2 SV=1	[more]
Q9LE63	1.5e-51	70.87	Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1	[more]
P81394	2.0e-51	70.08	Myb-related protein 315 OS=Antirrhinum majus OX=4151 GN=MYB315 PE=2 SV=1	[more]

BLAST of Sed0004143 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRP9	5.7e-118	75.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G425400 PE=4 SV=1	[more]
A0A6J1FKM8	2.3e-111	79.12	transcription factor MYB20-like OS=Cucurbita moschata OX=3662 GN=LOC111445079 PE...	[more]
A0A6J1JS62	5.2e-111	78.75	transcription factor MYB20-like OS=Cucurbita maxima OX=3661 GN=LOC111489304 PE=4...	[more]
A0A6J1JL19	8.5e-106	74.36	transcription factor MYB20-like OS=Cucurbita maxima OX=3661 GN=LOC111487852 PE=4...	[more]
A0A6J1H9H5	2.7e-104	72.36	transcription factor MYB20-like OS=Cucurbita moschata OX=3662 GN=LOC111461731 PE...	[more]

BLAST of Sed0004143 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66230.1	1.6e-80	59.03	myb domain protein 20	[more]
AT5G16600.1	3.7e-77	50.61	myb domain protein 43	[more]
AT4G12350.1	5.5e-65	85.27	myb domain protein 42	[more]
AT4G22680.1	7.2e-65	54.30	myb domain protein 85	[more]
AT5G14340.1	6.1e-56	47.41	myb domain protein 40	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 e-value: 6.3E-14 score: 62.3 coord: 13..63 e-value: 9.9E-12 score: 55.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 10.12742
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 10.278382
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 1.079E-8 score: 48.3406
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 74..112 e-value: 7.77563E-11 score: 54.1186
None	No IPR available	GENE3D	1.10.10.60		coord: 11..67 e-value: 6.8E-17 score: 63.2
None	No IPR available	GENE3D	1.10.10.60		coord: 70..137 e-value: 1.8E-21 score: 77.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..147
None	No IPR available	PANTHER	PTHR47998	TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1	coord: 1..227
None	No IPR available	PANTHER	PTHR47998:SF5	MYB TRANSCRIPTION FACTOR-RELATED	coord: 1..227
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 7.1E-12 score: 45.3 coord: 71..111 e-value: 7.1E-13 score: 48.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 62..116 score: 25.434458
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..61 score: 14.577902
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004143.1	Sed0004143.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0031323	regulation of cellular metabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding