Sed0003411 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAAGCTCCTTCCCTGCTATTTCTATGCACAACCCTAATCAGAGATGAAATTGCTCAAAGTAATCGTCTCCATTGTTTTTTCTGTTACTTCTACTCTGTTCTTCCGTATTCGTTTCTTTGCTTTGATTTCTTAATGCGTTGCTCTTTTTCAGGGGATGACATTCCAGACGGTGTTTATGATCTTCCTCCTCACCTTTTGGATGTTCTGGCTTCGCAGCTGCCGCCGTTGGGTTTGCAGAATTTGCAGTCAGGAATGTATGTCGTCCCGCCCTGA ATGGCGGAAGCTCCTTCCCTGCTATTTCTATGCACAACCCTAATCAGAGATGAAATTGCTCAAAGGGATGACATTCCAGACGGTGTTTATGATCTTCCTCCTCACCTTTTGGATGTTCTGGCTTCGCAGCTGCCGCCGTTGGGTTTGCAGAATTTGCAGTCAGGAATGTATGTCGTCCCGCCCTGA ATGGCGGAAGCTCCTTCCCTGCTATTTCTATGCACAACCCTAATCAGAGATGAAATTGCTCAAAGGGATGACATTCCAGACGGTGTTTATGATCTTCCTCCTCACCTTTTGGATGTTCTGGCTTCGCAGCTGCCGCCGTTGGGTTTGCAGAATTTGCAGTCAGGAATGTATGTCGTCCCGCCCTGA MAEAPSLLFLCTTLIRDEIAQRDDIPDGVYDLPPHLLDVLASQLPPLGLQNLQSGMYVVPP Homology
BLAST of Sed0003411 vs. NCBI nr
Match: XP_022954282.1 (uncharacterized protein LOC111456584 isoform X1 [Cucurbita moschata] >XP_022954283.1 uncharacterized protein LOC111456584 isoform X1 [Cucurbita moschata]) HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17 Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of Sed0003411 vs. NCBI nr
Match: KAG7014586.1 (T-complex-associated testis-expressed protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17 Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of Sed0003411 vs. NCBI nr
Match: KAG6576068.1 (CLIP-associated protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17 Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of Sed0003411 vs. NCBI nr
Match: XP_023549040.1 (uncharacterized protein LOC111807525 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549041.1 uncharacterized protein LOC111807525 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17 Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of Sed0003411 vs. NCBI nr
Match: KAA0050632.1 (NACHT, LRR and PYD domains-containing protein 5 isoform X3 [Cucumis melo var. makuwa] >TYK07801.1 NACHT, LRR and PYD domains-containing protein 5 isoform X3 [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 7.5e-17 Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of Sed0003411 vs. ExPASy TrEMBL
Match: A0A0A0K6N3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G330380 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.3e-18 Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Sed0003411 vs. ExPASy TrEMBL
Match: A0A6J1GQL7 (uncharacterized protein LOC111456584 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456584 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.3e-17 Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of Sed0003411 vs. ExPASy TrEMBL
Match: A0A5D3C7E3 (NACHT, LRR and PYD domains-containing protein 5 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00940 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.6e-17 Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of Sed0003411 vs. ExPASy TrEMBL
Match: A0A6J1JTJ2 (uncharacterized protein LOC111488203 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488203 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 9.0e-16 Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 0
BLAST of Sed0003411 vs. ExPASy TrEMBL
Match: A0A1S3CFT7 (uncharacterized protein LOC103500467 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500467 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.8e-14 Identity = 41/56 (73.21%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Sed0003411 vs. TAIR 10
Match: AT2G20210.1 (RNI-like superfamily protein ) HSP 1 Score: 48.1 bits (113), Expect = 2.9e-06 Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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