Sed0003466 (gene) Chayote v1

Overview


Name	Sed0003466
Type	gene
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Location	LG01: 24891485 .. 24892922 (-)
RNA-Seq Expression	Sed0003466
Synteny	Sed0003466

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACTGTTAGGGCTTTTGCAATTTTAGTTTTTGTTTTGGCATTTTCCTACGAAGTCCAACAATGTCACTGCCAGCATATTGGTATGTTTATTTTTTAAATCTATATTCGACCATTATCAAGAGACAACTATCTTGTAACGATTGAATATAAATTTTCTCACCCTTGATCCGTTTTTTTAAACTCATATAGGGCTTATTTTTTATGGTAACACATTTTGGGTGGCTTGCACCTATGACCTTAAGATGGAAAAATATATCAATACCACTCGGCTTATCTCACTTTGACATTAACACTATTGGTTAGTTATAAAGAATAATAGAATTTTATTTCATAAATATTTTGTCATTTCTCGTTTCTCCTTTCTTTTTCATTGTAAAAAAAATAATGTGATTCAAAATTTTATGTTATTTCAATTTTACAGAAAACATTAGGGGATTTTGTTTTTTATGTATAACGGAAAAATGAAAGAAATTGTATGAATTCAAAAAATTTTGAAAACAAAACCATTTATAGAAGAAAAATGGGTAGATCCTTTTAAAGTGAACAAAATGCCCACTAATCAAGTGAACCGATACTTATTACCTACAATCAGTTTAACAAATTGGAATAAAGTAGATTCAACTAATGGAAAGGATGCAATTTTAGAATATGATCAAAAAGTACAAAAATCTACTATATACAAAATATTTTTTAAAAAAAGTGTTCAAATTAAAAGGTTGAGATAAAGTTGCATATCTATATCAATTTCCCTATTTATTATGCTTGATTTTATTTATATAATGTTTGAAAAAAAAAACACAAATCATCATGAGGCATACAATAAGGAACTTGGTTGTGTTGATGTTAAAAATATGTTGAGTAGCAATAATATTTACCAAGAGCTTCTTTTTTCTTTTTACAAAATATATAGAAACAAGAGAAGGATATATATATATAAATATGTGACTGTGTTTGCAGTTGCAGAATCCAAGTATCAAATTCCATTATCAAAGTGGCGAGTGATGATTGGGAACGGTTTAAAGGATATACCAATAGAGGCACATTGCAGGTCCAAAGACGATGATTTAGGTAGAGAACTTTTCAAATATTTTATATCGAATATGTAACATGTTTATTATTAGGTTATACATAATGAAGACGGCTAATTTTGGTGATTGATTATTACAGGCGTGCATGTGATAAATCCGGGGGGTGAATACAGTTGGGGATTCAAGATGAATATTTGGCAAATCACAAAGTTTGAGTGCACCATTAAGAGCAAATTGGGAGAGAATACATTTGAGGTTTTCTGGCCAGAAAGAGGGAAATGGCTTACCAATAAATGCAGTGATCATACTTGTTTTTGGAATGCTAATGAGAAAGGTTTCTCTTTGGTTACTGCTGATAAAACTGAATATTTCATCCATCCATGGAAACCTCCCCCACCTCCCTAG

mRNA sequence

ATGAAAACTGTTAGGGCTTTTGCAATTTTAGTTTTTGTTTTGGCATTTTCCTACGAAGTCCAACAATGTCACTGCCAGCATATTGTTGCAGAATCCAAGTATCAAATTCCATTATCAAAGTGGCGAGTGATGATTGGGAACGGTTTAAAGGATATACCAATAGAGGCACATTGCAGGTCCAAAGACGATGATTTAGGCGTGCATGTGATAAATCCGGGGGGTGAATACAGTTGGGGATTCAAGATGAATATTTGGCAAATCACAAAGTTTGAGTGCACCATTAAGAGCAAATTGGGAGAGAATACATTTGAGGTTTTCTGGCCAGAAAGAGGGAAATGGCTTACCAATAAATGCAGTGATCATACTTGTTTTTGGAATGCTAATGAGAAAGGTTTCTCTTTGGTTACTGCTGATAAAACTGAATATTTCATCCATCCATGGAAACCTCCCCCACCTCCCTAG

Coding sequence (CDS)

ATGAAAACTGTTAGGGCTTTTGCAATTTTAGTTTTTGTTTTGGCATTTTCCTACGAAGTCCAACAATGTCACTGCCAGCATATTGTTGCAGAATCCAAGTATCAAATTCCATTATCAAAGTGGCGAGTGATGATTGGGAACGGTTTAAAGGATATACCAATAGAGGCACATTGCAGGTCCAAAGACGATGATTTAGGCGTGCATGTGATAAATCCGGGGGGTGAATACAGTTGGGGATTCAAGATGAATATTTGGCAAATCACAAAGTTTGAGTGCACCATTAAGAGCAAATTGGGAGAGAATACATTTGAGGTTTTCTGGCCAGAAAGAGGGAAATGGCTTACCAATAAATGCAGTGATCATACTTGTTTTTGGAATGCTAATGAGAAAGGTTTCTCTTTGGTTACTGCTGATAAAACTGAATATTTCATCCATCCATGGAAACCTCCCCCACCTCCCTAG

Protein sequence

MKTVRAFAILVFVLAFSYEVQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRSKDDDLGVHVINPGGEYSWGFKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSLVTADKTEYFIHPWKPPPPP

Homology

[Close]

BLAST of Sed0003466 vs. NCBI nr
Match: XP_038907112.1 (S-protein homolog 74-like [Benincasa hispida])

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-38
Identity = 79/149 (53.02%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 1   MKTVRAFAILVFVLAFSYEVQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRS 60
           M+ +++FA+LV VLAF+  V+QC+C      SKYQ+PL+ W+V I N  K+  +E HC+S
Sbjct: 1   MEALKSFALLVLVLAFACHVEQCYCGW---HSKYQLPLTNWQVTIINYQKNAALEVHCKS 60

Query: 61  KDDDLGVHVI-NPGGEYSWGFKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCS 120
           KDDDLGVHVI N G  Y+WGFK N  Q T+F C  +S+LG  +FEVFWPE G WL+++C 
Sbjct: 61  KDDDLGVHVIKNEGEHYNWGFKENFLQTTRFWCNFQSRLGHASFEVFWPESGTWLSDRCD 120

Query: 121 DHTCFWNANEKGFSLVT-ADKTEYFIHPW 148
           D  C W A+ KGFSL+    KT  F HPW
Sbjct: 121 DSNCVWVADNKGFSLLNIPTKTLEFQHPW 146

[Close]

BLAST of Sed0003466 vs. NCBI nr
Match: XP_008458671.1 (PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo])

HSP 1 Score: 168.3 bits (425), Expect = 5.1e-38
Identity = 78/149 (52.35%), Postives = 104/149 (69.80%), Query Frame = 0


Query: 1   MKTVRAFAILVFVLAFSYEVQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRS 60
           M+ +++FA+L+ VLAF+++V QC+C     +SKYQ+PL+ W+V I N   +  +E HC+S
Sbjct: 1   MEALKSFALLILVLAFAWKVDQCYCG---GDSKYQLPLTDWQVTIINYQINASLEVHCKS 60

Query: 61  KDDDLGVHVI-NPGGEYSWGFKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCS 120
           KDDDLGVHVI N G  YSWGFK N  Q TKF C  +S+LG  +FEVFWPE G WL+++CS
Sbjct: 61  KDDDLGVHVIQNEGERYSWGFKENWLQTTKFWCNFQSRLGHASFEVFWPETGTWLSDRCS 120

Query: 121 DHTCFWNANEKGFSLVTAD-KTEYFIHPW 148
           +  C W A+  GFSL+    KT  F HPW
Sbjct: 121 NSNCVWVASNDGFSLLNGPAKTLEFQHPW 146

[Close]

BLAST of Sed0003466 vs. NCBI nr
Match: XP_011656368.1 (S-protein homolog 1 [Cucumis sativus] >KGN45709.1 hypothetical protein Csa_005711 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-34
Identity = 77/150 (51.33%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 1   MKTVRAFAILVFVLAFSYEVQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRS 60
           M+ +++FA+L+ VLAF+ +V Q +C     +SKYQ+PL+ W V I N   +  ++ HC+S
Sbjct: 1   MEALKSFALLILVLAFASKVDQSYCGR---DSKYQLPLTDWTVTIINYQINASLQVHCKS 60

Query: 61  KDDDLGVHVI-NPGGEYSWGFKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKC- 120
           KDDDLGVHVI N G  YSWGFK N  Q TK+ C  +SKLG  +FEVFWPERG W +++C 
Sbjct: 61  KDDDLGVHVIQNEGEHYSWGFKENWLQTTKYWCDFQSKLGHASFEVFWPERGTWFSDRCG 120

Query: 121 SDHTCFWNANEKGFSLVTAD-KTEYFIHPW 148
           S+  C W A   GFSL+ A  KT  F HPW
Sbjct: 121 SNSNCVWVAAHDGFSLLNAPAKTLEFQHPW 147

[Close]

BLAST of Sed0003466 vs. NCBI nr
Match: XP_023522257.1 (S-protein homolog 1-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.4 bits (337), Expect = 8.2e-28
Identity = 58/115 (50.43%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 20  VQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRSKDDDLGVHVINPGGEYSWG 79
           +  C  Q   ++SKYQ PLS W V I N +KD  + AHC+SK+DDLG HVI PGG+Y W 
Sbjct: 3   INSCFAQ---SDSKYQRPLSPWEVAILNHMKDSTLLAHCKSKNDDLGEHVIVPGGKYYWM 62

Query: 80  FKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSL 135
           F  N+WQ T F C   SK G+ + EVFWP+ G WL ++C+ +TC W A + G SL
Sbjct: 63  FSENVWQSTLFWCNFSSKHGQASGEVFWPDNGGWLQDRCASNTCIWAARDDGISL 114

[Close]

BLAST of Sed0003466 vs. NCBI nr
Match: XP_023001658.1 (S-protein homolog 74-like [Cucurbita maxima])

HSP 1 Score: 125.9 bits (315), Expect = 2.9e-25
Identity = 60/141 (42.55%), Postives = 82/141 (58.16%), Query Frame = 0


Query: 9   ILVFVLAFSYEVQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRSKDDDLGVH 68
           IL+  L  +  ++ C  Q    ESK Q+P S+W+V I N + D  +  HC+SKD+DLG H
Sbjct: 10  ILLLGLGSNMLMKPCFAQ--PTESKVQLPFSRWQVTIYNHMIDSTLMVHCKSKDNDLGRH 69

Query: 69  VINPGGEYSWGFKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCSDHTCFWNAN 128
            I  G  Y   FK NIWQ T+F C   SK G+ T +VFWPE G  L+++C+DH C W+A 
Sbjct: 70  EIKQGDNYFLKFKENIWQTTQFWCHFSSKYGQVTGDVFWPEEGSRLSDECNDHNCVWSAQ 129

Query: 129 EKGFSLVTADKTEY-FIHPWK 149
           + G  L+      Y   +PWK
Sbjct: 130 DGGIFLLRGSINSYQLAYPWK 148

[Close]

BLAST of Sed0003466 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.1e-10
Identity = 35/114 (30.70%), Postives = 52/114 (45.61%), Query Frame = 0


Query: 37  PLSKWRVMIGNGL-KDIPIEAHCRSKDDDLGVHVINPGGEYSWGFKMNIWQITKFECTIK 96
           P SK  V I N L   + +  HC+SKDDDLG   + PG  +S+ F    +  T + C+  
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 97  SKLGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSLVTADKTEYF--IHPW 148
                ++F+++   R     NKC    C W     G      D+T+ F   +PW
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFN-DETKQFDLCYPW 156

[Close]

BLAST of Sed0003466 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.8e-09
Identity = 32/98 (32.65%), Postives = 46/98 (46.94%), Query Frame = 0


Query: 38  LSKWRVMIGNGL-KDIPIEAHCRSKDDDLGVHVINPGGEYSWGFKMNIWQITKFECTIKS 97
           +S+W+V + NGL     +  HC+SK+DDLG   +     +SW F  N+   T F C +  
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 98  KLGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSL 135
             G     VFW +    L ++C    C W A   G  L
Sbjct: 98  DNGHMNVNVFWDD--VILFHRCGWKNCIWTAKTDGLYL 133

[Close]

BLAST of Sed0003466 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 35/111 (31.53%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 41  WR---VMIGNGLKDIPIEAHCRSKDDDLGVHVINPGGEYSWGFKMNIWQITKFECTIKSK 100
           WR   V + N +   P+  HC+SK DDLG+HV+    EY + F+ N+W+ T F C+ +  
Sbjct: 26  WRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWD 85

Query: 101 LGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSLVTADKTEYFIHPWK 149
               +F+++  +R + +   C D  C W     G       K + F  PWK
Sbjct: 86  SQFKSFDIYDAQRDQGI---CDD--CQWEIKPDG-PCRLGKKAKCF--PWK 128

[Close]

BLAST of Sed0003466 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08
Identity = 37/129 (28.68%), Postives = 59/129 (45.74%), Query Frame = 0


Query: 12  FVLAFSYEVQQCHCQHIVAES----KYQIP-LSKWRVMIGNGL-KDIPIEAHCRSKDDDL 71
           F+LA  + +      H++A         +P +S+W+V + NGL     +  HC+SK++DL
Sbjct: 7   FILAICFYLVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDL 66

Query: 72  GVHVINPGGEYSWGFKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCSDHTCFW 131
           G   +     +SW F  N+   T F C +    G    +VFW +    L ++C    C W
Sbjct: 67  GDINLKFLDRFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDD--VILFHRCDWKNCVW 126

Query: 132 NANEKGFSL 135
            A   G  L
Sbjct: 127 TAKNDGLYL 133

[Close]

BLAST of Sed0003466 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.5e-08
Identity = 34/121 (28.10%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 29  VAESKYQIPLSKWRVMIGNGLKDIPIEAHCRSKDDDLGVHVINPGGEYSWGFKMNIWQIT 88
           + E+K  I     RV I N   D  +  HC+S+DDDLG H++  G  + W F +N    T
Sbjct: 34  IQEAKEPIRGHLTRVTIQND-NDYLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYST 93

Query: 89  KFECTI-KSKLGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSLVTADKTE-YFIHP 148
            + C   + ++ +  FE++   R  +   +C++  C W A + G    + D  + Y  + 
Sbjct: 94  LYFCGFSQGQMKKGVFEIYRANRDFY---RCAN--CTWKAEKDGIYGYSEDPVKGYLFYN 148

[Close]

BLAST of Sed0003466 vs. ExPASy TrEMBL
Match: A0A1S3C8Z6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.5e-38
Identity = 78/149 (52.35%), Postives = 104/149 (69.80%), Query Frame = 0


Query: 1   MKTVRAFAILVFVLAFSYEVQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRS 60
           M+ +++FA+L+ VLAF+++V QC+C     +SKYQ+PL+ W+V I N   +  +E HC+S
Sbjct: 1   MEALKSFALLILVLAFAWKVDQCYCG---GDSKYQLPLTDWQVTIINYQINASLEVHCKS 60

Query: 61  KDDDLGVHVI-NPGGEYSWGFKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCS 120
           KDDDLGVHVI N G  YSWGFK N  Q TKF C  +S+LG  +FEVFWPE G WL+++CS
Sbjct: 61  KDDDLGVHVIQNEGERYSWGFKENWLQTTKFWCNFQSRLGHASFEVFWPETGTWLSDRCS 120

Query: 121 DHTCFWNANEKGFSLVTAD-KTEYFIHPW 148
           +  C W A+  GFSL+    KT  F HPW
Sbjct: 121 NSNCVWVASNDGFSLLNGPAKTLEFQHPW 146

[Close]

BLAST of Sed0003466 vs. ExPASy TrEMBL
Match: A0A0A0KA40 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_6G007430 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 5.7e-35
Identity = 77/150 (51.33%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 1   MKTVRAFAILVFVLAFSYEVQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRS 60
           M+ +++FA+L+ VLAF+ +V Q +C     +SKYQ+PL+ W V I N   +  ++ HC+S
Sbjct: 1   MEALKSFALLILVLAFASKVDQSYCGR---DSKYQLPLTDWTVTIINYQINASLQVHCKS 60

Query: 61  KDDDLGVHVI-NPGGEYSWGFKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKC- 120
           KDDDLGVHVI N G  YSWGFK N  Q TK+ C  +SKLG  +FEVFWPERG W +++C 
Sbjct: 61  KDDDLGVHVIQNEGEHYSWGFKENWLQTTKYWCDFQSKLGHASFEVFWPERGTWFSDRCG 120

Query: 121 SDHTCFWNANEKGFSLVTAD-KTEYFIHPW 148
           S+  C W A   GFSL+ A  KT  F HPW
Sbjct: 121 SNSNCVWVAAHDGFSLLNAPAKTLEFQHPW 147

[Close]

BLAST of Sed0003466 vs. ExPASy TrEMBL
Match: A0A6J1KR58 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495733 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25
Identity = 60/141 (42.55%), Postives = 82/141 (58.16%), Query Frame = 0


Query: 9   ILVFVLAFSYEVQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRSKDDDLGVH 68
           IL+  L  +  ++ C  Q    ESK Q+P S+W+V I N + D  +  HC+SKD+DLG H
Sbjct: 10  ILLLGLGSNMLMKPCFAQ--PTESKVQLPFSRWQVTIYNHMIDSTLMVHCKSKDNDLGRH 69

Query: 69  VINPGGEYSWGFKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCSDHTCFWNAN 128
            I  G  Y   FK NIWQ T+F C   SK G+ T +VFWPE G  L+++C+DH C W+A 
Sbjct: 70  EIKQGDNYFLKFKENIWQTTQFWCHFSSKYGQVTGDVFWPEEGSRLSDECNDHNCVWSAQ 129

Query: 129 EKGFSLVTADKTEY-FIHPWK 149
           + G  L+      Y   +PWK
Sbjct: 130 DGGIFLLRGSINSYQLAYPWK 148

[Close]

BLAST of Sed0003466 vs. ExPASy TrEMBL
Match: A0A6J1GSZ3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456688 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 7.7e-24
Identity = 54/130 (41.54%), Postives = 75/130 (57.69%), Query Frame = 0


Query: 20  VQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRSKDDDLGVHVINPGGEYSWG 79
           +  C  Q   ++S      S W V I N LKD  + AHC+SKDDDLG HVI PG +Y W 
Sbjct: 3   INSCFAQ---SDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWK 62

Query: 80  FKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSLVTADK 139
           F  N+ Q T + C   SK G+ + +VFWPE+  WL+++C+ +TC W A + G S+     
Sbjct: 63  FHENVLQTTLYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVF 122

Query: 140 TEY-FIHPWK 149
             Y  ++PWK
Sbjct: 123 GLYELVYPWK 129

[Close]

BLAST of Sed0003466 vs. ExPASy TrEMBL
Match: A0A6J1GQZ0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456686 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.9e-23
Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 20  VQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIPIEAHCRSKDDDLGVHVINPGGEYSWG 79
           +  C  Q   ++S      S W V I N LKD  + AHC+SKDDDLG HVI PG +Y W 
Sbjct: 3   INSCFAQ---SDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWK 62

Query: 80  FKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSLVTADK 139
           F  N+ Q T + C   SK G+   +VFWPE+  WL+++C+ +TC W A + G S+     
Sbjct: 63  FHENVLQTTLYWCNFSSKGGQAFGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVF 122

Query: 140 TEY-FIHPWK 149
             Y  ++PWK
Sbjct: 123 GLYELVYPWK 129

[Close]

BLAST of Sed0003466 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11
Identity = 35/114 (30.70%), Postives = 52/114 (45.61%), Query Frame = 0


Query: 37  PLSKWRVMIGNGL-KDIPIEAHCRSKDDDLGVHVINPGGEYSWGFKMNIWQITKFECTIK 96
           P SK  V I N L   + +  HC+SKDDDLG   + PG  +S+ F    +  T + C+  
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 97  SKLGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSLVTADKTEYF--IHPW 148
                ++F+++   R     NKC    C W     G      D+T+ F   +PW
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFN-DETKQFDLCYPW 156

[Close]

BLAST of Sed0003466 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 61.6 bits (148), Expect = 6.3e-10
Identity = 32/98 (32.65%), Postives = 46/98 (46.94%), Query Frame = 0


Query: 38  LSKWRVMIGNGL-KDIPIEAHCRSKDDDLGVHVINPGGEYSWGFKMNIWQITKFECTIKS 97
           +S+W+V + NGL     +  HC+SK+DDLG   +     +SW F  N+   T F C +  
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 98  KLGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSL 135
             G     VFW +    L ++C    C W A   G  L
Sbjct: 98  DNGHMNVNVFWDD--VILFHRCGWKNCIWTAKTDGLYL 133

[Close]

BLAST of Sed0003466 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 61.2 bits (147), Expect = 8.2e-10
Identity = 38/130 (29.23%), Postives = 57/130 (43.85%), Query Frame = 0


Query: 9   ILVFVLAFSYEVQQCHCQHIVAESKYQIPLSKWRVMIGNGLKDIP-IEAHCRSKDDDLGV 68
           + +F +     +   +  H + ESK         V++ N L+    ++ HCRSKDDDLG 
Sbjct: 4   LFIFSIVIGLCIGVSNAFHEIGESK---------VVLSNQLEHSKLLKVHCRSKDDDLGE 63

Query: 69  HVINPGGEYSWGFKMNIWQITKFEC------TIKSKLGENTFEVFWPERGKWLTNKCSDH 128
           H++  G +Y + F  NIWQ T F C        K  L    +E  W        +K  + 
Sbjct: 64  HILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETSW--------SKALEA 116

Query: 129 TCFWNANEKG 132
           +C W   E G
Sbjct: 124 SCKWIGREDG 116

[Close]

BLAST of Sed0003466 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 35/111 (31.53%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 41  WR---VMIGNGLKDIPIEAHCRSKDDDLGVHVINPGGEYSWGFKMNIWQITKFECTIKSK 100
           WR   V + N +   P+  HC+SK DDLG+HV+    EY + F+ N+W+ T F C+ +  
Sbjct: 26  WRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWD 85

Query: 101 LGENTFEVFWPERGKWLTNKCSDHTCFWNANEKGFSLVTADKTEYFIHPWK 149
               +F+++  +R + +   C D  C W     G       K + F  PWK
Sbjct: 86  SQFKSFDIYDAQRDQGI---CDD--CQWEIKPDG-PCRLGKKAKCF--PWK 128

[Close]

BLAST of Sed0003466 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09
Identity = 37/129 (28.68%), Postives = 59/129 (45.74%), Query Frame = 0


Query: 12  FVLAFSYEVQQCHCQHIVAES----KYQIP-LSKWRVMIGNGL-KDIPIEAHCRSKDDDL 71
           F+LA  + +      H++A         +P +S+W+V + NGL     +  HC+SK++DL
Sbjct: 7   FILAICFYLVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDL 66

Query: 72  GVHVINPGGEYSWGFKMNIWQITKFECTIKSKLGENTFEVFWPERGKWLTNKCSDHTCFW 131
           G   +     +SW F  N+   T F C +    G    +VFW +    L ++C    C W
Sbjct: 67  GDINLKFLDRFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDD--VILFHRCDWKNCVW 126

Query: 132 NANEKGFSL 135
            A   G  L
Sbjct: 127 TAKNDGLYL 133

The following BLAST results are available for this feature:

BLAST of Sed0003466 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907112.1	1.0e-38	53.02	S-protein homolog 74-like [Benincasa hispida]	[more]
XP_008458671.1	5.1e-38	52.35	PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]	[more]
XP_011656368.1	1.2e-34	51.33	S-protein homolog 1 [Cucumis sativus] >KGN45709.1 hypothetical protein Csa_00571...	[more]
XP_023522257.1	8.2e-28	50.43	S-protein homolog 1-like, partial [Cucurbita pepo subsp. pepo]	[more]
XP_023001658.1	2.9e-25	42.55	S-protein homolog 74-like [Cucurbita maxima]	[more]

BLAST of Sed0003466 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	6.1e-10	30.70	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
F4JLS0	8.8e-09	32.65	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
O23020	2.0e-08	31.53	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
Q2HQ46	3.3e-08	28.68	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
P0DN92	7.5e-08	28.10	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]

BLAST of Sed0003466 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8Z6	2.5e-38	52.35	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1	[more]
A0A0A0KA40	5.7e-35	51.33	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_6G007430 PE=3 SV=1	[more]
A0A6J1KR58	1.4e-25	42.55	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495733 PE=3 SV=1	[more]
A0A6J1GSZ3	7.7e-24	41.54	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456688 PE=3 SV=1	[more]
A0A6J1GQZ0	2.9e-23	41.54	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456686 PE=3 SV=1	[more]

BLAST of Sed0003466 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	4.3e-11	30.70	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	6.3e-10	32.65	S-protein homologue 1	[more]
AT5G04350.1	8.2e-10	29.23	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	1.4e-09	31.53	Plant self-incompatibility protein S1 family	[more]
AT4G29035.1	2.4e-09	28.68	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 43..147 e-value: 1.1E-21 score: 77.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 38..134
None	No IPR available	PANTHER	PTHR31232:SF59	SUBFAMILY NOT NAMED	coord: 38..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003466.1	Sed0003466.1	mRNA