Sed0003408 (gene) Chayote v1

Overview


Name	Sed0003408
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor ILR3-like
Location	LG05: 41083797 .. 41086800 (-)
RNA-Seq Expression	Sed0003408
Synteny	Sed0003408

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACATCACCACCTTCTTCAACCCTCTCAACAACCACCACTAATGGATTACTCCGCCGGAAACTGGAATTGGCTGTTCGATTACTCCGCATCCAACGATCTCGCCCTCGCCGGCGGCCACTTCTCGCCGCCGCAGCCCGCCAGCTTCACCTGGTCCAACCCCTCCATCAACTTTTCATCTAAAGACAGGTGGGGTCTTAACTCCGATTTATTCAACATGGGTAAAATTTGGACACCCTTTATTTCTCTATAATCACTCAATCAGCTTCAATTTAGGATTCTTTTTCTGTTACGAAATAGAAATTGACGAATTTCTCTTGTTGTATTAGTGGGAGACTGTTTATCATCTGTGATAAGATTGCTGTAAGTTTGTGCTCTCTGTGTATGGTAACTGTTTGCTGAAATGCCATGCTATTTTAGGGAAAGATTGAGTTGGTTTGTTTTGCTGTTTTTGTGCCGTTTGGAACTGTTTTCAATGCTTGTTGGGTTGGGTGTTCTTTTTTTTTTTTTTTTTTTTTAATGAACAGTCTTGTTGGGTGTTGGGATGCTTGTATATGGAAGCAAAGTTTATTAGCTGTGGATTTTGGTTTGGTCTTCTCTACTGTGCTATATAGCATGTGACTAACTGGAGAATCTTTTGGCAACCAAGTTCATAATCCATTAAGCATTCCAAATTCCCCTTAACCCCACTTGAACTTTAATTGGTGGGCTTTTTGGATCTACGAGTCTCTATTTTTTGTGTTCAAGATCTTTAAGTCTCTCTTATTCTGTTTCAAACTTGATGTTGAATAAATTACCCAGTGGGGTTATATTGATTCAGTTGGATTCAGGTTGAAAATATATTCAAGTGGAAATTAGCATATATAATACAATAACAATTGGTAGATCTTAACCATTATTGGTTTTCTTTTTCTTTCTTTTTTTTTGTAGGAAATAATTTAATTTGTCTCTTTGTGGATCACGTTATTGTATGGGGTGATTCATGCTGTTTTTGGCTTAAGCTTAAAATATTCCAAATTCTACGGGCAATATTTCAGAGTTTCTATTTCATTAATTACCCGCTAACTCTGTCTCATATGTGTAGAGAATCCTTAATTCATCACTGTATCTCATAGTAAAAGGATAAGTCTTCAAACAATTTATTCTTTTTTATATTTGAGTTACTTCTTTTCTGTGACGAAATGGGGCTGGATCTGTTAAGCCCCTACCATGTTGGAGATGCATGCATGAAATGAGATTATTTTTATCTCATTTTTTCATTGTAATTGGTTGGATATTCATTTTTTTCAGCCTGGAGGTAGACTGCTCTTATGGAGATCTGGACAGCTTACAGGAAGTGGGTCGCAAACGGTAAGTTTTTAATTTTATTAGGTACTCCTGAAAATCCGTCAAATAAATAGGAATCTGATAAGGTTGGGCCTAGGGCTCTACTTAGCCATTACTTGGAGAATAAGTTACTATTTTGTTATAAATAGAGTGGGTTAGGTTAAGGTTTAGGCATCCAAATTATTGAATGAGTTATTGAGTGATTTATTGTAGGGCTCAAGAGATTCTCTTGAGAGGGGAGGTTCTAAGACCTATCAAATCTTGGTTTATCTTGTAATCTTTTATCTTTTGATATAATTTAGATCCCGGATCATATCAGAATCTCTTTGGTGTATAGCTAAACATGGTGAAGTATATTTCTGGTATTATTTGCAAGGAGGTGCAATGTCAACTTGGCCACTGATTCCTTATCTTGTTGGAAATTACGAGTTAACTCACAAATCGAAATGAAAACGTTGACTTTTAGGAGTTCTGCTTGACCATAAATGTTATAGTAGATTCATCATCTTCATCATAATCTCATTCCCAATCCCTTCCAACTCAAGCTAGAAGAAATGAGCAATGGCAGAATTGCAGAAATGTCTCCTCCAAAAACCTGCCATTAGCAATAGAAATAGTCGCCATATTTCAATGGCTTTTTAGGTGATTAGAACTTTGTCGGCATCAACTTACTTACATCCGTTTTATAGATAACATTACCTTTACTGATGTATATTGGTGTAAACTATCTCCAGTATTTCATAATTATAGTTCCAAATGTTATGTAGGCCAAGGGCTGAATCTAGTGCTGTGTCTTCCTCGAAAGCCTGCAGAGAGAAATTGAGAAGAGATAAGCTGAATGAGAGGTATCATATTTTTTTTCTATCAATTATTACTTTATTCTTCAATCTCTTTTTTTATTAATCCACCATCTACCATGATTTCAAGGTTCTTGGAATTGGCTGCTGTCCTGGAACCTGGAAAACCACCCAAAACAGACAAGGTTGCAATCTTAGGTGATGCTATCAGAATGTTGACTGATCTACAAACTGAAACCCAGAAGCTGAAAGAATCTAAGGAGGATTTGAAGGAAAAAATCAAAGAATTAAAGGTGAGGTTGAACGTGAAATTCAATTGACACTTGCTTAATTTTATCTTCTCTTTCATGTACATTTGAGCAATACTTGTATTAGCTGCAATGTTGAATAGTTTAATTGAATCTGATACACAAGCAAGCTGGATTATACTTATTTCTTGATCTCTAAGCTCAGTATGCATTCAGGTTGAGAAAAATGAACTTCGTGATGAGAAGCAAAGGTTGAGAGCAGAGAGAGAAAAGTTGGAGCTGCAAATCAAAGCGGTGAAAACTCGAGCAGCTGACATCCAGCATCCTCCCCCTACAGTTTCAGCTGCATTTACAGCACAAGGGCAAACTGCTGGTAACAAGCTGATGCCTTTCATTGGTTATCCTGGCATTGCCATGTGGCAGTTCTTGCCACCTGCAGCAGTCGACATATCGCAGGATCATGTGCTTCGCCCACCGGTTGCTTAAAGGGGAGGACAAATGATTTGGTTCGTTTATCTATGCTGTTATGATTAACAATGGTTTTATGTGTTTGTGTTTCTTTTCAACCATGTGTTTGGTTTTAACCTGTTGAAGAAGCTCCTGGTGGTATAAACACTTTGTCTAAAGAGTAGCAG

mRNA sequence

TACATCACCACCTTCTTCAACCCTCTCAACAACCACCACTAATGGATTACTCCGCCGGAAACTGGAATTGGCTGTTCGATTACTCCGCATCCAACGATCTCGCCCTCGCCGGCGGCCACTTCTCGCCGCCGCAGCCCGCCAGCTTCACCTGGTCCAACCCCTCCATCAACTTTTCATCTAAAGACAGCCTGGAGGTAGACTGCTCTTATGGAGATCTGGACAGCTTACAGGAAGTGGGTCGCAAACGGCCAAGGGCTGAATCTAGTGCTGTGTCTTCCTCGAAAGCCTGCAGAGAGAAATTGAGAAGAGATAAGCTGAATGAGAGGTTCTTGGAATTGGCTGCTGTCCTGGAACCTGGAAAACCACCCAAAACAGACAAGGTTGCAATCTTAGGTGATGCTATCAGAATGTTGACTGATCTACAAACTGAAACCCAGAAGCTGAAAGAATCTAAGGAGGATTTGAAGGAAAAAATCAAAGAATTAAAGGTTGAGAAAAATGAACTTCGTGATGAGAAGCAAAGGTTGAGAGCAGAGAGAGAAAAGTTGGAGCTGCAAATCAAAGCGGTGAAAACTCGAGCAGCTGACATCCAGCATCCTCCCCCTACAGTTTCAGCTGCATTTACAGCACAAGGGCAAACTGCTGGTAACAAGCTGATGCCTTTCATTGGTTATCCTGGCATTGCCATGTGGCAGTTCTTGCCACCTGCAGCAGTCGACATATCGCAGGATCATGTGCTTCGCCCACCGGTTGCTTAAAGGGGAGGACAAATGATTTGGTTCGTTTATCTATGCTGTTATGATTAACAATGGTTTTATGTGTTTGTGTTTCTTTTCAACCATGTGTTTGGTTTTAACCTGTTGAAGAAGCTCCTGGTGGTATAAACACTTTGTCTAAAGAGTAGCAG

Coding sequence (CDS)

ATGGATTACTCCGCCGGAAACTGGAATTGGCTGTTCGATTACTCCGCATCCAACGATCTCGCCCTCGCCGGCGGCCACTTCTCGCCGCCGCAGCCCGCCAGCTTCACCTGGTCCAACCCCTCCATCAACTTTTCATCTAAAGACAGCCTGGAGGTAGACTGCTCTTATGGAGATCTGGACAGCTTACAGGAAGTGGGTCGCAAACGGCCAAGGGCTGAATCTAGTGCTGTGTCTTCCTCGAAAGCCTGCAGAGAGAAATTGAGAAGAGATAAGCTGAATGAGAGGTTCTTGGAATTGGCTGCTGTCCTGGAACCTGGAAAACCACCCAAAACAGACAAGGTTGCAATCTTAGGTGATGCTATCAGAATGTTGACTGATCTACAAACTGAAACCCAGAAGCTGAAAGAATCTAAGGAGGATTTGAAGGAAAAAATCAAAGAATTAAAGGTTGAGAAAAATGAACTTCGTGATGAGAAGCAAAGGTTGAGAGCAGAGAGAGAAAAGTTGGAGCTGCAAATCAAAGCGGTGAAAACTCGAGCAGCTGACATCCAGCATCCTCCCCCTACAGTTTCAGCTGCATTTACAGCACAAGGGCAAACTGCTGGTAACAAGCTGATGCCTTTCATTGGTTATCCTGGCATTGCCATGTGGCAGTTCTTGCCACCTGCAGCAGTCGACATATCGCAGGATCATGTGCTTCGCCCACCGGTTGCTTAA

