Sed0002773 (gene) Chayote v1

Overview


Name	Sed0002773
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG01: 6176275 .. 6177628 (-)
RNA-Seq Expression	Sed0002773
Synteny	Sed0002773

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAGAACAGAAGGGATTTTCTTTATCCTTTAATTTTTTTTTTCTTTCAATTTTTTTCCGGTCAGATCTGAGGCTATGTCTACCGGAACGGCGTCGTATTGGTGTTACCGGTGCAACCGCTTCGTTCGTGCTTGGGCTGAAGACGCCATTACTTGTCCTTACTGCGACGGTGGATTTGTCGAAGCAATCGAAACCGCCCCTTCTGTCCCGCCGACGAATCTCCACCGTCGATTTTCTCCCGCTCTGGATCAAGATCCGGTTCACTCCCCTCGCTTGACCACCCGCCGGAGTCGCCGCAGGCTTGGGGATCGATCCGCTTTTAACCCTGTTGTTGTCCTTCGTGGCTCTACCGATGCCGGCGATGGGGGCGGCGGCGGTGGGGACAGGAGTAGCTTCGATATTTACTACGACGACGGCGCTGGGTCTGGTCTCCGCCCGGTTCCGGCGACGATGTCGGAGTTTCTTATGGGAACTGGGTTCGATCGGTTGCTGGAACAGTTGGCTCAACTGGAGATCAACGGGTTTGGTAGATCTGAAAATCCGCCGGCGTCGAAAGCCGCGGTCGAGTCAATGCCGACGATTGAGATTTCGGAAACTCACGTGGATTCAGATTCGCACTGCGCCGTTTGTAAAGAGGCGTTTGAAATCGGAATCGAAGCCCGAGAAATGCCCTGTAAGCACATATATCATTCCGATTGTATAATCCCTTGGCTTTCGATGAGAAATTCCTGCCCGGTCTGTCGTCACGAGCTGCCGTCCGAACGCGTATCTCCGGCCGGCGGAGTTTCGGATCGGGCTGTCGATGAAGAGACCGTGGGGTTAACGATCTGGAGGCTCCCCGGAGGTGGGTTCGCCGTCGGGAGATTCGCCGGCGGGAGATTGGCCGGGGAGAGAGATCCACCGGCGGTGTACACCGAAATGGACGGCGGATTCAACGGCAACGGAGCTCCGAGAAGGGTCTCGTGGGCTTCGAGAAGGAGCCGGGGAAGGGAGAGCAGAGGAATTGGGCGAACATTTCGCAACATCTTTTCGTTTTTTGGAAGATTGAGATCTTCGAATTCATCTTCTTCCCGGAATGAATCTGAATCTGTTAGTAGAAGCCATAGCCATTCAAGTTCATCAGTTTTCAGCCGATACTTGCGACGGCAAAACAGAACTTGGGTGTTGGAGAACCAGAGTGAAAATGACCGATGGTGATTCTTTTCAATTCCCAAATACAATTTCTCTATGCGTTGTATTCCTTTTTGATCTGTTTACCACATTTATTGAACAATACCTTTACAAATGAAACTAGATTATGTATATACAGCTTTTAACTTGGCAACCCAATGAATGGCTTTTTTGTTTCTGCTCA

mRNA sequence

ACAAGAACAGAAGGGATTTTCTTTATCCTTTAATTTTTTTTTTCTTTCAATTTTTTTCCGGTCAGATCTGAGGCTATGTCTACCGGAACGGCGTCGTATTGGTGTTACCGGTGCAACCGCTTCGTTCGTGCTTGGGCTGAAGACGCCATTACTTGTCCTTACTGCGACGGTGGATTTGTCGAAGCAATCGAAACCGCCCCTTCTGTCCCGCCGACGAATCTCCACCGTCGATTTTCTCCCGCTCTGGATCAAGATCCGGTTCACTCCCCTCGCTTGACCACCCGCCGGAGTCGCCGCAGGCTTGGGGATCGATCCGCTTTTAACCCTGTTGTTGTCCTTCGTGGCTCTACCGATGCCGGCGATGGGGGCGGCGGCGGTGGGGACAGGAGTAGCTTCGATATTTACTACGACGACGGCGCTGGGTCTGGTCTCCGCCCGGTTCCGGCGACGATGTCGGAGTTTCTTATGGGAACTGGGTTCGATCGGTTGCTGGAACAGTTGGCTCAACTGGAGATCAACGGGTTTGGTAGATCTGAAAATCCGCCGGCGTCGAAAGCCGCGGTCGAGTCAATGCCGACGATTGAGATTTCGGAAACTCACGTGGATTCAGATTCGCACTGCGCCGTTTGTAAAGAGGCGTTTGAAATCGGAATCGAAGCCCGAGAAATGCCCTGTAAGCACATATATCATTCCGATTGTATAATCCCTTGGCTTTCGATGAGAAATTCCTGCCCGGTCTGTCGTCACGAGCTGCCGTCCGAACGCGTATCTCCGGCCGGCGGAGTTTCGGATCGGGCTGTCGATGAAGAGACCGTGGGGTTAACGATCTGGAGGCTCCCCGGAGGTGGGTTCGCCGTCGGGAGATTCGCCGGCGGGAGATTGGCCGGGGAGAGAGATCCACCGGCGGTGTACACCGAAATGGACGGCGGATTCAACGGCAACGGAGCTCCGAGAAGGGTCTCGTGGGCTTCGAGAAGGAGCCGGGGAAGGGAGAGCAGAGGAATTGGGCGAACATTTCGCAACATCTTTTCGTTTTTTGGAAGATTGAGATCTTCGAATTCATCTTCTTCCCGGAATGAATCTGAATCTGTTAGTAGAAGCCATAGCCATTCAAGTTCATCAGTTTTCAGCCGATACTTGCGACGGCAAAACAGAACTTGGGTGTTGGAGAACCAGAGTGAAAATGACCGATGGTGATTCTTTTCAATTCCCAAATACAATTTCTCTATGCGTTGTATTCCTTTTTGATCTGTTTACCACATTTATTGAACAATACCTTTACAAATGAAACTAGATTATGTATATACAGCTTTTAACTTGGCAACCCAATGAATGGCTTTTTTGTTTCTGCTCA

