Sed0003298 (gene) Chayote v1

Overview


Name	Sed0003298
Type	gene
Organism	Sechium edule (Chayote v1)
Description	AP2/ERF domain-containing transcription factor, putative
Location	LG09: 4922311 .. 4923155 (+)
RNA-Seq Expression	Sed0003298
Synteny	Sed0003298

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTCGTTTCAAATTCCGCGATCGCCGCTTCGTCACCGGCAAACCCCTTCCGCCGCACTCCGCCGCGCCGAGAATCGTCCGGATCTCCGTTGCCGACTCCGACGCCACCGATTCCGACGAAGCCGACGCCGACGCCGACGAACTCCTCCGTCTCGTCTACGAGATTCACTTCCAAGACTCTTCGCTGCAGAAGAAGAGGTTAAACGAATCCGTCGAGCCGGTCAAGAAATTCCGAGGAGTGCGGCGGCGGCGGTGGGGGAGATTCGCGGCGGAGATTCGAGATCCGGTCAACCGCACCAGAGTCTGGCTCGGAACCTTCGATTCTCAAGAGGAAGCCGCAATCGCCTACGACGAAGCGGCGATTCGATTCCGAGGTGCCGATGCGGTAACGAGCATTCTAACGCCGCCGCAACGGAATCCGGTGCCGGCGGAGGAAACCGGTGGAGAGACGGCGGTGCTCTGTTCTCCGACGTCGGTTCTGTGTGGCGGAGATTGGTGCGGTGCGGCGGAGATGACCGGAGATGAGATGGAGTTTTGTGAGCGGCCGCCGCAACGGAATCTGGCGCCGGCGAAGGAGATCGACGCTGTCTCCGGCGGAGGAACGGCGGCGCTCTGTTCTCCGATCTCGGTTCTGAGGGACGGAGATTGGTACGGTGCGGTGGAGATGATCGGCGATGAGTTTTACGACCGGCCGCCGAGGATATTTGTGGAGGAAACGAGTTTTCCGCCGCCGCAGACGACGGCGTTTTACGGCGGTTTTTCGGACGGCGGCGTAGACGGGAATTTCGGGTCATGTAAATGGAATGTTGAGGATTTATTTTGAAGAAGATGAAGTTTTCG

mRNA sequence

ATGTCTTCTCGTTTCAAATTCCGCGATCGCCGCTTCGTCACCGGCAAACCCCTTCCGCCGCACTCCGCCGCGCCGAGAATCGTCCGGATCTCCGTTGCCGACTCCGACGCCACCGATTCCGACGAAGCCGACGCCGACGCCGACGAACTCCTCCGTCTCGTCTACGAGATTCACTTCCAAGACTCTTCGCTGCAGAAGAAGAGGTTAAACGAATCCGTCGAGCCGGTCAAGAAATTCCGAGGAGTGCGGCGGCGGCGGTGGGGGAGATTCGCGGCGGAGATTCGAGATCCGGTCAACCGCACCAGAGTCTGGCTCGGAACCTTCGATTCTCAAGAGGAAGCCGCAATCGCCTACGACGAAGCGGCGATTCGATTCCGAGGTGCCGATGCGGTAACGAGCATTCTAACGCCGCCGCAACGGAATCCGGTGCCGGCGGAGGAAACCGGTGGAGAGACGGCGGTGCTCTGTTCTCCGACGTCGGTTCTGTGTGGCGGAGATTGGTGCGGTGCGGCGGAGATGACCGGAGATGAGATGGAGTTTTGTGAGCGGCCGCCGCAACGGAATCTGGCGCCGGCGAAGGAGATCGACGCTGTCTCCGGCGGAGGAACGGCGGCGCTCTGTTCTCCGATCTCGGTTCTGAGGGACGGAGATTGGTACGGTGCGGTGGAGATGATCGGCGATGAGTTTTACGACCGGCCGCCGAGGATATTTGTGGAGGAAACGAGTTTTCCGCCGCCGCAGACGACGGCGTTTTACGGCGGTTTTTCGGACGGCGGCGTAGACGGGAATTTCGGGTCATGTAAATGGAATGTTGAGGATTTATTTTGAAGAAGATGAAGTTTTCG

Coding sequence (CDS)

ATGTCTTCTCGTTTCAAATTCCGCGATCGCCGCTTCGTCACCGGCAAACCCCTTCCGCCGCACTCCGCCGCGCCGAGAATCGTCCGGATCTCCGTTGCCGACTCCGACGCCACCGATTCCGACGAAGCCGACGCCGACGCCGACGAACTCCTCCGTCTCGTCTACGAGATTCACTTCCAAGACTCTTCGCTGCAGAAGAAGAGGTTAAACGAATCCGTCGAGCCGGTCAAGAAATTCCGAGGAGTGCGGCGGCGGCGGTGGGGGAGATTCGCGGCGGAGATTCGAGATCCGGTCAACCGCACCAGAGTCTGGCTCGGAACCTTCGATTCTCAAGAGGAAGCCGCAATCGCCTACGACGAAGCGGCGATTCGATTCCGAGGTGCCGATGCGGTAACGAGCATTCTAACGCCGCCGCAACGGAATCCGGTGCCGGCGGAGGAAACCGGTGGAGAGACGGCGGTGCTCTGTTCTCCGACGTCGGTTCTGTGTGGCGGAGATTGGTGCGGTGCGGCGGAGATGACCGGAGATGAGATGGAGTTTTGTGAGCGGCCGCCGCAACGGAATCTGGCGCCGGCGAAGGAGATCGACGCTGTCTCCGGCGGAGGAACGGCGGCGCTCTGTTCTCCGATCTCGGTTCTGAGGGACGGAGATTGGTACGGTGCGGTGGAGATGATCGGCGATGAGTTTTACGACCGGCCGCCGAGGATATTTGTGGAGGAAACGAGTTTTCCGCCGCCGCAGACGACGGCGTTTTACGGCGGTTTTTCGGACGGCGGCGTAGACGGGAATTTCGGGTCATGTAAATGGAATGTTGAGGATTTATTTTGA