Protein sequence

MDYSAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYGDLDSLQEVGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDAIRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRAADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA

Homology

[Close]

BLAST of Sed0003408 vs. NCBI nr
Match: XP_022140291.1 (transcription factor ILR3-like [Momordica charantia])

HSP 1 Score: 401.4 bits (1030), Expect = 5.6e-108
Identity = 204/238 (85.71%), Postives = 219/238 (92.02%), Query Frame = 0


Query: 1   MDYSAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYGDLD 60
           MDYS+GNWNWLFDY+  +D+A+A   FSPPQ  SFTWSNPSINFSSKDSL+VDCS GD D
Sbjct: 1   MDYSSGNWNWLFDYTTMDDIAVAAADFSPPQSISFTWSNPSINFSSKDSLDVDCSCGDQD 60

Query: 61  SLQEVGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDA 120
           SLQEVGRKRPRAE+SA S+SKACREKLRRDKLNERFLELAA+LEPGKPPKTDKVAIL DA
Sbjct: 61  SLQEVGRKRPRAETSAASASKACREKLRRDKLNERFLELAAILEPGKPPKTDKVAILSDA 120

Query: 121 IRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRA 180
           IRM+TDLQ ETQKLKESKEDLK KIKELKVEKNELRDEKQRLRAE+EKLELQIKA  T+A
Sbjct: 121 IRMVTDLQCETQKLKESKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIKAANTQA 180

Query: 181 ADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 239
           AD+Q PP  +SAAFTAQGQ AGNKLMPFIGYPGIAMWQFLPPAA+DISQDHVLRPPVA
Sbjct: 181 ADVQRPPSALSAAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPAAIDISQDHVLRPPVA 238

[Close]

BLAST of Sed0003408 vs. NCBI nr
Match: KAG6604841.1 (Transcription factor ILR3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106
Identity = 208/242 (85.95%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 1   MDYSAGNWNWLFDYSASNDLAL---AGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYG 60
           MDYSAGNWNWLFDYS  +DLA+   A G+FSPPQ   F+WSNPSINFSSKDSLEVDCSYG
Sbjct: 1   MDYSAGNWNWLFDYSTMDDLAVAAAAAGNFSPPQSVGFSWSNPSINFSSKDSLEVDCSYG 60

Query: 61  DLDSLQEVGRKRPRAESSAV-SSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAI 120
           DLD LQEVGRKRP+ E+ AV SS+KACREKLRRDKLNE FLELAAVLEPGKPPKTDKVAI
Sbjct: 61  DLDGLQEVGRKRPKTETGAVASSAKACREKLRRDKLNESFLELAAVLEPGKPPKTDKVAI 120

Query: 121 LGDAIRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAV 180
           L DAIRM+TDLQTETQKLK+SKEDLK KIKELKVEKNELRDEKQRLRAE+EKLELQIK V
Sbjct: 121 LSDAIRMVTDLQTETQKLKQSKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIKGV 180

Query: 181 KTRAADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPP 239
            TRAADI   PPT+S AFTAQGQ AGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPP
Sbjct: 181 NTRAADIHRHPPTLSPAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPP 240

[Close]

BLAST of Sed0003408 vs. NCBI nr
Match: KAG7034954.1 (Transcription factor ILR3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106
Identity = 208/242 (85.95%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 1   MDYSAGNWNWLFDYSASNDLAL---AGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYG 60
           MDYSAGNWNWLFDYS  +DLA+   A G+FSPPQ   F+WSNPSINFSSKDSLEVDCSYG
Sbjct: 1   MDYSAGNWNWLFDYSTMDDLAVAAAAAGNFSPPQSVGFSWSNPSINFSSKDSLEVDCSYG 60

Query: 61  DLDSLQEVGRKRPRAESSAV-SSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAI 120
           DLD LQEVGRKRP+ E+ AV SS+KACREKLRRDKLNE FLELAAVLEPGKPPKTDKVAI
Sbjct: 61  DLDGLQEVGRKRPKTETGAVASSAKACREKLRRDKLNESFLELAAVLEPGKPPKTDKVAI 120

Query: 121 LGDAIRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAV 180
           L DAIRM+TDLQTETQKLK+SKEDLK KIKELKVEKNELRDEKQRLRAE+EKLELQIK V
Sbjct: 121 LSDAIRMVTDLQTETQKLKQSKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIKGV 180

Query: 181 KTRAADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPP 239
            TRAADI   PPT+S AFTAQGQ AGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPP
Sbjct: 181 NTRAADIHRRPPTLSPAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPP 240

[Close]

BLAST of Sed0003408 vs. NCBI nr
Match: XP_038900872.1 (transcription factor ILR3-like [Benincasa hispida])

HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105
Identity = 203/238 (85.29%), Postives = 214/238 (89.92%), Query Frame = 0


Query: 1   MDYSAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYGDLD 60
           MDYS  NWNWLFDYS  +DLA+    FSPPQ  SF+WSNPSINFSS  SLEVDCSY DLD
Sbjct: 1   MDYSPPNWNWLFDYSTMDDLAIVDPRFSPPQSISFSWSNPSINFSSTHSLEVDCSYEDLD 60

Query: 61  SLQEVGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDA 120
           SL+EVGRKR R E+ A S+SKACREK RRDKLNERFLELAAVLEPGKPPKTDKVAIL DA
Sbjct: 61  SLKEVGRKRLRGETGAASTSKACREKQRRDKLNERFLELAAVLEPGKPPKTDKVAILSDA 120

Query: 121 IRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRA 180
           IRM+TDLQ ETQKL+ESKEDLK KIKELKVEKNELRDEKQRLRAE+EKLE+QIKAV TRA
Sbjct: 121 IRMMTDLQCETQKLRESKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLEMQIKAVNTRA 180

Query: 181 ADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 239
           ADIQHPPPT+S AFTAQGQ AGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA
Sbjct: 181 ADIQHPPPTLSTAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 238

[Close]

BLAST of Sed0003408 vs. NCBI nr
Match: XP_023532411.1 (transcription factor ILR3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.1 bits (1006), Expect = 3.4e-105
Identity = 206/244 (84.43%), Postives = 218/244 (89.34%), Query Frame = 0


Query: 1   MDYSAGNWNWLFDYSASNDLAL-----AGGHFSPPQPASFTWSNPSINFSSKDSLEVDCS 60
           MDYSAGNWNWLFDYS  +DLA+     A G+FSPPQ   F+WSNPSINFSSKDSLEVDCS
Sbjct: 1   MDYSAGNWNWLFDYSTMDDLAVAAAAAAAGNFSPPQSVGFSWSNPSINFSSKDSLEVDCS 60

Query: 61  YGDLDSLQEVGRKRPRAES-SAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKV 120
           YGD D LQEVGRKRP+ E+ +A SSSKACREKLRRDKLNE FLELAAVLEPGKPPKTDKV
Sbjct: 61  YGDQDGLQEVGRKRPKTETGAAASSSKACREKLRRDKLNESFLELAAVLEPGKPPKTDKV 120

Query: 121 AILGDAIRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIK 180
           AIL DAIRM+TDLQ+ETQKLK+SKEDLK KIKELKVEKNELRDEKQRLRAE+EKLELQIK
Sbjct: 121 AILSDAIRMVTDLQSETQKLKQSKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIK 180

Query: 181 AVKTRAADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLR 239
            V TRAADI   PPT+S AFTAQGQ AGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLR
Sbjct: 181 GVNTRAADIHRRPPTLSPAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLR 240

[Close]

BLAST of Sed0003408 vs. ExPASy Swiss-Prot
Match: Q9FH37 (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.2e-58
Identity = 132/238 (55.46%), Postives = 166/238 (69.75%), Query Frame = 0


Query: 4   SAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWS-NPSINFSSKDSLEVDCSYGDLDSL 63
           S  N NW+ D   ++      G F+   P  F+W     I  SS  S  VD S G+ ++ 
Sbjct: 3   SPENANWICDLIDAD-----YGSFTIQGP-GFSWPVQQPIGVSSNSSAGVDGSAGNSEAS 62

Query: 64  QEVG-RKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDAI 123
           +E G +KR R ESS+ +SSKACREK RRD+LN++F+EL A+LEPG PPKTDK AIL DA+
Sbjct: 63  KEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAV 122

Query: 124 RMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRAA 183
           RM+T L+ E QKLK+S   L++KIKELK EKNELRDEKQRL+ E+EKLE Q+KA+     
Sbjct: 123 RMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQP 182

Query: 184 DIQHPPPTVSAAF-TAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 239
                PP +  AF +AQGQ  GNK++P I YPG+AMWQF+PPA+VD SQDHVLRPPVA
Sbjct: 183 SFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of Sed0003408 vs. ExPASy Swiss-Prot
Match: Q9C682 (Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-52
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 4   SAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYGDLDSLQ 63
           S  N NWL DY       L  G FS   P +F W    I+ S+  S+EVD    D D ++
Sbjct: 3   SPENTNWLSDY------PLIEGAFSDQNP-TFPW---QIDGSATVSVEVDGFLCDADVIK 62

Query: 64  E-VGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDAIR 123
           E   RKR + ES   S+SKACREK RRD+LN++F EL++VLEPG+ PKTDKVAI+ DAIR
Sbjct: 63  EPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIR 122

Query: 124 MLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRAAD 183
           M+   + E QKLK+    L+EKIKELK EKNELRDEKQ+L+ E+E+++ Q+KA+KT+   
Sbjct: 123 MVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQ--- 182

