Sed0003061 (gene) Chayote v1

Overview


Name	Sed0003061
Type	gene
Organism	Sechium edule (Chayote v1)
Description	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
Location	LG01: 888695 .. 891887 (-)
RNA-Seq Expression	Sed0003061
Synteny	Sed0003061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCTCGTCATCAGTAAGCGCAATTCTACAAATCCCTAAAACCCTCACAGAAACCCTAAAAAGATCGTTGCTATTCGGATGTCGGACAGAGAAGATACCGATTCCGACGCCCCGGAGGAGTTCACCGCCGATCAGGTTCTTTCCTTTCAACTTTCTGTTTGAAAGAATTCTACGGCTATGTTTAAAGGAAGTATTGATTTATACAAGAACTTTTATCTGTTGCAGGGAATACAGCAAGATCAGGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAGGTATGTTTTCAATCCTTCGTGCTTCACCAATGATTCAGTCTTTGTAAATTATTGCCATGGATGTTTCTTCATCATACGTAGGAGTTAATGGTTTAATGTGTAGTTGGCTTAGTGTTTAGTTTTATCACTGCGTTTGGAGCTGTTTTTTCTATTCAATCACGTCGGTGTTTTTGCTTTTATTAGTTGATTTAAGTTTAGCTGACATTATAGTCTCAGGCATCACTTAAGTTGTTTATTTGGATTTCATATGCTATTTTTTATGGATTTCTTTTGTATGTATATAAAATGGAGTTGGTATTTGAAGCTTCTAGAAGCAGGAGATACATAAACCGCCAAAATTTTTATTCGAAATTCCTTGGTGATGACTAGCCAAATTTAGTGAAGAAAATTTTCCTAGTCTTCATATTGAAGGAGTGCCCTTCAATTGAAAGTTTGGATTCTGGGCCTCCATGGGAAAACCCATTAAGCCTTGCATTCTGTTCTATATTTCCCCTAAAATAGACAGAGGAAGGAAATTGATTCAATCTCTTATCCTGTAGTCTGCTCATATAGCACTGCCCTGGCCTCGTGATAACATATGGGATTCTTTTTATTCACTTTTCAGCACTAGCAGTGTTATTATTGTTCCCATGCCACCATGGATCACATAACCAGTGGAACAATGGGGTCTTCTTCTGACACCTTCTATTCCAACCCGACTTTTGAGGGAAGGAGGATAGCATTCTCAGTTGTCCACCTCTTGAAAAAACCGACTCATGAAGTTTTTCCTGTCTGAACACCAAATTCTGGCATGTTGTCCATATTAGTAAAGAAGACATGATTTTCATTTACCTATCGGATCAGGGACTCATGATTTTCAACCCTTTTGAAACTTCCCCTCATTAGATTGAAGTTATGTCCCAAGTTCCGATAATTAGTCTCTGAATTTGTAGCCATTAATGCTGAGTTTCTTTATGTTTGTGAGGATATATACTTAAGGTAAGATATAATGAAGAGTTTCGGGGCTGTGGATCCTTCTCGAAGTGAACAGACATATCTACCATTGCCCACCTTGTTAACTGAATTCTCTCAATACATTATATGACATTGTACTTTTGGAGAATAGGAACCTCAAATTTTTTGTGCCGCTGTACCATATGAGCATATACCAAAAATCTGAATCTTGATCTCTAATATTTCCAACAAATAAGGCCAATCCACCAAGTTAGGTTTTCTCATAATCATAACTGAGCATGAATGTCAACTAGTGTTGGACCGATATTGACTTTGTACAGCTAGGGTTCGTGTTGTTGTACCAGTATGTGTGTCCAATAAGTGTTGGAGTGTCCAAGTGTTTAACACGTATTGGAGACGAAGATGCTATCTCTAGCCAAACTAAAGTGTCTATGCTTCTTTTTTAAATACAATTTTTTTGCTGTTGTAATCCGGTTCTCAGTTTATGTTCTATTCCTGGTTCTTTTGATTTGGTCCTAAGTAATTTAGGCTCCGTTTGATAACCATTTGGTTTCTTGTTTTTTTTTGAAATTTAAGATAACTTTTACTCAAATTTCCTACCATATATCCATATTTTCTTAAGAAAGTAGGGGAATGTCAACCAAATTTCAAAAACAAAAATAAATTTTTGGAAGCTACTTTTTTTTGTTTCCAACTTTTGGTTTTGGTTTCTTAAAATATAGGTAATACTTAGATATCCAAGTAAGAAAGAAGTTGTGGTAAGATAGTTGTCGTAGATTTAAATTCAAAAATAAAAAACTAAAAACAAAATGGTTATCAAATGGGGCTTTATCTAATGAGGTGCCCTCTCTTAAGTCTCTTCTCTGTTTTCCATCTGTTGAATGAATAAGAATCAAATTGTTAGGTCACAACAATACTCGGAATCTGATTCATGTTTTTTAATTAAGAAAACAGATGACGAAGATGGAAAAAATCAAATATATAGCCTAAAAGCCCACTGCATAATGGACTATTTGCCTGCATGCCTGTTCAATATGTGACCTAAAGGATTTTGTCCATTTTATACATGCCTGTTAGTTGTTAAGTTCAACAATTTTTGGGGTGGGGGTTTTGAACTTTTAACCTTTACTAGGTTTTGGAGTTATGCTCCTCTTTTTGATGTATGCCTATTCATTATGTTTTCATGACAGAAGATGATATATAGCTTTGTTTCTGTAGGGTTGTTCGTGAAGGAAAAGAGCGTCGTAGACTGTGGGCTGAAAAGAAAACACCTCGCTCATCTAAAAAGGGCGAAATTGTCGAAGACAGAGAAGAAACCCCTACGCACAATGATCAAGTCAGCAAGTTGGGAATGCTTCCCAGTAATCTTGTCCAACTGCTTGCAGACCGTGAGAAGTACCGTTTCTTTCCCAGTTTATGTATTTATGCCCACATCATAATTCTGCTAAGCAACTAATAATGCTAACTCTCATACTATAGACAAGTTTTCTCATCAGACCCTGGTGATGAAAAGCCTGCAGTAAAGCCAAAAACCAAGAGGAAGAAAACCAAAAGCTCCGGGTGAGCGACCTCGACCTGACCTTTTTGTTCCTGAACATATTCGTTTTCTGTCCCTTCTGATTTCAAATGATTCATAATTTTTTATTGCAGGATTGAAACGGTTCTTTTAAACGAAAAGCCTCCATCTCCATGCTTACAAAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAACGTAGCGAGGTCGACATCAGTTCTCGACAATCCTAACCAAGCATTACGCCTACTTTCTTCATCTGGCTTGTTAAGTAAGAAATAGCATATTTGTTTGCAAGTCTATTTATTACATCTCTGTTAGCTTCGACAGGATAATGTATAATGTATTTGAGAACTGGTTGAGTTCAAGACTGATTCAACATGGAGAGTGAAAAAGTTCGTTGTCCTTTTATAATGAAGACGAC

