Sed0003016 (gene) Chayote v1

Overview


Name	Sed0003016
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SAUR-like auxin-responsive protein family
Location	LG05: 35265940 .. 35266361 (+)
RNA-Seq Expression	Sed0003016
Synteny	Sed0003016

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAATCAAATTTCTAAGTTTGGTATTCCTTTAAGGGTCTCTCATATTTCATTTCAAATCAACATGGGCTTCCGTTTGCCTCGAATTGTTTACTCTAAGCAGAGTCTGCAGCGATCTTCATCAACCGGAAATGGAACGTCTCCAAAGGCTGTCGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCGTCCCACTATCTTACTTGAATCAACCTTCATTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATTCCTTGCACTGAAGAAACTTTCCTCGATCTCACTCGAAGTTTGAATGACTTGTGAAGTAGAGAGATTCAATTCTAGATATTACAGAAAAAGGATTAGATGTAAATACAAT

mRNA sequence

CACAAATCAAATTTCTAAGTTTGGTATTCCTTTAAGGGTCTCTCATATTTCATTTCAAATCAACATGGGCTTCCGTTTGCCTCGAATTGTTTACTCTAAGCAGAGTCTGCAGCGATCTTCATCAACCGGAAATGGAACGTCTCCAAAGGCTGTCGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCGTCCCACTATCTTACTTGAATCAACCTTCATTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATTCCTTGCACTGAAGAAACTTTCCTCGATCTCACTCGAAGTTTGAATGACTTGTGAAGTAGAGAGATTCAATTCTAGATATTACAGAAAAAGGATTAGATGTAAATACAAT

Coding sequence (CDS)

ATGGGCTTCCGTTTGCCTCGAATTGTTTACTCTAAGCAGAGTCTGCAGCGATCTTCATCAACCGGAAATGGAACGTCTCCAAAGGCTGTCGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCGTCCCACTATCTTACTTGAATCAACCTTCATTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATTCCTTGCACTGAAGAAACTTTCCTCGATCTCACTCGAAGTTTGAATGACTTGTGA

Protein sequence

MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLNDL

Homology

[Close]

BLAST of Sed0003016 vs. NCBI nr
Match: XP_022952257.1 (auxin-induced protein 15A-like [Cucurbita moschata])

HSP 1 Score: 190.3 bits (482), Expect = 8.2e-45
Identity = 90/99 (90.91%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND 100
           FQDLLSQAEEEFGY+HPMGGITIPC+E+ FLDLTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDNFLDLTRSLND 99

[Close]

BLAST of Sed0003016 vs. NCBI nr
Match: XP_022952255.1 (auxin-induced protein X10A-like [Cucurbita moschata] >KAG6572085.1 hypothetical protein SDJN03_28813, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 90/99 (90.91%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND 100
           FQDLLSQAEEEFGY+HPMGGITIPC+E+ FLDLTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDDFLDLTRSLND 99

[Close]

BLAST of Sed0003016 vs. NCBI nr
Match: XP_038887900.1 (auxin-induced protein X10A-like [Benincasa hispida])

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44
Identity = 90/99 (90.91%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPS
Sbjct: 40  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 99

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND 100
           FQDLLSQAEEEFGY+HPMGGITIPC E+ FLDLTRSLND
Sbjct: 100 FQDLLSQAEEEFGYNHPMGGITIPCREDEFLDLTRSLND 138

[Close]

BLAST of Sed0003016 vs. NCBI nr
Match: XP_023553777.1 (auxin-induced protein X10A-like [Cucurbita pepo subsp. pepo] >XP_023553882.1 auxin-induced protein X10A-like [Cucurbita pepo subsp. pepo] >XP_023554331.1 auxin-induced protein X10A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44
Identity = 89/99 (89.90%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND 100
           FQDLLSQAEEEFGY+HPMGGITIPC+E+ FL+LTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDDFLELTRSLND 99

[Close]

BLAST of Sed0003016 vs. NCBI nr
Match: XP_022135743.1 (auxin-induced protein 15A-like [Momordica charantia])

HSP 1 Score: 187.2 bits (474), Expect = 6.9e-44
Identity = 87/99 (87.88%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLPRIV++KQSL+RSSSTGNG SPKAVDVPKGYFTVYVGEVQKKRFV+PLSYLN+PS
Sbjct: 1   MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND 100
           FQDLL QAEEEFGYDHPMGGITIPC+E+TFL LT+SLN+
Sbjct: 61  FQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNN 99