Query: 184 IQHPPPTV--SAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 239
              P P    +    +Q Q  G+KL+PF  YPG AMWQF+PPAAVD SQDHVLRPPVA
Sbjct: 183 -PQPQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226

[Close]

BLAST of Sed0003408 vs. ExPASy Swiss-Prot
Match: Q8L467 (Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-30
Identity = 87/193 (45.08%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 47  KDSLEVDCSYGDLDSLQEVGRKRPRAES-SAVSSSKACREKLRRDKLNERFLELAAVLEP 106
           ++ L+ DCS           RKR R  S S    +KACRE+LRR+KLNERF++L++VLEP
Sbjct: 111 QEHLDDDCS-----------RKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEP 170

Query: 107 GKPPKTDKVAILGDAIRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAE 166
           G+ PKTDK AIL DAIR+L  L+ E  KL+E+ + L E+IK LK EKNELR+EK  L+A+
Sbjct: 171 GRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKAD 230

Query: 167 REKLELQIKAVKTRAADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAV 226
           +EK E Q+K++   ++      P + AAF        NK+  +  Y  + MW ++P +  
Sbjct: 231 KEKTEQQLKSMTAPSSGF---IPHIPAAFN------HNKMAVYPSYGYMPMWHYMPQSVR 283

Query: 227 DISQDHVLRPPVA 239
           D S+D  LRPP A
Sbjct: 291 DTSRDQELRPPAA 283

[Close]

BLAST of Sed0003408 vs. ExPASy Swiss-Prot
Match: Q9LTC7 (Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-28
Identity = 83/180 (46.11%), Postives = 115/180 (63.89%), Query Frame = 0


Query: 63  QEVGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDAIR 122
           +E   KR R  S +   +KACREKLRR+KLN++F++L++VLEPG+ PKTDK AIL DAIR
Sbjct: 149 EECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIR 208

Query: 123 MLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRAAD 182
           ++  L+ E  +L+E+ + L E+IK LK +KNELR+EK  L+AE+EK+E Q+K++   +  
Sbjct: 209 VVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPG 268

Query: 183 I---QHPPPTVSAAFTAQGQTAGNKLMPFIGY-PGIAMWQFLPPAAVDISQDHVLRPPVA 239
               QHP     AAF +          P+  Y P + MW  LPPA  D S+D    PPVA
Sbjct: 269 FMPSQHP-----AAFHSHKMAVA---YPYGYYPPNMPMWSPLPPADRDTSRDLKNLPPVA 320

[Close]

BLAST of Sed0003408 vs. ExPASy Swiss-Prot
Match: Q8W2F2 (Transcription factor bHLH11 OS=Arabidopsis thaliana OX=3702 GN=BHLH11 PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.8e-13
Identity = 54/130 (41.54%), Postives = 79/130 (60.77%), Query Frame = 0


Query: 73  ESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDAIRMLTDLQTETQ 132
           +  AV S KA REKLRRDKL E+FLEL   L+P + PK+DK ++L D I+ML D+  +  
Sbjct: 41  KKEAVCSQKAEREKLRRDKLKEQFLELGNALDPNR-PKSDKASVLTDTIQMLKDVMNQVD 100

Query: 133 KLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIK-AVKTRAADIQHPPPTVS 192
           +LK   E L ++ +EL  EK+ELR+EK  L+++ E L  Q +  +KT    + H    + 
Sbjct: 101 RLKAEYETLSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPWVPHYSYHIP 160

Query: 193 AAFTAQGQTA 202
                QGQ++
Sbjct: 161 FVAITQGQSS 169

[Close]

BLAST of Sed0003408 vs. ExPASy TrEMBL
Match: A0A6J1CFN5 (transcription factor ILR3-like OS=Momordica charantia OX=3673 GN=LOC111010995 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.7e-108
Identity = 204/238 (85.71%), Postives = 219/238 (92.02%), Query Frame = 0


Query: 1   MDYSAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYGDLD 60
           MDYS+GNWNWLFDY+  +D+A+A   FSPPQ  SFTWSNPSINFSSKDSL+VDCS GD D
Sbjct: 1   MDYSSGNWNWLFDYTTMDDIAVAAADFSPPQSISFTWSNPSINFSSKDSLDVDCSCGDQD 60

Query: 61  SLQEVGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDA 120
           SLQEVGRKRPRAE+SA S+SKACREKLRRDKLNERFLELAA+LEPGKPPKTDKVAIL DA
Sbjct: 61  SLQEVGRKRPRAETSAASASKACREKLRRDKLNERFLELAAILEPGKPPKTDKVAILSDA 120

Query: 121 IRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRA 180
           IRM+TDLQ ETQKLKESKEDLK KIKELKVEKNELRDEKQRLRAE+EKLELQIKA  T+A
Sbjct: 121 IRMVTDLQCETQKLKESKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIKAANTQA 180

Query: 181 ADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 239
           AD+Q PP  +SAAFTAQGQ AGNKLMPFIGYPGIAMWQFLPPAA+DISQDHVLRPPVA
Sbjct: 181 ADVQRPPSALSAAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPAAIDISQDHVLRPPVA 238

[Close]

BLAST of Sed0003408 vs. ExPASy TrEMBL
Match: A0A6J1G8R0 (transcription factor ILR3-like OS=Cucurbita moschata OX=3662 GN=LOC111451848 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.2e-105
Identity = 205/242 (84.71%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MDYSAGNWNWLFDYSASNDLAL---AGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYG 60
           MDYSAGNWNWLFDYS  +DLA+   A G+FSPPQ   F+WSNPSINFSSKDSLEVDCSYG
Sbjct: 1   MDYSAGNWNWLFDYSTMDDLAVAAAAAGNFSPPQSVGFSWSNPSINFSSKDSLEVDCSYG 60

Query: 61  DLDSLQEVGRKRPRAESSAV-SSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAI 120
           DLD LQEVGRKRP+ E+ AV SS+KACREKLRRDKLNE FLELAAVLEPGKPPKTDKVAI
Sbjct: 61  DLDGLQEVGRKRPKTETGAVASSTKACREKLRRDKLNESFLELAAVLEPGKPPKTDKVAI 120

Query: 121 LGDAIRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAV 180
           L DAIRM+TDLQT TQKLK+SKEDLK KIKELKVEKNELRDEKQRLRAE+EKLELQIK V
Sbjct: 121 LSDAIRMVTDLQTATQKLKQSKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIKGV 180

Query: 181 KTRAADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPP 239
            TRAADI   PPT+S AFTAQGQ AG+KLMP IGYPGIAMWQFLPPAAVDISQDHVLRPP
Sbjct: 181 NTRAADIHRRPPTLSPAFTAQGQAAGHKLMPLIGYPGIAMWQFLPPAAVDISQDHVLRPP 240

[Close]

BLAST of Sed0003408 vs. ExPASy TrEMBL
Match: A0A0A0LQH8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G423590 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.4e-104
Identity = 201/238 (84.45%), Postives = 215/238 (90.34%), Query Frame = 0


Query: 1   MDYSAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYGDLD 60
           MD    NWNWLFDYS  +DLA+    FSPPQ  SF+WSNPSINF SKDSLEVDCSY DLD
Sbjct: 1   MDNPPPNWNWLFDYSTVDDLAVVDPRFSPPQSISFSWSNPSINFLSKDSLEVDCSYEDLD 60

Query: 61  SLQEVGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDA 120
           S +EVGRKR R E+SA S+SKACREK RRDKLNERFLELAAVLEPGKPPK+DKVAIL DA
Sbjct: 61  STKEVGRKRLRGETSAASTSKACREKQRRDKLNERFLELAAVLEPGKPPKSDKVAILSDA 120

Query: 121 IRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRA 180
           IRM+TDLQ ETQKL+ESKEDLK KIKELKVEKNELRDEKQRLRAE+EKLELQI+AV TRA
Sbjct: 121 IRMMTDLQCETQKLRESKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIRAVNTRA 180

Query: 181 ADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 239
           AD+QHPPPT+SAAFTAQGQ+AGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA
Sbjct: 181 ADVQHPPPTLSAAFTAQGQSAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 238

[Close]

BLAST of Sed0003408 vs. ExPASy TrEMBL
Match: A0A5D3BGF0 (Transcription factor ILR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00470 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 201/238 (84.45%), Postives = 214/238 (89.92%), Query Frame = 0


Query: 1   MDYSAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYGDLD 60
           MDY   NWNWLFD S  +DLA+    FSPPQ  SF+WSNPSI+F SKDSLEVDCSY DLD
Sbjct: 1   MDYPPPNWNWLFDCSTMDDLAVVDPRFSPPQSISFSWSNPSISFVSKDSLEVDCSYEDLD 60

Query: 61  SLQEVGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDA 120
           S +EVGRKR R E+SA S+SKACREK RRDKLNERFLELAAVLEPGKPPKTDKVAIL DA
Sbjct: 61  STKEVGRKRLRGETSAASTSKACREKQRRDKLNERFLELAAVLEPGKPPKTDKVAILSDA 120

Query: 121 IRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRA 180
           IRM+TDLQ ETQKL+ESKEDLK KIKELKVEKNELRDEKQRLRAE+EKLELQI+AV TRA
Sbjct: 121 IRMMTDLQCETQKLRESKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIRAVNTRA 180

Query: 181 ADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 239
           AD+QHPPPT+SAAFTAQGQ AGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA
Sbjct: 181 ADVQHPPPTLSAAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 238

[Close]

BLAST of Sed0003408 vs. ExPASy TrEMBL
Match: A0A1S3C2I2 (transcription factor ILR3-like OS=Cucumis melo OX=3656 GN=LOC103495930 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 201/238 (84.45%), Postives = 214/238 (89.92%), Query Frame = 0


Query: 1   MDYSAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYGDLD 60
           MDY   NWNWLFD S  +DLA+    FSPPQ  SF+WSNPSI+F SKDSLEVDCSY DLD
Sbjct: 1   MDYPPPNWNWLFDCSTMDDLAVVDPRFSPPQSISFSWSNPSISFVSKDSLEVDCSYEDLD 60

Query: 61  SLQEVGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDA 120
           S +EVGRKR R E+SA S+SKACREK RRDKLNERFLELAAVLEPGKPPKTDKVAIL DA
Sbjct: 61  STKEVGRKRLRGETSAASTSKACREKQRRDKLNERFLELAAVLEPGKPPKTDKVAILSDA 120

Query: 121 IRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRA 180
           IRM+TDLQ ETQKL+ESKEDLK KIKELKVEKNELRDEKQRLRAE+EKLELQI+AV TRA
Sbjct: 121 IRMMTDLQCETQKLRESKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIRAVNTRA 180

Query: 181 ADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 239
           AD+QHPPPT+SAAFTAQGQ AGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA
Sbjct: 181 ADVQHPPPTLSAAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 238

[Close]

BLAST of Sed0003408 vs. TAIR 10
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 226.1 bits (575), Expect = 3.0e-59
Identity = 132/238 (55.46%), Postives = 166/238 (69.75%), Query Frame = 0


Query: 4   SAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWS-NPSINFSSKDSLEVDCSYGDLDSL 63
           S  N NW+ D   ++      G F+   P  F+W     I  SS  S  VD S G+ ++ 
Sbjct: 3   SPENANWICDLIDAD-----YGSFTIQGP-GFSWPVQQPIGVSSNSSAGVDGSAGNSEAS 62

Query: 64  QEVG-RKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDAI 123
           +E G +KR R ESS+ +SSKACREK RRD+LN++F+EL A+LEPG PPKTDK AIL DA+
Sbjct: 63  KEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAV 122

Query: 124 RMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRAA 183
           RM+T L+ E QKLK+S   L++KIKELK EKNELRDEKQRL+ E+EKLE Q+KA+     
Sbjct: 123 RMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQP 182

Query: 184 DIQHPPPTVSAAF-TAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 239
                PP +  AF +AQGQ  GNK++P I YPG+AMWQF+PPA+VD SQDHVLRPPVA
Sbjct: 183 SFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of Sed0003408 vs. TAIR 10
Match: AT1G51070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.4e-53
Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 4   SAGNWNWLFDYSASNDLALAGGHFSPPQPASFTWSNPSINFSSKDSLEVDCSYGDLDSLQ 63
           S  N NWL DY       L  G FS   P +F W    I+ S+  S+EVD    D D ++
Sbjct: 3   SPENTNWLSDY------PLIEGAFSDQNP-TFPW---QIDGSATVSVEVDGFLCDADVIK 62

Query: 64  E-VGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLEPGKPPKTDKVAILGDAIR 123
           E   RKR + ES   S+SKACREK RRD+LN++F EL++VLEPG+ PKTDKVAI+ DAIR
Sbjct: 63  EPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIR 122

Query: 124 MLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAEREKLELQIKAVKTRAAD 183
           M+   + E QKLK+    L+EKIKELK EKNELRDEKQ+L+ E+E+++ Q+KA+KT+   
Sbjct: 123 MVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQ--- 182

Query: 184 IQHPPPTV--SAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 239
              P P    +    +Q Q  G+KL+PF  YPG AMWQF+PPAAVD SQDHVLRPPVA
Sbjct: 183 -PQPQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226

[Close]

BLAST of Sed0003408 vs. TAIR 10
Match: AT1G51070.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-50
Identity = 112/196 (57.14%), Postives = 143/196 (72.96%), Query Frame = 0


Query: 46  SKDSLEVDCSYGDLDSLQE-VGRKRPRAESSAVSSSKACREKLRRDKLNERFLELAAVLE 105
           +K S+EVD    D D ++E   RKR + ES   S+SKACREK RRD+LN++F EL++VLE
Sbjct: 101 AKGSVEVDGFLCDADVIKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLE 160

Query: 106 PGKPPKTDKVAILGDAIRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRA 165
           PG+ PKTDKVAI+ DAIRM+   + E QKLK+    L+EKIKELK EKNELRDEKQ+L+ 
Sbjct: 161 PGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKV 220

Query: 166 EREKLELQIKAVKTRAADIQHPPPTV--SAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPP 225
           E+E+++ Q+KA+KT+      P P    +    +Q Q  G+KL+PF  YPG AMWQF+PP
Sbjct: 221 EKERIDQQLKAIKTQ----PQPQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQFMPP 280

Query: 226 AAVDISQDHVLRPPVA 239
           AAVD SQDHVLRPPVA
Sbjct: 281 AAVDTSQDHVLRPPVA 292

[Close]