Coding sequence (CDS)

ATGTCTACCGGAACGGCGTCGTATTGGTGTTACCGGTGCAACCGCTTCGTTCGTGCTTGGGCTGAAGACGCCATTACTTGTCCTTACTGCGACGGTGGATTTGTCGAAGCAATCGAAACCGCCCCTTCTGTCCCGCCGACGAATCTCCACCGTCGATTTTCTCCCGCTCTGGATCAAGATCCGGTTCACTCCCCTCGCTTGACCACCCGCCGGAGTCGCCGCAGGCTTGGGGATCGATCCGCTTTTAACCCTGTTGTTGTCCTTCGTGGCTCTACCGATGCCGGCGATGGGGGCGGCGGCGGTGGGGACAGGAGTAGCTTCGATATTTACTACGACGACGGCGCTGGGTCTGGTCTCCGCCCGGTTCCGGCGACGATGTCGGAGTTTCTTATGGGAACTGGGTTCGATCGGTTGCTGGAACAGTTGGCTCAACTGGAGATCAACGGGTTTGGTAGATCTGAAAATCCGCCGGCGTCGAAAGCCGCGGTCGAGTCAATGCCGACGATTGAGATTTCGGAAACTCACGTGGATTCAGATTCGCACTGCGCCGTTTGTAAAGAGGCGTTTGAAATCGGAATCGAAGCCCGAGAAATGCCCTGTAAGCACATATATCATTCCGATTGTATAATCCCTTGGCTTTCGATGAGAAATTCCTGCCCGGTCTGTCGTCACGAGCTGCCGTCCGAACGCGTATCTCCGGCCGGCGGAGTTTCGGATCGGGCTGTCGATGAAGAGACCGTGGGGTTAACGATCTGGAGGCTCCCCGGAGGTGGGTTCGCCGTCGGGAGATTCGCCGGCGGGAGATTGGCCGGGGAGAGAGATCCACCGGCGGTGTACACCGAAATGGACGGCGGATTCAACGGCAACGGAGCTCCGAGAAGGGTCTCGTGGGCTTCGAGAAGGAGCCGGGGAAGGGAGAGCAGAGGAATTGGGCGAACATTTCGCAACATCTTTTCGTTTTTTGGAAGATTGAGATCTTCGAATTCATCTTCTTCCCGGAATGAATCTGAATCTGTTAGTAGAAGCCATAGCCATTCAAGTTCATCAGTTTTCAGCCGATACTTGCGACGGCAAAACAGAACTTGGGTGTTGGAGAACCAGAGTGAAAATGACCGATGGTGA

Protein sequence

MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPALDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHVDSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGVSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVSWASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSSRNESESVSRSHSHSSSSVFSRYLRRQNRTWVLENQSENDRW

Homology

[Close]

BLAST of Sed0002773 vs. NCBI nr
Match: XP_004143127.2 (E3 ubiquitin-protein ligase RDUF1, partial [Cucumis sativus])

HSP 1 Score: 680.2 bits (1754), Expect = 9.7e-192
Identity = 342/379 (90.24%), Postives = 355/379 (93.67%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPA---- 60
           MSTGTASYWCYRCNRFVRAWA+D+ITCPYCDGGFVEAIETA S+PP+NLHRR SP+    
Sbjct: 37  MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 96

Query: 61  LDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAG 120
           LDQD   SPRL+TRRSRRRLGDRS FNPVVVLRGS DAGD   GGG+R+SFDIYYDDGAG
Sbjct: 97  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGD-VVGGGERNSFDIYYDDGAG 156

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEI E+HV
Sbjct: 157 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 216

Query: 181 DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIG EAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 217 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGG 276

Query: 241 VSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVS 300
           VSDR VDEETVGLTIWRLPGGGFAVGRF+GGRLAGERDPPAVYTEMDGGFNGNG PRRVS
Sbjct: 277 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVS 336

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSS--RNESESVSRSHSHSSSSVFSRY 360
           WASRRSRGRESRGIGRTFRNIFSFFGR RSS+SSSS   NESESVSRSHSHSSSSVFSRY
Sbjct: 337 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 396

Query: 361 LRRQNRTWVLENQSENDRW 374
           LRRQNR WVLENQ+EN RW
Sbjct: 397 LRRQNRAWVLENQNENGRW 414

[Close]

BLAST of Sed0002773 vs. NCBI nr
Match: KAE8646961.1 (hypothetical protein Csa_020907 [Cucumis sativus])

HSP 1 Score: 680.2 bits (1754), Expect = 9.7e-192
Identity = 342/379 (90.24%), Postives = 355/379 (93.67%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPA---- 60
           MSTGTASYWCYRCNRFVRAWA+D+ITCPYCDGGFVEAIETA S+PP+NLHRR SP+    
Sbjct: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 60

Query: 61  LDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAG 120
           LDQD   SPRL+TRRSRRRLGDRS FNPVVVLRGS DAGD   GGG+R+SFDIYYDDGAG
Sbjct: 61  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGD-VVGGGERNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEI E+HV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIG EAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVS 300
           VSDR VDEETVGLTIWRLPGGGFAVGRF+GGRLAGERDPPAVYTEMDGGFNGNG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSS--RNESESVSRSHSHSSSSVFSRY 360
           WASRRSRGRESRGIGRTFRNIFSFFGR RSS+SSSS   NESESVSRSHSHSSSSVFSRY
Sbjct: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 360

Query: 361 LRRQNRTWVLENQSENDRW 374
           LRRQNR WVLENQ+EN RW
Sbjct: 361 LRRQNRAWVLENQNENGRW 378

[Close]

BLAST of Sed0002773 vs. NCBI nr
Match: XP_038902866.1 (E3 ubiquitin-protein ligase RDUF1 [Benincasa hispida])

HSP 1 Score: 671.0 bits (1730), Expect = 5.9e-189
Identity = 339/379 (89.45%), Postives = 350/379 (92.35%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPA---- 60
           MS+GTASYWCYRCNRFVRAWA+D+ITCPYCDGGFVEAIETA S+P  NLHRRFSP+    
Sbjct: 1   MSSGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAANLHRRFSPSTIHT 60

Query: 61  LDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAG 120
           LDQD   SPRL+TRRSRRRLGDRS FNPVVVLRGS D GD   GGG+R+SFDIYYDDGAG
Sbjct: 61  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGD-VVGGGERNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEI E+HV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIG EAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAG 
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGS 240

Query: 241 VSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVS 300
           VSDR VDEETVGLTIWRLPGGGFAVGRFAGGRLAGERD PAVYTEMDGGFN NGAPRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDTPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSS--RNESESVSRSHSHSSSSVFSRY 360
           WASRRSRGRESRGIGRTFRNIFSFFGR RSS SSSS   N+SESVSRSHSHSSSSVFSRY
Sbjct: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSTSSSSSPSNDSESVSRSHSHSSSSVFSRY 360

Query: 361 LRRQNRTWVLENQSENDRW 374
           LRRQNR WVLENQ+EN RW
Sbjct: 361 LRRQNRAWVLENQNENGRW 378

[Close]

BLAST of Sed0002773 vs. NCBI nr
Match: XP_022947282.1 (E3 ubiquitin-protein ligase RDUF2-like [Cucurbita moschata] >KAG6605446.1 E3 ubiquitin-protein ligase RDUF1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035394.1 E3 ubiquitin-protein ligase RDUF1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 670.6 bits (1729), Expect = 7.7e-189
Identity = 336/379 (88.65%), Postives = 349/379 (92.08%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPA---- 60
           M++GTASYWCYRCNRFVRAW +D I+CPYCDGGFVEAIETA S+P  NLHRRFSP+    
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAG 120
           LDQDP  SPRL+TRRSRRRLGDRS FNPVVVLRGS D GD GGGGG+ +SFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEI E+HV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIG EAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVS 300
           VSDR VDEETVGLTIWRLPGGGFAVGRF GGRL GERDPPAVYTEMDGGFN NGAPRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSS--RNESESVSRSHSHSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGRLRSSNSSSS   NE+ESVSRSHS SSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRQNRTWVLENQSENDRW 374
           LRR NRTW LEN +EN RW
Sbjct: 361 LRRPNRTW-LENHTENGRW 378

[Close]

BLAST of Sed0002773 vs. NCBI nr
Match: XP_008464108.1 (PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo] >KAA0061885.1 E3 ubiquitin-protein ligase RING1 [Cucumis melo var. makuwa] >TYK15372.1 E3 ubiquitin-protein ligase RING1 [Cucumis melo var. makuwa])

HSP 1 Score: 670.6 bits (1729), Expect = 7.7e-189
Identity = 338/379 (89.18%), Postives = 350/379 (92.35%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSP----A 60
           MSTGTASYWCYRC+RFVRAWA+D+ITCPYCDGGFVEAIETA S+P  NLHRR SP     
Sbjct: 1   MSTGTASYWCYRCSRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPTAIHT 60

Query: 61  LDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAG 120
           +DQD   SPRL+TRRSRRR GDRS FNPVVVLRGS DAGD   GGG+R+SFDIYYDDGAG
Sbjct: 61  VDQDSFQSPRLSTRRSRRRFGDRSTFNPVVVLRGSADAGD-VVGGGERNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEI E+HV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIG EAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVS 300
           VSDR VDEETVGLTIWRLPGGGFAVGRF+GGRLAGERDPPAVYTEMDGGFN NG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSS--RNESESVSRSHSHSSSSVFSRY 360
           WASRRSRGRESRGIGRTFRNIFSFFGR RSS+SSSS   NESESVSRSHSHSSSSVFSRY
Sbjct: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 360

Query: 361 LRRQNRTWVLENQSENDRW 374
           LRRQNR WVLENQ+EN RW
Sbjct: 361 LRRQNRAWVLENQNENGRW 378

[Close]

BLAST of Sed0002773 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.6e-86
Identity = 190/396 (47.98%), Postives = 246/396 (62.12%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWAED------AITCPYCDGGFVEAIETAPSVPPTNLHRRFSPALD 64
           TASYWCY C RFV  WA+       ++ CP+CDGGF+E I  + S   T L      + +
Sbjct: 15  TASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSA-ATEL--TIPASTE 74

Query: 65  QDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGST---DAGDGGGGGGDRSSFDIYYDDGA 124
              +++ R +  R RRR G R +FNPV+VL+G     + G+ G    DR +F+ YYDDG+
Sbjct: 75  VRSINNNRRSVIR-RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGS 134

Query: 125 GSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN--GFGRSENPPASKAAVESMPTIEISE 184
           GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E +  G GRS NPPASK+A+ES+P +EIS+
Sbjct: 135 GSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISD 194

Query: 185 THVDSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSP 244
            H+ S+++CAVC E FE   EAREMPCKH++H DCI+PWLS+RNSCPVCR ELPSE    
Sbjct: 195 CHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSE---- 254

Query: 245 AGGVSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNG--A 304
               S+   ++  VG+TIWRLPGGGFAVGRF      GER  P V TEMDGG  GN    
Sbjct: 255 PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDG 314

Query: 305 PRRVSWASRRSRG---RESRGIG----------RTFRNIFSFFGRLRSSNSSSSRNESES 364
           PRR+SW   RS G    +S G G          R  R + S   R+R + SSSS + + S
Sbjct: 315 PRRISWV--RSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSSSAAIS 374

Query: 365 VSRSHSHSSSSVFSRYLRRQN---RTWVLENQSEND 372
            S  +   +  V SR L R N   R +   N+S  D
Sbjct: 375 TSSDNLDLNIEVESRVLDRSNSVMRRYFRRNRSNRD 400

[Close]

BLAST of Sed0002773 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 9.8e-86
Identity = 177/377 (46.95%), Postives = 232/377 (61.54%), Query Frame = 0


Query: 2   STGTASYWCYRCNRFVRAW----AEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPAL 61
           +T T SYWCY C RF+  W    A   + CPYC+GGF+E IE + +     +        
Sbjct: 25  TTLTTSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPASTPEVR 84

Query: 62  DQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAG--------DGGGGGGDRSSFDI 121
             +  H   +  RRS R    R++FNPV+VL G    G        +G G   +R +++ 
Sbjct: 85  SVEETHRSIIRRRRSNR----RTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEF 144

Query: 122 YYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEI--NGFGRSENPPASKAAVESMP 181
           YYDDG+GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E   NG GRS NPPASK+A+ES+P
Sbjct: 145 YYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLP 204

Query: 182 TIEISETHVDSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELP 241
            +EIS+ H  ++++CAVC E FE GIE REMPCKHI+H DCI+PWLS+RNSCPVCR ELP
Sbjct: 205 RVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELP 264

Query: 242 SERVSPAGGVSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMD-GGF 301
           S+ +  +        +E  VG+TIWRLPGGGFAVGRF  G   GER  P V TEMD GG 
Sbjct: 265 SDPIQRSN------EEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGL 324

Query: 302 NGNGAPRRVSWA-------SRRSRGRESRG--IGRTFRNIFSFFGRLRSSNSSSSRN--- 351
             N  PRR+SW          R+ GR   G  + R  R + SF  R+R S  SS+ N   
Sbjct: 325 GSNEGPRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVID 384

[Close]

BLAST of Sed0002773 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 6.1e-80
Identity = 188/403 (46.65%), Postives = 236/403 (58.56%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPP--------TNLHR---RF 64
           + SYWCY C+RFV  W  D+I+CP CDGGF+E I+      P        T  HR   RF
Sbjct: 3   SGSYWCYSCSRFV--WVSDSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRF 62

Query: 65  SP----------ALDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDA--GDGGGGG 124
            P          ++  D   +P + TR    R     + NPV+VLRGS  A   D    G
Sbjct: 63  PPPSSSSSTPSASMHADNSPTPTIVTRTRSNR-----SPNPVIVLRGSAAAPSSDVVSEG 122

Query: 125 GDRSSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN---GFGRSENPPA 184
            DRS+F +YYDDG  SGLRP+P +M+EFL+G+GFDRLL+Q++Q+E+N        E+PPA
Sbjct: 123 LDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPA 182

Query: 185 SKAAVESMPTIEISETHV--DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMR 244
           SK+A+E++P IEI  TH+  DS SHCAVCKE F +   AREMPC HIYH DCI+PWL++R
Sbjct: 183 SKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIR 242

Query: 245 NSCPVCRHELPSERVSPAGGVSDRAV-------DEETVGLTIWRLPGGGFAVGRFAGGRL 304
           NSCPVCRHELP+E ++   G +  AV       ++   GLTIWRLPGGGFAVGR  GG  
Sbjct: 243 NSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWR 302

Query: 305 AGERDPPAVYTEMDGGFNGN-GAPRRVSWASRR-------SRGRESRGIGRTFRNIFSFF 360
            G+R  P VYTE+DGG  G+   PRRV+W SRR       SR R     GR  R    F 
Sbjct: 303 GGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFS 362

[Close]

BLAST of Sed0002773 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.7e-37
Identity = 96/243 (39.51%), Postives = 135/243 (55.56%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPALDQD 60
           MS+   ++WC+RC R V   A DA+ C YC GGFVE I+  PS    ++ R   P  D  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVER--DPTFDLM 60

Query: 61  PVHSPRLTTRRSRR--------RLGDR-----SAFNPVVVLRGSTDAGDGGGGGGDRSSF 120
              S  + +R + R        RLG       S   P+++  G          GGD SS 
Sbjct: 61  EAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPF---RLAGGDNSSV 120

Query: 121 DIYYDDGAGSGLRPVPAT-MSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESM 180
           + +  +GA  G+     T   ++  G G + L+EQL+    +G      PPA K++++++
Sbjct: 121 EAFV-NGAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDAL 180

Query: 181 PTIEISETHV-DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHE 229
           PTI+I++ H+  SDSHC VCK+ FE+  EA++MPC HIYHSDCI+PWL   NSCPVCR E
Sbjct: 181 PTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKE 232

[Close]

BLAST of Sed0002773 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.9e-31
Identity = 111/363 (30.58%), Postives = 158/363 (43.53%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPALDQD 60
           MS+   ++WC+RC R VR   ++ + C YC GGFVE ++ A    P ++ R     +++D
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPV-CFYCGGGFVEELDMA-QASPFDMFRSHRGVVERD 60

Query: 61  PVHS----------PRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIY 120
                          RL  R   R +  R+  +      G       GG    R + D  
Sbjct: 61  QTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNA 120

Query: 121 YD---DGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMP 180
            +   +G   G+        ++  G G + L EQL+     G  R   PPA ++A++++P
Sbjct: 121 VEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAIDALP 180

Query: 181 TIEISETHV-DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHEL 240
           TI+I++ H+  SDS+C VCK+ FE+G EA++MPC HIYHSDCI+PWL   NSCPVCR EL
Sbjct: 181 TIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 240

Query: 241 PSERVSPAGGVSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGF 300
           PS     A G S                                                
Sbjct: 241 PS-----ASGPSSS---------------------------------------------- 300

Query: 301 NGNGAPRRVSWASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSSRNESESVSRSHSHS 350
                P R   +S  S    SR  G   RN FS F   RSS SSSS  ++   +R+   S
Sbjct: 301 QNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRNSDTS 306

[Close]

BLAST of Sed0002773 vs. ExPASy TrEMBL
Match: A0A0A0KE74 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G190250 PE=4 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 4.7e-192
Identity = 342/379 (90.24%), Postives = 355/379 (93.67%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPA---- 60
           MSTGTASYWCYRCNRFVRAWA+D+ITCPYCDGGFVEAIETA S+PP+NLHRR SP+    
Sbjct: 39  MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 98

Query: 61  LDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAG 120
           LDQD   SPRL+TRRSRRRLGDRS FNPVVVLRGS DAGD   GGG+R+SFDIYYDDGAG
Sbjct: 99  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGD-VVGGGERNSFDIYYDDGAG 158

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEI E+HV
Sbjct: 159 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 218

Query: 181 DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIG EAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 219 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGG 278

Query: 241 VSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVS 300
           VSDR VDEETVGLTIWRLPGGGFAVGRF+GGRLAGERDPPAVYTEMDGGFNGNG PRRVS
Sbjct: 279 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVS 338

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSS--RNESESVSRSHSHSSSSVFSRY 360
           WASRRSRGRESRGIGRTFRNIFSFFGR RSS+SSSS   NESESVSRSHSHSSSSVFSRY
Sbjct: 339 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 398

Query: 361 LRRQNRTWVLENQSENDRW 374
           LRRQNR WVLENQ+EN RW
Sbjct: 399 LRRQNRAWVLENQNENGRW 416

[Close]

BLAST of Sed0002773 vs. ExPASy TrEMBL
Match: A0A5A7V7N5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00040 PE=4 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 3.7e-189
Identity = 338/379 (89.18%), Postives = 350/379 (92.35%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSP----A 60
           MSTGTASYWCYRC+RFVRAWA+D+ITCPYCDGGFVEAIETA S+P  NLHRR SP     
Sbjct: 1   MSTGTASYWCYRCSRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPTAIHT 60

Query: 61  LDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAG 120
           +DQD   SPRL+TRRSRRR GDRS FNPVVVLRGS DAGD   GGG+R+SFDIYYDDGAG
Sbjct: 61  VDQDSFQSPRLSTRRSRRRFGDRSTFNPVVVLRGSADAGD-VVGGGERNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEI E+HV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIG EAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVS 300
           VSDR VDEETVGLTIWRLPGGGFAVGRF+GGRLAGERDPPAVYTEMDGGFN NG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSS--RNESESVSRSHSHSSSSVFSRY 360
           WASRRSRGRESRGIGRTFRNIFSFFGR RSS+SSSS   NESESVSRSHSHSSSSVFSRY
Sbjct: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 360

Query: 361 LRRQNRTWVLENQSENDRW 374
           LRRQNR WVLENQ+EN RW
Sbjct: 361 LRRQNRAWVLENQNENGRW 378

[Close]

BLAST of Sed0002773 vs. ExPASy TrEMBL
Match: A0A6J1G610 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111451192 PE=4 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 3.7e-189
Identity = 336/379 (88.65%), Postives = 349/379 (92.08%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPA---- 60
           M++GTASYWCYRCNRFVRAW +D I+CPYCDGGFVEAIETA S+P  NLHRRFSP+    
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAG 120
           LDQDP  SPRL+TRRSRRRLGDRS FNPVVVLRGS D GD GGGGG+ +SFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEI E+HV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIG EAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVS 300
           VSDR VDEETVGLTIWRLPGGGFAVGRF GGRL GERDPPAVYTEMDGGFN NGAPRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSS--RNESESVSRSHSHSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGRLRSSNSSSS   NE+ESVSRSHS SSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRQNRTWVLENQSENDRW 374
           LRR NRTW LEN +EN RW
Sbjct: 361 LRRPNRTW-LENHTENGRW 378

[Close]

BLAST of Sed0002773 vs. ExPASy TrEMBL
Match: A0A1S3CKQ2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103502070 PE=4 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 3.7e-189
Identity = 338/379 (89.18%), Postives = 350/379 (92.35%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSP----A 60
           MSTGTASYWCYRC+RFVRAWA+D+ITCPYCDGGFVEAIETA S+P  NLHRR SP     
Sbjct: 1   MSTGTASYWCYRCSRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPTAIHT 60

Query: 61  LDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAG 120
           +DQD   SPRL+TRRSRRR GDRS FNPVVVLRGS DAGD   GGG+R+SFDIYYDDGAG
Sbjct: 61  VDQDSFQSPRLSTRRSRRRFGDRSTFNPVVVLRGSADAGD-VVGGGERNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEI E+HV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIG EAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVS 300
           VSDR VDEETVGLTIWRLPGGGFAVGRF+GGRLAGERDPPAVYTEMDGGFN NG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSS--RNESESVSRSHSHSSSSVFSRY 360
           WASRRSRGRESRGIGRTFRNIFSFFGR RSS+SSSS   NESESVSRSHSHSSSSVFSRY
Sbjct: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 360

Query: 361 LRRQNRTWVLENQSENDRW 374
           LRRQNR WVLENQ+EN RW
Sbjct: 361 LRRQNRAWVLENQNENGRW 378

[Close]

BLAST of Sed0002773 vs. ExPASy TrEMBL
Match: A0A6J1L6T2 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499706 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 7.0e-188
Identity = 334/379 (88.13%), Postives = 347/379 (91.56%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPA---- 60
           M++GTASYWCYRCNRFVRAW +D I+CPYCDGGFVEAIETA S+P  NLHRRFSP+    
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAGDGGGGGGDRSSFDIYYDDGAG 120
           LDQDP  SPRL+TRRSRRRLGDRS FNPVVVLRGS D GD GGGGG+ +SFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEISETHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEI E+HV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAF IG EAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFVIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNGAPRRVS 300
           VSDR VDEETVGLTIWRLPGGGFAVGRF GGRL GERDPPAVYTEMDGGFN NG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSS--RNESESVSRSHSHSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGRLRSSNSSSS   NE+ESVSRSHS SSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRQNRTWVLENQSENDRW 374
           LRR NRTW LEN +EN RW
Sbjct: 361 LRRPNRTW-LENHTENGRW 378

[Close]

BLAST of Sed0002773 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 320.5 bits (820), Expect = 1.8e-87
Identity = 190/396 (47.98%), Postives = 246/396 (62.12%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWAED------AITCPYCDGGFVEAIETAPSVPPTNLHRRFSPALD 64
           TASYWCY C RFV  WA+       ++ CP+CDGGF+E I  + S   T L      + +
Sbjct: 15  TASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSA-ATEL--TIPASTE 74

Query: 65  QDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGST---DAGDGGGGGGDRSSFDIYYDDGA 124
              +++ R +  R RRR G R +FNPV+VL+G     + G+ G    DR +F+ YYDDG+
Sbjct: 75  VRSINNNRRSVIR-RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGS 134

Query: 125 GSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN--GFGRSENPPASKAAVESMPTIEISE 184
           GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E +  G GRS NPPASK+A+ES+P +EIS+
Sbjct: 135 GSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISD 194

Query: 185 THVDSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSP 244
            H+ S+++CAVC E FE   EAREMPCKH++H DCI+PWLS+RNSCPVCR ELPSE    
Sbjct: 195 CHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSE---- 254

Query: 245 AGGVSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMDGGFNGNG--A 304
               S+   ++  VG+TIWRLPGGGFAVGRF      GER  P V TEMDGG  GN    
Sbjct: 255 PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDG 314

Query: 305 PRRVSWASRRSRG---RESRGIG----------RTFRNIFSFFGRLRSSNSSSSRNESES 364
           PRR+SW   RS G    +S G G          R  R + S   R+R + SSSS + + S
Sbjct: 315 PRRISWV--RSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSSSAAIS 374

Query: 365 VSRSHSHSSSSVFSRYLRRQN---RTWVLENQSEND 372
            S  +   +  V SR L R N   R +   N+S  D
Sbjct: 375 TSSDNLDLNIEVESRVLDRSNSVMRRYFRRNRSNRD 400

[Close]

BLAST of Sed0002773 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 318.5 bits (815), Expect = 6.9e-87
Identity = 177/377 (46.95%), Postives = 232/377 (61.54%), Query Frame = 0


Query: 2   STGTASYWCYRCNRFVRAW----AEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPAL 61
           +T T SYWCY C RF+  W    A   + CPYC+GGF+E IE + +     +        
Sbjct: 25  TTLTTSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPASTPEVR 84

Query: 62  DQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDAG--------DGGGGGGDRSSFDI 121
             +  H   +  RRS R    R++FNPV+VL G    G        +G G   +R +++ 
Sbjct: 85  SVEETHRSIIRRRRSNR----RTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEF 144

Query: 122 YYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEI--NGFGRSENPPASKAAVESMP 181
           YYDDG+GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E   NG GRS NPPASK+A+ES+P
Sbjct: 145 YYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLP 204

Query: 182 TIEISETHVDSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELP 241
            +EIS+ H  ++++CAVC E FE GIE REMPCKHI+H DCI+PWLS+RNSCPVCR ELP
Sbjct: 205 RVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELP 264

Query: 242 SERVSPAGGVSDRAVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDPPAVYTEMD-GGF 301
           S+ +  +        +E  VG+TIWRLPGGGFAVGRF  G   GER  P V TEMD GG 
Sbjct: 265 SDPIQRSN------EEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGL 324

Query: 302 NGNGAPRRVSWA-------SRRSRGRESRG--IGRTFRNIFSFFGRLRSSNSSSSRN--- 351
             N  PRR+SW          R+ GR   G  + R  R + SF  R+R S  SS+ N   
Sbjct: 325 GSNEGPRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVID 384

[Close]

BLAST of Sed0002773 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 299.3 bits (765), Expect = 4.4e-81
Identity = 188/403 (46.65%), Postives = 236/403 (58.56%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPP--------TNLHR---RF 64
           + SYWCY C+RFV  W  D+I+CP CDGGF+E I+      P        T  HR   RF
Sbjct: 3   SGSYWCYSCSRFV--WVSDSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRF 62

Query: 65  SP----------ALDQDPVHSPRLTTRRSRRRLGDRSAFNPVVVLRGSTDA--GDGGGGG 124
            P          ++  D   +P + TR    R     + NPV+VLRGS  A   D    G
Sbjct: 63  PPPSSSSSTPSASMHADNSPTPTIVTRTRSNR-----SPNPVIVLRGSAAAPSSDVVSEG 122

Query: 125 GDRSSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN---GFGRSENPPA 184
            DRS+F +YYDDG  SGLRP+P +M+EFL+G+GFDRLL+Q++Q+E+N        E+PPA
Sbjct: 123 LDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPA 182

Query: 185 SKAAVESMPTIEISETHV--DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMR 244
           SK+A+E++P IEI  TH+  DS SHCAVCKE F +   AREMPC HIYH DCI+PWL++R
Sbjct: 183 SKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIR 242

Query: 245 NSCPVCRHELPSERVSPAGGVSDRAV-------DEETVGLTIWRLPGGGFAVGRFAGGRL 304
           NSCPVCRHELP+E ++   G +  AV       ++   GLTIWRLPGGGFAVGR  GG  
Sbjct: 243 NSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWR 302

Query: 305 AGERDPPAVYTEMDGGFNGN-GAPRRVSWASRR-------SRGRESRGIGRTFRNIFSFF 360
            G+R  P VYTE+DGG  G+   PRRV+W SRR       SR R     GR  R    F 
Sbjct: 303 GGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFS 362

[Close]

BLAST of Sed0002773 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-38
Identity = 96/243 (39.51%), Postives = 135/243 (55.56%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPALDQD 60
           MS+   ++WC+RC R V   A DA+ C YC GGFVE I+  PS    ++ R   P  D  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVER--DPTFDLM 60

Query: 61  PVHSPRLTTRRSRR--------RLGDR-----SAFNPVVVLRGSTDAGDGGGGGGDRSSF 120
              S  + +R + R        RLG       S   P+++  G          GGD SS 
Sbjct: 61  EAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPF---RLAGGDNSSV 120

Query: 121 DIYYDDGAGSGLRPVPAT-MSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESM 180
           + +  +GA  G+     T   ++  G G + L+EQL+    +G      PPA K++++++
Sbjct: 121 EAFV-NGAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDAL 180

Query: 181 PTIEISETHV-DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHE 229
           PTI+I++ H+  SDSHC VCK+ FE+  EA++MPC HIYHSDCI+PWL   NSCPVCR E
Sbjct: 181 PTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKE 232

[Close]

BLAST of Sed0002773 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-38
Identity = 96/243 (39.51%), Postives = 135/243 (55.56%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAEDAITCPYCDGGFVEAIETAPSVPPTNLHRRFSPALDQD 60
           MS+   ++WC+RC R V   A DA+ C YC GGFVE I+  PS    ++ R   P  D  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVER--DPTFDLM 60

Query: 61  PVHSPRLTTRRSRR--------RLGDR-----SAFNPVVVLRGSTDAGDGGGGGGDRSSF 120
              S  + +R + R        RLG       S   P+++  G          GGD SS 
Sbjct: 61  EAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPF---RLAGGDNSSV 120

Query: 121 DIYYDDGAGSGLRPVPAT-MSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESM 180
           + +  +GA  G+     T   ++  G G + L+EQL+    +G      PPA K++++++
Sbjct: 121 EAFV-NGAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDAL 180

Query: 181 PTIEISETHV-DSDSHCAVCKEAFEIGIEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHE 229
           PTI+I++ H+  SDSHC VCK+ FE+  EA++MPC HIYHSDCI+PWL   NSCPVCR E
Sbjct: 181 PTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKE 232

The following BLAST results are available for this feature:

BLAST of Sed0002773 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143127.2	9.7e-192	90.24	E3 ubiquitin-protein ligase RDUF1, partial [Cucumis sativus]	[more]
KAE8646961.1	9.7e-192	90.24	hypothetical protein Csa_020907 [Cucumis sativus]	[more]
XP_038902866.1	5.9e-189	89.45	E3 ubiquitin-protein ligase RDUF1 [Benincasa hispida]	[more]
XP_022947282.1	7.7e-189	88.65	E3 ubiquitin-protein ligase RDUF2-like [Cucurbita moschata] >KAG6605446.1 E3 ubi...	[more]
XP_008464108.1	7.7e-189	89.18	PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo] >KAA0061885.1 E3 ubi...	[more]

BLAST of Sed0002773 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940T5	2.6e-86	47.98	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q9SNB6	9.8e-86	46.95	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
O22283	6.1e-80	46.65	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	1.7e-37	39.51	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
O22197	6.9e-31	30.58	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of Sed0002773 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE74	4.7e-192	90.24	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G190250 PE...	[more]
A0A5A7V7N5	3.7e-189	89.18	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1G610	3.7e-189	88.65	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111451192...	[more]
A0A1S3CKQ2	3.7e-189	89.18	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103502070 PE=4 ...	[more]
A0A6J1L6T2	7.0e-188	88.13	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499706 P...	[more]

BLAST of Sed0002773 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59550.1	1.8e-87	47.98	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G46620.1	6.9e-87	46.95	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G39720.1	4.4e-81	46.65	RING-H2 finger C2A	[more]
AT3G56580.2	1.2e-38	39.51	RING/U-box superfamily protein	[more]
AT3G56580.1	1.2e-38	39.51	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 182..222 e-value: 5.6E-7 score: 39.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 181..223 e-value: 2.7E-10 score: 40.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 182..223 score: 12.135206
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 148..229 e-value: 2.8E-21 score: 77.0
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 7..38 e-value: 5.1E-14 score: 52.3
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 247..356 e-value: 9.7E-41 score: 138.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..344
None	No IPR available	PANTHER	PTHR15710:SF24	OS05G0110000 PROTEIN	coord: 4..311
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 4..311
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 182..223 e-value: 6.3752E-24 score: 90.84
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 162..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002773.1	Sed0002773.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0046873	metal ion transmembrane transporter activity
molecular_function	GO:0061630	ubiquitin protein ligase activity