Protein sequence

MSSRFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATDSDEADADADELLRLVYEIHFQDSSLQKKRLNESVEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAIAYDEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAVLCSPTSVLCGGDWCGAAEMTGDEMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISVLRDGDWYGAVEMIGDEFYDRPPRIFVEETSFPPPQTTAFYGGFSDGGVDGNFGSCKWNVEDLF

Homology

[Close]

BLAST of Sed0003298 vs. NCBI nr
Match: XP_038886548.1 (ethylene-responsive transcription factor CRF6-like [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 5.0e-60
Identity = 152/288 (52.78%), Postives = 178/288 (61.81%), Query Frame = 0


Query: 3   SRFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATD---SDEADADADELLRLV----Y 62
           SRFKFR+RR VTG  LP  S APRIVRI V DSDATD   SD+ D DA +L+RLV     
Sbjct: 6   SRFKFRERRSVTGMSLPADSTAPRIVRILVTDSDATDTSSSDDDDNDA-QLVRLVSRHIN 65

Query: 63  EIHFQDSSLQKKRLNESVEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAA 122
           EIH  +S+  K +    V+P+KKFRGVRRR WG+FAAEIRDP  RTR+WLGT+DS EEAA
Sbjct: 66  EIHLHNSTHSKLK---EVKPIKKFRGVRRRPWGKFAAEIRDPNKRTRIWLGTYDSPEEAA 125

Query: 123 IAYDEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAVLCSPTSVLCGGDWCGAAEMTG 182
           I YD+AAIRFRG DA+T+IL PPQRNP P E                    +  + ++T 
Sbjct: 126 IVYDQAAIRFRGPDALTNILKPPQRNPPPEE-------------------IYDSSMQITD 185

Query: 183 DEMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISVLRDGDW-YGAVEMIGDE-----F 242
           D                  + AVSGGG     SP S+LRD DW   A EM+GDE     +
Sbjct: 186 D------------------LSAVSGGG--MWFSPTSILRDDDWNAAAAEMLGDEMELMDY 245

Query: 243 YDRPPRIFVEETSFPPPQTTAFYGGFSDGGV--DGNFGSCKWNVEDLF 276
           Y RPPRIF+EETSF  P+   F GGF DG V  DGNFGSCKW+V   F
Sbjct: 246 YYRPPRIFLEETSF--PEMAMFCGGFCDGAVDLDGNFGSCKWDVGTYF 248

[Close]

BLAST of Sed0003298 vs. NCBI nr
Match: XP_008445792.1 (PREDICTED: ethylene-responsive transcription factor CRF6-like [Cucumis melo] >KAA0032996.1 ethylene-responsive transcription factor CRF6-like [Cucumis melo var. makuwa])

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-57
Identity = 148/286 (51.75%), Postives = 172/286 (60.14%), Query Frame = 0


Query: 3   SRFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATDSDEADADAD--ELLRLV----YE 62
           SRFKFR+RR VTG  LPP SAAPRI+RI V DSDATD+  +D D D  +LLRLV     E
Sbjct: 6   SRFKFRERRSVTGITLPPDSAAPRILRIFVTDSDATDTSSSDDDDDDAQLLRLVRRHINE 65

Query: 63  IHFQDSSLQKKRLNESVEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAI 122
           IHF DS+  K      ++P KKFRGVRRR WG+FAAEIRDP+ RTR+WLGTFDS EEAAI
Sbjct: 66  IHFHDSTHSKP---NELQPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEEAAI 125

Query: 123 AYDEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAVLCSPTSVLCGGDWCGAAEMTGD 182
            YD+AAIRFRG DA+T+I+ PPQRN +P EE       +C                    
Sbjct: 126 VYDQAAIRFRGPDALTNIIKPPQRN-LPPEE-------ICD------------------S 185

Query: 183 EMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISVLRDGDWYGAVEMIGDEF-----YD 242
            ME  E                 GGG    CSP SVLRD D++ A E++GDE      Y 
Sbjct: 186 SMEIAE----------------DGGGMR--CSPTSVLRD-DYWSATELLGDEMEFMDNYY 241

Query: 243 RPPRIFVEETSFPPPQTTAFYGGFSDGGV--DGNFGSCKWNVEDLF 276
             PRIFVEE S   P+T  F GG  +G V  DGNFGSCKW+V   F
Sbjct: 246 GAPRIFVEERSI--PETAMFCGGLWEGAVDLDGNFGSCKWDVGTCF 241

[Close]

BLAST of Sed0003298 vs. NCBI nr
Match: XP_011656563.1 (ethylene-responsive transcription factor CRF6 [Cucumis sativus] >KGN46011.1 hypothetical protein Csa_005043 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-55
Identity = 148/287 (51.57%), Postives = 171/287 (59.58%), Query Frame = 0


Query: 3   SRFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATD---SDEADADADELLRLV----Y 62
           SRFKFR+RR VTG  LPP  AAPRI+RI V DSDATD   SD+ D D   LLRLV     
Sbjct: 6   SRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHIN 65

Query: 63  EIHFQDSSLQKKRLNESVEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAA 122
           EI F DS+  K      + P KKFRGVRRR WG+FAAEIRDP+ RTR+WLGTFDS EEAA
Sbjct: 66  EIRFHDSTHSKP---NEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEEAA 125

Query: 123 IAYDEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAVLCSPTSVLCGGDWCGAAEMTG 182
           I YD+AAIRFRG DA+T+I+ PP RN VPAEE       +C             + E+T 
Sbjct: 126 IVYDQAAIRFRGPDALTNIVKPPPRN-VPAEE-------ICD-----------SSMEITE 185

Query: 183 DEMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISVLRDGDWYGAVEMIGDEF-----Y 242
           D                       GGG    CSP SVLRD +++ A E++GDE      Y
Sbjct: 186 D-----------------------GGGMR--CSPTSVLRD-EYWRATEVLGDEMELMDNY 242

Query: 243 DRPPRIFVEETSFPPPQTTAFYGGFSDGGV--DGNFGSCKWNVEDLF 276
            R PRIFVEE S   P+T  F GG  +G V  DGNFGSCKW+V   F
Sbjct: 246 YRAPRIFVEERSL--PETAMFCGGLWEGSVDLDGNFGSCKWDVGTCF 242

[Close]

BLAST of Sed0003298 vs. NCBI nr
Match: XP_022150419.1 (ethylene-responsive transcription factor CRF2-like [Momordica charantia])

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-40
Identity = 126/286 (44.06%), Postives = 152/286 (53.15%), Query Frame = 0


Query: 3   SRFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATD--SDEADADADELLRLVYEIHFQ 62
           SR +FR+RR VTGK L       RIVRISV D+DATD  S E       + R V EI F 
Sbjct: 6   SRVRFRERRSVTGK-LLRQLPGTRIVRISVTDADATDTSSGEESEFVRRVSRRVNEIRFD 65

Query: 63  DSSLQKKRLNESVE--PVK------KFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQE 122
           D S  K+R  +     P K      KFR VRRR+WG++AAEIRDP+ R RVWLGTFDS E
Sbjct: 66  DFSSPKQRTAKQGRDFPAKGESGGMKFRCVRRRQWGKWAAEIRDPIKRARVWLGTFDSPE 125

Query: 123 EAAIAYDEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAVLCSPTSVL-CGGDWCGAA 182
           EAA+ YD AAI+FRG DA+T+I+ PP+RNP P E +        SPTSVL    +W  A 
Sbjct: 126 EAAMVYDRAAIQFRGPDALTNIVKPPERNPPPPENS--SDCGYDSPTSVLRSPPEWSAAE 185

Query: 183 EMTGDEMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISVLRDGDWYGAVEMIGDEFYD 242
           E  GDE EF +   QR +                                          
Sbjct: 186 EFVGDEFEFLD---QRFVE---------------------------------------CH 244

Query: 243 RPPRIFVEETSFPPPQTTAFYGGFSDG--GVDGNFGSCKWNVEDLF 276
           RP  IF+EETS   P+T  + GGF DG   +DGNFGS KW+V+  F
Sbjct: 246 RPAPIFLEETSV--PETAIWGGGFCDGPADLDGNFGSWKWDVDSYF 244

[Close]

BLAST of Sed0003298 vs. NCBI nr
Match: EOX95789.1 (AP2/ERF domain-containing transcription factor, putative [Theobroma cacao])

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-31
Identity = 119/325 (36.62%), Postives = 155/325 (47.69%), Query Frame = 0


Query: 2   SSRFKFRDRRFVTGKPLPPHS---------AAPRIVRISVADSDATD--SDEADADAD-E 61
           S R K+ +RR VT K + P S          APRIVRISV D DATD  SDE++ + +  
Sbjct: 6   SFRVKYAERRRVTNKLVKPSSKWFSMESSAKAPRIVRISVTDGDATDSSSDESEHERNHR 65

Query: 62  LLRLVYEIHFQDSSL---------QKKRLNESVEPVK---------------KFRGVRRR 121
           + R V EI  +D S          Q K+ N    PV                K+RGVR+R
Sbjct: 66  VKRYVNEIRIEDCSTFNFSKSANKQNKQTNSKCNPVNIRSKKQQQQCLSTGVKYRGVRQR 125

Query: 122 RWGRFAAEIRDPVNRTRVWLGTFDSQEEAAIAYDEAAIRFRGADAVTSILTPPQRNPVPA 181
            WGR+AAEIRDP +RTRVWLGT+D+ EEAA+ YD AAIR +G DA+T+ + PP R   P 
Sbjct: 126 PWGRWAAEIRDPTSRTRVWLGTYDTAEEAALVYDRAAIRIKGPDALTNFVKPPVRPSSPE 185

Query: 182 EE--------TGGETAVLCSPTSVLCGGDWCGAAEMTGDEMEFCE------RPPQ-RNLA 241
            E        +G E+  LCSPTSVL       A   T  + + CE      RP Q R   
Sbjct: 186 IELETISGYDSGQESQSLCSPTSVLRFQSNEEAELQTESKDDSCELTESEWRPVQERPEE 245

Query: 242 PAKEIDAVSGGGTAALCSPISVLRDGDWYGAVEMIGDEFYDRPPRIFVEETSFPPPQTTA 276
           P    D        ALC         D++           D    IF++E   P  +   
Sbjct: 246 PTNLSDGYLLTDPGALC---------DYFDC---------DNLAPIFLDEMRLPEERNLE 305

[Close]

BLAST of Sed0003298 vs. ExPASy Swiss-Prot
Match: Q9M374 (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana OX=3702 GN=CRF6 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.5e-30
Identity = 111/315 (35.24%), Postives = 151/315 (47.94%), Query Frame = 0


Query: 4   RFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATDSDEADADADELL------RLVYEI 63
           R KF + R VT     P + +PR+VRI+V D  ATDS   D D + +       R V EI
Sbjct: 7   RVKFTENRTVTNVAATPSNGSPRLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKEI 66

Query: 64  HF------------------QDSSLQKKRLNESVEPVKKFRGVRRRRWGRFAAEIRDPVN 123
            F                  ++S + +  ++ SV+P KK+RGVR+R WG+FAAEIRDP +
Sbjct: 67  RFCQGESSSSTAARKGKHKEEESVVVEDDVSTSVKP-KKYRGVRQRPWGKFAAEIRDPSS 126

Query: 124 RTRVWLGTFDSQEEAAIAYDEAAIRFRGADAVTSILTPPQRNPVPAEET-------GGET 183
           RTR+WLGTF + EEAAIAYD AAI  +G  A+T+ LTPP   PV   +T           
Sbjct: 127 RTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSACDYGRDSR 186

Query: 184 AVLCSPTSVLCGGDWCGAAEMTGDEMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISV 243
             L SPTSVL         E T  E+E  E  P+R     KE +  S G          V
Sbjct: 187 QSLHSPTSVL----RFNVNEETEHEIEAIELSPERKSTVIKEEEESSAG---------LV 246

Query: 244 LRDGDWYGAVEMIGDEFYD---RPPRIFVEE----TSFPPPQTTAFYGGFSDG-----GV 276
             D      + + G+ F+D    P  +F++E     S   P T     G ++      G+
Sbjct: 247 FPDPYLLPDLSLAGECFWDTEIAPDLLFLDEETKIQSTLLPNTEVSKQGENETEDFEFGL 306

[Close]

BLAST of Sed0003298 vs. ExPASy Swiss-Prot
Match: O82339 (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana OX=3702 GN=CRF5 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23
Identity = 77/181 (42.54%), Postives = 95/181 (52.49%), Query Frame = 0


Query: 20  PHSAAPRIVRISVADSDATDSDEADAD-----ADELLRLVYEIHFQDSSLQKKRLNES-- 79
           P    P+IV+I V D  ATDS   + +     A  + R V EI F D   + K   ++  
Sbjct: 20  PFDGFPKIVKIIVTDPCATDSSSDEENDNKSVAPRVKRYVDEIRFCDEDDEPKPARKAKK 79

Query: 80  -------------VEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAIAYD 139
                        V+ V K+RGVR+R WG+FAAEIRDP +RTR+WLGTF + EEAAI YD
Sbjct: 80  KSPAAAAENGGDLVKSVVKYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYD 139

Query: 140 EAAIRFRGADAVTSILTPPQRNPVPAEETGGETAV------------------LCSPTSV 163
            AAIR +G +A T+ LTPP   P P  E   ET V                  LCSPTSV
Sbjct: 140 RAAIRIKGHNAQTNFLTPP---PSPTTEVLPETPVIDLETVSGCDSARESQISLCSPTSV 197

[Close]

BLAST of Sed0003298 vs. ExPASy Swiss-Prot
Match: O04682 (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum OX=4081 GN=PTI6 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-23
Identity = 76/182 (41.76%), Postives = 97/182 (53.30%), Query Frame = 0


Query: 21  HSAAPRIVRISVADSDATDS--DEADADADELLRLVYEIHFQDSSLQ-KKRLNESVEP-- 80
           +S   R+VRI + D+DATDS  DE       + R V EI+   S+     R   SV P  
Sbjct: 31  NSELQRVVRIILTDADATDSSDDEGRNTVRRVKRHVTEINLMPSTKSIGDRKRRSVSPDS 90

Query: 81  ----VKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAIAYDEAAIRFRGADAV 140
                KKFRGVR+R WGR+AAEIRDP    RVWLGT+D+ EEAA+ YD+AA++ +G DAV
Sbjct: 91  DVTRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAV 150

Query: 141 TSI-----------LTPPQRNPVPAEETGGETAVLCSPTSVLCGGDWCGAAEMTGDEMEF 183
           T+            +T  +   V       E  V  SPTSVLC  D+        D + F
Sbjct: 151 TNFPVSTTAEVTVTVTETETESVADGGDKSENDVALSPTSVLCDNDFA-----PFDNLGF 207

[Close]

BLAST of Sed0003298 vs. ExPASy Swiss-Prot
Match: Q9SUE3 (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN=CRF4 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-22
Identity = 73/177 (41.24%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 26  RIVRISVADSDATDSDEADADADELL-------RLVYEIHFQDSS-----------LQKK 85
           R+VR+S+ D DATDS    +D +E L       RL+ EI  + SS             +K
Sbjct: 41  RLVRVSMTDRDATDS---SSDEEEFLFPRRRVKRLINEIRVEPSSSSTGDVSASPTKDRK 100

Query: 86  RLN---------ESVEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAIAY 145
           R+N          S +  KK+RGVR+R WG++AAEIRDP  R R+WLGTF + EEAAI Y
Sbjct: 101 RINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVY 160

Query: 146 DEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAV-------------LCSPTSVL 163
           D AAI+ RG DA+T+    P+  PV  +E   E+ +             L SPTSVL
Sbjct: 161 DNAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSISESMDDSQHLSSPTSVL 214

[Close]

BLAST of Sed0003298 vs. ExPASy Swiss-Prot
Match: O82503 (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana OX=3702 GN=CRF1 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-19
Identity = 75/172 (43.60%), Postives = 92/172 (53.49%), Query Frame = 0


Query: 25  PRIVRISVADSDATDS---DEADADADEL-------LRLVYEIHF------QDSSLQKKR 84
           PRI+RISV D  ATDS   +E + D D L        + V E+        ++  ++KKR
Sbjct: 10  PRILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVSDKEKPMKKKR 69

Query: 85  LNESVE-PV------KKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAIAYDEA 144
               V  PV      +KFRGVR+R WG++AAEIRDP  R RVWLGTFD+ EEAAI YD A
Sbjct: 70  KKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNA 129

Query: 145 AIRFRGADAVTSILTPPQRNPVPAEET-----------GGETAVLCSPTSVL 163
           AI+ RG +A  +   PP    V    T           GGE   L SP SVL
Sbjct: 130 AIQLRGPNAELNFPPPPVTENVEEASTEVKGVSDFIIGGGE--CLRSPVSVL 179

[Close]

BLAST of Sed0003298 vs. ExPASy TrEMBL
Match: A0A5A7SSM5 (Ethylene-responsive transcription factor CRF6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00880 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 6.6e-58
Identity = 148/286 (51.75%), Postives = 172/286 (60.14%), Query Frame = 0


Query: 3   SRFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATDSDEADADAD--ELLRLV----YE 62
           SRFKFR+RR VTG  LPP SAAPRI+RI V DSDATD+  +D D D  +LLRLV     E
Sbjct: 6   SRFKFRERRSVTGITLPPDSAAPRILRIFVTDSDATDTSSSDDDDDDAQLLRLVRRHINE 65

Query: 63  IHFQDSSLQKKRLNESVEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAI 122
           IHF DS+  K      ++P KKFRGVRRR WG+FAAEIRDP+ RTR+WLGTFDS EEAAI
Sbjct: 66  IHFHDSTHSKP---NELQPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEEAAI 125

Query: 123 AYDEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAVLCSPTSVLCGGDWCGAAEMTGD 182
            YD+AAIRFRG DA+T+I+ PPQRN +P EE       +C                    
Sbjct: 126 VYDQAAIRFRGPDALTNIIKPPQRN-LPPEE-------ICD------------------S 185

Query: 183 EMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISVLRDGDWYGAVEMIGDEF-----YD 242
            ME  E                 GGG    CSP SVLRD D++ A E++GDE      Y 
Sbjct: 186 SMEIAE----------------DGGGMR--CSPTSVLRD-DYWSATELLGDEMEFMDNYY 241

Query: 243 RPPRIFVEETSFPPPQTTAFYGGFSDGGV--DGNFGSCKWNVEDLF 276
             PRIFVEE S   P+T  F GG  +G V  DGNFGSCKW+V   F
Sbjct: 246 GAPRIFVEERSI--PETAMFCGGLWEGAVDLDGNFGSCKWDVGTCF 241

[Close]

BLAST of Sed0003298 vs. ExPASy TrEMBL
Match: A0A1S3BE80 (ethylene-responsive transcription factor CRF6-like OS=Cucumis melo OX=3656 GN=LOC103488716 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 6.6e-58
Identity = 148/286 (51.75%), Postives = 172/286 (60.14%), Query Frame = 0


Query: 3   SRFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATDSDEADADAD--ELLRLV----YE 62
           SRFKFR+RR VTG  LPP SAAPRI+RI V DSDATD+  +D D D  +LLRLV     E
Sbjct: 6   SRFKFRERRSVTGITLPPDSAAPRILRIFVTDSDATDTSSSDDDDDDAQLLRLVRRHINE 65

Query: 63  IHFQDSSLQKKRLNESVEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAI 122
           IHF DS+  K      ++P KKFRGVRRR WG+FAAEIRDP+ RTR+WLGTFDS EEAAI
Sbjct: 66  IHFHDSTHSKP---NELQPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEEAAI 125

Query: 123 AYDEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAVLCSPTSVLCGGDWCGAAEMTGD 182
            YD+AAIRFRG DA+T+I+ PPQRN +P EE       +C                    
Sbjct: 126 VYDQAAIRFRGPDALTNIIKPPQRN-LPPEE-------ICD------------------S 185

Query: 183 EMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISVLRDGDWYGAVEMIGDEF-----YD 242
            ME  E                 GGG    CSP SVLRD D++ A E++GDE      Y 
Sbjct: 186 SMEIAE----------------DGGGMR--CSPTSVLRD-DYWSATELLGDEMEFMDNYY 241

Query: 243 RPPRIFVEETSFPPPQTTAFYGGFSDGGV--DGNFGSCKWNVEDLF 276
             PRIFVEE S   P+T  F GG  +G V  DGNFGSCKW+V   F
Sbjct: 246 GAPRIFVEERSI--PETAMFCGGLWEGAVDLDGNFGSCKWDVGTCF 241

[Close]

BLAST of Sed0003298 vs. ExPASy TrEMBL
Match: A0A0A0KE47 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042450 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 8.1e-56
Identity = 148/287 (51.57%), Postives = 171/287 (59.58%), Query Frame = 0


Query: 3   SRFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATD---SDEADADADELLRLV----Y 62
           SRFKFR+RR VTG  LPP  AAPRI+RI V DSDATD   SD+ D D   LLRLV     
Sbjct: 6   SRFKFRERRSVTGITLPPDYAAPRILRIFVTDSDATDTSSSDDDDNDDAHLLRLVRRHIN 65

Query: 63  EIHFQDSSLQKKRLNESVEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAA 122
           EI F DS+  K      + P KKFRGVRRR WG+FAAEIRDP+ RTR+WLGTFDS EEAA
Sbjct: 66  EIRFHDSTHSKP---NEIPPTKKFRGVRRRPWGKFAAEIRDPIKRTRIWLGTFDSPEEAA 125

Query: 123 IAYDEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAVLCSPTSVLCGGDWCGAAEMTG 182
           I YD+AAIRFRG DA+T+I+ PP RN VPAEE       +C             + E+T 
Sbjct: 126 IVYDQAAIRFRGPDALTNIVKPPPRN-VPAEE-------ICD-----------SSMEITE 185

Query: 183 DEMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISVLRDGDWYGAVEMIGDEF-----Y 242
           D                       GGG    CSP SVLRD +++ A E++GDE      Y
Sbjct: 186 D-----------------------GGGMR--CSPTSVLRD-EYWRATEVLGDEMELMDNY 242

Query: 243 DRPPRIFVEETSFPPPQTTAFYGGFSDGGV--DGNFGSCKWNVEDLF 276
            R PRIFVEE S   P+T  F GG  +G V  DGNFGSCKW+V   F
Sbjct: 246 YRAPRIFVEERSL--PETAMFCGGLWEGSVDLDGNFGSCKWDVGTCF 242

[Close]

BLAST of Sed0003298 vs. ExPASy TrEMBL
Match: A0A6J1DA05 (ethylene-responsive transcription factor CRF2-like OS=Momordica charantia OX=3673 GN=LOC111018582 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.6e-41
Identity = 126/286 (44.06%), Postives = 152/286 (53.15%), Query Frame = 0


Query: 3   SRFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATD--SDEADADADELLRLVYEIHFQ 62
           SR +FR+RR VTGK L       RIVRISV D+DATD  S E       + R V EI F 
Sbjct: 6   SRVRFRERRSVTGK-LLRQLPGTRIVRISVTDADATDTSSGEESEFVRRVSRRVNEIRFD 65

Query: 63  DSSLQKKRLNESVE--PVK------KFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQE 122
           D S  K+R  +     P K      KFR VRRR+WG++AAEIRDP+ R RVWLGTFDS E
Sbjct: 66  DFSSPKQRTAKQGRDFPAKGESGGMKFRCVRRRQWGKWAAEIRDPIKRARVWLGTFDSPE 125

Query: 123 EAAIAYDEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAVLCSPTSVL-CGGDWCGAA 182
           EAA+ YD AAI+FRG DA+T+I+ PP+RNP P E +        SPTSVL    +W  A 
Sbjct: 126 EAAMVYDRAAIQFRGPDALTNIVKPPERNPPPPENS--SDCGYDSPTSVLRSPPEWSAAE 185

Query: 183 EMTGDEMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISVLRDGDWYGAVEMIGDEFYD 242
           E  GDE EF +   QR +                                          
Sbjct: 186 EFVGDEFEFLD---QRFVE---------------------------------------CH 244

Query: 243 RPPRIFVEETSFPPPQTTAFYGGFSDG--GVDGNFGSCKWNVEDLF 276
           RP  IF+EETS   P+T  + GGF DG   +DGNFGS KW+V+  F
Sbjct: 246 RPAPIFLEETSV--PETAIWGGGFCDGPADLDGNFGSWKWDVDSYF 244

[Close]

BLAST of Sed0003298 vs. ExPASy TrEMBL
Match: A0A061DSM4 (AP2/ERF domain-containing transcription factor, putative OS=Theobroma cacao OX=3641 GN=TCM_005203 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-31
Identity = 119/325 (36.62%), Postives = 155/325 (47.69%), Query Frame = 0


Query: 2   SSRFKFRDRRFVTGKPLPPHS---------AAPRIVRISVADSDATD--SDEADADAD-E 61
           S R K+ +RR VT K + P S          APRIVRISV D DATD  SDE++ + +  
Sbjct: 6   SFRVKYAERRRVTNKLVKPSSKWFSMESSAKAPRIVRISVTDGDATDSSSDESEHERNHR 65

Query: 62  LLRLVYEIHFQDSSL---------QKKRLNESVEPVK---------------KFRGVRRR 121
           + R V EI  +D S          Q K+ N    PV                K+RGVR+R
Sbjct: 66  VKRYVNEIRIEDCSTFNFSKSANKQNKQTNSKCNPVNIRSKKQQQQCLSTGVKYRGVRQR 125

Query: 122 RWGRFAAEIRDPVNRTRVWLGTFDSQEEAAIAYDEAAIRFRGADAVTSILTPPQRNPVPA 181
            WGR+AAEIRDP +RTRVWLGT+D+ EEAA+ YD AAIR +G DA+T+ + PP R   P 
Sbjct: 126 PWGRWAAEIRDPTSRTRVWLGTYDTAEEAALVYDRAAIRIKGPDALTNFVKPPVRPSSPE 185

Query: 182 EE--------TGGETAVLCSPTSVLCGGDWCGAAEMTGDEMEFCE------RPPQ-RNLA 241
            E        +G E+  LCSPTSVL       A   T  + + CE      RP Q R   
Sbjct: 186 IELETISGYDSGQESQSLCSPTSVLRFQSNEEAELQTESKDDSCELTESEWRPVQERPEE 245

Query: 242 PAKEIDAVSGGGTAALCSPISVLRDGDWYGAVEMIGDEFYDRPPRIFVEETSFPPPQTTA 276
           P    D        ALC         D++           D    IF++E   P  +   
Sbjct: 246 PTNLSDGYLLTDPGALC---------DYFDC---------DNLAPIFLDEMRLPEERNLE 305

[Close]

BLAST of Sed0003298 vs. TAIR 10
Match: AT3G61630.1 (cytokinin response factor 6 )

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-31
Identity = 111/315 (35.24%), Postives = 151/315 (47.94%), Query Frame = 0


Query: 4   RFKFRDRRFVTGKPLPPHSAAPRIVRISVADSDATDSDEADADADELL------RLVYEI 63
           R KF + R VT     P + +PR+VRI+V D  ATDS   D D + +       R V EI
Sbjct: 7   RVKFTENRTVTNVAATPSNGSPRLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKEI 66

Query: 64  HF------------------QDSSLQKKRLNESVEPVKKFRGVRRRRWGRFAAEIRDPVN 123
            F                  ++S + +  ++ SV+P KK+RGVR+R WG+FAAEIRDP +
Sbjct: 67  RFCQGESSSSTAARKGKHKEEESVVVEDDVSTSVKP-KKYRGVRQRPWGKFAAEIRDPSS 126

Query: 124 RTRVWLGTFDSQEEAAIAYDEAAIRFRGADAVTSILTPPQRNPVPAEET-------GGET 183
           RTR+WLGTF + EEAAIAYD AAI  +G  A+T+ LTPP   PV   +T           
Sbjct: 127 RTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSACDYGRDSR 186

Query: 184 AVLCSPTSVLCGGDWCGAAEMTGDEMEFCERPPQRNLAPAKEIDAVSGGGTAALCSPISV 243
             L SPTSVL         E T  E+E  E  P+R     KE +  S G          V
Sbjct: 187 QSLHSPTSVL----RFNVNEETEHEIEAIELSPERKSTVIKEEEESSAG---------LV 246

Query: 244 LRDGDWYGAVEMIGDEFYD---RPPRIFVEE----TSFPPPQTTAFYGGFSDG-----GV 276
             D      + + G+ F+D    P  +F++E     S   P T     G ++      G+
Sbjct: 247 FPDPYLLPDLSLAGECFWDTEIAPDLLFLDEETKIQSTLLPNTEVSKQGENETEDFEFGL 306

[Close]

BLAST of Sed0003298 vs. TAIR 10
Match: AT2G46310.1 (cytokinin response factor 5 )

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24
Identity = 77/181 (42.54%), Postives = 95/181 (52.49%), Query Frame = 0


Query: 20  PHSAAPRIVRISVADSDATDSDEADAD-----ADELLRLVYEIHFQDSSLQKKRLNES-- 79
           P    P+IV+I V D  ATDS   + +     A  + R V EI F D   + K   ++  
Sbjct: 20  PFDGFPKIVKIIVTDPCATDSSSDEENDNKSVAPRVKRYVDEIRFCDEDDEPKPARKAKK 79

Query: 80  -------------VEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAIAYD 139
                        V+ V K+RGVR+R WG+FAAEIRDP +RTR+WLGTF + EEAAI YD
Sbjct: 80  KSPAAAAENGGDLVKSVVKYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYD 139

Query: 140 EAAIRFRGADAVTSILTPPQRNPVPAEETGGETAV------------------LCSPTSV 163
            AAIR +G +A T+ LTPP   P P  E   ET V                  LCSPTSV
Sbjct: 140 RAAIRIKGHNAQTNFLTPP---PSPTTEVLPETPVIDLETVSGCDSARESQISLCSPTSV 197

[Close]

BLAST of Sed0003298 vs. TAIR 10
Match: AT4G27950.1 (cytokinin response factor 4 )

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-23
Identity = 73/177 (41.24%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 26  RIVRISVADSDATDSDEADADADELL-------RLVYEIHFQDSS-----------LQKK 85
           R+VR+S+ D DATDS    +D +E L       RL+ EI  + SS             +K
Sbjct: 41  RLVRVSMTDRDATDS---SSDEEEFLFPRRRVKRLINEIRVEPSSSSTGDVSASPTKDRK 100

Query: 86  RLN---------ESVEPVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAIAY 145
           R+N          S +  KK+RGVR+R WG++AAEIRDP  R R+WLGTF + EEAAI Y
Sbjct: 101 RINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVY 160

Query: 146 DEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAV-------------LCSPTSVL 163
           D AAI+ RG DA+T+    P+  PV  +E   E+ +             L SPTSVL
Sbjct: 161 DNAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSISESMDDSQHLSSPTSVL 214

[Close]

BLAST of Sed0003298 vs. TAIR 10
Match: AT4G11140.1 (cytokinin response factor 1 )

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20
Identity = 75/172 (43.60%), Postives = 92/172 (53.49%), Query Frame = 0


Query: 25  PRIVRISVADSDATDS---DEADADADEL-------LRLVYEIHF------QDSSLQKKR 84
           PRI+RISV D  ATDS   +E + D D L        + V E+        ++  ++KKR
Sbjct: 10  PRILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVSDKEKPMKKKR 69

Query: 85  LNESVE-PV------KKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAIAYDEA 144
               V  PV      +KFRGVR+R WG++AAEIRDP  R RVWLGTFD+ EEAAI YD A
Sbjct: 70  KKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNA 129

Query: 145 AIRFRGADAVTSILTPPQRNPVPAEET-----------GGETAVLCSPTSVL 163
           AI+ RG +A  +   PP    V    T           GGE   L SP SVL
Sbjct: 130 AIQLRGPNAELNFPPPPVTENVEEASTEVKGVSDFIIGGGE--CLRSPVSVL 179

[Close]

BLAST of Sed0003298 vs. TAIR 10
Match: AT5G53290.1 (cytokinin response factor 3 )

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-20
Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 0


Query: 60  QDSSLQKKRLNESVE---PVKKFRGVRRRRWGRFAAEIRDPVNRTRVWLGTFDSQEEAAI 119
           Q  +  ++R N  V     +KKFRGVR+R WG++AAEIRDP  R R+WLGTF++ EEAA+
Sbjct: 103 QSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAV 162

Query: 120 AYDEAAIRFRGADAVTSILTPPQRNPVPAEETGGETAVLCSPTSVLCGGDWCGAAEMTGD 179
            YD AAIR RG DA+T+   PPQ      EE   E  +   P  +        ++E T +
Sbjct: 163 VYDNAAIRLRGPDALTNFSIPPQEE---EEEEEPEPVIEEKPVIMTTPTPTTSSSESTEE 222

Query: 180 EMEFCERP 185
           +++    P
Sbjct: 223 DLQHLSSP 227

The following BLAST results are available for this feature:

BLAST of Sed0003298 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886548.1	5.0e-60	52.78	ethylene-responsive transcription factor CRF6-like [Benincasa hispida]	[more]
XP_008445792.1	1.4e-57	51.75	PREDICTED: ethylene-responsive transcription factor CRF6-like [Cucumis melo] >KA...	[more]
XP_011656563.1	1.7e-55	51.57	ethylene-responsive transcription factor CRF6 [Cucumis sativus] >KGN46011.1 hypo...	[more]
XP_022150419.1	2.0e-40	44.06	ethylene-responsive transcription factor CRF2-like [Momordica charantia]	[more]
EOX95789.1	2.2e-31	36.62	AP2/ERF domain-containing transcription factor, putative [Theobroma cacao]	[more]

BLAST of Sed0003298 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M374	2.5e-30	35.24	Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82339	1.7e-23	42.54	Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O04682	3.0e-23	41.76	Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicu...	[more]
Q9SUE3	2.5e-22	41.24	Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82503	1.5e-19	43.60	Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Sed0003298 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSM5	6.6e-58	51.75	Ethylene-responsive transcription factor CRF6-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BE80	6.6e-58	51.75	ethylene-responsive transcription factor CRF6-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KE47	8.1e-56	51.57	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042450 PE=...	[more]
A0A6J1DA05	9.6e-41	44.06	ethylene-responsive transcription factor CRF2-like OS=Momordica charantia OX=367...	[more]
A0A061DSM4	1.1e-31	36.62	AP2/ERF domain-containing transcription factor, putative OS=Theobroma cacao OX=3...	[more]

BLAST of Sed0003298 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61630.1	1.8e-31	35.24	cytokinin response factor 6	[more]
AT2G46310.1	1.2e-24	42.54	cytokinin response factor 5	[more]
AT4G27950.1	1.8e-23	41.24	cytokinin response factor 4	[more]
AT4G11140.1	1.1e-20	43.60	cytokinin response factor 1	[more]
AT5G53290.1	1.9e-20	41.41	cytokinin response factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 101..117 score: 64.92 coord: 79..90 score: 59.09
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 78..143 e-value: 2.0E-31 score: 120.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 78..127 e-value: 1.3E-13 score: 51.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 78..138 score: 21.904358
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 90..132 e-value: 1.22936E-19 score: 78.4675
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 77..134 e-value: 3.0E-23 score: 83.7
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 4..163
None	No IPR available	PANTHER	PTHR31194:SF108	PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI6-LIKE	coord: 4..163
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 78..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003298.1	Sed0003298.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity