Sed0002634 (gene) Chayote v1

Overview
NameSed0002634
Typegene
OrganismSechium edule (Chayote v1)
Descriptioncytochrome c oxidase subunit 6b-1-like
LocationLG04: 1084231 .. 1086722 (+)
RNA-Seq ExpressionSed0002634
SyntenySed0002634
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCATCGGAACCAGTGTGTGGTTAATCTAACCTAACCATCGAGTTAGTGTTTTCATCTCTTTCGTTTACCCTTTTCTGCCGCATCTGAAATCCATTCGTTTTTTCTGTAGCTGCAAAGAAACCCGATCGCTTCTTCTTCCATCCATGGCGGAATCGCAGAGCGAAAAAGTCCCTTCTCTAGCTGAGGTAATTTTTTTTTACAGCTTTAACAATCTGGAATTTCGATTCGAAACCTAAATCTTTGTTGTGGTTTCGTCCTTTTTTGTAATTTTTTTTTTCATGGGTTGTGTATTTTAGTTGGTCAATTTACGATTGCTTGTGATAGATCGGTTGTTATTTGGTTAGGAATCCATTGATTATATGTGTTTTTTTTTTTGTTATAATTTTGTCCATTTTTTAGGGATTAATTGAGGTCATTTGGTTTTCCTGGATAAGACCCCCTGGTTTCATATGAATTAGCAGTGAGTTTTTATGGCATGATTAGATTTCTGGTGGTTTTTGTTTATTTTCTTTTTGTTGTTTGCTTTAAAACATTTATGTAGTTAACTACATTTGAGAGTACTAACTCATTTATCTTATAATTTTATTATTTTAAATGCGATTAATGTCAGGGCTACCCATTTTTATCAACGAGTTAAAAAATTAATTGGAATGGAAGTCTTTGTTAATTAGTGCATCTTATGCTGAATTTCAATTGTTCTATTATTTTGTTGGTCTGATGGGATACGAATGCTATGCAGAGGCTGTTTTGATTTCGGGAGTAGAATTTTGTTCGATTTTGATAATGATTTCATTTCACCTAACTGCTCTTTTGAAAAGAGATGTAAAAAAAGAAGGGAATAAACGGGCTTCAGTTGCAGAGGAATTGAAAATTTCATAACTAAAATTTTCTACTTAGCTTGAACCCCCAGTATTTAACCTAACCGGGTTAGTTCATGACTTCGTTAGTGGGACGAATCCTTGGAGCTCTTACCTTATGGTTTCTCTATGGTACTATGATTTTAGATAGTGGGAAACTTTACCTTAAGATCAAAGCGTGTATGAATTAACATGAAGTTACTTCTCAAAACCAATTGGTATTGAGTCGGGAACTATCAATTTCTTTTATTTGGTTTACCAATCTTGAATTGTAATCCATTTTTTGTTATTGGAGTGAATGGTCTTTCGGGTTTAATGGATTTAGGTACTATATTAAATAACATGAAGTTTAATTTCAAAATTAATTGACAATAAGTGGAGTAACTCTTCTATCTTATAACTAATAGAAGATATCCTCATCTTTTCAATTTTGATCTTAATCAAATTCAAAATTTGAAAATGACTCTGTTAATTTGGATTTTAGCAATATTCCCTGGAAGATAAAGAGGAGAAGGTGGATATACCAAAGCCCTCAGAAGAAAAAGAGGTAGAGAACTCGGAAAATTCTCCTCCAGCTGAAGTTGTGAAGAATGATGAACCGACTGTCGAAGCTGTTTCTGATGAAGGCAGTGACAACACTCCTGCTGTTGAAATCATTGAAGATGCTACGGTAGCTGCTGCTGTAGAAGACTCCGAAACCAACGACGTTGCTGAAAACGACAGTGGAACTGCCGATCAAGAAAGCAGCGATGAGCCACCCGAGATTAAGGTTGCTGACTCTGATGATCTATCAAAAACGCCTTTGTTTATTTTTGAAACACTTGACATTAAGGAATTTTGTGTTTTTGTGTTTATTTTTTGTTCATTCTTATGTTGCTCATATGCAGCTCGAAACAGCACCAGTGGATTTTCGGTTTCCAACTACGAATCAAACCAGGCATTGCTTCACCCGCTATATTGAGTACCATAGGTAAATTTTGTTATGTTTTTCAACTTACCCCTTTTGTCTTTATTTTTTTATTTCTTATTCATAATTTAATTGAACTTTCTTGAAAATGTGTTCTAACGCATACAGATGCACACAAGTGAAAGGGGAAGGTGCTCCCGAATGCGACAAGTTTGCGAAATATTATCGATCTCTTTGCCCTAGTGAATGGGTATATCCATTTTCTCTTAATTGCTTGCTATCTTATTTATGTACCTTCACATTTTTCTTAATCACCCTTGTTTCAAAAAGTAATATTGATGTGTCTTTGCTTATGACTTTTTCAGGTGGATAAGTGGAATGAGCAAAGGGAGAACGGAACCTTCCCAGGTCCACTGTAGGAGTCGGTCTATTCGAAATTCAGCAGCAGTTCCACCGAATGCTTCTGCCGTTCGATGGCGAATAAACCTGTGGACTGTTCTCTTTCAAACAATTGAGCTAATAATTTTCGGCTGATTTTAGTATTAATTCAAAATCCTTTTACAAGCGAAGTTTTGTTGATGCTACGTTTTTTATTGGAATGCGGTTCGTGGTTTATGTAAACGTTTCCTTATTAAAACCCAATAGTTCAATGGAGTTGAATTACTCCTGTAAGACCCACAACACTGCTTTTATGAACATTCTAATAAGGTGCGGAAAGTTTCTCTTA

mRNA sequence

ATCATCGGAACCAGTGTGTGGTTAATCTAACCTAACCATCGAGTTAGTGTTTTCATCTCTTTCGTTTACCCTTTTCTGCCGCATCTGAAATCCATTCGTTTTTTCTGTAGCTGCAAAGAAACCCGATCGCTTCTTCTTCCATCCATGGCGGAATCGCAGAGCGAAAAAGTCCCTTCTCTAGCTGAGCAATATTCCCTGGAAGATAAAGAGGAGAAGGTGGATATACCAAAGCCCTCAGAAGAAAAAGAGGTAGAGAACTCGGAAAATTCTCCTCCAGCTGAAGTTGTGAAGAATGATGAACCGACTGTCGAAGCTGTTTCTGATGAAGGCAGTGACAACACTCCTGCTGTTGAAATCATTGAAGATGCTACGGTAGCTGCTGCTGTAGAAGACTCCGAAACCAACGACGTTGCTGAAAACGACAGTGGAACTGCCGATCAAGAAAGCAGCGATGAGCCACCCGAGATTAAGCTCGAAACAGCACCAGTGGATTTTCGGTTTCCAACTACGAATCAAACCAGGCATTGCTTCACCCGCTATATTGAGTACCATAGATGCACACAAGTGAAAGGGGAAGGTGCTCCCGAATGCGACAAGTTTGCGAAATATTATCGATCTCTTTGCCCTAGTGAATGGGTGGATAAGTGGAATGAGCAAAGGGAGAACGGAACCTTCCCAGGTCCACTGTAGGAGTCGGTCTATTCGAAATTCAGCAGCAGTTCCACCGAATGCTTCTGCCGTTCGATGGCGAATAAACCTGTGGACTGTTCTCTTTCAAACAATTGAGCTAATAATTTTCGGCTGATTTTAGTATTAATTCAAAATCCTTTTACAAGCGAAGTTTTGTTGATGCTACGTTTTTTATTGGAATGCGGTTCGTGGTTTATGTAAACGTTTCCTTATTAAAACCCAATAGTTCAATGGAGTTGAATTACTCCTGTAAGACCCACAACACTGCTTTTATGAACATTCTAATAAGGTGCGGAAAGTTTCTCTTA

Coding sequence (CDS)

ATGGCGGAATCGCAGAGCGAAAAAGTCCCTTCTCTAGCTGAGCAATATTCCCTGGAAGATAAAGAGGAGAAGGTGGATATACCAAAGCCCTCAGAAGAAAAAGAGGTAGAGAACTCGGAAAATTCTCCTCCAGCTGAAGTTGTGAAGAATGATGAACCGACTGTCGAAGCTGTTTCTGATGAAGGCAGTGACAACACTCCTGCTGTTGAAATCATTGAAGATGCTACGGTAGCTGCTGCTGTAGAAGACTCCGAAACCAACGACGTTGCTGAAAACGACAGTGGAACTGCCGATCAAGAAAGCAGCGATGAGCCACCCGAGATTAAGCTCGAAACAGCACCAGTGGATTTTCGGTTTCCAACTACGAATCAAACCAGGCATTGCTTCACCCGCTATATTGAGTACCATAGATGCACACAAGTGAAAGGGGAAGGTGCTCCCGAATGCGACAAGTTTGCGAAATATTATCGATCTCTTTGCCCTAGTGAATGGGTGGATAAGTGGAATGAGCAAAGGGAGAACGGAACCTTCCCAGGTCCACTGTAG

Protein sequence

MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAEVVKNDEPTVEAVSDEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTADQESSDEPPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVDKWNEQRENGTFPGPL
Homology
[Close]
BLAST of Sed0002634 vs. NCBI nr
Match: XP_023547029.1 (cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 1.9e-71
Identity = 146/182 (80.22%), Postives = 160/182 (87.91%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAE-VVKNDEPTVEAVS 60
           MAE+QSEK PSL+EQYSL++KEEKVDIPKPSE KEV+NSEN+ PAE VVKNDEP VEA +
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDIPKPSEVKEVDNSENAAPAEVVVKNDEPPVEADA 60

Query: 61  DEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTADQESSDEPPEIKLETAPVDFRF 120
           D+GSDNTPA E   DA+ AAAVEDSETN  A  +  + DQES+DE PEIKLETAP DFRF
Sbjct: 61  DQGSDNTPADENNGDASAAAAVEDSETNAAAGEEEISGDQESTDERPEIKLETAPADFRF 120

Query: 121 PTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVDKWNEQRENGTFPG 180
           PTTNQTRHCFTRYIEYHRCTQ KGEGAPECDKFAKYYRSLCP+EWV+KWNEQRENG FPG
Sbjct: 121 PTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEWVEKWNEQRENGCFPG 180

Query: 181 PL 182
           PL
Sbjct: 181 PL 182

[Close]
BLAST of Sed0002634 vs. NCBI nr
Match: KAG6598699.1 (Cytochrome c oxidase subunit 6b-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 145/182 (79.67%), Postives = 159/182 (87.36%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAE-VVKNDEPTVEAVS 60
           MAE+QSEK PSL+EQYSL++KEEKVDIPKPSE KEVENSEN+ PAE VVKNDEP VEA +
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDIPKPSEVKEVENSENADPAEVVVKNDEPPVEADA 60

Query: 61  DEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTADQESSDEPPEIKLETAPVDFRF 120
           D+GS+N PA E   DA+ AAAVEDSETN  A  +  + DQES+DE PEIKLETAP DFRF
Sbjct: 61  DQGSNNPPADENNGDASAAAAVEDSETNAAAGEEEISGDQESTDERPEIKLETAPADFRF 120

Query: 121 PTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVDKWNEQRENGTFPG 180
           PTTNQTRHCFTRYIEYHRCTQ KGEGAPECDKFAKYYRSLCP+EWV+KWNEQRENG FPG
Sbjct: 121 PTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEWVEKWNEQRENGCFPG 180

Query: 181 PL 182
           PL
Sbjct: 181 PL 182

[Close]
BLAST of Sed0002634 vs. NCBI nr
Match: KAG7029641.1 (Cytochrome c oxidase subunit 6b-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 145/182 (79.67%), Postives = 159/182 (87.36%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAE-VVKNDEPTVEAVS 60
           MAE+QSEK PSL+EQYSL++KEEKVDIPKPSE KEVENSEN+ PAE VVKNDEP VEA +
Sbjct: 76  MAEAQSEKPPSLSEQYSLKEKEEKVDIPKPSEVKEVENSENADPAEVVVKNDEPPVEADA 135

Query: 61  DEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTADQESSDEPPEIKLETAPVDFRF 120
           D+GS+N PA E   DA+ AAAVEDSETN  A  +  + DQES+DE PEIKLETAP DFRF
Sbjct: 136 DQGSNNPPADENNGDASAAAAVEDSETNAAAGEEEISGDQESTDERPEIKLETAPADFRF 195

Query: 121 PTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVDKWNEQRENGTFPG 180
           PTTNQTRHCFTRYIEYHRCTQ KGEGAPECDKFAKYYRSLCP+EWV+KWNEQRENG FPG
Sbjct: 196 PTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEWVEKWNEQRENGCFPG 255

Query: 181 PL 182
           PL
Sbjct: 256 PL 257

[Close]
BLAST of Sed0002634 vs. NCBI nr
Match: XP_038886001.1 (cytochrome c oxidase subunit 6b-1-like [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 4.6e-70
Identity = 149/196 (76.02%), Postives = 161/196 (82.14%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAE-VVKNDEPTVEAVS 60
           MAE+QSEK PSLAEQYSL++KEEKVDIP PSE KEVENSEN+  AE VVKNDEP VEA +
Sbjct: 1   MAEAQSEKTPSLAEQYSLKEKEEKVDIPNPSEVKEVENSENAAHAEVVVKNDEPPVEAEA 60

Query: 61  DEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTA--------------DQESSDEP 120
           ++GSD++PA E   DA  AAAVEDSET+  AENDSG A              DQES+DE 
Sbjct: 61  NQGSDDSPAEENNGDAPAAAAVEDSETSPAAENDSGAADEESSGAGGEENSGDQESTDER 120

Query: 121 PEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWV 180
           PEIKLETAP DFRFPTTNQTRHCFTRYIEYHRC Q KGEGAPECDKFAKYYRSLCPSEWV
Sbjct: 121 PEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPSEWV 180

Query: 181 DKWNEQRENGTFPGPL 182
           +KWNEQRENGTFPGPL
Sbjct: 181 EKWNEQRENGTFPGPL 196

[Close]
BLAST of Sed0002634 vs. NCBI nr
Match: XP_022997269.1 (cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 273.9 bits (699), Expect = 1.0e-69
Identity = 145/182 (79.67%), Postives = 158/182 (86.81%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAE-VVKNDEPTVEAVS 60
           MAE+QSEK PSL+EQYSL++KEEKVDI KPSE KEVENSEN+ PAE VVKNDEP VEA +
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDILKPSEVKEVENSENAAPAEIVVKNDEPPVEADA 60

Query: 61  DEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTADQESSDEPPEIKLETAPVDFRF 120
           D+GS+N PA E   DA+ AAAVEDSETN  A  +  + DQES+DE PEIKLETAP DFRF
Sbjct: 61  DKGSNNPPADENNGDASAAAAVEDSETNAAAGEEEISGDQESTDEQPEIKLETAPADFRF 120

Query: 121 PTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVDKWNEQRENGTFPG 180
           PTTNQTRHCFTRYIEYHRCTQ KGEGAPECDKFAKYYRSLCPSEWV+KWNEQRENG FPG
Sbjct: 121 PTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPSEWVEKWNEQRENGCFPG 180

Query: 181 PL 182
           PL
Sbjct: 181 PL 182

[Close]
BLAST of Sed0002634 vs. ExPASy Swiss-Prot
Match: Q9S7L9 (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.1e-45
Identity = 104/190 (54.74%), Postives = 129/190 (67.89%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAEV----VKNDEPTVE 60
           MA++ + + PSL+EQY LE + ++    KP E KEV     +   EV     K + P  E
Sbjct: 1   MADAVNAQTPSLSEQYHLEKEVKQDTSAKPVEVKEVAPEVTTQAEEVKTEQAKEESPVEE 60

Query: 61  AVS--DEGSDNTP-AVEIIEDATVAAAVEDSETNDVAE--NDSGTADQESSDEPPEIKLE 120
           AVS  +E S++ P + E+  +A  AA     ET   AE  ND   +++ + + P EIKLE
Sbjct: 61  AVSVVEEKSESAPESTEVASEAPAAAEDNAEETPAAAEENNDENASEEVAEETPDEIKLE 120

Query: 121 TAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVDKWNEQ 180
           TAP DFRFPTTNQTRHCFTRY+EYHRC   KG+ APECDKFAK+YRSLCPSEWVD+WNEQ
Sbjct: 121 TAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVDRWNEQ 180

Query: 181 RENGTFPGPL 182
           RENGTFPGPL
Sbjct: 181 RENGTFPGPL 190

[Close]
BLAST of Sed0002634 vs. ExPASy Swiss-Prot
Match: Q9SUD3 (Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=2 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 6.5e-35
Identity = 62/75 (82.67%), Postives = 68/75 (90.67%), Query Frame = 0 

Query: 107 EIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVD 166
           EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRCT  KGE A EC++FAKYYR+LCP EWVD
Sbjct: 4   EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWVD 63

Query: 167 KWNEQRENGTFPGPL 182
           KWNEQRE GTFPGPL
Sbjct: 64  KWNEQRETGTFPGPL 78

[Close]
BLAST of Sed0002634 vs. ExPASy Swiss-Prot
Match: Q945L0 (Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.2e-34
Identity = 60/75 (80.00%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 107 EIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVD 166
           EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRCT  KGE + +C++FAKYYR+LCP EWVD
Sbjct: 4   EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWVD 63

Query: 167 KWNEQRENGTFPGPL 182
           KWNEQRE+GTFPGPL
Sbjct: 64  KWNEQRESGTFPGPL 78

[Close]
BLAST of Sed0002634 vs. ExPASy Swiss-Prot
Match: O94581 (Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox12 PE=3 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 3.7e-22
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0 

Query: 97  ADQESSDEPPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYY 156
           ++QE  + P +    T   D RFP TNQT+HCF  YI+Y RC + KGE    C +F   Y
Sbjct: 2   SEQEDQEAPKQFTFGTVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAY 61

Query: 157 RSLCPSEWVDKWNEQRENGTFPGPL 182
           +SLCP EWV++W+EQRENGTFP P+
Sbjct: 62  QSLCPMEWVERWDEQRENGTFPAPI 86

[Close]
BLAST of Sed0002634 vs. ExPASy Swiss-Prot
Match: Q01519 (Cytochrome c oxidase subunit 12, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=COX12 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 0 

Query: 97  ADQESSDEPPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYY 156
           ADQE+S       L T   D RFP  NQT+HC+  Y++YH+C  +KGE    C  F K Y
Sbjct: 2   ADQENS------PLHTVGFDARFPQQNQTKHCWQSYVDYHKCVNMKGEDFAPCKVFWKTY 61

Query: 157 RSLCPSEWVDKWNEQRENGTFPGPL 182
            +LCP +W++KW++QRE G F G +
Sbjct: 62  NALCPLDWIEKWDDQREKGIFAGDI 80

[Close]
BLAST of Sed0002634 vs. ExPASy TrEMBL
Match: A0A6J1KAZ5 (cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492226 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.9e-70
Identity = 145/182 (79.67%), Postives = 158/182 (86.81%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAE-VVKNDEPTVEAVS 60
           MAE+QSEK PSL+EQYSL++KEEKVDI KPSE KEVENSEN+ PAE VVKNDEP VEA +
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDILKPSEVKEVENSENAAPAEIVVKNDEPPVEADA 60

Query: 61  DEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTADQESSDEPPEIKLETAPVDFRF 120
           D+GS+N PA E   DA+ AAAVEDSETN  A  +  + DQES+DE PEIKLETAP DFRF
Sbjct: 61  DKGSNNPPADENNGDASAAAAVEDSETNAAAGEEEISGDQESTDEQPEIKLETAPADFRF 120

Query: 121 PTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVDKWNEQRENGTFPG 180
           PTTNQTRHCFTRYIEYHRCTQ KGEGAPECDKFAKYYRSLCPSEWV+KWNEQRENG FPG
Sbjct: 121 PTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPSEWVEKWNEQRENGCFPG 180

Query: 181 PL 182
           PL
Sbjct: 181 PL 182

[Close]
BLAST of Sed0002634 vs. ExPASy TrEMBL
Match: A0A6J1HH76 (cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462906 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69
Identity = 143/182 (78.57%), Postives = 158/182 (86.81%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAE-VVKNDEPTVEAVS 60
           MAE+QSEK PSL+EQYSL++KEEKVDIPKPSE +EVENSEN+ PAE VVKNDEP VEA +
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDIPKPSEVEEVENSENAVPAEVVVKNDEPPVEADA 60

Query: 61  DEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTADQESSDEPPEIKLETAPVDFRF 120
           D+GS+N PA     DA+ AAAVEDSETN  A  +  + DQES+DE PEIKLETAP DFRF
Sbjct: 61  DQGSNNPPADVNNGDASAAAAVEDSETNAAAGEEEISGDQESTDERPEIKLETAPADFRF 120

Query: 121 PTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVDKWNEQRENGTFPG 180
           PTTNQTRHCFTRYIEYHRCTQ KGEGAPECDKFAKYYRSLCP+EWV+KWNEQRENG FPG
Sbjct: 121 PTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEWVEKWNEQRENGCFPG 180

Query: 181 PL 182
           PL
Sbjct: 181 PL 182

[Close]
BLAST of Sed0002634 vs. ExPASy TrEMBL
Match: A0A0A0LNV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369100 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.2e-69
Identity = 147/196 (75.00%), Postives = 164/196 (83.67%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAE-VVKNDEPTVEAVS 60
           MAE+QS++ PSL+EQYSL++KEEKVDIP+PSE KEVENSEN+ PAE VVKNDEP VEAV+
Sbjct: 1   MAEAQSQQTPSLSEQYSLKEKEEKVDIPQPSEVKEVENSENAAPAEVVVKNDEPPVEAVA 60

Query: 61  DEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTA--------------DQESSDEP 120
           D+ SD  PA E   D++ AAAVEDSET+  AENDSG A              DQES+DE 
Sbjct: 61  DQSSDIPPAEESNGDSS-AAAVEDSETSPAAENDSGAAEEESSGAGEEENSGDQESTDER 120

Query: 121 PEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWV 180
           PEIKLETAPVDFRFPTTNQTRHCFTRYIE+HRCTQ KGEGAPEC+KFAKYYRSLCPSEWV
Sbjct: 121 PEIKLETAPVDFRFPTTNQTRHCFTRYIEFHRCTQAKGEGAPECEKFAKYYRSLCPSEWV 180

Query: 181 DKWNEQRENGTFPGPL 182
           +KWNEQRENGTFPGPL
Sbjct: 181 EKWNEQRENGTFPGPL 195

[Close]
BLAST of Sed0002634 vs. ExPASy TrEMBL
Match: A0A5A7VCW9 (Cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004690 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.9e-67
Identity = 145/197 (73.60%), Postives = 157/197 (79.70%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAE-VVKNDEPTVEAVS 60
           MAE+QSE+  SLAEQYSL++KEEKVDIP PSE KEVEN+EN+ PAE VVKNDEP VEA +
Sbjct: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60

Query: 61  DEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTA---------------DQESSDE 120
           D+ SDN PA E       + AVEDSET   AENDSG A               DQES+DE
Sbjct: 61  DQSSDNPPAEE-------SPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDE 120

Query: 121 PPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEW 180
            PEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQ KGEGAPEC+KFAKYYRSLCPSEW
Sbjct: 121 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 180

Query: 181 VDKWNEQRENGTFPGPL 182
           V+KWNEQRENGTFPGPL
Sbjct: 181 VEKWNEQRENGTFPGPL 190

[Close]
BLAST of Sed0002634 vs. ExPASy TrEMBL
Match: A0A1S3BC78 (cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo OX=3656 GN=LOC103488079 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.9e-67
Identity = 145/197 (73.60%), Postives = 157/197 (79.70%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAE-VVKNDEPTVEAVS 60
           MAE+QSE+  SLAEQYSL++KEEKVDIP PSE KEVEN+EN+ PAE VVKNDEP VEA +
Sbjct: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60

Query: 61  DEGSDNTPAVEIIEDATVAAAVEDSETNDVAENDSGTA---------------DQESSDE 120
           D+ SDN PA E       + AVEDSET   AENDSG A               DQES+DE
Sbjct: 61  DQSSDNPPAEE-------SPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDE 120

Query: 121 PPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEW 180
            PEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQ KGEGAPEC+KFAKYYRSLCPSEW
Sbjct: 121 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 180

Query: 181 VDKWNEQRENGTFPGPL 182
           V+KWNEQRENGTFPGPL
Sbjct: 181 VEKWNEQRENGTFPGPL 190

[Close]
BLAST of Sed0002634 vs. TAIR 10
Match: AT1G22450.1 (cytochrome C oxidase 6B )

HSP 1 Score: 182.6 bits (462), Expect = 2.9e-46
Identity = 104/190 (54.74%), Postives = 129/190 (67.89%), Query Frame = 0 

Query: 1   MAESQSEKVPSLAEQYSLEDKEEKVDIPKPSEEKEVENSENSPPAEV----VKNDEPTVE 60
           MA++ + + PSL+EQY LE + ++    KP E KEV     +   EV     K + P  E
Sbjct: 1   MADAVNAQTPSLSEQYHLEKEVKQDTSAKPVEVKEVAPEVTTQAEEVKTEQAKEESPVEE 60

Query: 61  AVS--DEGSDNTP-AVEIIEDATVAAAVEDSETNDVAE--NDSGTADQESSDEPPEIKLE 120
           AVS  +E S++ P + E+  +A  AA     ET   AE  ND   +++ + + P EIKLE
Sbjct: 61  AVSVVEEKSESAPESTEVASEAPAAAEDNAEETPAAAEENNDENASEEVAEETPDEIKLE 120

Query: 121 TAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVDKWNEQ 180
           TAP DFRFPTTNQTRHCFTRY+EYHRC   KG+ APECDKFAK+YRSLCPSEWVD+WNEQ
Sbjct: 121 TAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVDRWNEQ 180

Query: 181 RENGTFPGPL 182
           RENGTFPGPL
Sbjct: 181 RENGTFPGPL 190

[Close]
BLAST of Sed0002634 vs. TAIR 10
Match: AT4G28060.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 148.7 bits (374), Expect = 4.6e-36
Identity = 62/75 (82.67%), Postives = 68/75 (90.67%), Query Frame = 0 

Query: 107 EIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVD 166
           EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRCT  KGE A EC++FAKYYR+LCP EWVD
Sbjct: 4   EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWVD 63

Query: 167 KWNEQRENGTFPGPL 182
           KWNEQRE GTFPGPL
Sbjct: 64  KWNEQRETGTFPGPL 78

[Close]
BLAST of Sed0002634 vs. TAIR 10
Match: AT5G57815.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.3e-35
Identity = 60/75 (80.00%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 107 EIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVD 166
           EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRCT  KGE + +C++FAKYYR+LCP EWVD
Sbjct: 4   EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWVD 63

Query: 167 KWNEQRENGTFPGPL 182
           KWNEQRE+GTFPGPL
Sbjct: 64  KWNEQRESGTFPGPL 78

[Close]
BLAST of Sed0002634 vs. TAIR 10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12
Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0 

Query: 113 APVDFRFPTTNQTRHCFTRYIEYHRCTQVKGEGAPECDKFAKYYRSLCPSEWVDK-WNEQ 172
           A V+ RFP TN+TRHCF R+++YH+C +  G  A +C+    Y RS+CP E V K W + 
Sbjct: 59  AAVEERFPVTNETRHCFNRFMQYHKCIEKNGRDANDCNNLRDYVRSICPEELVSKIWLKS 118

Query: 173 REN 175
             N
Sbjct: 119 GRN 121

The following BLAST results are available for this feature:
BLAST of Sed0002634 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023547029.11.9e-7180.22cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG6598699.11.6e-7079.67Cytochrome c oxidase subunit 6b-1, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7029641.11.6e-7079.67Cytochrome c oxidase subunit 6b-1, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038886001.14.6e-7076.02cytochrome c oxidase subunit 6b-1-like [Benincasa hispida][more]
XP_022997269.11.0e-6979.67cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita maxima][more]
BLAST of Sed0002634 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9S7L94.1e-4554.74Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=... [more]
Q9SUD36.5e-3582.67Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=... [more]
Q945L03.2e-3480.00Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=... [more]
O945813.7e-2251.76Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (str... [more]
Q015191.2e-1745.88Cytochrome c oxidase subunit 12, mitochondrial OS=Saccharomyces cerevisiae (stra... [more]
BLAST of Sed0002634 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KAZ54.9e-7079.67cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1HH761.9e-6978.57cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita moschata OX=3662 ... [more]
A0A0A0LNV64.2e-6975.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369100 PE=4 SV=1[more]
A0A5A7VCW93.9e-6773.60Cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3BC783.9e-6773.60cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo OX=3656 GN=LOC103488079 P... [more]
BLAST of Sed0002634 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G22450.12.9e-4654.74cytochrome C oxidase 6B [more]
AT4G28060.14.6e-3682.67Cytochrome c oxidase, subunit Vib family protein [more]
AT5G57815.12.3e-3580.00Cytochrome c oxidase, subunit Vib family protein [more]
AT1G32710.11.6e-1246.03Cytochrome c oxidase, subunit Vib family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036549Cytochrome c oxidase, subunit VIb superfamilyGENE3D1.10.10.140Cytochrome c oxidase, subunit VIbcoord: 104..181
e-value: 1.4E-32
score: 113.4
IPR036549Cytochrome c oxidase, subunit VIb superfamilySUPERFAMILY47694Cytochrome c oxidase subunit hcoord: 107..180
IPR003213Cytochrome c oxidase, subunit VIbPFAMPF02297COX6Bcoord: 118..177
e-value: 1.6E-16
score: 60.3
IPR003213Cytochrome c oxidase, subunit VIbCDDcd00926Cyt_c_Oxidase_VIbcoord: 106..180
e-value: 3.82584E-41
score: 131.661
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..112
NoneNo IPR availablePANTHERPTHR46281:SF15CYTOCHROME C OXIDASE, SUBUNIT VIB FAMILY PROTEINcoord: 1..181
NoneNo IPR availablePANTHERPTHR46281CYTOCHROME C OXIDASE SUBUNIT 6Bcoord: 1..181
NoneNo IPR availablePROSITEPS51808CHCHcoord: 125..168
score: 12.408831

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0002634.1Sed0002634.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
cellular_component GO:0045277 respiratory chain complex IV