Sed0003999 (gene) Chayote v1

Overview


Name	Sed0003999
Type	gene
Organism	Sechium edule (Chayote v1)
Description	PLATZ transcription factor family protein
Location	LG02: 43611453 .. 43613589 (+)
RNA-Seq Expression	Sed0003999
Synteny	Sed0003999

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCCATCTCTCGTGAAATCCCAAAAAAAAAAAAAAACAGAGAGTTATGATAATTATGCAAAATTTCACATTTTTTTCCATTACCATTTCCATTTGAATTTTTATATATATATATTATGGTAAGCCAAACAAAATAATTTCACATTCTTGTACTTTTTCTCCTCTGTTTTTCTCCCATTTGTATAATTGACTAAATTTTGGTAGATGAAGCAAAAATCAGTAATGTCGGCGGCGGCGCCGCCGTGGCTGGAGCCACTATTGACGACGGCGTTCTTCTCCATCTGCCACACGCACGGCGACGCGGCGCGGAGCGAGCGGAACATGTACTGCCTGGATTGCCACTGCGAAGCATTTTGCTTCTATTGCCGGTCGGCTCACCACAAGGAGCATCAAGTGATTCAGGTTTCAAAAAAATTTTGATTTTTTTTTTTTTTTGAAATTTGGAAATTTGGGATATGGGTTTTGTCAAGCATTGACTAAGATGAAATGGGTTGGTTTTGGAATTGCGAAATTGGATTTAGATTCGGAGATCTTCGTATCATGATGTGGTGAGAGTTGCAGAGATTGAAGATGCTTTGGATATCAGTGGAGTGCAAACTTATGTGATTAATAGTGCCAGAGTTGTGTTCTTGAATGAGAGGCCTCAGCCTAAGGCTGGAAAAAGTGGAGTTCATATTTGTGAGATTTGTGCCAGAAGCTTGTTGGATCCTTTTCGTTTCTGTTCACTTGGATGTAAGGTTAGTAATTAGTAATTACCACTTTTTTTTTTTTTTTTTTTAGTTTTCACCATTCATAATTCACGATGACTTAAATTGCCCATCACTCACACATCATCACCCACTTTTTCTTTTCCACTCTCCCTTTCATCATCACTTTGCATTGCCATCAAAATTTGAAGGGGTTTTCAGAACAAAAATGAGATCAAAAGATTGCAAAACTTTAAGGGGACAACTTTTTTTAATCAAAAGATTGGAGGAGGCTATTTGAACCCTTGGCCAATATTTTGGATCAATATTTGGGAGATGATTTGAATTCAATGCTTACATTTGAGTCATGTTTTTATTGAGAGGTTGAATTTAGCTAGATCAATATTTTAACACTTCCATTTTTTTTTCTTCACGTTTATGTTTATGCATATCAATTGTCGGATCTTATAATATTTGGTTGTTAAAGAAATTTATAGGAAATTATTTATCAGATTGGTAATTATCATGGAAAAGAGGTAGAATTCCAATGTCATTAGGTATCACTTAGTAAATAAATGGTTACGAGTTCGAGTCCCAAGATTGTTAAATTAAACTAATAATTTCATAAATCGGTTAGTTTTTACCCTTAGACCAATGTATGATAGTTACCTGTGCCTTTTATAAGTTAAATCTTAAAAAATTATCAACAGCCATTTACTAAGAATTTGAATACATAAACTTATATTTTAATATCGACACTTCAAATTCAATTTGAGTAAATTTAATGACATCCACATTTCAACCTCAAATGGTGAATTTTGGGTATAAAATTTTATTTAAATTTTGTTGATTTATATAGCTTGTAGGGGTGAAGAGAAATGGGGATGCAAACTTTAGCTTGGAGATGAAGAAAGAAGCATTGGTAATGGAAAGAAGAGAAGGAATTTCATCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGGTCCTAATTATTGCCTTTAAAACCAATTCTTTGAAGGCTTTGATCATTCTACACACCATAATTTGGGGTATTTGTCCATAAAATTATAGGGCACTAAAGGTGGGGGTGTCCCTAAAAATAAAAATTTTCAAATTTTTTTTTTTTACAGGGGTATAGGGAAAGAAGGTTTTCTCTTTCTAAGCTTGGGTCCCATATACAACAAATTCTATCTTGAGGATGTGAAGAAGCAATAATGGAGGAATTGTTATGTTGATAATTGCGAGGTGTATATTTGTTTATTGAGAAATTAAATTTCAAAAAAAATGAAAAAGAAAAAAGGAGAAGAACATGTCTTGTGGAGTCCGTTTCATAGTTTTCTGGGGCCCACCGACCACATGGGCCGTTTATATAAATAAATACTTTAATTGTATTTTATTATATTTTTTTTATGGTTAAACAACCATATTCATCTTTATTTAATT

mRNA sequence

TTGCCATCTCTCGTGAAATCCCAAAAAAAAAAAAAAACAGAGAGTTATGATAATTATGCAAAATTTCACATTTTTTTCCATTACCATTTCCATTTGAATTTTTATATATATATATTATGATGAAGCAAAAATCAGTAATGTCGGCGGCGGCGCCGCCGTGGCTGGAGCCACTATTGACGACGGCGTTCTTCTCCATCTGCCACACGCACGGCGACGCGGCGCGGAGCGAGCGGAACATGTACTGCCTGGATTGCCACTGCGAAGCATTTTGCTTCTATTGCCGGTCGGCTCACCACAAGGAGCATCAAGTGATTCAGATTCGGAGATCTTCGTATCATGATGTGGTGAGAGTTGCAGAGATTGAAGATGCTTTGGATATCAGTGGAGTGCAAACTTATGTGATTAATAGTGCCAGAGTTGTGTTCTTGAATGAGAGGCCTCAGCCTAAGGCTGGAAAAAGTGGAGTTCATATTTGTGAGATTTGTGCCAGAAGCTTGTTGGATCCTTTTCGTTTCTGTTCACTTGGATGTAAGCTTGTAGGGGTGAAGAGAAATGGGGATGCAAACTTTAGCTTGGAGATGAAGAAAGAAGCATTGGTAATGGAAAGAAGAGAAGGAATTTCATCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGGTCCTAATTATTGCCTTTAAAACCAATTCTTTGAAGGCTTTGATCATTCTACACACCATAATTTGGGGGGTATAGGGAAAGAAGGTTTTCTCTTTCTAAGCTTGGGTCCCATATACAACAAATTCTATCTTGAGGATGTGAAGAAGCAATAATGGAGGAATTGTTATGTTGATAATTGCGAGGTGTATATTTGTTTATTGAGAAATTAAATTTCAAAAAAAATGAAAAAGAAAAAAGGAGAAGAACATGTCTTGTGGAGTCCGTTTCATAGTTTTCTGGGGCCCACCGACCACATGGGCCGTTTATATAAATAAATACTTTAATTGTATTTTATTATATTTTTTTTATGGTTAAACAACCATATTCATCTTTATTTAATT

Coding sequence (CDS)

ATGATGAAGCAAAAATCAGTAATGTCGGCGGCGGCGCCGCCGTGGCTGGAGCCACTATTGACGACGGCGTTCTTCTCCATCTGCCACACGCACGGCGACGCGGCGCGGAGCGAGCGGAACATGTACTGCCTGGATTGCCACTGCGAAGCATTTTGCTTCTATTGCCGGTCGGCTCACCACAAGGAGCATCAAGTGATTCAGATTCGGAGATCTTCGTATCATGATGTGGTGAGAGTTGCAGAGATTGAAGATGCTTTGGATATCAGTGGAGTGCAAACTTATGTGATTAATAGTGCCAGAGTTGTGTTCTTGAATGAGAGGCCTCAGCCTAAGGCTGGAAAAAGTGGAGTTCATATTTGTGAGATTTGTGCCAGAAGCTTGTTGGATCCTTTTCGTTTCTGTTCACTTGGATGTAAGCTTGTAGGGGTGAAGAGAAATGGGGATGCAAACTTTAGCTTGGAGATGAAGAAAGAAGCATTGGTAATGGAAAGAAGAGAAGGAATTTCATCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGGTCCTAA

Protein sequence

MMKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHHKEHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHICEICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRAPFGS

Homology

[Close]

BLAST of Sed0003999 vs. NCBI nr
Match: XP_022144595.1 (uncharacterized protein LOC111014242 isoform X1 [Momordica charantia])

HSP 1 Score: 348.2 bits (892), Expect = 4.3e-92
Identity = 167/184 (90.76%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MMKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHH 60
           MMKQKS+MS  APPWLEPLL TAFFSICHTHGDAARSERNMYCLDCH +AFCFYCRS+HH
Sbjct: 1   MMKQKSIMS--APPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHH 60

Query: 61  KEHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHIC 120
            +HQVIQIRRSSYHDVVRVAEIED+LDISGVQTYVINSARV+FLNERPQPKAGK G HIC
Sbjct: 61  NDHQVIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHIC 120

Query: 121 EICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRA 180
           EIC RSLLDPFRFCSLGCKLVGVKRNGDA F LE KKEALVMERREGISSRRRKGIPHRA
Sbjct: 121 EICGRSLLDPFRFCSLGCKLVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRA 180

Query: 181 PFGS 185
           PFGS
Sbjct: 181 PFGS 182

[Close]

BLAST of Sed0003999 vs. NCBI nr
Match: XP_022144597.1 (uncharacterized protein LOC111014242 isoform X2 [Momordica charantia])

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91
Identity = 166/183 (90.71%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 2   MKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHHK 61
           MKQKS+MS  APPWLEPLL TAFFSICHTHGDAARSERNMYCLDCH +AFCFYCRS+HH 
Sbjct: 1   MKQKSIMS--APPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHN 60

Query: 62  EHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHICE 121
           +HQVIQIRRSSYHDVVRVAEIED+LDISGVQTYVINSARV+FLNERPQPKAGK G HICE
Sbjct: 61  DHQVIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICE 120

Query: 122 ICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRAP 181
           IC RSLLDPFRFCSLGCKLVGVKRNGDA F LE KKEALVMERREGISSRRRKGIPHRAP
Sbjct: 121 ICGRSLLDPFRFCSLGCKLVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRAP 180

Query: 182 FGS 185
           FGS
Sbjct: 181 FGS 181

[Close]

BLAST of Sed0003999 vs. NCBI nr
Match: XP_038903534.1 (uncharacterized protein LOC120090101 isoform X1 [Benincasa hispida])

HSP 1 Score: 345.5 bits (885), Expect = 2.8e-91
Identity = 166/184 (90.22%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MMKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHH 60
           MMKQKSVMS  APPWLEPLLTT FFSICHTHGDAARSERNMYCLDCH +AFCFYCRS+HH
Sbjct: 1   MMKQKSVMS--APPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHH 60

Query: 61  KEHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHIC 120
            +HQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARV+FLNERPQPKAGK G HIC
Sbjct: 61  NDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHIC 120

Query: 121 EICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRA 180
           EIC RSLLDPFRFCSLGCKLVGVKRNGDA+F+LE KKEA+ +ERREGISSRRRKGIPHRA
Sbjct: 121 EICGRSLLDPFRFCSLGCKLVGVKRNGDASFNLEAKKEAMGIERREGISSRRRKGIPHRA 180

Query: 181 PFGS 185
           PFGS
Sbjct: 181 PFGS 182

[Close]

BLAST of Sed0003999 vs. NCBI nr
Match: XP_038903535.1 (uncharacterized protein LOC120090101 isoform X2 [Benincasa hispida])

HSP 1 Score: 344.0 bits (881), Expect = 8.2e-91
Identity = 165/183 (90.16%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 2   MKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHHK 61
           MKQKSVMS  APPWLEPLLTT FFSICHTHGDAARSERNMYCLDCH +AFCFYCRS+HH 
Sbjct: 1   MKQKSVMS--APPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHN 60

Query: 62  EHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHICE 121
           +HQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARV+FLNERPQPKAGK G HICE
Sbjct: 61  DHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICE 120

Query: 122 ICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRAP 181
           IC RSLLDPFRFCSLGCKLVGVKRNGDA+F+LE KKEA+ +ERREGISSRRRKGIPHRAP
Sbjct: 121 ICGRSLLDPFRFCSLGCKLVGVKRNGDASFNLEAKKEAMGIERREGISSRRRKGIPHRAP 180

Query: 182 FGS 185
           FGS
Sbjct: 181 FGS 181

[Close]

BLAST of Sed0003999 vs. NCBI nr
Match: XP_022951161.1 (uncharacterized protein LOC111454064 isoform X1 [Cucurbita moschata] >XP_023005194.1 uncharacterized protein LOC111498296 isoform X1 [Cucurbita maxima] >XP_023540022.1 uncharacterized protein LOC111800522 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6596518.1 hypothetical protein SDJN03_09698, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 344.0 bits (881), Expect = 8.2e-91
Identity = 162/184 (88.04%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MMKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHH 60
           MMKQKS+   +APPWLEPLL TAFFSICHTHG++ARSERNMYCLDCHC+AFCFYCRS+HH
Sbjct: 1   MMKQKSM---SAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHH 60

Query: 61  KEHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHIC 120
           K+HQVIQIRRSSYHDVVRVA+IE+ALDISGVQTYVINSARV+FLNERPQPKAGK G HIC
Sbjct: 61  KDHQVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHIC 120

Query: 121 EICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRA 180
           EIC RSLLDPFRFCSLGCKLVG+ RNGDA+FSLE KKEA+VMERREGISSRRRKGIPHRA
Sbjct: 121 EICGRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRA 180

Query: 181 PFGS 185
           PFGS
Sbjct: 181 PFGS 181

[Close]

BLAST of Sed0003999 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-27
Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 8   MSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHHKEHQVIQ 67
           M    P WL+ L    FF  C  H  A ++ERN+ CLDC C + C +C  + H+ H+++Q
Sbjct: 1   MGIQKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDC-CTSLCPHCVPS-HRFHRLLQ 60

Query: 68  IRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHICEICARSL 127
           +RR  YHDVVR+ +++  +D S VQ Y INSA+VVF+ +RPQ +  K   + C  C RSL
Sbjct: 61  VRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSL 120

Query: 128 LDPFRFCSLGCKL 141
            +P+  CSLGCK+
Sbjct: 121 QEPYIHCSLGCKV 131

[Close]

BLAST of Sed0003999 vs. ExPASy Swiss-Prot
Match: P0CB19 (Uncharacterized protein At3g50808 OS=Arabidopsis thaliana OX=3702 GN=At3g50808 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-05
Identity = 34/110 (30.91%), Postives = 52/110 (47.27%), Query Frame = 0


Query: 86  LDISGVQTYVINSARVVFLNER---PQPKAGKSGVHICEICARSL--LDPFRFCSLGCKL 145
           +DISG+  Y IN   +V++N+R      ++  + +H C+IC   +       FCS+ CK 
Sbjct: 5   MDISGIHLYSINGFPIVYINQRRGNNNHRSRSNVMHKCKICEWEIDAASSALFCSMECKF 64

Query: 146 VGV--------KRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRAPF 183
             V          N      +  + +  VM++R      RRKG PHRAPF
Sbjct: 65  RSVLGSQLDELMENSSEVTEISEEIDEPVMKKR-----HRRKGSPHRAPF 109

[Close]

BLAST of Sed0003999 vs. ExPASy TrEMBL
Match: A0A6J1CS33 (uncharacterized protein LOC111014242 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014242 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 167/184 (90.76%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MMKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHH 60
           MMKQKS+MS  APPWLEPLL TAFFSICHTHGDAARSERNMYCLDCH +AFCFYCRS+HH
Sbjct: 1   MMKQKSIMS--APPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHH 60

Query: 61  KEHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHIC 120
            +HQVIQIRRSSYHDVVRVAEIED+LDISGVQTYVINSARV+FLNERPQPKAGK G HIC
Sbjct: 61  NDHQVIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHIC 120

Query: 121 EICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRA 180
           EIC RSLLDPFRFCSLGCKLVGVKRNGDA F LE KKEALVMERREGISSRRRKGIPHRA
Sbjct: 121 EICGRSLLDPFRFCSLGCKLVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRA 180

Query: 181 PFGS 185
           PFGS
Sbjct: 181 PFGS 182

[Close]

BLAST of Sed0003999 vs. ExPASy TrEMBL
Match: A0A6J1CU41 (uncharacterized protein LOC111014242 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014242 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.1e-92
Identity = 166/183 (90.71%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 2   MKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHHK 61
           MKQKS+MS  APPWLEPLL TAFFSICHTHGDAARSERNMYCLDCH +AFCFYCRS+HH 
Sbjct: 1   MKQKSIMS--APPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHN 60

Query: 62  EHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHICE 121
           +HQVIQIRRSSYHDVVRVAEIED+LDISGVQTYVINSARV+FLNERPQPKAGK G HICE
Sbjct: 61  DHQVIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICE 120

Query: 122 ICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRAP 181
           IC RSLLDPFRFCSLGCKLVGVKRNGDA F LE KKEALVMERREGISSRRRKGIPHRAP
Sbjct: 121 ICGRSLLDPFRFCSLGCKLVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRAP 180

Query: 182 FGS 185
           FGS
Sbjct: 181 FGS 181

[Close]

BLAST of Sed0003999 vs. ExPASy TrEMBL
Match: A0A6J1KYH1 (uncharacterized protein LOC111498296 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498296 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.9e-91
Identity = 162/184 (88.04%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MMKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHH 60
           MMKQKS+   +APPWLEPLL TAFFSICHTHG++ARSERNMYCLDCHC+AFCFYCRS+HH
Sbjct: 1   MMKQKSM---SAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHH 60

Query: 61  KEHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHIC 120
           K+HQVIQIRRSSYHDVVRVA+IE+ALDISGVQTYVINSARV+FLNERPQPKAGK G HIC
Sbjct: 61  KDHQVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHIC 120

Query: 121 EICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRA 180
           EIC RSLLDPFRFCSLGCKLVG+ RNGDA+FSLE KKEA+VMERREGISSRRRKGIPHRA
Sbjct: 121 EICGRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRA 180

Query: 181 PFGS 185
           PFGS
Sbjct: 181 PFGS 181

[Close]

BLAST of Sed0003999 vs. ExPASy TrEMBL
Match: A0A6J1GGT0 (uncharacterized protein LOC111454064 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454064 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.9e-91
Identity = 162/184 (88.04%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MMKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHH 60
           MMKQKS+   +APPWLEPLL TAFFSICHTHG++ARSERNMYCLDCHC+AFCFYCRS+HH
Sbjct: 1   MMKQKSM---SAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHH 60

Query: 61  KEHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHIC 120
           K+HQVIQIRRSSYHDVVRVA+IE+ALDISGVQTYVINSARV+FLNERPQPKAGK G HIC
Sbjct: 61  KDHQVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHIC 120

Query: 121 EICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRA 180
           EIC RSLLDPFRFCSLGCKLVG+ RNGDA+FSLE KKEA+VMERREGISSRRRKGIPHRA
Sbjct: 121 EICGRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRA 180

Query: 181 PFGS 185
           PFGS
Sbjct: 181 PFGS 181

[Close]

BLAST of Sed0003999 vs. ExPASy TrEMBL
Match: A0A6J1CTQ1 (uncharacterized protein LOC111014242 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111014242 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.3e-90
Identity = 163/180 (90.56%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 5   KSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHHKEHQ 64
           KS+MS  APPWLEPLL TAFFSICHTHGDAARSERNMYCLDCH +AFCFYCRS+HH +HQ
Sbjct: 2   KSIMS--APPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHNDHQ 61

Query: 65  VIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHICEICA 124
           VIQIRRSSYHDVVRVAEIED+LDISGVQTYVINSARV+FLNERPQPKAGK G HICEIC 
Sbjct: 62  VIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICG 121

Query: 125 RSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISSRRRKGIPHRAPFGS 184
           RSLLDPFRFCSLGCKLVGVKRNGDA F LE KKEALVMERREGISSRRRKGIPHRAPFGS
Sbjct: 122 RSLLDPFRFCSLGCKLVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRAPFGS 179

[Close]

BLAST of Sed0003999 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein )

HSP 1 Score: 212.2 bits (539), Expect = 3.5e-55
Identity = 111/192 (57.81%), Postives = 131/192 (68.23%), Query Frame = 0


Query: 13  PPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHHKEHQVIQIRRSS 72
           P WLE LL T FFSIC  H +  R+E NM+CL C   AFCFYCRS+ H +H V+QIRRSS
Sbjct: 4   PKWLEGLLRTNFFSICPRHRETPRNECNMFCLSCQNAAFCFYCRSSFHIDHPVLQIRRSS 63

Query: 73  YHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGV---------HICEIC 132
           YHDVVRV+EIE+ALDI GVQTYVINSARV+FLNERPQPK    G          + CE C
Sbjct: 64  YHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMSYFCETC 123

Query: 133 ARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGI-----------SSRR 185
            R+LLDPFRFCSLGCK+ G+++N       E ++E L  ER++             +SRR
Sbjct: 124 CRTLLDPFRFCSLGCKVEGMRKN------KEEEEERLRKERQQETHKGTHPPTHTSNSRR 183

[Close]

BLAST of Sed0003999 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-48
Identity = 102/201 (50.75%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 13  PPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHHKEHQVIQIRRSS 72
           PPWL+PLL   FF  C  HGD+ +SE NMYCLDC     C  C  AHHK+H+ IQIRRSS
Sbjct: 34  PPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLC-LAHHKDHRTIQIRRSS 93

Query: 73  YHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHICEICARSLL-DPF 132
           YHDV+RV EI+  LDI G+QTYVINSA+VVFLNERPQP+ GK   + C++C RSL+ D F
Sbjct: 94  YHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCKVCYRSLVDDSF 153

Query: 133 RFCSLGCKLVGVKRNGDANFSLEMKKEALVMERREGISS--------------------- 184
           RFCSLGCK+ G  R        E  +E L+ME  +  SS                     
Sbjct: 154 RFCSLGCKIAGTSR------GFEKGRENLLMETEDSSSSIAIGKNITNLQSFSPSTPPLT 213

[Close]

BLAST of Sed0003999 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 189.1 bits (479), Expect = 3.1e-48
Identity = 101/197 (51.27%), Postives = 125/197 (63.45%), Query Frame = 0


Query: 13  PPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHHKEHQVIQIRRSS 72
           P WL+PLL   FF  C  H D+ +SE NMYCLDC     C  C S  HK+H  IQIRRSS
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLS-FHKDHHAIQIRRSS 71

Query: 73  YHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHICEICARSLLDPFR 132
           YHDV+RV+EI+  LDI+GVQTYVINSA+VVFLNERPQP+ GK  ++ CE+C RSL+D FR
Sbjct: 72  YHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRSLVDSFR 131

Query: 133 FCSLGCKLVGVKR-----------NGDANFSL----EMKKEALVMERREGIS-------- 184
           FCSLGCK+ G+ +           + D ++S      +KK   +M      S        
Sbjct: 132 FCSLGCKISGISKKKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFTPSTPPLSAVN 191

[Close]

BLAST of Sed0003999 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein )

HSP 1 Score: 186.4 bits (472), Expect = 2.0e-47
Identity = 89/144 (61.81%), Postives = 107/144 (74.31%), Query Frame = 0


Query: 13  PPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHHKEHQVIQIRRSS 72
           PPWL P+L   +F  C  H  + +SE NM+CLDC  EAFC YC   +H+ H+V+QIRRSS
Sbjct: 18  PPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYC-LLNHRNHRVLQIRRSS 77

Query: 73  YHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHICEICARSLLDPFR 132
           YH+VVRV EI+  +DIS VQTY+INSAR+VFLNERPQP+ GK   + CEIC RSLLD FR
Sbjct: 78  YHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRSLLDSFR 137

Query: 133 FCSLGCKLVGVKRNGDANFSLEMK 157
           FCSLGCKL G+KR+    FSL  K
Sbjct: 138 FCSLGCKLGGMKRDPSLTFSLRGK 160

[Close]

BLAST of Sed0003999 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 85/156 (54.49%), Postives = 114/156 (73.08%), Query Frame = 0


Query: 1   MMKQKSVMSAAAPPWLEPLLTTAFFSICHTHGDAARSERNMYCLDCHCEAFCFYCRSAHH 60
           M++ +      +PPWL P+L  ++F  C  H D+ ++E N++CLDC   AFC YC    H
Sbjct: 4   MIRTEEEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYC-LVKH 63

Query: 61  KEHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVVFLNERPQPKAGKSGVHIC 120
           K+H+V+QIRRSSYH+VVRV EI+  +DI+ VQTY+INSA++VFLNERPQP+ GK   + C
Sbjct: 64  KDHRVVQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTC 123

Query: 121 EICARSLLDPFRFCSLGCKLVGVKRNGDANFSLEMK 157
           EIC RSLLD FRFCSLGCKL G++R GD + +  +K
Sbjct: 124 EICCRSLLDSFRFCSLGCKLGGMRR-GDLSLTFSLK 157

The following BLAST results are available for this feature:

BLAST of Sed0003999 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144595.1	4.3e-92	90.76	uncharacterized protein LOC111014242 isoform X1 [Momordica charantia]	[more]
XP_022144597.1	1.3e-91	90.71	uncharacterized protein LOC111014242 isoform X2 [Momordica charantia]	[more]
XP_038903534.1	2.8e-91	90.22	uncharacterized protein LOC120090101 isoform X1 [Benincasa hispida]	[more]
XP_038903535.1	8.2e-91	90.16	uncharacterized protein LOC120090101 isoform X2 [Benincasa hispida]	[more]
XP_022951161.1	8.2e-91	88.04	uncharacterized protein LOC111454064 isoform X1 [Cucurbita moschata] >XP_0230051...	[more]

BLAST of Sed0003999 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	2.3e-27	44.36	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P0CB19	2.4e-05	30.91	Uncharacterized protein At3g50808 OS=Arabidopsis thaliana OX=3702 GN=At3g50808 P...	[more]

BLAST of Sed0003999 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CS33	2.1e-92	90.76	uncharacterized protein LOC111014242 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CU41	6.1e-92	90.71	uncharacterized protein LOC111014242 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1KYH1	3.9e-91	88.04	uncharacterized protein LOC111498296 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GGT0	3.9e-91	88.04	uncharacterized protein LOC111454064 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CTQ1	3.3e-90	90.56	uncharacterized protein LOC111014242 isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0003999 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27930.1	3.5e-55	57.81	PLATZ transcription factor family protein	[more]
AT4G17900.1	1.8e-48	50.75	PLATZ transcription factor family protein	[more]
AT1G32700.1	3.1e-48	51.27	PLATZ transcription factor family protein	[more]
AT1G76590.1	2.0e-47	61.81	PLATZ transcription factor family protein	[more]
AT1G21000.1	1.1e-45	54.49	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 68..139 e-value: 4.8E-29 score: 100.8
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 10..180
None	No IPR available	PANTHER	PTHR31065:SF69	SUBFAMILY NOT NAMED	coord: 10..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003999.1	Sed0003999.1	mRNA
Sed0003999.2	Sed0003999.2	mRNA
Sed0003999.3	Sed0003999.3	mRNA
Sed0003999.4	Sed0003999.4	mRNA