Sed0002801 (gene) Chayote v1

Overview


Name	Sed0002801
Type	gene
Organism	Sechium edule (Chayote v1)
Description	glycine-rich cell wall structural protein 1.8-like
Location	LG04: 7175583 .. 7186364 (+)
RNA-Seq Expression	Sed0002801
Synteny	Sed0002801

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGCCCAAGTGATTGGTCTAGGTGGTAATTTCTCGATCATCTCATATGTATTGATTCCATCTAAGAAATGTTGGGATGCAAACGAAGTATCCCACATTGGTTAATTAGATGAAGGAAAGATCATGGGTATATAAGTGATGACAATCATCTCCATTTATATGAGGCATTTTGGCCAAAGTGAACAATATCACATCAATGTGGAGATTCAGGTAGGGTTGTCATCCTTATCTACACTGGGGAGTTCAAGTGCCCAAAAGTTGTCTGATTTCAATATTACTTTAGTTGATCAAAGAATTCTTTAGGAGGGGTTTGTTAATTTGAATATTTAATAAGTTATTACAAATGAGCTTTTACCCTCCATCAAAAAATTATATCTAGACAAGTTATTATGATTATTCAAAATAATCATTCATTTTAGCCACTAAAAATTAACTCAAAATAGTAGCCCGATAGAATATGGGACAATATTAATATTAATTTTGTTTCTTGGTGTACTAAATCTCCCTTTTTCAGAAGATGCATAAAATATTTTTATATACCAGACACACTTTTATTAGATGCATGAAATTTTTATATGAAAATTCGGGGATGTTTGGCCTGCTGGGAAGGTAAGGGAAGTGTTCCTTCCTAGCGTTTGGCCCACTGTCAAATATTAACTTGGCTAAATTGTTTTAATCAGGCGCGTGCAGTCCACGCGCCAGAATTATCCTGGTGCGTGCGCGCCTATTTCTCTCTCTCTCTTTTTTTTTTTTTAAATTTCAAAATACTGCTTTCTTTTTGTTTTTCTTTGTGTTTTTCTTGCACTCTTTTCGTTCATTTTTCTTTATTTTGTTTCTACCTTTGTTATGTATATATATATATTTTTAGATATGTTATGTATAATTTTAATTTTAATTTCAAATTAAACTTTTTTTCTTGGTACATTTTTTAGTTATTTATTTTTGAGAATTAGTTTGTTTATTTTAGTTATGTATATAGTTTTATTTCTAATTAATGTTATCTTCCTTCAATAATTTAAGAAAAAAAAATTCAAATTAACATTTTGATTATATTATATATATATATATATGTATATTTTAAAATACAATATTTATCAATTTTTAATAGATCATATATTTAAATTATCAAGATTATATATTTATAATTTATTTTTTAATTTATTATATCTTTAAAGCATCACGTATTACTTAAAATTTATAATTTTTATTACTACACAATTAAACTATTTAAATTTTGAAGGAATTTTCAAAAATATAAATATTACTGAATAATTAAACGACTTAAATTTTTATTTTTTATTCTAATTCGTCTTACTTGAGTTTTTAAACTTAACTTTTGTTTATAAATATTAATAAATATTTTTTTAAAAAAAATTTATTGTATGAATATTATATTAAAAAAATATTTTTTTTAAACATTCCTTCTCAACTCATCCCACCAAACACCAATTAACTATCACATCAATTTTTTTCTCATCTCACCAAACACCAATTTACTCTCACTTCCTTTCCCTTCCTTTCCTTTCCTTTCCCTTTCCACCCTAGCCAAACAAGCCCTTCGTGTTTATCGAATAGTATAACCTGTTGGAATTATTGATTAATTAATTAATTTTCCAAATATTAATTTTTAATACTTCCCTATTTAGTGCCCATGAATTTAGTAACTTCCTAACCAACCCACTACCCACCTATTTGGAACCACTAGTTTATTATCGTGATTTTGTAAATGGAAAAATCACTTTTATTGAATATACAGAAAATACACAGAAGTGAAGCAGAGAGTTTTTACAGAACTCTTATACTTCTTTCTTCTACTTCAGAGTTGTTGGTCCTCTATGCCTACTCTTCCATTAAGAAACCACAACATTTGAGTTAGGAAGAGTGAGAGTGTAGAAGAACCAAGAACTCCATGTTCGTGTTGCTGTGTTCGTCTTGCAGTTGCAGAACTCCATGTTCGTGTTGATGTGTTCGTCTTGCAGTTGCAGATGCACATTGAGTCTTCATCTCTTGGTTACCAAAAACAAGGGCGGGAGGTATACCCTTTATTTTTATTACGTTTCCGCTGTAAAAATCAGGTTTATATATTTCTAGTGTTAGAAAATATCTAACATTTGGTATCAGAGCCAGTTTAGGCCTCTGCTTTGTTTTGGTAGCCATTAATGGAGTTCTGGGCTGTTTTTTGATTTTGTGTTATTTTTAACAATAACATAATGAATTAGTAGGAAATTATTTTACAAGAATTTTCATTTAAAGTATGTGAATATTGTGAAATTTAAAATTTGGAATTGAGAATAAAAAGTTATGCCCAAATCTGAATTTTTTGTGTTATCTATGTTTTCCAAGCTTTTATATGTTCTGTAAAATGACAGAGCAGTGAGGATGACCCATTAATAAAAATAAATAATTACAGAAAGGAAATTACACATACTGATTTTCATTTTATATATTTGATTAAGCTTTTTTGATATCTTTGAGTTGGTAACTTTTTGGATTTTGCAATTTTTTTTTGTGTAATTATTGTATCTTGCAGAATTGACCGTATTATATTTTTTGTCAAAGTAATGAATTTTCTAATATATTTGAGCACAATTTATTTTTAATTATCTTTTGGCCAAATGGACTAAATTTAATTATTTGGGAGTAGATTTGATTCTCTAGCTACTGCTTATTACAAGATAAATAAATTCAAATCCATATATTTACCATTTGGTTGCTGGTAAATTGGTTTTGGAATTTTTTTTAATTTGTTTGTGATATGTTCTAGTAATCAATTTGTAATATTTATCAGTTGGATTTGATTATTTGGCTCGATGGATTTTTGGTTAATGTGTTTATTAAAATAATAAATCTACACCTGTATATTTTCCATCTGTTGTAATCCATATCTTTTGCTTGAGATATACTCATTGTTAAGAGATATGGTTTTGGCCAAATTTATGGATTTTATTTTTATTGATGATACTGCAATCTATTTTTGGCCCTGCTGATTATGTATTTGGATGGATTGATTTTGAATATTCTATGTCTATTAAAACAAATAATTTCCAATTTATATATTGCTGGTAAATTGGATCTGTTTTTTATTTGTTTGTGACATAATGCATTAATGGATATGCCAATTTTTTTAATTTTTGGCTAAGTTGGCTATCTCGATTTTGATTACTGTTTATTAAAAAAAAAAAATCAAATCCATTGTGTTCTGCTTTGGGATTTGATTATGTGGAATTATTTGTGTGGCTAGAGATTTGGTTATTTTTTTGACTTCCAGTAAAAATCTAAAGATATGACCAATTTTTGTTATATGCATATTGTACTACCTTATTTTTAATTTATTAAAAAAAATGGTAGAATTGCATATAAATAATATATGTTATTGAGAATTGATCTCTTATAGTTGTTGATCTAAATATTATATTATATATATTTTTATTGCCATAAATGACATGTAACATGTAGCTTGTTTAAATTTAAGAAATTTTAAAATAAAGTTGCTACAATTAAGAACCTTTTGTACGCACATATTTATGTCGAATCATTAAGCTAGTTGATTATTTTATTAACTAGATTGGTTCTTTAAATAATTTATGTGCGATTGTTGTGATCAATTTAATACATTATGCTTATTAAATTTGTTGGTATTAATTTAATAAAGTATGCATAATGGAATTATTGACAATGACTCAGTTTTATTTTATATTATCTATATTTTGGTTGCATGATTATTTTTATAATTATTTATGCAATATTAAGTTAGATAATATTATTTCTTTAGAAATACTTTAATATTGTTTGAAGCAATATTTGAGACTAAGTTTTATCATGTTTAAGTGATTCATATAATTTAATTAAATTAGAGAGTAGACACACTATCTTTAATTTAATTAATATTATAATAAAGTTTATTTGGATCACATTTGGATAATAAACATTAATTGTGATTAATATGTAATATGGTAAATCTTATCATGTTTCATATGATTAATTAGAACAAAATATTAAATTATATTTTCTAATTTTCCCACATGAATTAGAAGAAGGAACATAATTTAATAGTTTTATCATTAAGTTTAAATGAATCTAATTGAATTAAAACTTTAGACCACATACAAGTTTTATGTCACTAGATTCATATTTTTTTCATTATTCTAACTTAGTAGAATAATACTTTATTTAATTACGATAAAATATTAAATTATATTTTCTAATCTACCCACTGGGATTAGAAAAAGAAACATAATTTAATAGTTTTATCATTAAGTTTAAATGAATCTAATTGAATTAAAACTTTAGCCCACATGCAAGTTTTATGTCTCTAGATTCATATTTTCATTATTCTACCAAAGTAGAATAATACTTAATTTAATATACTTAGATAAAATATTAAATTATATTTTCACATGGATTAGAAAAAGGAATATAATTTGATAGGTTTATCATTATGGTTAAATGAATTTAATTGAATTAAAGCTTTAGTTCACATGCAAGTTTTATGTCACTAAAATCATTTTTCATTATTCTATTTCGGTAGAATATATTTCATATAATTAGGATAAAATATTAAATTATATTTTCTAATTTACCCACAAGGATTAGAAAAATGAACATAATTTAATATTTTTATCATTAAGTTTAAATGAATCTAGTTGAATTAAAACTTTCGCTCATATGCAAGTTTTATATTACTAGATTCATATTATTTATGATTCTACATTGGTAGGACATACTTCATATTAATTAGGATAAGATATTAAATTATATTTTTCTAATTTAACCACAAGGATTAGAAAAAATGAATATAATTTAATCTTATCATTATGCTTATATGAATCTAAATTGAATTAAAATTTTAGCCCACATATGTAAGTTTTATGTCATTAGATTCATATTTTTCATGCTTTTACATTGGTAGAACATGTTCATGATTCTACATTGGTAGAGCATACTTCATATTAGCTTCAAAGTTAGTAAAATGAGCATGATTAAGTCATTGTAGCAATTCAATATAAGTGTTTCTCTGAAATAAGATGTGTTGTTCCCGAGCTCAAATTCCTTATAAATTTGGAAGGGAATAATTGTTCTTCGTCTGGGGTAGAGCATTAGGTTTGTGGAATCAAGAAATGTTTAATTTCTTGAGAATCACTTGATTAGTGGATGCGATCGATCTCAGAATATTGATTATGAGAAAAATCATTTAGATGCTCAGTGTGTCACTTCAAGTGATGGACTAATCATTCTTGTTAACAATGCACCTTAAGTTTGTGTGTTGAAGAATCAGTCCTATAAAAACCACAATTTTTCCATCAATGATATTTTGATATTCCATGATGTCATCTCTTCATTTGGTTTCGAAGAGAAGATTATGGATTAATATATATACCAGAAGGTCAGTGGGAGACAGTAAATTTAGTCTTATGTCTTGTCATAAAAATGAGCTCGAACGAGAATAGATGAAGAACATTTCATCAACATTGGTTGTTGAGATGTTATTAAGTTTTAGAGTAATCTAGGTGTTGACCACTGGAGAGCTACAAAGAAATTTATAAGATTTCCTTTAAGGATCAAAAGATTATATGCTCATGTTTAGACGAACTTACCATGGAGGTTGAGTTCGTATTATGTTTTGAAGCTATCTCACATGGTGTATGGTTTAAGAGTTTCACTTTTGGGCTTAGAGTTATTGACTCTATTTGTAAGCCATTTAGAATGTACTATTACAACTCAAGTGTTGTTTTTAGAATGTGTTAAATATAAGAAAGTGGTCATTTAACACATTAACACTGAATTGATGTTTACTAATCCCTTAATTAAATGCATGCTACTAAAAAAATTTAGAGATCATGTAATCAGTATTTTATCGAAACTCTTATTTAATTTATATTTTCTCATTCAGTTGTGCACATACATATTTATTGTTGAGAAAATATTACTTTAGTATGGACCTCGAATAAACATAGGGTTTATTCATTTAAGTATGTGGTTTGGGTTGAGAAAAACACAATACATTGTGATATATGGAAGATAATACTCGCACTAAGATGACCTATCGCCATAATCCATATCTTGTTTTTCATTATGATATTGTTGACGTGTTCATGGGTCAAGTGGAAGAATCTTGGAATTATTGATTAATTAATTAATTTTCCAAATATTAATTTTTAATACTTCCCTATTTAGTGCCCCATGAATTTAATAACTTCCTAACCAACCCACTACCCACCTATTTGGAACCACTAGTTTATTATCGTGATTTTGTAAATGGAAAAATCACTTTTATTGAATATACAGAAAATACACAGAAGTGAAGCAAAGAGTTTTACAGAACTCTTCTACTTCGTTCTTTTACTTCATAGTTGGGGGTCCCCTATGCCTACTCTTTCATTAAGAAAACCACACCATTTGAGTTAGGAAGAGTGAGGGTGTAGAAGAACCAAGAACTCCATGTTCGTGTTGCTATGTTCGTCTTGCAGTTGCAGATGCACATTGGGTCTTAATCTCTCGGTTACCAAAAACAATGGCGGGAGGTATACGCTTTATTTTTATTACGTTTCCGCTGCAGGTAATTTTTAATCACGTTTATATATTTTTGGTGTTAGAAAAGATCTAACATAACCATCATAGCTTTTGAGATATGTCTTGAACCCATTAATGCCATGCAATTAATTAGTCGAGGTTCTCGTTGCCCGATCAACGAATAGGGGTGCAGGGGCAATGCCCTCGTTTCGCAAACACGTCTTGTTGTTTTCATAATCGCATTCTACATGTGTGAGCGCATTCTGTGTGCGTGAACGCACTCTAAAATGTTAGCATTTTCCGCATTCTGTTATCGCAATCTGTTTCCATAAATGTACTCATATTTGGGTCGTTTATTTGTAATAGGGTTTAATAAGAGGACATATATAAATCCTAACCGTATTATGATGTTCATTTTATAATTTGTAATTCGCTTTTCTTTAATAAAAATGCGATTTCTCTCTCGCGTGGACTAGCTAACACAACGTTAGTTAACCACGTAATTTTATGTATTGGTTTTCTTCTCTCTTTATTCTATTTGCTCATGTGTATTTTTAGAAATTTTTTCAATATTGCAAATGGGAAATTGTATAATATTTTTTCATTCGGGGGTTTCCCACCACGATCATTTTCCCACCACAAAAGAATCTAAAATATATATTTTGCATTTATATGTTAAATATGTTGTCATTTTTCCCACCATTTTATTGCAATTGGGAAATTGTTTAATGTTTCTTTCAAGTGGTGATTAGGAAAAACATGTGAAAATAATACGTAAACAATTCTAGTAATGCAAAGTCGTTTCAGAAGCCATTTCACTCTCAATCTTATAGCCGCTGAAGTATAAAAAACAGAGAAAAAAAAAAGCCCCAATAAAATATATGCTCTTTATTTAGTGTATTTTAAAAACGAATAAAAGTAATGGCTCACCGATATTAATATATATTTAGTGACTAAAAGATTTTGGGCTCGTTTTTTCCATCCTCAATTATCATAATCTAAAAAAAATATGTGTATTTTAAAAGGCAATAATGCTTCTAAAGAAAATTAATCAGGTTTTAAAATCTTTTTAGTTTGAGCAAAATTTATGTTAAGAGGTTGTATGCTAGAAATATTTTAGGCAAAAAACTGCATTTTTAATTTTAATATATTGATAAAATGATTATATTAGTCTTTATGTATGTATTAAATATTTAAAAATTAAAAAAATATAAAAGATATATGAAAACTAAAATTGAACATTATTAAAATATGAAGAGTAAAAATATATGATTTAAAACATAGAGACCGAATAGAACACTCCAAACATAAAGTCAAAAGGTGTGTTTTTCTCACCAACTTTTAAGTTAATTGAGAAAGTTTCAAAAGCTAAATCTCATTTGATAAAGACCCCGTTTGATAACTATTTTATTTTTATTTATTTTTTGAAATTTAGTCATACAACAACTACCGTACTATATGTTTTTTTCTTATATGGATATATATGTACATCTCACCTATATTTGTAAATACCAAACCAAAATTTGGAAACAAAAAAAAGTAGCTTCCAAGAGTTGTTTTTGTTTTTGAAAGTTAGTTAGCATTCATATATTTTTTTAAGGAAAGATGGATAGATCATAGGAAAGGTGGAACATGTTATAGGAAAATTGACTAAGAATAGTTTTATATTTTAAAAACTAAAAAAAAAGCCAAATGGTTATCAAACAACGCCTAAGTATTTGGTTTTCAGTTTTTTAAATTTAAACTTATCTTTACTCAAACTTCCTACCATCTTTCTTATAACGTATCTATCTTTTCAAAAACAAAAACGAAGTTTTTAGAAGTTACTTTGTTTTCTAAATTTTGGCTAGATTTTTAAAAATATAATATGTACATATTTAAATACGAAAAAATATATGACAAAATATTTGTTATAGGGTTAAATTTCAAAAATAAAAAATTAAAAACAAAATAACATTATCAAATGGACTAACTTTGTTTTTACAGTTTCATCAGAAAATATCGTGTTCAGTTAATAAATTATCGGCGCCTCATCATGATTTGCATATGGATTAACTAGTGGATACATTTCCAAATCATATTATTTGTAGGCATATGTACGTAGCATGCATTATATGCTAATTTCCAAACTAGCCCTTTGTTCAATTGTCTTCAACCTCTTCTTAGTAATTACTCACTAAGTGTTAAATATCAATACTTTTGCATTTTGATTATGTTCAAATTAAATCTTGTTAGCTATTTTGTTTTGTTTATTTAGTATTGGATTGTATCTTTAAATACTCGAGTTGACTCAATAATATTTTAACACTTCTTTAAACTCTTTATATAATTATTATGGAGTGGCTCAAGTGGTCAAAGAAGGTCTTAAGGTATTTAAGATTATGAACTCGAACAGTGTTATGGATATAAAAAAAAAATTCATCATTTTGTTTTCGAAATATAAGGTTACTCCAATAATTTTCCTACCTTTGATGGTAATTAGCCTCCCTCCCAATTTTACTCCTCTGATACCATATCACAAATAAAGAGGGAAAGTATATTTTCATTAAAATAGTTAATCCTATGTTTAAATACAGCTTATGGACAACTAACACAGAAGTTGTAAAGCTAATAACCAATCAACAGTGAATACAAGTTGTTAATGTGCTGTAACAAACTAAGCATAATTCTTAATCCAAATATACCTATGTTTTTAAAAACCAACAAAAATTTGAAATTTCAATTTAATTTTACTCATATTTTCTATCGTGTGTATCTAACCTTAAGAAAGTAGATAAATCTTAACAAAATTTTAAAAACAAAAACAAATTTTTAGAAGCTATATTTTTTTGTTTCTAAATTTTAGTTTGATTTCTATAAATATAAATAAGAGGTAGATATCCATATAGATGAAAACATTTAATATGATAGTTGTGGTAGGTTTAATTTCAAAAACCAAAAACTAAAAACAAACTGATTATGTAACCTGACCTAAATACATATGAAAATTGTATTGGGTGGGTTTTTCACAAAATATTCACTATTTTAGCTAAATTCTTAATTATTTACGTCCATTATCATTAATACATTCTTACATTATATTATACTTATTAATATGAGATATTTTTTCTCTTTCCGGTAAATCTTTCAAAATACTTTTCAAGATCATGTAAAGTGGAAAAAGATATCCATTGATACCATTTAGGTTAAACCTAACTTTTGAGCCTAATAACAAAAGGAAAACTGTACTGCTTGCCTCTTGAAACTCCGTAGAGCTGTGTATACTCAAATGCTATTTTTTCCACACGTGCGCCGTCCTTACCACTAAGCACACGATACTGTGCTGCTGCCTTCCCATATTTTCCTATATAAGGAGATCCATAGAGGTTGATACTTAAAGCACTAATTATCAGTAAAATGGGTATACAAAGAGTTTTGTGCCTTGGCCTTCTTCTCCTTGTGAGTTTAGGCTTAGCTTCCGCAGCTAGAAGCCTTCTAGTTTATGATCCTCCTGCACGCCACAATGAGTATGATCGCCCCAACCCAAGAGGAGAGTTCGATCACGACCATCATGACGAATCCAACGACAACGTATACGGTGGAAGTGCTGGTAGAGGATATGGAGTGAGTGGCTCTGCTCTCGGAAGCTCGGGATACGGTAGTGGTGGAAGTGCTGGATATGGAGGAAGCCAAGGTGGACGTGGAGATGGTTATGGTAAAGACGGGCGTGGAGGATATGGAAGCGGAGGAGACCGGGGCGTAGGCTATGACAATAGAGGGAGTGTTGGATATGGAAGCGGAGGAGACCGGGGTGTAGGCTATGATAATAGAGGGAGTGTTGGATATGGAAGCGGAGGAGACCGTGGTGTAGGCTATGATAATAGAGGGAGTGTTGGATATGGAAGCGGCGGAGACCGCGGTGTCGGCTATGATAATAGAGGGAGTGTTGGATATGGAAGCGGAGGAGAACGCGGTGTAGGCTATGACAATAGAGGGAGTGTTGGATATGGAAATGGAGGAAGCGGAGGCTATGGAAGTGAAAAAGGGAATGGATACGGCCAAAGAGGAGACCATGGAGTAGGATATGATAGTAGAGGAAGTGTTGGGTCTGGAAGTGATTATGGAAATTCTCGAGGATATGGCAATGGAAATGGACAAGCTGGTGGTGCCTATGGCAATGGAAATGGCTCAGCTGGAACTGCTTATGGCAGTAGTGGAAGTGCTCATGGAGGAGAACATGACAATAACAAAGGAAGTGGAGAGGAAGGAGGTTCTGATGGTGGATACTAA

mRNA sequence

ATGGGCGCCCAAGTGATTGGTCTAGGTGGCTTAGCTTCCGCAGCTAGAAGCCTTCTAGTTTATGATCCTCCTGCACGCCACAATGAGTATGATCGCCCCAACCCAAGAGGAGAGTTCGATCACGACCATCATGACGAATCCAACGACAACGTATACGGTGGAAGTGCTGGTAGAGGATATGGAGTGAGTGGCTCTGCTCTCGGAAGCTCGGGATACGGTAGTGGTGGAAGTGCTGGATATGGAGGAAGCCAAGGTGGACGTGGAGATGGTTATGGTAAAGACGGGCGTGGAGGATATGGAAGCGGAGGAGACCGGGGCGTAGGCTATGACAATAGAGGGAGTGTTGGATATGGAAGCGGAGGAGACCGGGGTGTAGGCTATGATAATAGAGGGAGTGTTGGATATGGAAGCGGAGGAGACCGTGGTGTAGGCTATGATAATAGAGGGAGTGTTGGATATGGAAGCGGCGGAGACCGCGGTGTCGGCTATGATAATAGAGGGAGTGTTGGATATGGAAGCGGAGGAGAACGCGGTGTAGGCTATGACAATAGAGGGAGTGTTGGATATGGAAATGGAGGAAGCGGAGGCTATGGAAGTGAAAAAGGGAATGGATACGGCCAAAGAGGAGACCATGGAGTAGGATATGATAGTAGAGGAAGTGTTGGGTCTGGAAGTGATTATGGAAATTCTCGAGGATATGGCAATGGAAATGGACAAGCTGGTGGTGCCTATGGCAATGGAAATGGCTCAGCTGGAACTGCTTATGGCAGTAGTGGAAGTGCTCATGGAGGAGAACATGACAATAACAAAGGAAGTGGAGAGGAAGGAGGTTCTGATGGTGGATACTAA

Coding sequence (CDS)

ATGGGCGCCCAAGTGATTGGTCTAGGTGGCTTAGCTTCCGCAGCTAGAAGCCTTCTAGTTTATGATCCTCCTGCACGCCACAATGAGTATGATCGCCCCAACCCAAGAGGAGAGTTCGATCACGACCATCATGACGAATCCAACGACAACGTATACGGTGGAAGTGCTGGTAGAGGATATGGAGTGAGTGGCTCTGCTCTCGGAAGCTCGGGATACGGTAGTGGTGGAAGTGCTGGATATGGAGGAAGCCAAGGTGGACGTGGAGATGGTTATGGTAAAGACGGGCGTGGAGGATATGGAAGCGGAGGAGACCGGGGCGTAGGCTATGACAATAGAGGGAGTGTTGGATATGGAAGCGGAGGAGACCGGGGTGTAGGCTATGATAATAGAGGGAGTGTTGGATATGGAAGCGGAGGAGACCGTGGTGTAGGCTATGATAATAGAGGGAGTGTTGGATATGGAAGCGGCGGAGACCGCGGTGTCGGCTATGATAATAGAGGGAGTGTTGGATATGGAAGCGGAGGAGAACGCGGTGTAGGCTATGACAATAGAGGGAGTGTTGGATATGGAAATGGAGGAAGCGGAGGCTATGGAAGTGAAAAAGGGAATGGATACGGCCAAAGAGGAGACCATGGAGTAGGATATGATAGTAGAGGAAGTGTTGGGTCTGGAAGTGATTATGGAAATTCTCGAGGATATGGCAATGGAAATGGACAAGCTGGTGGTGCCTATGGCAATGGAAATGGCTCAGCTGGAACTGCTTATGGCAGTAGTGGAAGTGCTCATGGAGGAGAACATGACAATAACAAAGGAAGTGGAGAGGAAGGAGGTTCTGATGGTGGATACTAA

Protein sequence

MGAQVIGLGGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALGSSGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGERGVGYDNRGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSRGYGNGNGQAGGAYGNGNGSAGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY

Homology

[Close]

BLAST of Sed0002801 vs. NCBI nr
Match: XP_022923448.1 (glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 150.2 bits (378), Expect = 2.6e-32
Identity = 149/279 (53.41%), Postives = 164/279 (58.78%), Query Frame = 0


Query: 5   VIGLGGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSG 64
           ++GL GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G GYG   
Sbjct: 14  LVGL-GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGGRSGGGYGDGS 73

Query: 65  SALGSSGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVG-YGSGGDR 124
           SALG SGYGSGG          RG GYG  G   YG G   GVG    GS   YG G D 
Sbjct: 74  SALGGSGYGSGGV---------RGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDH 133

Query: 125 GVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGERGVGYDN 184
           GVGY    S GY +GG+ G G      +GYGSG     GY+N G+ GYG G +  +GY +
Sbjct: 134 GVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSG-----GYENGGNGGYGQGRDHDIGYGS 193

Query: 185 RGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSRGYGNGNGQAGGA 244
           R   G GNG   GYG   G G G   D G G   RG  G GS  G S G G G G  G A
Sbjct: 194 RNGNGNGNGNGNGYGDSHGYGNGGGVDGGYG---RGD-GVGSHAGGS-GIGAGGGYGGHA 253

Query: 245 YGNGNGSAGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY 283
            G+G G AG AYG SG AHGGEHDN+KGSGEEGG DGGY
Sbjct: 254 GGSGIG-AGGAYG-SGGAHGGEHDNSKGSGEEGGYDGGY 270

[Close]

BLAST of Sed0002801 vs. NCBI nr
Match: XP_022923449.1 (glycine-rich cell wall structural protein 1.8-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-31
Identity = 148/281 (52.67%), Postives = 164/281 (58.36%), Query Frame = 0


Query: 5   VIGLGGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSG 64
           ++GL GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G GYG   
Sbjct: 14  LVGL-GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGGRSGGGYGDGS 73

Query: 65  SALGSSGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVGYGSGGDRG 124
           SALG SGYGSGG          RG GYG  G   YG G   GV     G  GYGSG   G
Sbjct: 74  SALGGSGYGSGGV---------RGSGYGNGGGNAYGGGVSSGV-----GGAGYGSGSRYG 133

Query: 125 VGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVG---YDNRGSVGYGSGGERGVGY 184
            G D+    G G  G R  GY+N G+ GYG G D  +G   Y+N G+ GYG G +  +GY
Sbjct: 134 GGEDH----GVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSYENGGNGGYGQGRDHDIGY 193

Query: 185 DNRGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSRGYGNGNGQAG 244
            +R   G GNG   GYG   G G G   D G G   RG  G GS  G S G G G G  G
Sbjct: 194 GSRNGNGNGNGNGNGYGDSHGYGNGGGVDGGYG---RGD-GVGSHAGGS-GIGAGGGYGG 253

Query: 245 GAYGNGNGSAGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY 283
            A G+G G AG AYG SG AHGGEHDN+KGSGEEGG DGGY
Sbjct: 254 HAGGSGIG-AGGAYG-SGGAHGGEHDNSKGSGEEGGYDGGY 268

[Close]

BLAST of Sed0002801 vs. NCBI nr
Match: XP_023552981.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-30
Identity = 146/276 (52.90%), Postives = 161/276 (58.33%), Query Frame = 0


Query: 10  GLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALGS 69
           GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DNVYGG +G GYGV GSALG 
Sbjct: 18  GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSALGG 77

Query: 70  SGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDN 129
           SGYGSGG          RG GYG  G   YG G   GV     G  GYGSG   G G D+
Sbjct: 78  SGYGSGGV---------RGSGYGNGGGNAYGGGVSSGV-----GGAGYGSGSRYGGGEDH 137

Query: 130 RGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGERGVGYDNRGSVGY 189
               G G GG R  GY+N G+ GYG G D  +GY +R     G+G   G GY +  S GY
Sbjct: 138 ----GVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRN----GNGNGNGNGYGD--SHGY 197

Query: 190 GNGG--SGGYGSEKGNGYGQRGDHGVGYDSRGS-VGSGSDYGNSRGYGNGNGQAGGAYGN 249
           GNGG   GGYG         RGD GVG  + GS +G+G  YG   G G+G G AGGAYG 
Sbjct: 198 GNGGGVDGGYG---------RGD-GVGGHAGGSGIGAGGGYGGHAG-GSGIG-AGGAYG- 245

Query: 250 GNGSAGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY 283
                      SG AHGGEHDN+KGSGEEGG DGGY
Sbjct: 258 -----------SGGAHGGEHDNSKGSGEEGGYDGGY 245

[Close]

BLAST of Sed0002801 vs. NCBI nr
Match: XP_023552983.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-30
Identity = 146/276 (52.90%), Postives = 161/276 (58.33%), Query Frame = 0


Query: 10  GLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALGS 69
           GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DNVYGG +G GYGV GSALG 
Sbjct: 18  GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVYGGRSGGGYGVGGSALGG 77

Query: 70  SGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDN 129
           SGYGSGG          RG GYG  G   YG G   GV     G  GYGSG   G G D+
Sbjct: 78  SGYGSGGV---------RGSGYGNGGGNAYGGGVSSGV-----GGAGYGSGSRYGGGEDH 137

Query: 130 RGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGERGVGYDNRGSVGY 189
               G G GG R  GY+N G+ GYG G D  +GY +R     G+G   G GY +  S GY
Sbjct: 138 ----GVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRN----GNGNGNGNGYGD--SHGY 197

Query: 190 GNGG--SGGYGSEKGNGYGQRGDHGVGYDSRGS-VGSGSDYGNSRGYGNGNGQAGGAYGN 249
           GNGG   GGYG         RGD GVG  + GS +G+G  YG   G G+G G AGGAYG 
Sbjct: 198 GNGGGVDGGYG---------RGD-GVGGHAGGSGIGAGGGYGGHAG-GSGIG-AGGAYG- 245

Query: 250 GNGSAGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY 283
                      SG AHGGEHDN+KGSGEEGG DGGY
Sbjct: 258 -----------SGGAHGGEHDNSKGSGEEGGYDGGY 245

[Close]

BLAST of Sed0002801 vs. NCBI nr
Match: XP_022923541.1 (glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 143.3 bits (360), Expect = 3.2e-30
Identity = 144/282 (51.06%), Postives = 163/282 (57.80%), Query Frame = 0


Query: 5   VIGLGGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSG 64
           ++GL GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G GYG   
Sbjct: 14  LVGL-GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGGRSGGGYGDGS 73

Query: 65  SALGSSGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVG-YGSGGDR 124
           SALG SGYGSGG          RG GYG  G   YG G + GVG    GS   YG G D 
Sbjct: 74  SALGGSGYGSGGV---------RGSGYGNGGGNAYGGGVNSGVGGAGYGSGSRYGGGEDH 133

Query: 125 GVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGERGVGYDN 184
           GVGY    S GY +GG+ G G      +GYGSG     GY+N G+ GYG G +  +GY +
Sbjct: 134 GVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSG-----GYENGGNGGYGQGRDHDIGYGS 193

Query: 185 RGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSRGYGNGNGQAGGA 244
           R     GNG   G G+  GNGYG    +G G    G  G G   G   G G+G G  GG 
Sbjct: 194 RN----GNGNGNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAG-GSGIGAGGGY 253

Query: 245 YGNGNGS---AGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY 283
            G+  GS   AG AYG SG AHGGEHDN+KGSG EGG DGGY
Sbjct: 254 GGHAGGSGIGAGGAYG-SGGAHGGEHDNSKGSG-EGGYDGGY 273

[Close]

BLAST of Sed0002801 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-09
Identity = 106/242 (43.80%), Postives = 117/242 (48.35%), Query Frame = 0


Query: 53  GGSAGRGY-GVSGSALGSSGYGSGGSAGYGGSQG--GRGDGYGKDGRGGYGSGGDRGVGY 112
           G   G GY G +GS  G  G GSGG  GY G  G  G G G G    GG G GGD+G GY
Sbjct: 37  GHGTGGGYGGAAGSYGGGGGGGSGGGGGYAGEHGVVGYGGGSGGGQGGGVGYGGDQGAGY 96

Query: 113 DNRGSVGYGSGGDRGVGY---DNRGSVGYGSGGDRGVGYDNRG--SVGYGSGGDRGVGYD 172
              G    GSGG  GV Y     RG  G G GG  G GY   G   +GYG GG  G G  
Sbjct: 97  GGGG----GSGGGGGVAYGGGGERGGYGGGQGGGAGGGYGAGGEHGIGYGGGGGSGAG-- 156

Query: 173 NRGSVGYGSGGERGVGYDNRGSVGYGNGG----SGGYGSEKGNGYGQRGDHGVGYDSRGS 232
             G  GY +GG +G GY   G  G G GG     GGYG  +G G G  G +G G +  G 
Sbjct: 157 --GGGGYNAGGAQGGGYGTGGGAGGGGGGGGDHGGGYGGGQGAGGGAGGGYGGGGEHGGG 216

Query: 233 VGSGSDYGNSRGYGNGNGQAGGAYGNGNGSAGTAYGSSGSAHGGEHDNNKGSGEEGGSDG 283
            G G   G   GYG G    GGA G   G AG  YG+     GGEH    G G+ GG+ G
Sbjct: 217 GGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGA-----GGEHGGGAGGGQGGGAGG 265

[Close]

BLAST of Sed0002801 vs. ExPASy Swiss-Prot
Match: Q9SIH2 (Glycine-rich protein DOT1 OS=Arabidopsis thaliana OX=3702 GN=DOT1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.4e-06
Identity = 92/222 (41.44%), Postives = 105/222 (47.30%), Query Frame = 0


Query: 53  GGSAGRGYGVSGSALGSSGYGSGGSAGYGGSQGGRGDGY-GKDGRGGYGSGGDRGVGYDN 112
           G SAG G G+ G   G SGY  GG +G GG  GG G+G+ G  G GG+G G   G G   
Sbjct: 43  GLSAGLGVGIGGGPGGGSGY--GGGSGEGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGP 102

Query: 113 RGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGY 172
            G  G GSG   G GY    + G+G GG  G      G  G G GG  G GY      G 
Sbjct: 103 GGGYGGGSGEGGGAGYGGGEAGGHGGGGGGGA-----GGGGGGGGGAHGGGY------GG 162

Query: 173 GSGGERGVGYDNRGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSR 232
           G G   G GY   G+ G+G GG GG G   G G G+ G HG GY + G  G G   G   
Sbjct: 163 GQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEGGAHGGGYGAGGGAGEGYGGGAGA 222

Query: 233 GYGNGNGQAGGAYGNGNGSAGTAYGSSGSAHGGEHDNNKGSG 274
           G   G G  GG  G G G  G    +SG  HGG     +GSG
Sbjct: 223 GGHGGGGGGGGGSGGGGGGGGGYAAASGYGHGGGAGGGEGSG 251

[Close]

BLAST of Sed0002801 vs. ExPASy TrEMBL
Match: A0A6J1E9N8 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431141 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-32
Identity = 149/279 (53.41%), Postives = 164/279 (58.78%), Query Frame = 0


Query: 5   VIGLGGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSG 64
           ++GL GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G GYG   
Sbjct: 14  LVGL-GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGGRSGGGYGDGS 73

Query: 65  SALGSSGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVG-YGSGGDR 124
           SALG SGYGSGG          RG GYG  G   YG G   GVG    GS   YG G D 
Sbjct: 74  SALGGSGYGSGGV---------RGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDH 133

Query: 125 GVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGERGVGYDN 184
           GVGY    S GY +GG+ G G      +GYGSG     GY+N G+ GYG G +  +GY +
Sbjct: 134 GVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSG-----GYENGGNGGYGQGRDHDIGYGS 193

Query: 185 RGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSRGYGNGNGQAGGA 244
           R   G GNG   GYG   G G G   D G G   RG  G GS  G S G G G G  G A
Sbjct: 194 RNGNGNGNGNGNGYGDSHGYGNGGGVDGGYG---RGD-GVGSHAGGS-GIGAGGGYGGHA 253

Query: 245 YGNGNGSAGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY 283
            G+G G AG AYG SG AHGGEHDN+KGSGEEGG DGGY
Sbjct: 254 GGSGIG-AGGAYG-SGGAHGGEHDNSKGSGEEGGYDGGY 270

[Close]

BLAST of Sed0002801 vs. ExPASy TrEMBL
Match: A0A6J1E6F7 (glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431141 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.4e-31
Identity = 148/281 (52.67%), Postives = 164/281 (58.36%), Query Frame = 0


Query: 5   VIGLGGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSG 64
           ++GL GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G GYG   
Sbjct: 14  LVGL-GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGGRSGGGYGDGS 73

Query: 65  SALGSSGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVGYGSGGDRG 124
           SALG SGYGSGG          RG GYG  G   YG G   GV     G  GYGSG   G
Sbjct: 74  SALGGSGYGSGGV---------RGSGYGNGGGNAYGGGVSSGV-----GGAGYGSGSRYG 133

Query: 125 VGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVG---YDNRGSVGYGSGGERGVGY 184
            G D+    G G  G R  GY+N G+ GYG G D  +G   Y+N G+ GYG G +  +GY
Sbjct: 134 GGEDH----GVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSYENGGNGGYGQGRDHDIGY 193

Query: 185 DNRGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSRGYGNGNGQAG 244
            +R   G GNG   GYG   G G G   D G G   RG  G GS  G S G G G G  G
Sbjct: 194 GSRNGNGNGNGNGNGYGDSHGYGNGGGVDGGYG---RGD-GVGSHAGGS-GIGAGGGYGG 253

Query: 245 GAYGNGNGSAGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY 283
            A G+G G AG AYG SG AHGGEHDN+KGSGEEGG DGGY
Sbjct: 254 HAGGSGIG-AGGAYG-SGGAHGGEHDNSKGSGEEGGYDGGY 268

[Close]

BLAST of Sed0002801 vs. ExPASy TrEMBL
Match: A0A6J1E726 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431202 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-30
Identity = 144/282 (51.06%), Postives = 163/282 (57.80%), Query Frame = 0


Query: 5   VIGLGGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSG 64
           ++GL GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G GYG   
Sbjct: 14  LVGL-GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGGRSGGGYGDGS 73

Query: 65  SALGSSGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVG-YGSGGDR 124
           SALG SGYGSGG          RG GYG  G   YG G + GVG    GS   YG G D 
Sbjct: 74  SALGGSGYGSGGV---------RGSGYGNGGGNAYGGGVNSGVGGAGYGSGSRYGGGEDH 133

Query: 125 GVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGERGVGYDN 184
           GVGY    S GY +GG+ G G      +GYGSG     GY+N G+ GYG G +  +GY +
Sbjct: 134 GVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSG-----GYENGGNGGYGQGRDHDIGYGS 193

Query: 185 RGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSRGYGNGNGQAGGA 244
           R     GNG   G G+  GNGYG    +G G    G  G G   G   G G+G G  GG 
Sbjct: 194 RN----GNGNGNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAG-GSGIGAGGGY 253

Query: 245 YGNGNGS---AGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY 283
            G+  GS   AG AYG SG AHGGEHDN+KGSG EGG DGGY
Sbjct: 254 GGHAGGSGIGAGGAYG-SGGAHGGEHDNSKGSG-EGGYDGGY 273

[Close]

BLAST of Sed0002801 vs. ExPASy TrEMBL
Match: A0A6J1E6E4 (glycine-rich protein DOT1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431202 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.3e-29
Identity = 143/284 (50.35%), Postives = 163/284 (57.39%), Query Frame = 0


Query: 5   VIGLGGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSG 64
           ++GL GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G GYG   
Sbjct: 14  LVGL-GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGGRSGGGYGDGS 73

Query: 65  SALGSSGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVGYGSGGDRG 124
           SALG SGYGSGG          RG GYG  G   YG G + GV     G  GYGSG   G
Sbjct: 74  SALGGSGYGSGGV---------RGSGYGNGGGNAYGGGVNSGV-----GGAGYGSGSRYG 133

Query: 125 VGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVG---YDNRGSVGYGSGGERGVGY 184
            G D+    G G  G R  GY+N G+ GYG G D  +G   Y+N G+ GYG G +  +GY
Sbjct: 134 GGEDH----GVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSYENGGNGGYGQGRDHDIGY 193

Query: 185 DNRGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSRGYGNGNGQAG 244
            +R     GNG   G G+  GNGYG    +G G    G  G G   G   G G+G G  G
Sbjct: 194 GSRN----GNGNGNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAG-GSGIGAGG 253

Query: 245 GAYGNGNGS---AGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY 283
           G  G+  GS   AG AYG SG AHGGEHDN+KGSG EGG DGGY
Sbjct: 254 GYGGHAGGSGIGAGGAYG-SGGAHGGEHDNSKGSG-EGGYDGGY 271

[Close]

BLAST of Sed0002801 vs. ExPASy TrEMBL
Match: A0A6J1E700 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111431185 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.0e-29
Identity = 147/284 (51.76%), Postives = 165/284 (58.10%), Query Frame = 0


Query: 5   VIGLGGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSG 64
           ++GL GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G GYG   
Sbjct: 14  LVGL-GLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGGRSGGGYGDGS 73

Query: 65  SALGSSGYGSGGSAGYGGSQGGRGDGYGKDGRGGYGSGGDRGVGYDNRGSVGYGSGGDRG 124
           SALG SGYGSGG          RG GYG  G   YG G   GV     G  GYGSG   G
Sbjct: 74  SALGGSGYGSGGV---------RGSGYGNGGGNAYGGGVSSGV-----GGAGYGSGSRYG 133

Query: 125 VGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGERGVGYDNR 184
            G D+    G G  G R  GY+N G+ GYG G D  +GY +R     G+G   G GY + 
Sbjct: 134 GGEDH----GVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRN----GNGNGNGNGYGD- 193

Query: 185 GSVGYGNGG--SGGYGSEKGNGYGQRGDHGVGYDSRGS-VGSGSDYGNSRGYGNGNGQAG 244
            S GYGNGG   GGYG         RGD GVG  + GS +G+G  YG   G G+G G  G
Sbjct: 194 -SHGYGNGGGVDGGYG---------RGD-GVGSHAGGSGIGAGGGYGGHAG-GSGIGAGG 253

Query: 245 GAYGNGNGS---AGTAYGSSGSAHGGEHDNNKGSGEEGGSDGGY 283
           G  G+  GS   AG AYG SG  HGGEHDN+KGSGEEGG DGGY
Sbjct: 254 GYGGHAGGSGIGAGGAYG-SGGGHGGEHDNSKGSGEEGGYDGGY 260

[Close]

BLAST of Sed0002801 vs. TAIR 10
Match: AT2G36120.1 (Glycine-rich protein family )

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-07
Identity = 92/222 (41.44%), Postives = 105/222 (47.30%), Query Frame = 0


Query: 53  GGSAGRGYGVSGSALGSSGYGSGGSAGYGGSQGGRGDGY-GKDGRGGYGSGGDRGVGYDN 112
           G SAG G G+ G   G SGY  GG +G GG  GG G+G+ G  G GG+G G   G G   
Sbjct: 43  GLSAGLGVGIGGGPGGGSGY--GGGSGEGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGP 102

Query: 113 RGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGY 172
            G  G GSG   G GY    + G+G GG  G      G  G G GG  G GY      G 
Sbjct: 103 GGGYGGGSGEGGGAGYGGGEAGGHGGGGGGGA-----GGGGGGGGGAHGGGY------GG 162

Query: 173 GSGGERGVGYDNRGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSR 232
           G G   G GY   G+ G+G GG GG G   G G G+ G HG GY + G  G G   G   
Sbjct: 163 GQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEGGAHGGGYGAGGGAGEGYGGGAGA 222

Query: 233 GYGNGNGQAGGAYGNGNGSAGTAYGSSGSAHGGEHDNNKGSG 274
           G   G G  GG  G G G  G    +SG  HGG     +GSG
Sbjct: 223 GGHGGGGGGGGGSGGGGGGGGGYAAASGYGHGGGAGGGEGSG 251

[Close]

BLAST of Sed0002801 vs. TAIR 10
Match: AT5G46730.1 (glycine-rich protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.3e-04
Identity = 104/286 (36.36%), Postives = 126/286 (44.06%), Query Frame = 0


Query: 5   VIGLGGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSG 64
           ++G+    + +R+LL Y   +    +      G      +   +   YGG +G G G  G
Sbjct: 14  ILGVSICYATSRNLLNYGQASGGGGHGGGGGSGGVSSGGYGGESGGGYGGGSGEGAG--G 73

Query: 65  SALGSSGYGSGGSAGYGG------SQGGRGDGYGKDGRGGYG--SGGDRGVGYDNRGSVG 124
              G+ GY SGG +G+GG      S GG   G G+ G GGYG  +GG  G G    G  G
Sbjct: 74  GYGGAEGYASGGGSGHGGGGGGAASSGGYASGAGEGGGGGYGGAAGGHAGGGGGGSGGGG 133

Query: 125 ---YGSGGDRGVGYDNRGSVGYGSG--GDRGVGYDNRGSVGYGSGGDRGVGYDNRGSVGY 184
              YG+GG+   GY N    G G+G  G  G  Y   G  G G GG    G       G 
Sbjct: 134 GSAYGAGGEHASGYGNGAGEGGGAGASGYGGGAYGGGGGHGGGGGGGSAGGAHGGSGYGG 193

Query: 185 GSGGERGVGYDNRGSVGYGNGGSGGYGSEKGNGYGQRGDHGVGYDSRGSVGSGSDYGNSR 244
           G GG  G G  + G+ GYG GG GG G   G  YG  G HG GY S G  G G   G + 
Sbjct: 194 GEGGGAGGGGSHGGAGGYGGGGGGGSGG--GGAYGGGGAHGGGYGSGGGEGGGYGGGAAG 253

Query: 245 GYGNGNGQAGGAYGNGNGSAGTAYGSSGSAHGGEHDNNKGSGEEGG 278
           GYG G    GG  G G    G   G SG  HGG      G G  GG
Sbjct: 254 GYGGG---GGGGEGGGGSYGGEHGGGSGGGHGG------GGGHGGG 286

The following BLAST results are available for this feature:

BLAST of Sed0002801 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923448.1	2.6e-32	53.41	glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschat...	[more]
XP_022923449.1	2.9e-31	52.67	glycine-rich cell wall structural protein 1.8-like isoform X2 [Cucurbita moschat...	[more]
XP_023552981.1	1.1e-30	52.90	glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]	[more]
XP_023552983.1	1.1e-30	52.90	glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923541.1	3.2e-30	51.06	glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschat...	[more]

BLAST of Sed0002801 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10496	1.5e-09	43.80	Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]
Q9SIH2	3.4e-06	41.44	Glycine-rich protein DOT1 OS=Arabidopsis thaliana OX=3702 GN=DOT1 PE=2 SV=1	[more]

BLAST of Sed0002801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E9N8	1.3e-32	53.41	glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1E6F7	1.4e-31	52.67	glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1E726	1.6e-30	51.06	glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1E6E4	1.3e-29	50.35	glycine-rich protein DOT1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1E700	3.0e-29	51.76	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Sed0002801 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36120.1	2.4e-07	41.44	Glycine-rich protein family	[more]
AT5G46730.1	3.3e-04	36.36	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002801.1	Sed0002801.1	mRNA