mRNA sequence

CTGCTCGTCATCAGTAAGCGCAATTCTACAAATCCCTAAAACCCTCACAGAAACCCTAAAAAGATCGTTGCTATTCGGATGTCGGACAGAGAAGATACCGATTCCGACGCCCCGGAGGAGTTCACCGCCGATCAGGGAATACAGCAAGATCAGGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAGGGTTGTTCGTGAAGGAAAAGAGCGTCGTAGACTGTGGGCTGAAAAGAAAACACCTCGCTCATCTAAAAAGGGCGAAATTGTCGAAGACAGAGAAGAAACCCCTACGCACAATGATCAAGTCAGCAAGTTGGGAATGCTTCCCAGTAATCTTGTCCAACTGCTTGCAGACCGTGAGAAACAAGTTTTCTCATCAGACCCTGGTGATGAAAAGCCTGCAGTAAAGCCAAAAACCAAGAGGAAGAAAACCAAAAGCTCCGGGATTGAAACGGTTCTTTTAAACGAAAAGCCTCCATCTCCATGCTTACAAAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAACGTAGCGAGGTCGACATCAGTTCTCGACAATCCTAACCAAGCATTACGCCTACTTTCTTCATCTGGCTTGTTAAGTAAGAAATAGCATATTTGTTTGCAAGTCTATTTATTACATCTCTGTTAGCTTCGACAGGATAATGTATAATGTATTTGAGAACTGGTTGAGTTCAAGACTGATTCAACATGGAGAGTGAAAAAGTTCGTTGTCCTTTTATAATGAAGACGAC

Coding sequence (CDS)

ATGTCGGACAGAGAAGATACCGATTCCGACGCCCCGGAGGAGTTCACCGCCGATCAGGGAATACAGCAAGATCAGGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAGGGTTGTTCGTGAAGGAAAAGAGCGTCGTAGACTGTGGGCTGAAAAGAAAACACCTCGCTCATCTAAAAAGGGCGAAATTGTCGAAGACAGAGAAGAAACCCCTACGCACAATGATCAAGTCAGCAAGTTGGGAATGCTTCCCAGTAATCTTGTCCAACTGCTTGCAGACCGTGAGAAACAAGTTTTCTCATCAGACCCTGGTGATGAAAAGCCTGCAGTAAAGCCAAAAACCAAGAGGAAGAAAACCAAAAGCTCCGGGATTGAAACGGTTCTTTTAAACGAAAAGCCTCCATCTCCATGCTTACAAAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAACGTAGCGAGGTCGACATCAGTTCTCGACAATCCTAACCAAGCATTACGCCTACTTTCTTCATCTGGCTTGTTAAGTAAGAAATAG

Protein sequence

MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKKGEIVEDREETPTHNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKTKSSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSKK

Homology

[Close]

BLAST of Sed0003061 vs. NCBI nr
Match: KAG7035221.1 (hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 155/178 (87.08%), Postives = 164/178 (92.13%), Query Frame = 0


Query: 1   MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKK 60
           MSD  DTDSDAPEEFTA+QGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR+SKK
Sbjct: 1   MSDSNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  GEIVEDREETPTHNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKTK 120
           GE VED  ETP HNDQVSKLGMLPSNLVQLLA+REKQVFSSDPGDEKPA K KTKRKK+K
Sbjct: 61  GETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSKK 179
           SSGIETVLLNE+ PS CLQNSLEFLKKRKMN+ RS+SVLDN NQALRLLSSSGLL+KK
Sbjct: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]

BLAST of Sed0003061 vs. NCBI nr
Match: KAG6605258.1 (hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72
Identity = 154/178 (86.52%), Postives = 164/178 (92.13%), Query Frame = 0


Query: 1   MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKK 60
           MSD  DTDSDAPEEFTA+QGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR+SKK
Sbjct: 1   MSDSNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  GEIVEDREETPTHNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKTK 120
           GE VED  ETP HNDQVSKLGMLPSNLVQLLA+REKQVFSSDPGDEKPA K KTKRKK+K
Sbjct: 61  GETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSKK 179
           SSGI+TVLLNE+ PS CLQNSLEFLKKRKMN+ RS+SVLDN NQALRLLSSSGLL+KK
Sbjct: 121 SSGIKTVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]

BLAST of Sed0003061 vs. NCBI nr
Match: XP_022947715.1 (uncharacterized protein LOC111451498 [Cucurbita moschata])

HSP 1 Score: 282.3 bits (721), Expect = 2.8e-72
Identity = 154/178 (86.52%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKK 60
           MSD  DTDSDAPEEFTA+QGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR+SKK
Sbjct: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  GEIVEDREETPTHNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKTK 120
            E VED  ETP HNDQVSKLGMLPSNLVQLLA+REKQVFSSDPGDEKPA K KTKRKK+K
Sbjct: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSKK 179
           SSGIETVLLNE+ PS CLQNSLEFLKKRKMN+ RS+SVLDN NQALRLLSSSGLL+KK
Sbjct: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]

BLAST of Sed0003061 vs. NCBI nr
Match: XP_038901892.1 (uncharacterized protein LOC120088571 [Benincasa hispida])

HSP 1 Score: 282.0 bits (720), Expect = 3.7e-72
Identity = 152/179 (84.92%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKK 60
           MSDREDTDSDAPEEFTA+QG+QQD+EIRKVQKESKARVVREGKERRRLWAEKKTPR SKK
Sbjct: 1   MSDREDTDSDAPEEFTAEQGVQQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDREETP-THNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKT 120
           GE VED  E P  H+DQ+SKLGMLPSN+VQLL DREKQVFSSDP DEKPA+KPK+KRKKT
Sbjct: 61  GETVEDLAEPPRDHHDQISKLGMLPSNIVQLLVDREKQVFSSDPSDEKPAIKPKSKRKKT 120

Query: 121 KSSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSKK 179
           KSSGIETVLL+E+ PS CL NSLEFLKKRKMN+ RS+SVLDNPNQALRLLS+SGLL KK
Sbjct: 121 KSSGIETVLLSERTPSQCLHNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLIKK 179

[Close]

BLAST of Sed0003061 vs. NCBI nr
Match: XP_004148046.1 (uncharacterized protein LOC101208336 [Cucumis sativus] >KGN62039.1 hypothetical protein Csa_006734 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 6.3e-72
Identity = 150/178 (84.27%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKK 60
           MSDRE+TDSDAPEEFTA+QG+QQD+EIRKVQKESKARV+REGKERRRLWAEKKTPR SKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDREETPTHNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKTK 120
           GEIVED  E P ++D++SKLG LPSN+VQLL DREKQVFSSD GDEKPA+KPK KRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120

Query: 121 SSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSKK 179
           SSGIETVLLNE+ PS CLQNSLEFLKKRKMNVARS++VL NPNQA RLLSSSGLL+KK
Sbjct: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 178

[Close]

BLAST of Sed0003061 vs. ExPASy TrEMBL
Match: A0A6J1G7P4 (uncharacterized protein LOC111451498 OS=Cucurbita moschata OX=3662 GN=LOC111451498 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.4e-72
Identity = 154/178 (86.52%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKK 60
           MSD  DTDSDAPEEFTA+QGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR+SKK
Sbjct: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  GEIVEDREETPTHNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKTK 120
            E VED  ETP HNDQVSKLGMLPSNLVQLLA+REKQVFSSDPGDEKPA K KTKRKK+K
Sbjct: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSKK 179
           SSGIETVLLNE+ PS CLQNSLEFLKKRKMN+ RS+SVLDN NQALRLLSSSGLL+KK
Sbjct: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]

BLAST of Sed0003061 vs. ExPASy TrEMBL
Match: A0A0A0LM07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292200 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.0e-72
Identity = 150/178 (84.27%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKK 60
           MSDRE+TDSDAPEEFTA+QG+QQD+EIRKVQKESKARV+REGKERRRLWAEKKTPR SKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDREETPTHNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKTK 120
           GEIVED  E P ++D++SKLG LPSN+VQLL DREKQVFSSD GDEKPA+KPK KRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120

Query: 121 SSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSKK 179
           SSGIETVLLNE+ PS CLQNSLEFLKKRKMNVARS++VL NPNQA RLLSSSGLL+KK
Sbjct: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 178

[Close]

BLAST of Sed0003061 vs. ExPASy TrEMBL
Match: A0A6J1DXW1 (uncharacterized protein LOC111025162 OS=Momordica charantia OX=3673 GN=LOC111025162 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.8e-72
Identity = 152/177 (85.88%), Postives = 162/177 (91.53%), Query Frame = 0


Query: 1   MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKK 60
           MSD EDTDSDAPEEFTA+QGIQQDQEI KVQ ESKARVVREGKERRRLWAEKKTPR SKK
Sbjct: 1   MSDGEDTDSDAPEEFTAEQGIQQDQEITKVQNESKARVVREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDREETPTHNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKTK 120
           GE VED  E P+H DQ SKLGMLPSNLVQLLADREKQVFSSDPGDEKPA KPKTKRKKTK
Sbjct: 61  GETVEDVAEIPSHIDQSSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAAKPKTKRKKTK 120

Query: 121 SSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSK 178
           SSGIETV+LN++ P+ CLQNS+EFLKKRKMN+ RS+SVLDNPNQALR LSSSGLL+K
Sbjct: 121 SSGIETVVLNKRQPAQCLQNSMEFLKKRKMNIPRSSSVLDNPNQALRRLSSSGLLTK 177

[Close]

BLAST of Sed0003061 vs. ExPASy TrEMBL
Match: A0A6J1KZ49 (uncharacterized protein LOC111499570 OS=Cucurbita maxima OX=3661 GN=LOC111499570 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.3e-70
Identity = 150/178 (84.27%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKK 60
           MSD  DTDSDAPEEFTA+QGIQQD+EIRK+QKES ARVVREGKERRR WAEKKTPR SKK
Sbjct: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKLQKESSARVVREGKERRRQWAEKKTPRPSKK 60

Query: 61  GEIVEDREETPTHNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKTK 120
           GE VED  ETP HNDQVSKLGMLPSNLVQLLA+REKQVFSSDPGDEKPA K KT+R+K+K
Sbjct: 61  GETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTRRRKSK 120

Query: 121 SSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSKK 179
           SSGIETVLLN + PS C QNSLEFLKKRKMN+ RS+SVLDN NQALRLLSSSGLL+KK
Sbjct: 121 SSGIETVLLNARAPSQCSQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]

BLAST of Sed0003061 vs. ExPASy TrEMBL
Match: A0A5A7TWK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002660 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.4e-69
Identity = 149/179 (83.24%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MSDREDTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSSKK 60
           MSDRE+TDSDAPEEFTA+QG+QQD+EIRKVQ ESKARV+REGKERRRLWAEKKTPR SKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQNESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDREETPTHNDQVSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTKRKKTK 120
           GEIVED  E P ++D+VSKLG LPSN+VQLL DREKQVFSSD GDEKPA+KPK KRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKVSKLGTLPSNVVQLLVDREKQVFSSDLGDEKPAIKPKQKRKKTK 120

Query: 121 -SSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLLSKK 179
            SSGIETVLL+E+ PS CLQNSLEFLKKRKMNVARS++VL+NPNQA RLLSSSGLL+KK
Sbjct: 121 SSSGIETVLLSERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179

[Close]

BLAST of Sed0003061 vs. TAIR 10
Match: AT4G37090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-30
Identity = 84/183 (45.90%), Postives = 119/183 (65.03%), Query Frame = 0


Query: 1   MSDRE--DTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSS 60
           MSD +  D+DSDAPEE T +Q   +++ + K+Q+E+K RV RE KERR+L AE+ T R S
Sbjct: 1   MSDNKDRDSDSDAPEELTQEQAKLEEEALWKIQRENKNRVSREKKERRKLMAEQVTLRKS 60

Query: 61  KKGEIVED--REETPTHNDQ-VSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTK 120
           +K EI+ED   EE P  N + ++  G L  +++  LA+REKQ   SD  +E+  +    +
Sbjct: 61  RKIEIIEDVVEEEEPEENSEALANKGFLSKDIIDFLAEREKQKAESD-SEEEEIIDELPR 120

Query: 121 RKKTKSSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLL 179
           +KK KSSGIETV+  E PP  CL+  L+FLK R+  V RS+SV+ N  QALRL + + L 
Sbjct: 121 KKKQKSSGIETVIYKEIPPPECLKTGLDFLKMRRAQVPRSSSVIKNSGQALRLATGAALA 180

[Close]

BLAST of Sed0003061 vs. TAIR 10
Match: AT4G37090.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 9.2e-29
Identity = 84/183 (45.90%), Postives = 119/183 (65.03%), Query Frame = 0


Query: 1   MSDRE--DTDSDAPEEFTADQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRSS 60
           MSD +  D+DSDAPEE T +Q   +++ + K+Q+E+K RV RE KERR+L AE+ T R S
Sbjct: 1   MSDNKDRDSDSDAPEELTQEQ--LEEEALWKIQRENKNRVSREKKERRKLMAEQVTLRKS 60

Query: 61  KKGEIVED--REETPTHNDQ-VSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAVKPKTK 120
           +K EI+ED   EE P  N + ++  G L  +++  LA+REKQ   SD  +E+  +    +
Sbjct: 61  RKIEIIEDVVEEEEPEENSEALANKGFLSKDIIDFLAEREKQKAESD-SEEEEIIDELPR 120

Query: 121 RKKTKSSGIETVLLNEKPPSPCLQNSLEFLKKRKMNVARSTSVLDNPNQALRLLSSSGLL 179
           +KK KSSGIETV+  E PP  CL+  L+FLK R+  V RS+SV+ N  QALRL + + L 
Sbjct: 121 KKKQKSSGIETVIYKEIPPPECLKTGLDFLKMRRAQVPRSSSVIKNSGQALRLATGAALA 180

The following BLAST results are available for this feature:

BLAST of Sed0003061 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035221.1	4.3e-73	87.08	hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6605258.1	1.3e-72	86.52	hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022947715.1	2.8e-72	86.52	uncharacterized protein LOC111451498 [Cucurbita moschata]	[more]
XP_038901892.1	3.7e-72	84.92	uncharacterized protein LOC120088571 [Benincasa hispida]	[more]
XP_004148046.1	6.3e-72	84.27	uncharacterized protein LOC101208336 [Cucumis sativus] >KGN62039.1 hypothetical ...	[more]

BLAST of Sed0003061 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0003061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7P4	1.4e-72	86.52	uncharacterized protein LOC111451498 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A0A0LM07	3.0e-72	84.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292200 PE=4 SV=1	[more]
A0A6J1DXW1	6.8e-72	85.88	uncharacterized protein LOC111025162 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1KZ49	1.3e-70	84.27	uncharacterized protein LOC111499570 OS=Cucurbita maxima OX=3661 GN=LOC111499570...	[more]
A0A5A7TWK6	1.4e-69	83.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0003061 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37090.1	4.9e-30	45.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G37090.2	9.2e-29	45.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..112
None	No IPR available	PANTHER	PTHR36387	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE-2, 6-DIAMINOPIMELATE LIGASE	coord: 4..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003061.1	Sed0003061.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016874	ligase activity