[Close]

BLAST of Sed0003016 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.5e-29
Identity = 61/100 (61.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLP        ++++S   N  S K+V+VPKGY  VYVG+ + +RF++P+SYLNQPS
Sbjct: 1   MGFRLP-------GIRKTSIAANQASSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLNDL 101
           FQDLL+QAEEEFGYDHPMGG+TIPC E+ FL +T  LNDL
Sbjct: 61  FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLNDL 92

[Close]

BLAST of Sed0003016 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.0e-27
Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFR+  IV      +R+S      + K VDVPKGY  VYVG+ + +RF +P+SYLN+PS
Sbjct: 1   MGFRIAGIV------RRTSFYTTQAASKRVDVPKGYAAVYVGD-KMRRFTIPVSYLNEPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLNDL 101
           FQ+LLSQAEEEFGYDHPMGG+TIPC EE FL++T  LN+L
Sbjct: 61  FQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLNEL 93

[Close]

BLAST of Sed0003016 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.3e-26
Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
          MGFRLP        ++++S + N  S KAVDV KGY  VYVGE + +RFV+P+SYLN+PS
Sbjct: 1  MGFRLP-------GIRKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPS 60

Query: 61 FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN 99
          FQDLLSQAEEEFGY HP GG+TIPC+E+ F  +T  LN
Sbjct: 61 FQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of Sed0003016 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-26
Identity = 58/98 (59.18%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 1  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
          MGFRLP        ++++ S  N  S K +D PKGY  VYVGE   KRFV+P+S+LNQP 
Sbjct: 1  MGFRLP-------GIRKTLSARNEASSKVLDAPKGYLAVYVGE-NMKRFVIPVSHLNQPL 60

Query: 61 FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN 99
          FQDLLSQAEEEFGYDHPMGG+TIPC+E+ F  +T  L+
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLS 90

[Close]

BLAST of Sed0003016 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 5.2e-26
Identity = 62/98 (63.27%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 1  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
          MGFRLP I        R +S       KA D PKGY  VYVGE + KRFV+P+SYLNQPS
Sbjct: 1  MGFRLPGI--------RKAS-------KAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPS 60

Query: 61 FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN 99
          FQDLLSQAEEEFGYDHPMGG+TIPC+E+ F  +T  LN
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of Sed0003016 vs. ExPASy TrEMBL
Match: A0A6J1GJW5 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45
Identity = 90/99 (90.91%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND 100
           FQDLLSQAEEEFGY+HPMGGITIPC+E+ FLDLTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDNFLDLTRSLND 99

[Close]

BLAST of Sed0003016 vs. ExPASy TrEMBL
Match: A0A6J1GL91 (auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.2e-45
Identity = 90/99 (90.91%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND 100
           FQDLLSQAEEEFGY+HPMGGITIPC+E+ FLDLTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDDFLDLTRSLND 99

[Close]

BLAST of Sed0003016 vs. ExPASy TrEMBL
Match: A0A6J1HWI6 (auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468493 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-44
Identity = 89/99 (89.90%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND 100
           FQDLLSQAEEEFGY+HPMGGITIPC+E  FLDLTR+LND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEYDFLDLTRNLND 99

[Close]

BLAST of Sed0003016 vs. ExPASy TrEMBL
Match: A0A6J1C5R3 (auxin-induced protein 15A-like OS=Momordica charantia OX=3673 GN=LOC111007633 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-44
Identity = 87/99 (87.88%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLPRIV++KQSL+RSSSTGNG SPKAVDVPKGYFTVYVGEVQKKRFV+PLSYLN+PS
Sbjct: 1   MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND 100
           FQDLL QAEEEFGYDHPMGGITIPC+E+TFL LT+SLN+
Sbjct: 61  FQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNN 99

[Close]

BLAST of Sed0003016 vs. ExPASy TrEMBL
Match: A0A6J1I180 (auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468494 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43
Identity = 86/99 (86.87%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPS 60
           MGFRLPRIV++K+SLQRSSS+GNG S KAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPS
Sbjct: 1   MGFRLPRIVHAKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND 100
           FQDLLSQAEEEFGY+HPMGGIT+PC+E+ FLDLTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITVPCSEDDFLDLTRSLND 99

[Close]

BLAST of Sed0003016 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 128.3 bits (321), Expect = 3.6e-30
Identity = 59/99 (59.60%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 1  MGFRLPRIVY-SKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQP 60
          M  R+PR++  SKQ L+++    + +S  ++DVPKGY  VYVGE   KRFVVP+SYL+QP
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN 99
          SFQDLL +AEEEFG+DHPMGG+TIPC+EE F+DL    N
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Sed0003016 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 7.7e-25
Identity = 51/80 (63.75%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 18 SSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHP 77
          S STG G++      PKG+  VYVGE QKKR++VP+SYLNQPSFQ LLS++EEEFG+DHP
Sbjct: 15 SRSTGAGSA-----APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHP 74

Query: 78 MGGITIPCTEETFLDLTRSL 98
          MGG+TIPC E+TF+++T  L
Sbjct: 75 MGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0003016 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-24
Identity = 51/91 (56.04%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 8  IVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQ 67
          ++ +K+ L RS++  +         PKG+  VYVGE QKKR++VPLSYLNQPSFQ LLS+
Sbjct: 7  LLVAKKILSRSAAAVSAP-------PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSK 66

Query: 68 AEEEFGYDHPMGGITIPCTEETFLDLTRSLN 99
          +EEEFG+DHPMGG+TIPC E+TF+++T  L+
Sbjct: 67 SEEEFGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Sed0003016 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 2.9e-24
Identity = 53/99 (53.54%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 1  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGE-VQKKRFVVPLSYLNQP 60
          M  R+ R++ S + L +S S     S   V +PKG+  VYVGE +QK+RFVVP++YL+ P
Sbjct: 1  MAIRISRVLQSSKQLLKSLS----HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHP 60

Query: 61 SFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN 99
           FQ LL +AEEEFG+DHPMGG+TIPCTE+ F+DL   L+
Sbjct: 61 CFQKLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLS 95

[Close]

BLAST of Sed0003016 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 2.9e-24
Identity = 56/98 (57.14%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 1  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGE--VQKKRFVVPLSYLNQ 60
          M  RL R++ SKQS ++ S            VPKG+  VYVGE    KKRFVVP+SYLN 
Sbjct: 1  MAIRLSRVINSKQSQKQQSR-----------VPKGHVAVYVGEEMESKKRFVVPISYLNH 60

Query: 61 PSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRS 97
          PSFQ LLS+AEEEFG++HP+GG+TIPC EETF+ L  S
Sbjct: 61 PSFQGLLSRAEEEFGFNHPIGGLTIPCREETFVGLLNS 87

The following BLAST results are available for this feature:

BLAST of Sed0003016 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952257.1	8.2e-45	90.91	auxin-induced protein 15A-like [Cucurbita moschata]	[more]
XP_022952255.1	1.1e-44	90.91	auxin-induced protein X10A-like [Cucurbita moschata] >KAG6572085.1 hypothetical ...	[more]
XP_038887900.1	3.1e-44	90.91	auxin-induced protein X10A-like [Benincasa hispida]	[more]
XP_023553777.1	3.1e-44	89.90	auxin-induced protein X10A-like [Cucurbita pepo subsp. pepo] >XP_023553882.1 aux...	[more]
XP_022135743.1	6.9e-44	87.88	auxin-induced protein 15A-like [Momordica charantia]	[more]

BLAST of Sed0003016 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33080	6.5e-29	61.00	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33079	8.0e-27	60.00	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33083	2.3e-26	60.20	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
P32295	4.0e-26	59.18	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33081	5.2e-26	63.27	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Sed0003016 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJW5	4.0e-45	90.91	auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=...	[more]
A0A6J1GL91	5.2e-45	90.91	auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE...	[more]
A0A6J1HWI6	3.4e-44	89.90	auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468493 PE=3...	[more]
A0A6J1C5R3	3.4e-44	87.88	auxin-induced protein 15A-like OS=Momordica charantia OX=3673 GN=LOC111007633 PE...	[more]
A0A6J1I180	1.7e-43	86.87	auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468494 PE=3...	[more]

BLAST of Sed0003016 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	3.6e-30	59.60	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	7.7e-25	63.75	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.0e-24	56.04	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.9e-24	53.54	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	2.9e-24	57.14	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 17..96 e-value: 3.7E-25 score: 87.9
None	No IPR available	PANTHER	PTHR31929:SF69	SUBFAMILY NOT NAMED	coord: 11..96
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 11..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003016.1	Sed0003016.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin