Sed0004050 (gene) Chayote v1

Overview


Name	Sed0004050
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S ribosomal protein L10-like
Location	LG04: 30054851 .. 30057362 (+)
RNA-Seq Expression	Sed0004050
Synteny	Sed0004050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGCCGCTACATCTCTCCGAGGTATGAAATCTACTCTTTCTTTCTTCGTTTCGTAATCTTTTCTTCGATCGAAAATTTGATGTTAGTTGATTTCTGAATCTGAAAACTAGCCATTGTTATTGCTTGTGTTGTATTCGGCAAATCGTAGGTTTTCGTTTCGAAAGTTCTTGAGTTCCGTTTAGGCATAGTTTTTCTTCTGAATCTTGAGCGTTTTACGGTTTTCTTTTACGCATTGTGGTTAATGCATACGGTAGATGAACATGAATCGAATGATTTTTTCTTAAAACTGAAAAAAGATAATGTACAAAATAGGATTTGTACGGTAGAAAATTGTTTTGGCTTCTGTTTCGTATATGGAAGGATGGAAGGTCATGAAGGATGCAATTTGGCGGATCTGGTGCAACTCATGACTGCCTAGATTGATCCTGCTGGTGATATATTTGCCCGGGCATGATGTTTGTCTTACATCTGAGTGTATTCCCTAGAAAACAATGAACCCGATTCTGTCTTTGTATGTGGATTATCTTAGTTATTTGCACTGTTATAATGTATATTGTCGGTACTGAGTTTTTTCTGTTAGTTTATATGCTCCCCTTTGAATTTAACAAGAGGATTTGAATTATGATGCACTAAAGAGTTGCATAAAAACATTTGGTTAAGTTGGATTGGAGCAAGGGCCAAGGCATCGCATGCTGATTACCAGATTTGCTTGTGAGCTTTGGCCTTCTGCTTTGTGTAATTGAAGAACTAAATCTAGTTCCATCATTTTATTATATGGTTGCTTCTGTGGAAGATGATGATTGAAGCAGGTACTGATGATAATTGTGCATATCTTACTGTTCTCCTGGTGTGGCTAAGTGTAGTTGTGCCGAGTTTCAAGGATATGCCTTTATGATTTACACAACTGCTCTCTGATTCATTTTCTGTTCATTATGTACATGTTGAATGGCCAAAAAATTGATTCCTTTTTTACACAACTTGATTGGTTATGACTGCAATGACCAAACTATGAGTGGTGCCTTGACTGTTGATTTTTTTGTGTTCATCTTTATCTATGTATGAAGTTAAACTGATTACAGCATTTTCCTGTCACAAGGAGATGGGAAATAGGGGATGTTTTGAGAATAGGGAGAGAATATTCGATAGATTTGGTAGCAATTTCATTGGTTTTCAGTTTTGGATTTTTAGTGAAATATTTTGTGACGTTTTATTTTCTTACAACCATGCAGTTCAAGTTTGAGTACACTTACAATGGGGAGAAGGCCTGCTAGGTGTTACCGACAGATTAAAAACAAGCCATACCCGAAGTCACGATTTTGTCGTGGTGTCCCTGATCCTAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAAGGAGTTGATGAGTTTCCCTTCTGTGTCCACCTTGTGAGTTGGGAGAAGGAAAATGTGTCAAGTGAGGCTCTGGAAGCAGCTAGGATTGCCTGCAACAAGTATATGACCAAGTTTGCTGGGAAGGATGCCTTCCATTTGAGAATCAGGGTGCACCCATTCCATGTTCTGCGGATCAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGCAAACCACAAGGTGTCTGTGCTAGAGTGGACATTGGTCAGGTTCTCCTTTCGGTTCGCTGCAAGGACAACAATGGTCAGAATGCACAGGAGGCTCTCCGCCGTGCTAAGTTCAAGTTCCCTGGTCGTCAAAAGATTATTGTCAGCAGGAAGTGGGGATTCACTAAATTCAGCCGAGCCGATTATCTTCAGTACAAGGCAGAGAACAAGATCGTTCCAGATGGTGTTAATGCAAAACTTCTTGGATGCCATGGGCCTCTAGCCAACCGTCAGCCGGGAAGAGCTTTTCTACCTGAAACTGCCTAGACTCTGTCAGTTGTTTTCTTGTTTGATTTATTTAGAATTATCGTTGACATTTTGTTTTACCATTGGTTGTTTTGAACTTTTGTTTTTAGACTGTTTTATCTTTTATCATAATCTTATCTGAGTCTTCGTTTGAAACTTCTCCATTCTTAGTTCTCCATGATCGTTTTGTTCCACCCATTTTCTGACCATTATCTTTCCCTGAAGTTCTGATTGAGTTTATTGTCCTTCATATATCTCATGTGCTATGGATATATTCCTGGGTTACTCTAGGTTGTGTTTGGGTTTGCTGTTCTAAAGCACTAGTTGTTAAGTTGTGATGTTCTTGCCAACAAGAGTATGACATGAATATCTTCTTTTAAATTTAAATCGCTCTTAAAACATTGCAAAATTTTAGATACTGTCTAATGCAAATTTTGCTTACAGAGACCATAATTTAATTGTACAAGTGTGGCTAATTTAGCTCACGAAAATCATTCATTATTCTCGTATATTTATTCTCGATAGTTTTTCAGACTCCTTGCAACGTAGGAAGGGTTCAGGGTTTTGTTTACTCTGCCTTAATTTTTAATTAAATCAACCAAATAGCAAAATAGCCTT

mRNA sequence

GGCGCCGCTACATCTCTCCGAGGTATGAAATCTACTCTTTCTTTCTTCGTTTCGTAATCTTTTCTTCGATCGAAAATTTGATGTTAGTTGATTTCTGAATCTGAAAACTAGCCATTGTTATTGCTTGTGTTGTATTCGGCAAATCGTAGGTTTTCGTTTCGAAAGTTCTTGAGTTCCGTTTAGGCATAGTTTTTCTTCTGAATCTTGAGCGTTTTACGGTTTTCTTTTACGCATTGTGGTTAATGCATACGGTAGATGAACATGAATCGAATGATTTTTTCTTAAAACTGAAAAAAGATAATGTACAAAATAGGATTTGTACGGTAGAAAATTGTTTTGGCTTCTGTTTCGTATATGGAAGGATGGAAGGTCATGAAGGATGCAATTTGGCGGATCTGGTGCAACTCATGACTGCCTAGATTGATCCTGCTGGTGATATATTTGCCCGGGCATGATGTTTGTCTTACATCTGAGTGTATTCCCTAGAAAACAATGAACCCGATTCTGTCTTTTTCAAGTTTGAGTACACTTACAATGGGGAGAAGGCCTGCTAGGTGTTACCGACAGATTAAAAACAAGCCATACCCGAAGTCACGATTTTGTCGTGGTGTCCCTGATCCTAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAAGGAGTTGATGAGTTTCCCTTCTGTGTCCACCTTGTGAGTTGGGAGAAGGAAAATGTGTCAAGTGAGGCTCTGGAAGCAGCTAGGATTGCCTGCAACAAGTATATGACCAAGTTTGCTGGGAAGGATGCCTTCCATTTGAGAATCAGGGTGCACCCATTCCATGTTCTGCGGATCAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGCAAACCACAAGGTGTCTGTGCTAGAGTGGACATTGGTCAGGTTCTCCTTTCGGTTCGCTGCAAGGACAACAATGGTCAGAATGCACAGGAGGCTCTCCGCCGTGCTAAGTTCAAGTTCCCTGGTCGTCAAAAGATTATTGTCAGCAGGAAGTGGGGATTCACTAAATTCAGCCGAGCCGATTATCTTCAGTACAAGGCAGAGAACAAGATCGTTCCAGATGGTGTTAATGCAAAACTTCTTGGATGCCATGGGCCTCTAGCCAACCGTCAGCCGGGAAGAGCTTTTCTACCTGAAACTGCCTAGACTCTGTCAGTTGTTTTCTTGTTTGATTTATTTAGAATTATCGTTGACATTTTGTTTTACCATTGGTTGTTTTGAACTTTTGTTTTTAGACTGTTTTATCTTTTATCATAATCTTATCTGAGTCTTCGTTTGAAACTTCTCCATTCTTAGTTCTCCATGATCGTTTTGTTCCACCCATTTTCTGACCATTATCTTTCCCTGAAGTTCTGATTGAGTTTATTGTCCTTCATATATCTCATGTGCTATGGATATATTCCTGGGTTACTCTAGGTTGTGTTTGGGTTTGCTGTTCTAAAGCACTAGTTGTTAAGTTGTGATGTTCTTGCCAACAAGAGTATGACATGAATATCTTCTTTTAAATTTAAATCGCTCTTAAAACATTGCAAAATTTTAGATACTGTCTAATGCAAATTTTGCTTACAGAGACCATAATTTAATTGTACAAGTGTGGCTAATTTAGCTCACGAAAATCATTCATTATTCTCGTATATTTATTCTCGATAGTTTTTCAGACTCCTTGCAACGTAGGAAGGGTTCAGGGTTTTGTTTACTCTGCCTTAATTTTTAATTAAATCAACCAAATAGCAAAATAGCCTT

Coding sequence (CDS)

ATGAACCCGATTCTGTCTTTTTCAAGTTTGAGTACACTTACAATGGGGAGAAGGCCTGCTAGGTGTTACCGACAGATTAAAAACAAGCCATACCCGAAGTCACGATTTTGTCGTGGTGTCCCTGATCCTAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAAGGAGTTGATGAGTTTCCCTTCTGTGTCCACCTTGTGAGTTGGGAGAAGGAAAATGTGTCAAGTGAGGCTCTGGAAGCAGCTAGGATTGCCTGCAACAAGTATATGACCAAGTTTGCTGGGAAGGATGCCTTCCATTTGAGAATCAGGGTGCACCCATTCCATGTTCTGCGGATCAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGCAAACCACAAGGTGTCTGTGCTAGAGTGGACATTGGTCAGGTTCTCCTTTCGGTTCGCTGCAAGGACAACAATGGTCAGAATGCACAGGAGGCTCTCCGCCGTGCTAAGTTCAAGTTCCCTGGTCGTCAAAAGATTATTGTCAGCAGGAAGTGGGGATTCACTAAATTCAGCCGAGCCGATTATCTTCAGTACAAGGCAGAGAACAAGATCGTTCCAGATGGTGTTAATGCAAAACTTCTTGGATGCCATGGGCCTCTAGCCAACCGTCAGCCGGGAAGAGCTTTTCTACCTGAAACTGCCTAG

Protein sequence

MNPILSFSSLSTLTMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA

Homology

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BLAST of Sed0004050 vs. NCBI nr
Match: XP_008451785.1 (PREDICTED: 60S ribosomal protein L10-like [Cucumis melo] >TYK16331.1 60S ribosomal protein L10-like [Cucumis melo var. makuwa])

HSP 1 Score: 454.9 bits (1169), Expect = 4.2e-124
Identity = 214/220 (97.27%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KPQG CARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           YL+YKAENKI+PDGVNAKLLGCHGPLANRQPGRAFL +TA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

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BLAST of Sed0004050 vs. NCBI nr
Match: XP_038906131.1 (60S ribosomal protein L10-like [Benincasa hispida])

HSP 1 Score: 453.8 bits (1166), Expect = 9.3e-124
Identity = 213/220 (96.82%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KPQG CARVDIGQVLLSVRC+DNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCRDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           YL+YKAENKI+PDGVNAKLLGCHGPLANRQPGRAFL +TA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]

BLAST of Sed0004050 vs. NCBI nr
Match: XP_004137249.1 (60S ribosomal protein L10 [Cucumis sativus] >KAE8649248.1 hypothetical protein Csa_015270 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 3.5e-123
Identity = 212/220 (96.36%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KPQG CARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           YL+YKAENKI+PDGVNAKLLGCHGPLANRQPGRAFL + A
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQNA 220

[Close]

BLAST of Sed0004050 vs. NCBI nr
Match: XP_022931333.1 (60S ribosomal protein L10-like [Cucurbita moschata] >XP_022985026.1 60S ribosomal protein L10-like [Cucurbita maxima] >XP_023553543.1 60S ribosomal protein L10-like [Cucurbita pepo subsp. pepo] >KAG6577053.1 60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 449.5 bits (1155), Expect = 1.8e-122
Identity = 211/220 (95.91%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KP G CARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPLGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           YL+YKAENKI+PDGVNAKLLGCHGPLANRQPGRAFL +TA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]

BLAST of Sed0004050 vs. NCBI nr
Match: XP_022942135.1 (60S ribosomal protein L10-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 449.1 bits (1154), Expect = 2.3e-122
Identity = 211/221 (95.48%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 14  TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN 73
           TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKEN
Sbjct: 21  TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKEN 80

Query: 74  VSSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAF 133
           VSSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAF
Sbjct: 81  VSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 140

Query: 134 GKPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 193
           GKPQG CARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA
Sbjct: 141 GKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 200

Query: 194 DYLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           DYL++KAENKI+PDGVNAKLLGCHGPLANRQPGRAFL + A
Sbjct: 201 DYLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 241

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BLAST of Sed0004050 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 4.2e-119
Identity = 202/220 (91.82%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KPQGVCARV IGQVLLSVRCKDNN  NAQEALRRAKFKFPGRQKIIVSRKWGFTK +RAD
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRAD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           Y + K+EN+I+PDGVNAKLLGCHG LANR+PGRAF+   A
Sbjct: 181 YPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFIDAVA 220

[Close]

BLAST of Sed0004050 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 2.7e-118
Identity = 202/216 (93.52%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTK AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KPQGVCARV IGQVLLSVRCKD N  +AQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFL 231
           YL+YK+EN+IVPDGVNAKLLG HGPLA RQPGRAFL
Sbjct: 181 YLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFL 216

[Close]

BLAST of Sed0004050 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 7.9e-118
Identity = 195/216 (90.28%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTK+AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KPQG CARV IGQVLLSVRCKD N  +AQEALRRAKFKFP RQKIIVSRKWGFTKF+R D
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFL 231
           Y+++K++N+I+PDGVNAKLLGCHGPLANRQPG+AF+
Sbjct: 181 YIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFI 216

[Close]

BLAST of Sed0004050 vs. ExPASy Swiss-Prot
Match: Q93VT9 (60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.2e-112
Identity = 191/217 (88.02%), Postives = 201/217 (92.63%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYM K AGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           K  G CARV IGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLP 232
           + + + E ++VPDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 217

[Close]

BLAST of Sed0004050 vs. ExPASy Swiss-Prot
Match: A2ZCQ7 (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica OX=39946 GN=SC34 PE=2 SV=2)

HSP 1 Score: 405.6 bits (1041), Expect = 3.8e-112
Identity = 190/219 (86.76%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTK AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KPQG CARVDIGQVLLSVRCK++N ++A+EALRRAKFKFPGRQKII SRKWGFTKF+R +
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREE 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPET 234
           Y++ KAE +I+ DGVNA+LLG HG LA R PG+AFL ET
Sbjct: 181 YVKLKAEGRIMSDGVNAQLLGSHGRLAKRAPGKAFLAET 219

[Close]

BLAST of Sed0004050 vs. ExPASy TrEMBL
Match: A0A5D3CWP6 (60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001130 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.0e-124
Identity = 214/220 (97.27%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KPQG CARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           YL+YKAENKI+PDGVNAKLLGCHGPLANRQPGRAFL +TA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]

BLAST of Sed0004050 vs. ExPASy TrEMBL
Match: A0A1S3BT36 (60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103492967 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.0e-124
Identity = 214/220 (97.27%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KPQG CARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           YL+YKAENKI+PDGVNAKLLGCHGPLANRQPGRAFL +TA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]

BLAST of Sed0004050 vs. ExPASy TrEMBL
Match: A0A6J1J6Y1 (60S ribosomal protein L10-like OS=Cucurbita maxima OX=3661 GN=LOC111483117 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.5e-123
Identity = 211/220 (95.91%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KP G CARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPLGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           YL+YKAENKI+PDGVNAKLLGCHGPLANRQPGRAFL +TA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]

BLAST of Sed0004050 vs. ExPASy TrEMBL
Match: A0A6J1EY90 (60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111437559 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.5e-123
Identity = 211/220 (95.91%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           KP G CARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPLGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           YL+YKAENKI+PDGVNAKLLGCHGPLANRQPGRAFL +TA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]

BLAST of Sed0004050 vs. ExPASy TrEMBL
Match: A0A6J1FVN9 (60S ribosomal protein L10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447292 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122
Identity = 211/221 (95.48%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 14  TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN 73
           TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKEN
Sbjct: 21  TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKEN 80

Query: 74  VSSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAF 133
           VSSEALEAARIACNKYMTKFAGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAF
Sbjct: 81  VSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 140

Query: 134 GKPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 193
           GKPQG CARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA
Sbjct: 141 GKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 200

Query: 194 DYLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           DYL++KAENKI+PDGVNAKLLGCHGPLANRQPGRAFL + A
Sbjct: 201 DYLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 241

[Close]

BLAST of Sed0004050 vs. TAIR 10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 406.4 bits (1043), Expect = 1.6e-113
Identity = 191/217 (88.02%), Postives = 201/217 (92.63%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYM K AGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           K  G CARV IGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLP 232
           + + + E ++VPDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 217

[Close]

BLAST of Sed0004050 vs. TAIR 10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 404.8 bits (1039), Expect = 4.6e-113
Identity = 191/216 (88.43%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYM K AGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           K  G CARV IGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFL 231
           Y + + E +IVPDGVNAK L CHGPLANRQPG AFL
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFL 216

[Close]

BLAST of Sed0004050 vs. TAIR 10
Match: AT1G66580.1 (senescence associated gene 24 )

HSP 1 Score: 402.5 bits (1033), Expect = 2.3e-112
Identity = 191/220 (86.82%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYM K AGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
           K  G CARV IGQVLLSVRCKDN+G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAE 180

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPETA 235
           Y + +A  +IVPDGVNAK L  HGPLANRQPG AF+  T+
Sbjct: 181 YTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFISATS 220

[Close]

BLAST of Sed0004050 vs. TAIR 10
Match: AT1G14320.2 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 277.7 bits (709), Expect = 8.5e-75
Identity = 140/217 (64.52%), Postives = 150/217 (69.12%), Query Frame = 0


Query: 15  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 74
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 75  SSEALEAARIACNKYMTKFAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 134
           SSEALEAARIACNKYM                                            
Sbjct: 61  SSEALEAARIACNKYM-------------------------------------------- 120

Query: 135 KPQGVCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 194
                        VLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 -------------VLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 160

Query: 195 YLQYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLP 232
           + + + E ++VPDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 160

The following BLAST results are available for this feature:

BLAST of Sed0004050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451785.1	4.2e-124	97.27	PREDICTED: 60S ribosomal protein L10-like [Cucumis melo] >TYK16331.1 60S ribosom...	[more]
XP_038906131.1	9.3e-124	96.82	60S ribosomal protein L10-like [Benincasa hispida]	[more]
XP_004137249.1	3.5e-123	96.36	60S ribosomal protein L10 [Cucumis sativus] >KAE8649248.1 hypothetical protein C...	[more]
XP_022931333.1	1.8e-122	95.91	60S ribosomal protein L10-like [Cucurbita moschata] >XP_022985026.1 60S ribosoma...	[more]
XP_022942135.1	2.3e-122	95.48	60S ribosomal protein L10-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0004050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M5M7	4.2e-119	91.82	60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1	[more]
P93847	2.7e-118	93.52	60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1	[more]
Q9SPB3	7.9e-118	90.28	60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1	[more]
Q93VT9	2.2e-112	88.02	60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1	[more]
A2ZCQ7	3.8e-112	86.76	60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica OX=39946 GN=SC34 PE=2 ...	[more]

BLAST of Sed0004050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CWP6	2.0e-124	97.27	60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BT36	2.0e-124	97.27	60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103492967 PE=3 SV=1	[more]
A0A6J1J6Y1	8.5e-123	95.91	60S ribosomal protein L10-like OS=Cucurbita maxima OX=3661 GN=LOC111483117 PE=3 ...	[more]
A0A6J1EY90	8.5e-123	95.91	60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111437559 PE=...	[more]
A0A6J1FVN9	1.1e-122	95.48	60S ribosomal protein L10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Sed0004050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14320.1	1.6e-113	88.02	Ribosomal protein L16p/L10e family protein	[more]
AT1G26910.1	4.6e-113	88.43	Ribosomal protein L16p/L10e family protein	[more]
AT1G66580.1	2.3e-112	86.82	senescence associated gene 24	[more]
AT1G14320.2	8.5e-75	64.52	Ribosomal protein L16p/L10e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10	Ribosomal protein L10e/L16	coord: 15..229 e-value: 1.1E-116 score: 390.0
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 18..187
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 26..180 e-value: 1.3E-36 score: 125.5
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 55..180 e-value: 3.47387E-45 score: 144.942
IPR001197	Ribosomal protein L10e	TIGRFAM	TIGR00279	TIGR00279	coord: 15..188 e-value: 2.0E-77 score: 256.7
IPR001197	Ribosomal protein L10e	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 15..231
None	No IPR available	PANTHER	PTHR11726:SF42	60S RIBOSOMAL PROTEIN L10-LIKE	coord: 15..231
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 122..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004050.1	Sed0004050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome