Sed0003509 (gene) Chayote v1

Overview


Name	Sed0003509
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein YIP
Location	LG05: 3933296 .. 3938734 (+)
RNA-Seq Expression	Sed0003509
Synteny	Sed0003509

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAATTGCTCAACGACGACGTTTAAAGCGTAACCTCCATGGAAACGCCATTAACAGAACTCTTGTTCTTGATTTCTCGAAGAACAAAAATCTCACAACTCCCAATTGGGATCTGATCATCATTCATCATCTTCTCCAATTCTCATCACTTTCCCGAGAAAATTCCCTTTCCGGGAAAATGTCGCACAGCGATACAATTCCGCTCAACCAATCCTCCCAATCGGACATCGACGAGATCGAGAATCTCATCCACTCCAGCGTCCAATCCGGCCCTTCCACCGTTCTTCCGGCCCGCCCTCCAAGTCCGCCTCGAGCTTCCATCCCCGTTTCGTCCTCCCCGTTCATCCACTCCAATCTCCCCCCTCTCCCCTCCAAATCCGCTGCCCAGAAGCCGCCGCTGCCGCCCTCCGTCTTCCCTTCTCCGCCGCCGCTCCCCGTCTCCGATCCCTCCTCCACCGGCTTCGGATCGCCGCCCAATACCCTCACCGAACCGGTCTGGGATACGGTCAAGCGGGATCTGTCCCGGATCGTTAGCAATTTGAAGCTCGTGGTGTTTCCCAACCCGTTCCGTGAGGACCCTGGAAAGTCTTTGAGGGATTGGGATCTTTGGGGGCCTTTCTTCTTCATTGTGTTCCTTGGTCTCGTTCTTTCCTGGTCTGCATCGGTTAAGAAGGTTAGCTTCGTATTGTTTGAGTTTGTTTAAATCGTTTATTGCCCGTGTATTACTTTTTTCTTACAATGCGATGCTTTGGTTCGGGTTAAACTAGCTATCTGCAATTATTTAGATTGTTTAATTCGAGTCGAACTCATTGTTGGAAGTCTAATGTAGTTCTTTTAGCAGTTTCAAATTTGCAACTCTGGGTATCCAGTACTTTTGTTTAGATCTCTCGAAACTGCATTGGCTAGTATGTTTTATTGGATATTAGCACGACCCGCCAGTTCTAGACACTTGGAACATGCCAGAAACCGTCCTCAAGGGGTACGGTTGAAGATTTGAGTTTTGAAGGTATGCTCCCCACAAGGTGTCAGGTTCGAGACTTACTTGTAACATTAACTTGTAGACAACTCCCGTGTCTTCATTCCTTCGATGTCTCGCGGTGCCTGACCTAGGGACGGGTGTGGTTACCCTGGTTATAGTGGAGCAAAGCTCCAATTTCCTGGTTTCCAAAAAAAAAAAGAATATGCCAGAAACTAGTGGAACATGTACTAGCTTCTATCGATGTCTGAAAGCTAATTGACTAGATGTAAAAGCTTAGTGTATAGCTCGGTTAACTGCATAATTAAAGATAAAGTAGGTTTTAATGGTTTGTAGGACGCACACTTTTATCTATCTGCTTGAATAAAGTATTGATCTTCAGTAGAATCGATGCATTACATTGCATTATAAATTTTATGAGAAAATATTTAGCAGAGGAAATGTAGATAAGGACTGTCAAGATTTCCATTTCTAAATCATTAATCCAAGATAGCCGTATTGTTACTCTGATATGCCAATAAGAGGAATAGCTTAGCAACATAAGTGTGTGCCAATGAACCAAGATGATGTGAATTCGAATCCTCCCACCACCAATTGTTGTTGAACTAAATAAAAAATGGTTACTCTGATATGAAAAAATACAATGTCATACAGAATCCTTCGATAGAAATAACATCTGGTTTTTTTAAGGCAGGGGTTATTGTTCCCTAGGACATTCACATCTACAACTATGGATGGTAGACCAAGGTGTATTACCCTACTTTAGTTATAAATTAACTACCGAGAAATTTAGAATTTGTCAAAATTCAAAGCTAGTTCTTATAGTTTTTGTGTTATTTCACAATATTTGATTATACTGAGTTATTATTCCCTACTAACTCTTTCTATAGTATCTACTTGTGAAGCTGGATTTGAATTCGTTGGTGCATTTCTCTTATAAAAACGTTTTATTTGTTTCATTAGCTTGTACCTACCATTCACTGCTTTGAACCTGAAATACTTCACTAAAAGTGGGCTGTTATCTTCAAAAATAAATAGAATATGGGTTTCTAGCTGAAAAGTAGTTTAGGGTTCAAAGAAAAAATTCCTTTTTGGTAAAATAAAATTTATTCAAGTTTTGGAAGTTTAAGACTTCATGAATTGCAATTGTTCCTGTGATTATACCTGGGGCCTGGGCAACAGATGTATGACTATGAGAGGATACATAGGAGATATCCGAGGATTTCAATCAATCCCAGCTGGTGTTGTGTGGCCAATGTAGGAAGAATGCTGGAGACCACCTGTTTTAAGTGTGATTTACTTTAAAGAGCTTTGATCCTCTTCAATTCTATTGGTGTACCTGGTGGGTGTCGTGCCATTCTTGCAGTAGATTTTGTTCTGGTTGATCCTCAAAGTGAATAAGGAAATATTTTGGAAAATTTTGCTAGCAAGAGCAATAGTTTAGCCAGCATAAGTGTGTGCCCATGACCAAAAGGTCATGGGTTCGAATCTCCTCACCCCCAATTGTGTTCAACTAAAAAATATTTAGGAAAATTTTATGATGTGTAGCAATTTTAGAGAGAATGGTACACAAGAATTGAGGAGTTGCATAGAGACTCTTATCAATTCAATTATGCAAATAGAGTTTTTTGTTCTTGCCTGTAGATGGTGTACTCTGGACAAAGGCTTTTTGTAATTATTCTTCCTTTGGAACACCTTCTTGTTGAATGGGTTTCTTGTCTCACACATCTGTCTTGCACTCTTTTGTTCTTATCTATGAACTTTCTTGGGTGTATGTATATGTTGGCAAAATAATCAGATCAGTCTAGTCTGCTCACGTTTATCCCCCTTTCTTTAGGAATGTTGGATCAAGCTATTAAACTTCTTTCCCTAATCCCACTTCCTGCTGAAACAGGGAGAAGCATTTCTCTTTGAGAGAATGGAATCTAGATACCAGTGAAGTAGATTTGAATGTCCAAAAATTGTCTCAATTGCATTGTTCCTTGCATTTTACGATATCAGATAATTTAAGAGTAGCCAACTAGCCATATAATTCTATATTAAGATAAAGTTTGATATAGATCTGACCGTGATATTTAGCTTAAATATCTTATACCGGATGTATGTATGTATGTATCAGAAATAACTTATAAGTTGTCCTTATTTATGATATGCAATGCATTTTTTTAGGGGGATAAGAAACAAACACAATCCAGATGTATGATAAAATATCCTTACAAACATGTTGGTTCCGATACTCCACAATCACCTTAACATTTAAAACATTTTAGCCATTCTCTATTCGATGTTTTTATTCTCATTCTTCAATTTCTACTATTGTTGAATTATCATTGATACAAGAAAAAGCTTTTAAAATTTTGTTGGTATCCTACTAATGGTGGATATGAATTAATTTTCTTTTCAGTCTGAGGTGTTTGCTGTTGCATTTGCACTTCTTGCTGCTGGTGCAGTGATTCTGACCTTGAATGTGCTTCTCCTGGTAACTAAATCTCCCTTTCATTCTTCTCCCTGCTCCCTTCCCACTCCCAACCCATTCAAGGGCATAATTTAATCATCAGTTTTATTTTGTCTATTAGAAAATAGGGTTGATACTTATCCAATTTTTTTACTTTGTTGCCTTGTTGCCCGTGTTCAGTGTTTGAACTTTGGAGTGTAAGAGTTGGAACTTGGATCTAGTGTTATCTGGTTCTCGTTATGGTTTTGATCAATTTTTATTTTTCTCAACCAAACACATCACACAATTGCAGTATGGTTAAAGATACCCTGTACTAAAACTCTTACAAAAATGCCTTAGTTCCTTGTTGCCTAATGTGACAGATAATTTTTTCTCTGAGTTCACATTGGTAATTGCACTATTTTAACATATGGGTTCATCTCCTTTGTTTGACTCTTTCACCCAAAACTCTCGTATAGACATAGAGAAATATGTAAATGAGACAAACAGGGATGATTTGAAGGGTTATAATAAGTCTTATGATGGGGAGACTTATTTAGTGACGATGAGTATCAATTGTAGATCTTTGCTGTGTGATTTTTTATAATCTCATTCTTGTTGAAACTTGAAAGACCCCTTACACTTTTGTTTTTTGTTTTTCTTTTTAAATTCCTTAAAAGAAAATAAAGTTTCCATTGACGAGGTGAAATGTTACAAATAAAGGAGTATTAAAGAGAAACAAAACTTGGGAATCCCAAACTATGAGCTTGATAAAATTAGGTTTCGTTGGAGATAATCACTTTGTGGCATTTGTCTCACTTTGGAAATGTGAGGTGTTTTCAATATTTATAAGAGATGTGGGTTACTCCCTTCACAATTAATTGGTTTTGAGATGAAACCTCATATTATCTAATATGATATCAAAGTTTTATGTGGGTTATTGGTCTCCAAATTTCGATCCGATCCAAGCGGGTGAATTGAACTCAAACCAAGCAGGCATAAGCTTAACTAGGTATTTGATTCCAAAATTAGGATCCAACCCAAGTGAGTAAAGCCAAAACGGGTATTTTGATTGATAAATTTGGATTTAATTCAAGATGGTCTTCCCTATATGACACCATCTTGAGGGAGCATGCCGGAGATAGATACTCAACTTGTGGTATTTGTCCCACATTAAAAATGTGAGGATGGGTTACCCCCCCCTCACAACCAATTGATTTTGAGGTGGAACCCCCTTATTATCTAATCATTGTTTGATGTCTGCAACAAATTGGTCATGGCCAGGATTTAGATATAAACGTTACTTAATGAGCTTCCATTCCTTCATATCCCTAAACTATATCCCACCTTGGTTTGCACAAAATAAGTGGGGACTGACTTCACTTTGATGATTGCAGGGTGGACATATAATTTTCTTCCAAAGCTTGAGTCTGTTGGGATATTGCCTGTTTCCTCTAGATATTGGAGCATTGATCTGCATGTTGAAGGACAATGTAATAGTGAAGATAGTTGTGGTATGTGTGACCTTGGCATGGAGTTCTTGGGCTGCATATCCTTTCATGAGCTCAGCAGTGAACCCAAGAAGAAAGGCTCTTGCACTCTATCCAGTGTTGCTCATGTATGTATCAGTTGGTTTTCTCATCATTGCCATTGATTGAGATATATATATTTATATATGCTTCAACAATAGTATCATGAAAATGGTTATTGATTGAGGTATATATGCTTCAACTCTTTTTTTCTTTTTCTTTTTTTTGACTTATATCGTCTATTCACTGGCTGCCAATTTTGTTAATGGAAATCCAGAACTGTGTAATATTTCTTGTAATTACGATGGCTTCATTTGTTTTCGGTTAATCATGATTAACCACAAGTTTTTGATAGACCTGATGTTGATGTCTTGAATTTTTAGAACTTGGTTGTGTAAATTGGTCAGAAAATAGTGCATGTGGGTCCTGACAAGAAATCAGAAATGTTGTAAATTTGTTTCTGGGAATTTGATATTTGGCAACATATTTGATTCTTTGAA

mRNA sequence

GTTAATTGCTCAACGACGACGTTTAAAGCGTAACCTCCATGGAAACGCCATTAACAGAACTCTTGTTCTTGATTTCTCGAAGAACAAAAATCTCACAACTCCCAATTGGGATCTGATCATCATTCATCATCTTCTCCAATTCTCATCACTTTCCCGAGAAAATTCCCTTTCCGGGAAAATGTCGCACAGCGATACAATTCCGCTCAACCAATCCTCCCAATCGGACATCGACGAGATCGAGAATCTCATCCACTCCAGCGTCCAATCCGGCCCTTCCACCGTTCTTCCGGCCCGCCCTCCAAGTCCGCCTCGAGCTTCCATCCCCGTTTCGTCCTCCCCGTTCATCCACTCCAATCTCCCCCCTCTCCCCTCCAAATCCGCTGCCCAGAAGCCGCCGCTGCCGCCCTCCGTCTTCCCTTCTCCGCCGCCGCTCCCCGTCTCCGATCCCTCCTCCACCGGCTTCGGATCGCCGCCCAATACCCTCACCGAACCGGTCTGGGATACGGTCAAGCGGGATCTGTCCCGGATCGTTAGCAATTTGAAGCTCGTGGTGTTTCCCAACCCGTTCCGTGAGGACCCTGGAAAGTCTTTGAGGGATTGGGATCTTTGGGGGCCTTTCTTCTTCATTGTGTTCCTTGGTCTCGTTCTTTCCTGGTCTGCATCGGTTAAGAAGTCTGAGGTGTTTGCTGTTGCATTTGCACTTCTTGCTGCTGGTGCAGTGATTCTGACCTTGAATGTGCTTCTCCTGGGTGGACATATAATTTTCTTCCAAAGCTTGAGTCTGTTGGGATATTGCCTGTTTCCTCTAGATATTGGAGCATTGATCTGCATGTTGAAGGACAATGTAATAGTGAAGATAGTTGTGGTATGTGTGACCTTGGCATGGAGTTCTTGGGCTGCATATCCTTTCATGAGCTCAGCAGTGAACCCAAGAAGAAAGGCTCTTGCACTCTATCCAGTGTTGCTCATGTATGTATCAGTTGGTTTTCTCATCATTGCCATTGATTGAGATATATATATTTATATATGCTTCAACAATAGTATCATGAAAATGGTTATTGATTGAGGTATATATGCTTCAACTCTTTTTTTCTTTTTCTTTTTTTTGACTTATATCGTCTATTCACTGGCTGCCAATTTTGTTAATGGAAATCCAGAACTGTGTAATATTTCTTGTAATTACGATGGCTTCATTTGTTTTCGGTTAATCATGATTAACCACAAGTTTTTGATAGACCTGATGTTGATGTCTTGAATTTTTAGAACTTGGTTGTGTAAATTGGTCAGAAAATAGTGCATGTGGGTCCTGACAAGAAATCAGAAATGTTGTAAATTTGTTTCTGGGAATTTGATATTTGGCAACATATTTGATTCTTTGAA

Coding sequence (CDS)

ATGTCGCACAGCGATACAATTCCGCTCAACCAATCCTCCCAATCGGACATCGACGAGATCGAGAATCTCATCCACTCCAGCGTCCAATCCGGCCCTTCCACCGTTCTTCCGGCCCGCCCTCCAAGTCCGCCTCGAGCTTCCATCCCCGTTTCGTCCTCCCCGTTCATCCACTCCAATCTCCCCCCTCTCCCCTCCAAATCCGCTGCCCAGAAGCCGCCGCTGCCGCCCTCCGTCTTCCCTTCTCCGCCGCCGCTCCCCGTCTCCGATCCCTCCTCCACCGGCTTCGGATCGCCGCCCAATACCCTCACCGAACCGGTCTGGGATACGGTCAAGCGGGATCTGTCCCGGATCGTTAGCAATTTGAAGCTCGTGGTGTTTCCCAACCCGTTCCGTGAGGACCCTGGAAAGTCTTTGAGGGATTGGGATCTTTGGGGGCCTTTCTTCTTCATTGTGTTCCTTGGTCTCGTTCTTTCCTGGTCTGCATCGGTTAAGAAGTCTGAGGTGTTTGCTGTTGCATTTGCACTTCTTGCTGCTGGTGCAGTGATTCTGACCTTGAATGTGCTTCTCCTGGGTGGACATATAATTTTCTTCCAAAGCTTGAGTCTGTTGGGATATTGCCTGTTTCCTCTAGATATTGGAGCATTGATCTGCATGTTGAAGGACAATGTAATAGTGAAGATAGTTGTGGTATGTGTGACCTTGGCATGGAGTTCTTGGGCTGCATATCCTTTCATGAGCTCAGCAGTGAACCCAAGAAGAAAGGCTCTTGCACTCTATCCAGTGTTGCTCATGTATGTATCAGTTGGTTTTCTCATCATTGCCATTGATTGA

Protein sequence

MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNLPPLPSKSAAQKPPLPPSVFPSPPPLPVSDPSSTGFGSPPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID

Homology

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BLAST of Sed0003509 vs. NCBI nr
Match: XP_038876122.1 (protein YIPF6 homolog [Benincasa hispida])

HSP 1 Score: 479.2 bits (1232), Expect = 2.4e-131
Identity = 256/281 (91.10%), Postives = 267/281 (95.02%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSHSDTIPL+QSSQSDIDEIENLI++SVQSGPSTVLPARPPSPPRASIPVSSSPF+ SNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQSGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPV-----SDPSSTGFGSPPNTLTEPVWDTVKRDLS 120
           PPLP KS+ QK   PP+VFP+PPPLPV     SD S++GFGSPPNTLTEPVWDTVKRDLS
Sbjct: 61  PPLPPKSSNQK---PPTVFPAPPPLPVSSNGRSDISASGFGSPPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180
           RIVSNLKLVVFPNPFREDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFAL
Sbjct: 121 RIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLALSWSASVKKSEVFAVAFAL 180

Query: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240
           LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNV+VKIVVVCVTLA
Sbjct: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLA 240

Query: 241 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           WSSWAAYPFMSSAVNPRRKALALYPV LMYVSVGFLIIAID
Sbjct: 241 WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Sed0003509 vs. NCBI nr
Match: XP_004143629.1 (protein YIPF6 homolog [Cucumis sativus] >KGN50415.1 hypothetical protein Csa_000333 [Cucumis sativus])

HSP 1 Score: 478.0 bits (1229), Expect = 5.4e-131
Identity = 255/281 (90.75%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSHSDTIPL+QSSQSDIDEIENLI++SVQ+GPSTVLPARPPSPPRASIPVSSSPF+ SNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPVS-----DPSSTGFGSPPNTLTEPVWDTVKRDLS 120
           PPLP KS  QK   PP+VFP+PPPLPVS     D S++GFGSPPNTLTEPVWDTVKRDLS
Sbjct: 61  PPLPPKSTIQK---PPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180
           RIVSNLKLVVFPNPFREDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFAL
Sbjct: 121 RIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 180

Query: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240
           LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNV+VKIVVVCVTLA
Sbjct: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLA 240

Query: 241 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           WSSWAAYPFMSSAVNPRRKALALYPV LMYVSVGFLIIAID
Sbjct: 241 WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Sed0003509 vs. NCBI nr
Match: XP_008467227.1 (PREDICTED: protein YIPF6 homolog [Cucumis melo] >TYK00296.1 protein YIPF6-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 478.0 bits (1229), Expect = 5.4e-131
Identity = 256/281 (91.10%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSHSDTIPL+QSSQSDIDEIENLI++SVQ+GPSTVLPARPPSPPRASIPVSSSPF+ SNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPVS-----DPSSTGFGSPPNTLTEPVWDTVKRDLS 120
           PPLP KS  QK   PP+VFP+PPPLPVS     D S++GFGSPPNTLTEPVWDTVKRDLS
Sbjct: 61  PPLPPKSTNQK---PPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180
           RIVSNLKLVVFPNPFREDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFAL
Sbjct: 121 RIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 180

Query: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240
           LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA
Sbjct: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240

Query: 241 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           WSSWAAYPFMSSAVNPRRKALALYPV LMYVSVGFLIIAID
Sbjct: 241 WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Sed0003509 vs. NCBI nr
Match: XP_022159810.1 (protein YIPF6 homolog [Momordica charantia])

HSP 1 Score: 476.1 bits (1224), Expect = 2.1e-130
Identity = 256/281 (91.10%), Postives = 264/281 (93.95%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSHSDTIPL+QSSQSDIDEIENLI++SVQSGPSTVLPARPPSPPRASIPVSSSPFI SNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQSGPSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPVS-----DPSSTGFGSPPNTLTEPVWDTVKRDLS 120
           PPLP KS  QK   PP+V P+PPPLPVS     D SSTGFGS PNTLTEPVWDTVKRDLS
Sbjct: 61  PPLPPKSTIQK---PPTVSPAPPPLPVSGNGRPDISSTGFGSAPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180
           RIVSNLKLVVFPNPFREDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFAL
Sbjct: 121 RIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 180

Query: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240
           LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GALICMLKDNVIVKI+VVCVTLA
Sbjct: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVIVKIIVVCVTLA 240

Query: 241 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           WSSWAAYPFMSSAVNPRRKALALYPV LMYVSVGFLIIAID
Sbjct: 241 WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Sed0003509 vs. NCBI nr
Match: XP_022995736.1 (protein YIPF6 homolog [Cucurbita maxima])

HSP 1 Score: 468.8 bits (1205), Expect = 3.3e-128
Identity = 252/281 (89.68%), Postives = 262/281 (93.24%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSHSDTIPL+QSSQSDIDEIENLI++SVQ+  STVLPARPPSPPRASIPVSSSPFI SNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPV-----SDPSSTGFGSPPNTLTEPVWDTVKRDLS 120
           PPLP KS  QK   PP+VFP+PPPLPV     SD S TGFGS PNTLTEPVWDTVKRDLS
Sbjct: 61  PPLPPKSTNQK---PPTVFPAPPPLPVSSNGRSDTSPTGFGSGPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180
           RIV+NLKLVVFPNPFREDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFAL
Sbjct: 121 RIVNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 180

Query: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240
           LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNV+VKIVVVCVTLA
Sbjct: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLA 240

Query: 241 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           WSSWAAYPFMS+AVNPRRKALALYPV LMYVSVGFLIIAID
Sbjct: 241 WSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Sed0003509 vs. ExPASy Swiss-Prot
Match: Q93VH1 (Protein YIP4b OS=Arabidopsis thaliana OX=3702 GN=YIP4B PE=1 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.0e-119
Identity = 232/282 (82.27%), Postives = 251/282 (89.01%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSH+DTIPL QSSQSDIDEIEN+++ S QSGP TVLPARPPSP R SIPVSSSPF+ SNL
Sbjct: 1   MSHNDTIPLYQSSQSDIDEIENMMNDSFQSGPGTVLPARPPSPIRPSIPVSSSPFVQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPVS------DPSSTGFGSPPNTLTEPVWDTVKRDL 120
           PPLP  S++    + P   P+PPPLP +          +GFGSPPNTLTEPVWDTVKRDL
Sbjct: 61  PPLPPSSSSSTQKVMP--VPAPPPLPSAGNEGNKSIGGSGFGSPPNTLTEPVWDTVKRDL 120

Query: 121 SRIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFA 180
           SRIVSNLKLVVFPNP+REDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFA
Sbjct: 121 SRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFA 180

Query: 181 LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTL 240
           LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GA+ICMLKDNVI+K+VVV VTL
Sbjct: 181 LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSVTL 240

Query: 241 AWSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           AWSSWAAYPFMS+AVNPRRKALALYPV LMYVSVGFLIIAI+
Sbjct: 241 AWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAIN 280

[Close]

BLAST of Sed0003509 vs. ExPASy Swiss-Prot
Match: O64614 (Protein YIP4a OS=Arabidopsis thaliana OX=3702 GN=YIP4A PE=1 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.7e-117
Identity = 234/285 (82.11%), Postives = 248/285 (87.02%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPV----SSSPFI 60
           MS  DT+PL+ SSQSDIDEIENLI+ SVQSGP TVL ARPPSP R SIPV    SSSPF+
Sbjct: 1   MSQGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFM 60

Query: 61  HSNLPPLPSKSAAQKPPLPPSVFPSPPPLPVSDPSS-----TGFGSPPNTLTEPVWDTVK 120
            SNLPPL   S+AQK     +  P PPPLP    SS     + FGSPPNTLTEPVWDTVK
Sbjct: 61  QSNLPPLHPSSSAQK----VTHVPVPPPLPAVSNSSNFQGASAFGSPPNTLTEPVWDTVK 120

Query: 121 RDLSRIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAV 180
           RDLSRIVSNLKLVVFPNP+REDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAV
Sbjct: 121 RDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAV 180

Query: 181 AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVC 240
           AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GA+ICMLKDNVI+K+VVV 
Sbjct: 181 AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVS 240

Query: 241 VTLAWSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           VTLAWSSWAAYPFMSSAVNPRRKALALYPV LMYVSVGFLIIAI+
Sbjct: 241 VTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAIN 281

[Close]

BLAST of Sed0003509 vs. ExPASy Swiss-Prot
Match: Q54RZ2 (Protein YIPF6 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf6 PE=3 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-29
Identity = 77/177 (43.50%), Postives = 110/177 (62.15%), Query Frame = 0


Query: 99  PNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLS 158
           PNTL EPV  T+ RDL  I   L  V+ P   R +    LRDWDLWGP    + + + LS
Sbjct: 7   PNTLDEPVIQTILRDLKMIGFKLYHVILP---RGNAANVLRDWDLWGPLILCLVMAIFLS 66

Query: 159 WSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICM 218
            SA  +K+  F + F ++  GA I+T+N  LL G+I FFQS+ +LGYC+FPL I  +I  
Sbjct: 67  ISAEEQKALEFTIVFVVVWCGAAIVTVNGQLLCGNISFFQSVCILGYCIFPLTIATIIIW 126

Query: 219 LKDN--VIVKIVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLII 274
           +  N  +IVK+ +V     WSS+A+Y F+ S+V   R+ LA+YPVLL Y+ + +L++
Sbjct: 127 IIQNFTMIVKLPIVGGAWFWSSFASYGFLGSSVPESRRLLAVYPVLLFYLVIAWLVV 180

[Close]

BLAST of Sed0003509 vs. ExPASy Swiss-Prot
Match: Q28CH8 (Protein YIPF6 OS=Xenopus tropicalis OX=8364 GN=yipf6 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27
Identity = 76/196 (38.78%), Postives = 113/196 (57.65%), Query Frame = 0


Query: 91  SSTGFGSPPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFI 150
           +ST      +TL EPV DT+ RDL  + +    V++P    +     LRDWDLWGP    
Sbjct: 39  ASTSQEDDLSTLDEPVKDTIMRDLKAVGNKFLHVMYP----KKSTTLLRDWDLWGPLVLC 98

Query: 151 VFLGLVLSWSASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCL 210
           V L L+L    +  K +    FA  F ++  GAV++TLN  LLGG I FFQSL +LGYC+
Sbjct: 99  VSLALMLQGGNADSKDDGGPQFAEVFVIIWFGAVVITLNSKLLGGTISFFQSLCVLGYCI 158

Query: 211 FPLDIGALICML-------KDNVIVKIVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYP 270
            PL +  L+C L         + IV++VVV V  AWS++A+  F++ +  P R+ALA+YP
Sbjct: 159 LPLTVAMLVCRLVLLLSHTTASFIVRLVVVTVMFAWSTFASTAFLADSQPPNRRALAVYP 218

Query: 271 VLLMYVSVGFLIIAID 277
           + L Y  + ++++  +
Sbjct: 219 IFLFYFVISWMVLTFN 230

[Close]

BLAST of Sed0003509 vs. ExPASy Swiss-Prot
Match: Q4QQU5 (Protein YIPF6 OS=Rattus norvegicus OX=10116 GN=Yipf6 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-25
Identity = 77/185 (41.62%), Postives = 103/185 (55.68%), Query Frame = 0


Query: 100 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSW 159
           +TL E +  T+ RDL  +      V++P          LRDWDLWGP    V L L+L  
Sbjct: 52  STLNESIRRTIMRDLKAVGRKFMHVLYP----RKSNTLLRDWDLWGPLILCVSLALMLQK 111

Query: 160 SASVKK----SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGAL 219
           S+   K    S  FA  F ++  GAV +TLN  LLGG+I FFQSL +LGYC+ PL+I  L
Sbjct: 112 SSVEGKRDGGSPEFAEVFVIIWFGAVTITLNSKLLGGNISFFQSLCVLGYCVLPLNIAML 171

Query: 220 ICML-------KDNVIVKIVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVLLMYVSV 274
           IC L         N ++++ VV V  AWS  A+  F++    P RKALA+YPV L Y  V
Sbjct: 172 ICRLLLLAGQGPINFMIRLFVVLVMFAWSVIASTAFLADCQPPNRKALAVYPVFLFYFVV 231

[Close]

BLAST of Sed0003509 vs. ExPASy TrEMBL
Match: A0A5D3BPX9 (Protein YIP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00400 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.6e-131
Identity = 256/281 (91.10%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSHSDTIPL+QSSQSDIDEIENLI++SVQ+GPSTVLPARPPSPPRASIPVSSSPF+ SNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPVS-----DPSSTGFGSPPNTLTEPVWDTVKRDLS 120
           PPLP KS  QK   PP+VFP+PPPLPVS     D S++GFGSPPNTLTEPVWDTVKRDLS
Sbjct: 61  PPLPPKSTNQK---PPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180
           RIVSNLKLVVFPNPFREDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFAL
Sbjct: 121 RIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 180

Query: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240
           LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA
Sbjct: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240

Query: 241 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           WSSWAAYPFMSSAVNPRRKALALYPV LMYVSVGFLIIAID
Sbjct: 241 WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Sed0003509 vs. ExPASy TrEMBL
Match: A0A0A0KL60 (Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_5G173430 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.6e-131
Identity = 255/281 (90.75%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSHSDTIPL+QSSQSDIDEIENLI++SVQ+GPSTVLPARPPSPPRASIPVSSSPF+ SNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPVS-----DPSSTGFGSPPNTLTEPVWDTVKRDLS 120
           PPLP KS  QK   PP+VFP+PPPLPVS     D S++GFGSPPNTLTEPVWDTVKRDLS
Sbjct: 61  PPLPPKSTIQK---PPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180
           RIVSNLKLVVFPNPFREDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFAL
Sbjct: 121 RIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 180

Query: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240
           LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNV+VKIVVVCVTLA
Sbjct: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLA 240

Query: 241 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           WSSWAAYPFMSSAVNPRRKALALYPV LMYVSVGFLIIAID
Sbjct: 241 WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Sed0003509 vs. ExPASy TrEMBL
Match: A0A1S3CT87 (Protein YIP OS=Cucumis melo OX=3656 GN=LOC103504629 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.6e-131
Identity = 256/281 (91.10%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSHSDTIPL+QSSQSDIDEIENLI++SVQ+GPSTVLPARPPSPPRASIPVSSSPF+ SNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPVS-----DPSSTGFGSPPNTLTEPVWDTVKRDLS 120
           PPLP KS  QK   PP+VFP+PPPLPVS     D S++GFGSPPNTLTEPVWDTVKRDLS
Sbjct: 61  PPLPPKSTNQK---PPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180
           RIVSNLKLVVFPNPFREDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFAL
Sbjct: 121 RIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 180

Query: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240
           LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA
Sbjct: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240

Query: 241 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           WSSWAAYPFMSSAVNPRRKALALYPV LMYVSVGFLIIAID
Sbjct: 241 WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Sed0003509 vs. ExPASy TrEMBL
Match: A0A6J1DZT8 (Protein YIP OS=Momordica charantia OX=3673 GN=LOC111026118 PE=3 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.0e-130
Identity = 256/281 (91.10%), Postives = 264/281 (93.95%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSHSDTIPL+QSSQSDIDEIENLI++SVQSGPSTVLPARPPSPPRASIPVSSSPFI SNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQSGPSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPVS-----DPSSTGFGSPPNTLTEPVWDTVKRDLS 120
           PPLP KS  QK   PP+V P+PPPLPVS     D SSTGFGS PNTLTEPVWDTVKRDLS
Sbjct: 61  PPLPPKSTIQK---PPTVSPAPPPLPVSGNGRPDISSTGFGSAPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180
           RIVSNLKLVVFPNPFREDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFAL
Sbjct: 121 RIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 180

Query: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240
           LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GALICMLKDNVIVKI+VVCVTLA
Sbjct: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVIVKIIVVCVTLA 240

Query: 241 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           WSSWAAYPFMSSAVNPRRKALALYPV LMYVSVGFLIIAID
Sbjct: 241 WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Sed0003509 vs. ExPASy TrEMBL
Match: A0A6J1K2R2 (Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111491180 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.6e-128
Identity = 252/281 (89.68%), Postives = 262/281 (93.24%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSHSDTIPL+QSSQSDIDEIENLI++SVQ+  STVLPARPPSPPRASIPVSSSPFI SNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPV-----SDPSSTGFGSPPNTLTEPVWDTVKRDLS 120
           PPLP KS  QK   PP+VFP+PPPLPV     SD S TGFGS PNTLTEPVWDTVKRDLS
Sbjct: 61  PPLPPKSTNQK---PPTVFPAPPPLPVSSNGRSDTSPTGFGSGPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180
           RIV+NLKLVVFPNPFREDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFAL
Sbjct: 121 RIVNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 180

Query: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLA 240
           LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNV+VKIVVVCVTLA
Sbjct: 181 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLA 240

Query: 241 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           WSSWAAYPFMS+AVNPRRKALALYPV LMYVSVGFLIIAID
Sbjct: 241 WSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Sed0003509 vs. TAIR 10
Match: AT4G30260.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 431.0 bits (1107), Expect = 7.1e-121
Identity = 232/282 (82.27%), Postives = 251/282 (89.01%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPVSSSPFIHSNL 60
           MSH+DTIPL QSSQSDIDEIEN+++ S QSGP TVLPARPPSP R SIPVSSSPF+ SNL
Sbjct: 1   MSHNDTIPLYQSSQSDIDEIENMMNDSFQSGPGTVLPARPPSPIRPSIPVSSSPFVQSNL 60

Query: 61  PPLPSKSAAQKPPLPPSVFPSPPPLPVS------DPSSTGFGSPPNTLTEPVWDTVKRDL 120
           PPLP  S++    + P   P+PPPLP +          +GFGSPPNTLTEPVWDTVKRDL
Sbjct: 61  PPLPPSSSSSTQKVMP--VPAPPPLPSAGNEGNKSIGGSGFGSPPNTLTEPVWDTVKRDL 120

Query: 121 SRIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFA 180
           SRIVSNLKLVVFPNP+REDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFA
Sbjct: 121 SRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFA 180

Query: 181 LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTL 240
           LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GA+ICMLKDNVI+K+VVV VTL
Sbjct: 181 LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSVTL 240

Query: 241 AWSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           AWSSWAAYPFMS+AVNPRRKALALYPV LMYVSVGFLIIAI+
Sbjct: 241 AWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAIN 280

[Close]

BLAST of Sed0003509 vs. TAIR 10
Match: AT2G18840.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 422.9 bits (1086), Expect = 1.9e-118
Identity = 234/285 (82.11%), Postives = 248/285 (87.02%), Query Frame = 0


Query: 1   MSHSDTIPLNQSSQSDIDEIENLIHSSVQSGPSTVLPARPPSPPRASIPV----SSSPFI 60
           MS  DT+PL+ SSQSDIDEIENLI+ SVQSGP TVL ARPPSP R SIPV    SSSPF+
Sbjct: 1   MSQGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFM 60

Query: 61  HSNLPPLPSKSAAQKPPLPPSVFPSPPPLPVSDPSS-----TGFGSPPNTLTEPVWDTVK 120
            SNLPPL   S+AQK     +  P PPPLP    SS     + FGSPPNTLTEPVWDTVK
Sbjct: 61  QSNLPPLHPSSSAQK----VTHVPVPPPLPAVSNSSNFQGASAFGSPPNTLTEPVWDTVK 120

Query: 121 RDLSRIVSNLKLVVFPNPFREDPGKSLRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAV 180
           RDLSRIVSNLKLVVFPNP+REDPGK+LRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAV
Sbjct: 121 RDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAV 180

Query: 181 AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVC 240
           AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GA+ICMLKDNVI+K+VVV 
Sbjct: 181 AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVS 240

Query: 241 VTLAWSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 277
           VTLAWSSWAAYPFMSSAVNPRRKALALYPV LMYVSVGFLIIAI+
Sbjct: 241 VTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAIN 281

The following BLAST results are available for this feature:

BLAST of Sed0003509 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876122.1	2.4e-131	91.10	protein YIPF6 homolog [Benincasa hispida]	[more]
XP_004143629.1	5.4e-131	90.75	protein YIPF6 homolog [Cucumis sativus] >KGN50415.1 hypothetical protein Csa_000...	[more]
XP_008467227.1	5.4e-131	91.10	PREDICTED: protein YIPF6 homolog [Cucumis melo] >TYK00296.1 protein YIPF6-like p...	[more]
XP_022159810.1	2.1e-130	91.10	protein YIPF6 homolog [Momordica charantia]	[more]
XP_022995736.1	3.3e-128	89.68	protein YIPF6 homolog [Cucurbita maxima]	[more]

BLAST of Sed0003509 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VH1	1.0e-119	82.27	Protein YIP4b OS=Arabidopsis thaliana OX=3702 GN=YIP4B PE=1 SV=1	[more]
O64614	2.7e-117	82.11	Protein YIP4a OS=Arabidopsis thaliana OX=3702 GN=YIP4A PE=1 SV=1	[more]
Q54RZ2	1.3e-29	43.50	Protein YIPF6 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf6 PE=3 SV=2	[more]
Q28CH8	1.5e-27	38.78	Protein YIPF6 OS=Xenopus tropicalis OX=8364 GN=yipf6 PE=2 SV=1	[more]
Q4QQU5	1.9e-25	41.62	Protein YIPF6 OS=Rattus norvegicus OX=10116 GN=Yipf6 PE=1 SV=1	[more]

BLAST of Sed0003509 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPX9	2.6e-131	91.10	Protein YIP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00400 P...	[more]
A0A0A0KL60	2.6e-131	90.75	Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_5G173430 PE=3 SV=1	[more]
A0A1S3CT87	2.6e-131	91.10	Protein YIP OS=Cucumis melo OX=3656 GN=LOC103504629 PE=3 SV=1	[more]
A0A6J1DZT8	1.0e-130	91.10	Protein YIP OS=Momordica charantia OX=3673 GN=LOC111026118 PE=3 SV=1	[more]
A0A6J1K2R2	1.6e-128	89.68	Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111491180 PE=3 SV=1	[more]

BLAST of Sed0003509 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30260.1	7.1e-121	82.27	Integral membrane Yip1 family protein	[more]
AT2G18840.1	1.9e-118	82.11	Integral membrane Yip1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006977	Yip1 domain	PFAM	PF04893	Yip1	coord: 139..270 e-value: 1.7E-12 score: 47.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..102
None	No IPR available	PANTHER	PTHR21236	GOLGI MEMBRANE PROTEIN YIP1	coord: 4..275
None	No IPR available	PANTHER	PTHR21236:SF23	PROTEIN YIPF	coord: 4..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003509.1	Sed0003509.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0016020	membrane