BLAST of Sed0003408 vs. TAIR 10
Match: AT4G14410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 87/193 (45.08%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 47  KDSLEVDCSYGDLDSLQEVGRKRPRAES-SAVSSSKACREKLRRDKLNERFLELAAVLEP 106
           ++ L+ DCS           RKR R  S S    +KACRE+LRR+KLNERF++L++VLEP
Sbjct: 111 QEHLDDDCS-----------RKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEP 170

Query: 107 GKPPKTDKVAILGDAIRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAE 166
           G+ PKTDK AIL DAIR+L  L+ E  KL+E+ + L E+IK LK EKNELR+EK  L+A+
Sbjct: 171 GRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKAD 230

Query: 167 REKLELQIKAVKTRAADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAV 226
           +EK E Q+K++   ++      P + AAF        NK+  +  Y  + MW ++P +  
Sbjct: 231 KEKTEQQLKSMTAPSSGF---IPHIPAAFN------HNKMAVYPSYGYMPMWHYMPQSVR 283

Query: 227 DISQDHVLRPPVA 239
           D S+D  LRPP A
Sbjct: 291 DTSRDQELRPPAA 283

[Close]

BLAST of Sed0003408 vs. TAIR 10
Match: AT4G14410.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 87/193 (45.08%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 47  KDSLEVDCSYGDLDSLQEVGRKRPRAES-SAVSSSKACREKLRRDKLNERFLELAAVLEP 106
           ++ L+ DCS           RKR R  S S    +KACRE+LRR+KLNERF++L++VLEP
Sbjct: 105 QEHLDDDCS-----------RKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEP 164

Query: 107 GKPPKTDKVAILGDAIRMLTDLQTETQKLKESKEDLKEKIKELKVEKNELRDEKQRLRAE 166
           G+ PKTDK AIL DAIR+L  L+ E  KL+E+ + L E+IK LK EKNELR+EK  L+A+
Sbjct: 165 GRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKAD 224

Query: 167 REKLELQIKAVKTRAADIQHPPPTVSAAFTAQGQTAGNKLMPFIGYPGIAMWQFLPPAAV 226
           +EK E Q+K++   ++      P + AAF        NK+  +  Y  + MW ++P +  
Sbjct: 225 KEKTEQQLKSMTAPSSGF---IPHIPAAFN------HNKMAVYPSYGYMPMWHYMPQSVR 277

Query: 227 DISQDHVLRPPVA 239
           D S+D  LRPP A
Sbjct: 285 DTSRDQELRPPAA 277

The following BLAST results are available for this feature:

BLAST of Sed0003408 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140291.1	5.6e-108	85.71	transcription factor ILR3-like [Momordica charantia]	[more]
KAG6604841.1	1.4e-106	85.95	Transcription factor ILR3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7034954.1	1.4e-106	85.95	Transcription factor ILR3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038900872.1	1.5e-105	85.29	transcription factor ILR3-like [Benincasa hispida]	[more]
XP_023532411.1	3.4e-105	84.43	transcription factor ILR3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0003408 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH37	4.2e-58	55.46	Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1	[more]
Q9C682	2.0e-52	53.36	Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=...	[more]
Q8L467	1.7e-30	45.08	Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=...	[more]
Q9LTC7	3.5e-28	46.11	Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1	[more]
Q8W2F2	1.8e-13	41.54	Transcription factor bHLH11 OS=Arabidopsis thaliana OX=3702 GN=BHLH11 PE=2 SV=2	[more]

BLAST of Sed0003408 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFN5	2.7e-108	85.71	transcription factor ILR3-like OS=Momordica charantia OX=3673 GN=LOC111010995 PE...	[more]
A0A6J1G8R0	6.2e-105	84.71	transcription factor ILR3-like OS=Cucurbita moschata OX=3662 GN=LOC111451848 PE=...	[more]
A0A0A0LQH8	1.4e-104	84.45	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G423590 PE=4 S...	[more]
A0A5D3BGF0	1.8e-104	84.45	Transcription factor ILR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C2I2	1.8e-104	84.45	transcription factor ILR3-like OS=Cucumis melo OX=3656 GN=LOC103495930 PE=4 SV=1	[more]

BLAST of Sed0003408 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54680.1	3.0e-59	55.46	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.1	1.4e-53	53.36	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.2	1.1e-50	57.14	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G14410.1	1.2e-31	45.08	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G14410.2	1.2e-31	45.08	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..179
None	No IPR available	PANTHER	PTHR46133:SF10	BHLH DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 4..238
None	No IPR available	CDD	cd14686	bZIP	coord: 142..174 e-value: 0.00579349 score: 32.1321
None	No IPR available	CDD	cd11446	bHLH_AtILR3_like	coord: 81..156 e-value: 5.87452E-38 score: 125.523
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 82..133 e-value: 1.6E-9 score: 47.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 80..128 e-value: 3.7E-9 score: 36.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 76..127 score: 12.696644
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 79..151 e-value: 4.8E-12 score: 47.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 81..152
IPR044818	Transcription factor ILR3-like	PANTHER	PTHR46133	BHLH TRANSCRIPTION FACTOR	coord: 4..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003408.1	Sed0003408.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity