Sed0003115 (gene) Chayote v1

Overview
NameSed0003115
Typegene
OrganismSechium edule (Chayote v1)
Descriptionhistone deacetylase complex subunit SAP18-like
LocationLG02: 51622766 .. 51625864 (+)
RNA-Seq ExpressionSed0003115
SyntenySed0003115
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGAATTTCAAGGCCCAAGGATGGGCCTCGCCTATAAATAGGCGAAGCTTACGGAAGGTGAAGAAACATAGAGAGAAATGGCGGGAGAACCAGAAGCGCCAAGGACGGCTTATGGCGCTCCTCCAAGAGCAGCACCTCAGGCTCATCACCGTCCCCGCTTGGACCCCGTCGATCGCGAAAAGGTTTCTCTCTCTCTCTCTCTTTCATTCTCATCTCCATTTTAGGGTTTCTGTCCGTTCATCGTTATTCAGTTTTGGTGTTCTTTAGTAGAATCCATCTTCGTCTTCAATCGATTTCTTGTTTCTTTGCTCTAAAACTTCTTTCACTGTTCTGATTCTTGTTATTTTAATCGTCGAGTATTTCCTTATTTTTCGTTACTTCGTTGTGTGTAGAGCTGGCCGTGTACCGTAGATAGCAACTTTTGATGTTCTACTGCTTCTGAGTGATTTTGTTTCTGTTCTTGCAGACTTGTCCTTTGCTGCTTCGCGTTTTTACCAAGGTATGTTGTGTTTTGATGCTGGCTTCTTGATTTTATGAATTTTGTTTCATTTCTCTGCAATGAGTGTGTTGTACTCCATCAATGCCCTGCGATTAGCAGTCAGGGGTCTCGTTTGCGTGAATACAGATGTATTCGCTTAGCACATCCTGCGTGCAAATGCATCTTGCATTGTAGCGCATTGTTGCAATGCGTTCTGCGTGTGTTTGCGCATCATCATTCTGTTTTTGCAGCGCGTTTACGCATCCACATTCTGTTTAATGCTTACGCATTCAGTAATAGAGTTTAATGAGAGGATCTATATAAACTCGAATTAAATACTAGCCGCAGTATGACATAATCTATGTATCTGTAAATTTCCATCTCTCCCAATATAATTGCTCCCCTCTTTTGCCCGTGGATTAGTCAATGCAACGTTGGTGAACCACGAAAATTTTTGTGTTGTTTTCTTCTCTCACATTTACCATTATCTGTTTTTCATATCTTCATTTTACGATTGTTGATTGCCATTTTCATAAAAGAGTGAGTTTAATCCAATCGGTATATGAATATGGATGACATGAAATGTGTTGGATGTCAAATTCGTGTGAAATGTTCTCTTGTTTATGTCAGTATGGTGATACATAGGATTTAGGATTCGGATGTGAGAATAGTTGAAGAGATTAGTAATTTCCGTGGTGTTTATTTTCTTCTACGATTAGTTTATGAGGTTATATTGCTTACTGATGATCTAGGTTCCTGGTTATAAGCAATGTCCCTTATTTCAATTCTTGAAGCTTCATTATGAAATTGAAATTTGCTGTAATTGCAAATTTTCTGCAGATCGGGAGACACCATTTCAGCCAAGACTTTTCTGTGAGGGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAACTGACTGATCTGGTTGTATTTCCCATTCATTTTCAACTTTTTCTTCCATTTCAATGATCTGTATCTTTTAGAGTTTATATATCCATGCTGTTTCGTAGAAACTATTTCCTTTCTGCTGTCCTTGAACTTATGTTGTGTGTATGTTTGTATGTCCCATTTTTCTGGGGGGTTGCAGGTTAAAGATGTAGTTCCGGAAGCCACAAGGAGAAATGCTAAACTATCTTTCGCATTGGTGTATCCCGATAGATATGGCCGGTTTGTAGTGAGAGAGGTATCTCTCTGCTCTCATTTCTCCTACGCTGACGTGCATGGACGGACACTAACATTTATGTTTTTAGGATTGTAAATTATGATTTCTGCCCTTTTACCTTAGTTGAATGTGCCAATTTTAGTATTAATTTTTCAGAAATTGAACATGTAAGTTGAATAAATGTTAAGATCATTAGTTATTATAAAAACCAGGCCAGGAATTACCCACCAAAACCCATCAATTAATTGGCCAAAATTTCATCTCAAGAATCATGGATTACTTAATCTCTTAGTTGCTGCCACTTATGTATGAGGGATGCGAATTCTCAATTACATGTATTCAGCCACTATCCTTTTGGTACAAAATTTTGGGATTATATTCACTCTTTATTTTCAAGAACAAGTCTCAATTTATAGAAAAGTTTATAGATTCCACTACTTATTTATTTTTGTTTTGGAGTCATCATCTCCCCTTTTTTTAATTGATTTCTTGATAGTCGATCAAATCTTTTTATTGCGATCTTGTTGGGTAATTAAAATCCAGGGTTGAAGTTGGCTCATTCAACTAAATCCGGAACAAGAAATAAAATATTTTCGTTGACTACTGGTGGCCTGTATTCTGTGTCTAAGACTTGTTTGATTGGGAGACCATACTTTCAAACTGAACCTATCCGTACTCTTAAGTCTTAATACAGTTTGAAGTGATTTTTTTTGTTAACTGCACAAATTTCAGTTTAAGGGATTAAGTTCGCAATTTTTTCACTATATATGACCCAATTTTTGTGCACTGGACAACCAATATTGAGTTTGATTGATCTATTTTTTTAATGTAAATTTATAAAGGTACGAGGAAAGTGAACCAACATGTGAACTTCCAAGTAATCCAGGTTCTGTTTCTTTATGTGAAGGTAGGGAAGACATTCTCGTTCGGAACTGGACGGTTAGACGATAGCTTAGCTTTGGCAGACATCGGTTTTCAAGTAAAGCAAACACGGCTTTCGTTTTTTCCTTAAATTAGTTCTGTATTTCCTCTCATACATGCTGCACTTTTCCGATGCAGATTGGAGATTACTTGGATGTGGCAATTATATAGGGCATTTTCGTGCCTCTATGTCGTAACATATGCCTTGTCGACCGGAAAGAGGTTTTGCAATCCGTTTTCCTAGCCAAGAACCAAACGAAGGTGGATATTTAGCTTTAGTCTTGTTATGTATATACCATAATGTGTGTGATAATCCTTTACATGTTTGTCCTGTTCTCTTGAGTTTTTTTTAGGTAGAATCATGATAGTCATCGTTTTGTTCTTTTGCGTTGCCTTCTTGTTTTATACCGGCATCAGTCTTTCTTTTTGACATGTCTTAGGCATTGGGATAGCTTTTAATGATGGAATGGAACTATTTTAGGCCATATAATGATCTTATTTTTAGTTGAGC

mRNA sequence

CCGAATTTCAAGGCCCAAGGATGGGCCTCGCCTATAAATAGGCGAAGCTTACGGAAGGTGAAGAAACATAGAGAGAAATGGCGGGAGAACCAGAAGCGCCAAGGACGGCTTATGGCGCTCCTCCAAGAGCAGCACCTCAGGCTCATCACCGTCCCCGCTTGGACCCCGTCGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGCGTTTTTACCAAGATCGGGAGACACCATTTCAGCCAAGACTTTTCTGTGAGGGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAACTGACTGATCTGGTTAAAGATGTAGTTCCGGAAGCCACAAGGAGAAATGCTAAACTATCTTTCGCATTGGTGTATCCCGATAGATATGGCCGGTTTGTAGTGAGAGAGGTAGGGAAGACATTCTCGTTCGGAACTGGACGGTTAGACGATAGCTTAGCTTTGGCAGACATCGGTTTTCAAATTGGAGATTACTTGGATGTGGCAATTATATAGGGCATTTTCGTGCCTCTATGTCGTAACATATGCCTTGTCGACCGGAAAGAGGTTTTGCAATCCGTTTTCCTAGCCAAGAACCAAACGAAGGTGGATATTTAGCTTTAGTCTTGTTATGTATATACCATAATGTGTGTGATAATCCTTTACATGTTTGTCCTGTTCTCTTGAGTTTTTTTTAGGTAGAATCATGATAGTCATCGTTTTGTTCTTTTGCGTTGCCTTCTTGTTTTATACCGGCATCAGTCTTTCTTTTTGACATGTCTTAGGCATTGGGATAGCTTTTAATGATGGAATGGAACTATTTTAGGCCATATAATGATCTTATTTTTAGTTGAGC

Coding sequence (CDS)

ATGGCGGGAGAACCAGAAGCGCCAAGGACGGCTTATGGCGCTCCTCCAAGAGCAGCACCTCAGGCTCATCACCGTCCCCGCTTGGACCCCGTCGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGCGTTTTTACCAAGATCGGGAGACACCATTTCAGCCAAGACTTTTCTGTGAGGGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAACTGACTGATCTGGTTAAAGATGTAGTTCCGGAAGCCACAAGGAGAAATGCTAAACTATCTTTCGCATTGGTGTATCCCGATAGATATGGCCGGTTTGTAGTGAGAGAGGTAGGGAAGACATTCTCGTTCGGAACTGGACGGTTAGACGATAGCTTAGCTTTGGCAGACATCGGTTTTCAAATTGGAGATTACTTGGATGTGGCAATTATATAG

Protein sequence

MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
Homology
[Close]
BLAST of Sed0003115 vs. NCBI nr
Match: XP_022943948.1 (histone deacetylase complex subunit SAP18-like [Cucurbita moschata] >KAG6597180.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028645.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.4 bits (664), Expect = 9.6e-66
Identity = 129/149 (86.58%), Postives = 138/149 (92.62%), Query Frame = 0 

Query: 1   MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRG 60
           MAGE EAPR AYGAPPR AP A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRG
Sbjct: 24  MAGEAEAPRRAYGAPPR-APHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 83

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTF 120
           KEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSFALVYPDR+GRFVVREVGKTF
Sbjct: 84  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTF 143

Query: 121 SFGTGRLDDSLALADIGFQIGDYLDVAII 150
           SFG GR DD+LALA++GFQIGDYLDVAII
Sbjct: 144 SFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]
BLAST of Sed0003115 vs. NCBI nr
Match: XP_023538738.1 (histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.4 bits (664), Expect = 9.6e-66
Identity = 129/149 (86.58%), Postives = 138/149 (92.62%), Query Frame = 0 

Query: 1   MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRG 60
           MAGE EAPR AYGAPPR AP A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRG
Sbjct: 1   MAGEAEAPRRAYGAPPR-APHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 60

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTF 120
           KEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSFALVYPDR+GRFVVREVGKTF
Sbjct: 61  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTF 120

Query: 121 SFGTGRLDDSLALADIGFQIGDYLDVAII 150
           SFG GR DD+LALA++GFQIGDYLDVAII
Sbjct: 121 SFGNGRSDDNLALAELGFQIGDYLDVAII 148

[Close]
BLAST of Sed0003115 vs. NCBI nr
Match: XP_022974173.1 (histone deacetylase complex subunit SAP18-like [Cucurbita maxima])

HSP 1 Score: 260.4 bits (664), Expect = 9.6e-66
Identity = 129/149 (86.58%), Postives = 138/149 (92.62%), Query Frame = 0 

Query: 1   MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRG 60
           MAGE EAPR AYGAPPR AP A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRG
Sbjct: 24  MAGEAEAPRRAYGAPPR-APHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 83

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTF 120
           KEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSFALVYPDR+GRFVVREVGKTF
Sbjct: 84  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTF 143

Query: 121 SFGTGRLDDSLALADIGFQIGDYLDVAII 150
           SFG GR DD+LALA++GFQIGDYLDVAII
Sbjct: 144 SFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]
BLAST of Sed0003115 vs. NCBI nr
Match: XP_022147400.1 (histone deacetylase complex subunit SAP18 [Momordica charantia])

HSP 1 Score: 259.2 bits (661), Expect = 2.1e-65
Identity = 127/149 (85.23%), Postives = 137/149 (91.95%), Query Frame = 0 

Query: 1   MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRG 60
           MAGE EAPR AYGAPPR  P    RPRL+PVDREKTCPLLLRVFTK+G HHF++DF+VRG
Sbjct: 1   MAGEAEAPRRAYGAPPR-GPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRG 60

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTF 120
           KEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSFALVYPDR+GRFVVREVGKTF
Sbjct: 61  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTF 120

Query: 121 SFGTGRLDDSLALADIGFQIGDYLDVAII 150
           SFG GRLDDSLALA++GFQIGDYLDVAI+
Sbjct: 121 SFGNGRLDDSLALAELGFQIGDYLDVAIL 148

[Close]
BLAST of Sed0003115 vs. NCBI nr
Match: XP_038879427.1 (histone deacetylase complex subunit SAP18 [Benincasa hispida])

HSP 1 Score: 256.5 bits (654), Expect = 1.4e-64
Identity = 128/149 (85.91%), Postives = 138/149 (92.62%), Query Frame = 0 

Query: 1   MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRG 60
           MAGE EAPR AYGA PRA+  A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRG
Sbjct: 1   MAGEAEAPRRAYGAFPRAS-HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 60

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTF 120
           KEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSFALVYPDR+GRFV+REVGKTF
Sbjct: 61  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTF 120

Query: 121 SFGTGRLDDSLALADIGFQIGDYLDVAII 150
           SFG GRLDDSLALA++GFQIGDYLDVAII
Sbjct: 121 SFGNGRLDDSLALAELGFQIGDYLDVAII 148

[Close]
BLAST of Sed0003115 vs. ExPASy Swiss-Prot
Match: O64644 (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2g45640 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-43
Identity = 88/135 (65.19%), Postives = 107/135 (79.26%), Query Frame = 0 

Query: 15  PPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKD 74
           PPR   Q   RP+ +PVDREKTCPLLLRVFTK G HH S+D++VRGKEP+DEVQIYTWKD
Sbjct: 17  PPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVRGKEPKDEVQIYTWKD 76

Query: 75  ATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTFSFGTGRL-DDSLAL 134
           A+LRELTDLVK+V   A RRNA+LSFA VYP+  G + VREVG+T ++   +  DDS  L
Sbjct: 77  ASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVGETMAYPNRKQPDDSKTL 136

Query: 135 ADIGFQIGDYLDVAI 149
           +++ F+IGDYLDVAI
Sbjct: 137 SELPFEIGDYLDVAI 151

[Close]
BLAST of Sed0003115 vs. ExPASy Swiss-Prot
Match: Q3T022 (Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-28
Identity = 68/121 (56.20%), Postives = 84/121 (69.42%), Query Frame = 0 

Query: 30  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVV 89
           P+DREKTCPLLLRVF T  GRHH   +FS RG  P  E+QIYTW DATL+ELT LVK+V 
Sbjct: 19  PIDREKTCPLLLRVFTTNNGRHHRMDEFS-RGNVPSSELQIYTWMDATLKELTSLVKEVY 78

Query: 90  PEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVA 149
           PEA ++    +FA+V+ D +   + V+E+G T S G    DDS+ L    FQIGDYLD+A
Sbjct: 79  PEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]
BLAST of Sed0003115 vs. ExPASy Swiss-Prot
Match: O00422 (Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-28
Identity = 68/121 (56.20%), Postives = 84/121 (69.42%), Query Frame = 0 

Query: 30  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVV 89
           P+DREKTCPLLLRVF T  GRHH   +FS RG  P  E+QIYTW DATL+ELT LVK+V 
Sbjct: 19  PIDREKTCPLLLRVFTTNNGRHHRMDEFS-RGNVPSSELQIYTWMDATLKELTSLVKEVY 78

Query: 90  PEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVA 149
           PEA ++    +FA+V+ D +   + V+E+G T S G    DDS+ L    FQIGDYLD+A
Sbjct: 79  PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]
BLAST of Sed0003115 vs. ExPASy Swiss-Prot
Match: Q5RDT5 (Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-28
Identity = 68/121 (56.20%), Postives = 84/121 (69.42%), Query Frame = 0 

Query: 30  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVV 89
           P+DREKTCPLLLRVF T  GRHH   +FS RG  P  E+QIYTW DATL+ELT LVK+V 
Sbjct: 19  PIDREKTCPLLLRVFTTNNGRHHRMDEFS-RGNVPSSELQIYTWMDATLKELTSLVKEVY 78

Query: 90  PEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVA 149
           PEA ++    +FA+V+ D +   + V+E+G T S G    DDS+ L    FQIGDYLD+A
Sbjct: 79  PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]
BLAST of Sed0003115 vs. ExPASy Swiss-Prot
Match: O55128 (Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 68/121 (56.20%), Postives = 84/121 (69.42%), Query Frame = 0 

Query: 30  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVV 89
           P+DREKTCPLLLRVF T  GRHH   +FS RG  P  E+QIYTW DATL+ELT LVK+V 
Sbjct: 19  PIDREKTCPLLLRVFTTNNGRHHRMDEFS-RGNVPSSELQIYTWMDATLKELTSLVKEVY 78

Query: 90  PEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVA 149
           PEA ++    +FA+V+ D +   + V+E+G T S G    DDS+ L    FQIGDYLD+A
Sbjct: 79  PEARKKGTHFNFAIVFMDLKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]
BLAST of Sed0003115 vs. ExPASy TrEMBL
Match: A0A6J1IFF7 (histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LOC111472759 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66
Identity = 129/149 (86.58%), Postives = 138/149 (92.62%), Query Frame = 0 

Query: 1   MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRG 60
           MAGE EAPR AYGAPPR AP A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRG
Sbjct: 24  MAGEAEAPRRAYGAPPR-APHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 83

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTF 120
           KEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSFALVYPDR+GRFVVREVGKTF
Sbjct: 84  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTF 143

Query: 121 SFGTGRLDDSLALADIGFQIGDYLDVAII 150
           SFG GR DD+LALA++GFQIGDYLDVAII
Sbjct: 144 SFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]
BLAST of Sed0003115 vs. ExPASy TrEMBL
Match: A0A6J1FXI8 (histone deacetylase complex subunit SAP18-like OS=Cucurbita moschata OX=3662 GN=LOC111448519 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66
Identity = 129/149 (86.58%), Postives = 138/149 (92.62%), Query Frame = 0 

Query: 1   MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRG 60
           MAGE EAPR AYGAPPR AP A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRG
Sbjct: 24  MAGEAEAPRRAYGAPPR-APHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 83

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTF 120
           KEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSFALVYPDR+GRFVVREVGKTF
Sbjct: 84  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTF 143

Query: 121 SFGTGRLDDSLALADIGFQIGDYLDVAII 150
           SFG GR DD+LALA++GFQIGDYLDVAII
Sbjct: 144 SFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]
BLAST of Sed0003115 vs. ExPASy TrEMBL
Match: A0A6J1D024 (histone deacetylase complex subunit SAP18 OS=Momordica charantia OX=3673 GN=LOC111016339 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.0e-65
Identity = 127/149 (85.23%), Postives = 137/149 (91.95%), Query Frame = 0 

Query: 1   MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRG 60
           MAGE EAPR AYGAPPR  P    RPRL+PVDREKTCPLLLRVFTK+G HHF++DF+VRG
Sbjct: 1   MAGEAEAPRRAYGAPPR-GPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRG 60

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTF 120
           KEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSFALVYPDR+GRFVVREVGKTF
Sbjct: 61  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTF 120

Query: 121 SFGTGRLDDSLALADIGFQIGDYLDVAII 150
           SFG GRLDDSLALA++GFQIGDYLDVAI+
Sbjct: 121 SFGNGRLDDSLALAELGFQIGDYLDVAIL 148

[Close]
BLAST of Sed0003115 vs. ExPASy TrEMBL
Match: A0A5D3D2K7 (Histone deacetylase complex subunit SAP18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004240 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 127/149 (85.23%), Postives = 136/149 (91.28%), Query Frame = 0 

Query: 1   MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRG 60
           MAGE EAPR AYGAPPRA   A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRG
Sbjct: 1   MAGEAEAPRRAYGAPPRAT-HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 60

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTF 120
           KEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSFALVYPDR+GRFV+REVGKTF
Sbjct: 61  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTF 120

Query: 121 SFGTGRLDDSLALADIGFQIGDYLDVAII 150
           SFG  RLDDSLAL ++GFQIGDYLDVAII
Sbjct: 121 SFGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]
BLAST of Sed0003115 vs. ExPASy TrEMBL
Match: A0A1S3AVL4 (histone deacetylase complex subunit SAP18 OS=Cucumis melo OX=3656 GN=LOC103483322 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 127/149 (85.23%), Postives = 136/149 (91.28%), Query Frame = 0 

Query: 1   MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRG 60
           MAGE EAPR AYGAPPRA   A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRG
Sbjct: 1   MAGEAEAPRRAYGAPPRAT-HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRG 60

Query: 61  KEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTF 120
           KEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSFALVYPDR+GRFV+REVGKTF
Sbjct: 61  KEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTF 120

Query: 121 SFGTGRLDDSLALADIGFQIGDYLDVAII 150
           SFG  RLDDSLAL ++GFQIGDYLDVAII
Sbjct: 121 SFGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]
BLAST of Sed0003115 vs. TAIR 10
Match: AT2G45640.1 (SIN3 associated polypeptide P18 )

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44
Identity = 88/135 (65.19%), Postives = 107/135 (79.26%), Query Frame = 0 

Query: 15  PPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKD 74
           PPR   Q   RP+ +PVDREKTCPLLLRVFTK G HH S+D++VRGKEP+DEVQIYTWKD
Sbjct: 17  PPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVRGKEPKDEVQIYTWKD 76

Query: 75  ATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTFSFGTGRL-DDSLAL 134
           A+LRELTDLVK+V   A RRNA+LSFA VYP+  G + VREVG+T ++   +  DDS  L
Sbjct: 77  ASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVGETMAYPNRKQPDDSKTL 136

Query: 135 ADIGFQIGDYLDVAI 149
           +++ F+IGDYLDVAI
Sbjct: 137 SELPFEIGDYLDVAI 151

[Close]
BLAST of Sed0003115 vs. TAIR 10
Match: AT2G45640.2 (SIN3 associated polypeptide P18 )

HSP 1 Score: 167.5 bits (423), Expect = 7.9e-42
Identity = 85/135 (62.96%), Postives = 104/135 (77.04%), Query Frame = 0 

Query: 15  PPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKD 74
           PPR   Q   RP+ +PVDREKTCPLLLRVFTK G HH S+D++VRGKEP+DEVQIYTWKD
Sbjct: 17  PPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVRGKEPKDEVQIYTWKD 76

Query: 75  ATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVREVGKTFSFGTGRL-DDSLAL 134
           A+LRELTDLVK+V   A RRNA+LSFA VYP+  G +    VG+T ++   +  DDS  L
Sbjct: 77  ASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGY---NVGETMAYPNRKQPDDSKTL 136

Query: 135 ADIGFQIGDYLDVAI 149
           +++ F+IGDYLDVAI
Sbjct: 137 SELPFEIGDYLDVAI 148

The following BLAST results are available for this feature:
BLAST of Sed0003115 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022943948.19.6e-6686.58histone deacetylase complex subunit SAP18-like [Cucurbita moschata] >KAG6597180.... [more]
XP_023538738.19.6e-6686.58histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo][more]
XP_022974173.19.6e-6686.58histone deacetylase complex subunit SAP18-like [Cucurbita maxima][more]
XP_022147400.12.1e-6585.23histone deacetylase complex subunit SAP18 [Momordica charantia][more]
XP_038879427.11.4e-6485.91histone deacetylase complex subunit SAP18 [Benincasa hispida][more]
BLAST of Sed0003115 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O646441.4e-4365.19Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2... [more]
Q3T0221.7e-2856.20Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV... [more]
O004221.7e-2856.20Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 ... [more]
Q5RDT51.7e-2856.20Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 ... [more]
O551282.2e-2856.20Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1... [more]
BLAST of Sed0003115 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IFF74.6e-6686.58histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FXI84.6e-6686.58histone deacetylase complex subunit SAP18-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1D0241.0e-6585.23histone deacetylase complex subunit SAP18 OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A5D3D2K71.1e-6485.23Histone deacetylase complex subunit SAP18 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3AVL41.1e-6485.23histone deacetylase complex subunit SAP18 OS=Cucumis melo OX=3656 GN=LOC10348332... [more]
BLAST of Sed0003115 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45640.11.0e-4465.19SIN3 associated polypeptide P18 [more]
AT2G45640.27.9e-4262.96SIN3 associated polypeptide P18 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042534Sin3 associated polypeptide p18 superfamilyGENE3D3.10.20.550ASAP complex, SAP18 subunitcoord: 16..121
e-value: 3.3E-33
score: 116.3
IPR010516Sin3 associated polypeptide p18PFAMPF06487SAP18coord: 30..115
e-value: 3.2E-30
score: 105.2
IPR010516Sin3 associated polypeptide p18PANTHERPTHR13082SAP18coord: 13..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR13082:SF4DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATEDcoord: 13..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0003115.1Sed0003115.1mRNA
Sed0003115.2Sed0003115.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045892 negative regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003714 transcription corepressor activity