Sed0002588 (gene) Chayote v1

Overview


Name	Sed0002588
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Calcium-binding EF-hand family protein
Location	LG07: 42882310 .. 42882997 (+)
RNA-Seq Expression	Sed0002588
Synteny	Sed0002588

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAGAAAAATTAAGATTCTTCAGGATATGAACTTCAACGGAAACTTAATACAATGAAAAATCAACAAAATCGACTCACCGCCATGGCAGAGTTTCTGGCGAGCTTCCGCCGCCGCCTCATTTCCTCATCCAAGCAATATCCAGAGTTTATAAATCAGCCAAAATCACAAACCGAGCCAAAGAGCTTCAAATCCGCATCGGTTTCTCAATCGCCGATGGCTCCATTGAACTCCACCGATTTACAGAGGATCTTCGAATCAATCGACAGAAACAGCGACGGATTCGTTAGCATCGAGGAGCTTCACTGGCTGCTAAATCAAATCGGCGGCGGCGACCTAATTTCGGAGGATCTGGAGGAACTGGTAGGCAAATCGAAGGTCGATTTGAATGAGTTCTTGCGATTGTGCGAAGTGATATCGGAGAAGAATGGTGGCGAAGAGGAGATTGAGAGCGATGTTTTGAGTGCGTTCAAGGTGTTCGATGAAAATGGCGATGGATTTATTTCGAGCGATGAGATCGGGAATGTGTTGGTGAGATTAGGGCTTTGGGATTACGAGCGGTGTGGCGGCGGCGGTGGCGATTGGAGCCGACGTATGATTGAAGCGTTTGATACCAATTTGGATGGGAAGCTTGATTTTCAGGAGTTTAAGAACATGATCATGCCCTCTTCACATTCTTCTTCTTAG

mRNA sequence

AGAAAAGAAAAATTAAGATTCTTCAGGATATGAACTTCAACGGAAACTTAATACAATGAAAAATCAACAAAATCGACTCACCGCCATGGCAGAGTTTCTGGCGAGCTTCCGCCGCCGCCTCATTTCCTCATCCAAGCAATATCCAGAGTTTATAAATCAGCCAAAATCACAAACCGAGCCAAAGAGCTTCAAATCCGCATCGGTTTCTCAATCGCCGATGGCTCCATTGAACTCCACCGATTTACAGAGGATCTTCGAATCAATCGACAGAAACAGCGACGGATTCGTTAGCATCGAGGAGCTTCACTGGCTGCTAAATCAAATCGGCGGCGGCGACCTAATTTCGGAGGATCTGGAGGAACTGGTAGGCAAATCGAAGGTCGATTTGAATGAGTTCTTGCGATTGTGCGAAGTGATATCGGAGAAGAATGGTGGCGAAGAGGAGATTGAGAGCGATGTTTTGAGTGCGTTCAAGGTGTTCGATGAAAATGGCGATGGATTTATTTCGAGCGATGAGATCGGGAATGTGTTGGTGAGATTAGGGCTTTGGGATTACGAGCGGTGTGGCGGCGGCGGTGGCGATTGGAGCCGACGTATGATTGAAGCGTTTGATACCAATTTGGATGGGAAGCTTGATTTTCAGGAGTTTAAGAACATGATCATGCCCTCTTCACATTCTTCTTCTTAG

Coding sequence (CDS)

ATGAAAAATCAACAAAATCGACTCACCGCCATGGCAGAGTTTCTGGCGAGCTTCCGCCGCCGCCTCATTTCCTCATCCAAGCAATATCCAGAGTTTATAAATCAGCCAAAATCACAAACCGAGCCAAAGAGCTTCAAATCCGCATCGGTTTCTCAATCGCCGATGGCTCCATTGAACTCCACCGATTTACAGAGGATCTTCGAATCAATCGACAGAAACAGCGACGGATTCGTTAGCATCGAGGAGCTTCACTGGCTGCTAAATCAAATCGGCGGCGGCGACCTAATTTCGGAGGATCTGGAGGAACTGGTAGGCAAATCGAAGGTCGATTTGAATGAGTTCTTGCGATTGTGCGAAGTGATATCGGAGAAGAATGGTGGCGAAGAGGAGATTGAGAGCGATGTTTTGAGTGCGTTCAAGGTGTTCGATGAAAATGGCGATGGATTTATTTCGAGCGATGAGATCGGGAATGTGTTGGTGAGATTAGGGCTTTGGGATTACGAGCGGTGTGGCGGCGGCGGTGGCGATTGGAGCCGACGTATGATTGAAGCGTTTGATACCAATTTGGATGGGAAGCTTGATTTTCAGGAGTTTAAGAACATGATCATGCCCTCTTCACATTCTTCTTCTTAG

Protein sequence

MKNQQNRLTAMAEFLASFRRRLISSSKQYPEFINQPKSQTEPKSFKSASVSQSPMAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEFLRLCEVISEKNGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERCGGGGGDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSSS

Homology

[Close]

BLAST of Sed0002588 vs. NCBI nr
Match: XP_038899375.1 (calmodulin-like protein 3 [Benincasa hispida])

HSP 1 Score: 212.2 bits (539), Expect = 4.2e-51
Identity = 115/160 (71.88%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 55  MAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEF 114
           M+PLNS+DLQRIFE+IDRN DGFVS+EEL+ LLN+I G DL SEDLE L GKSK+DLNEF
Sbjct: 56  MSPLNSSDLQRIFETIDRNGDGFVSMEELNLLLNRI-GVDLASEDLESLTGKSKIDLNEF 115

Query: 115 LRLCEVISEK----NGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERC 174
           L L E ISEK    N G EE+ESD+L+AF VFDEN DGFIS DE+ NVLVRLGLW+ ERC
Sbjct: 116 LCLYESISEKKEGENRGSEEVESDLLNAFMVFDENRDGFISCDELENVLVRLGLWNDERC 175

Query: 175 GGGGGDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSSS 211
           GG GGD+ RRMI AFD +LDG++DFQEFKNM M SS+S S
Sbjct: 176 GGCGGDYCRRMIGAFDMDLDGRIDFQEFKNM-MNSSNSPS 213

[Close]

BLAST of Sed0002588 vs. NCBI nr
Match: XP_022976028.1 (probable calcium-binding protein CML44 [Cucurbita maxima])

HSP 1 Score: 205.7 bits (522), Expect = 4.0e-49
Identity = 108/156 (69.23%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 55  MAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEF 114
           M+P N++DLQRIFE+IDRN DGFVSIEELHWLLN+  G D IS+DLE L+GKSK+D +EF
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRT-GVDFISDDLESLIGKSKIDFDEF 60

Query: 115 LRLCEVISEKNGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERCGGGG 174
           L L E ISE N G EEIESD+L+AF+VFDEN DGFIS DE+ NVLVRLGLWD +RC    
Sbjct: 61  LSLYESISEINRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLGLWDDKRCVRD- 120

Query: 175 GDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSSS 211
               RRMI AFD +LDG+LDF+EFKNM+  SSHSSS
Sbjct: 121 ---CRRMIGAFDVDLDGRLDFEEFKNMMNYSSHSSS 151

[Close]

BLAST of Sed0002588 vs. NCBI nr
Match: KAG6592136.1 (Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201.4 bits (511), Expect = 7.5e-48
Identity = 106/156 (67.95%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 55  MAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEF 114
           M+P N++DLQRIFE+IDRN DGFVSIEELHWLLN+  G D IS+DLE L+GKS +D +EF
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRT-GVDFISDDLESLIGKSMIDFDEF 60

Query: 115 LRLCEVISEKNGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERCGGGG 174
           L L E ISE N G EEIESD+L+AF+VFDEN DGFIS DE+ NVLVRLGLWD +RC    
Sbjct: 61  LSLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRD- 120

Query: 175 GDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSSS 211
               RRMI AFD +LDG+LDF+EFKNM+  SS+SSS
Sbjct: 121 ---CRRMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS 151

[Close]

BLAST of Sed0002588 vs. NCBI nr
Match: KAG7025009.1 (Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.1 bits (510), Expect = 9.7e-48
Identity = 106/156 (67.95%), Postives = 124/156 (79.49%), Query Frame = 0


Query: 55  MAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEF 114
           M+P N++DLQRIFE+IDRN DGFVSIEELHWLLN+  G D IS+DLE L+GKS +D +EF
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRT-GVDFISDDLESLIGKSMIDFDEF 60

Query: 115 LRLCEVISEKNGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERCGGGG 174
           L L E ISE N G EEIESD+L+AF+VFDEN DGFIS DE+ NVLVRLGLWD  RC    
Sbjct: 61  LSLYESISEMNRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLGLWDDRRCVRD- 120

Query: 175 GDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSSS 211
               RRMI AFD +LDG+LDF+EFKNM+  SS+SSS
Sbjct: 121 ---CRRMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS 151

[Close]

BLAST of Sed0002588 vs. NCBI nr
Match: XP_023536413.1 (probable calcium-binding protein CML44 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 3.7e-47
Identity = 105/155 (67.74%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 55  MAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEF 114
           M+P N++DLQRIFE+IDRN DGFVSIEELHWLLN+  G D IS+DLE L+GKS +D +EF
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRT-GVDFISDDLESLIGKSMIDFDEF 60

Query: 115 LRLCEVISEKNGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERCGGGG 174
           L L E ISE N G EEIESD+L+AF+VFDEN DGFIS DE+ NVLVRLGLWD  RC    
Sbjct: 61  LSLYESISEINRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLGLWDDRRCVRD- 120

Query: 175 GDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSS 210
               RRMI AFD +LDG+LDF+EFKNM+  SS+SS
Sbjct: 121 ---CRRMIGAFDVDLDGRLDFEEFKNMMNYSSNSS 150

[Close]

BLAST of Sed0002588 vs. ExPASy Swiss-Prot
Match: Q9LPK5 (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana OX=3702 GN=CML44 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25
Identity = 61/153 (39.87%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 58  LNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEFLRL 117
           + + DL+R+F+++D+N DG V+++EL W+L+++G  +   ++LE +VGK  +DL+EFLR 
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 118 -CEVISEKNGGEEEI------ESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERC 177
             + + +  G ++ I      +  +  AF VFD NGDG+IS++E+ +VL RLG  +  + 
Sbjct: 66  YYDAVLDSKGSKKNIDVVADNDEAIARAFNVFDVNGDGYISAEELRDVLERLGFEEEAKA 125

Query: 178 GGGGGDWSRRMIEAFDTNLDGKLDFQEFKNMIM 204
              G     RMI   D NLDG +DF+EFKNMI+
Sbjct: 126 WDCG-----RMIRVHDKNLDGFVDFEEFKNMIL 153

[Close]

BLAST of Sed0002588 vs. ExPASy Swiss-Prot
Match: Q9SVG9 (Calcium-binding protein CML42 OS=Arabidopsis thaliana OX=3702 GN=CML42 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-20
Identity = 70/174 (40.23%), Postives = 99/174 (56.90%), Query Frame = 0


Query: 58  LNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIG-GGDLISEDLEELV------GKSKVD 117
           LN+  LQRIF+  D+N DGF+++EEL   L ++G   DL   DL+  V      G + ++
Sbjct: 25  LNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADL--SDLKSTVESYIQPGNTGLN 84

Query: 118 LNEFLRLCEVISEK------NGGEE--------EIESDVLSAFKVFDENGDGFISSDEIG 177
            ++F  L + + +        GGE         E ESD+  AFKVFDENGDGFIS+ E+ 
Sbjct: 85  FDDFSSLHKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQ 144

Query: 178 NVLVRLGLWDYERCGGGGGDWSRRMIEAFDTNLDGKLDFQEFKNM----IMPSS 207
            VL +LGL +     GG  +   +MI + D N DG++DF EFKNM    ++PSS
Sbjct: 145 TVLKKLGLPE-----GGEMERVEKMIVSVDRNQDGRVDFFEFKNMMRTVVIPSS 191

[Close]

BLAST of Sed0002588 vs. ExPASy Swiss-Prot
Match: Q9FI19 (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.4e-17
Identity = 65/175 (37.14%), Postives = 97/175 (55.43%), Query Frame = 0


Query: 41  EPKSFKSASVSQSPMAP-LNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISED 100
           E K     S S    +P LN+  L R+F+  D+N+DGF+++EEL   L+++ G D    D
Sbjct: 6   EKKKLSRQSSSFRLRSPSLNALRLHRVFDLFDKNNDGFITVEELSQALSRL-GLDADFSD 65

Query: 101 LEELV------GKSKVDLNEFLRLCEVISEKNGGEE------EIESDVLSAFKVFDENGD 160
           L+  V       K+ +  ++F  L + + E   G E        ESD+  AF VFDE+GD
Sbjct: 66  LKSTVDSFIKPDKTGLRFDDFAALHKTLDESFFGGEGSCCDGSPESDLEEAFNVFDEDGD 125

Query: 161 GFISSDEIGNVLVRLGLWDYERCGGGGGDWSRRMIEAFDTNLDGKLDFQEFKNMI 203
           GFIS+ E+  VL +LGL +      G  +   +MI + D+N DG++DF EFKNM+
Sbjct: 126 GFISAVELQKVLKKLGLPE-----AGEIEQVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]

BLAST of Sed0002588 vs. ExPASy Swiss-Prot
Match: O22845 (Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 7.8e-16
Identity = 56/171 (32.75%), Postives = 96/171 (56.14%), Query Frame = 0


Query: 47  SASVSQSPMAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELV-- 106
           S S S +P   ++ ++L+R+F+  D+N DG ++ EEL+  L  + G  +  +DL +++  
Sbjct: 50  SPSSSSAPTKRIDPSELKRVFQMFDKNGDGRITKEELNDSLENL-GIYIPDKDLTQMIHK 109

Query: 107 ----GKSKVDLNEFLRL-CEVISEKNGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVL 166
               G   VD++EF  L   ++ E +   E  E D+  AF VFD++GDGFI+ +E+ +V+
Sbjct: 110 IDANGDGCVDIDEFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVM 169

Query: 167 VRLGLWDYERCGGGGGDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSSS 211
             LGL       G   D  ++MI   D + DG+++++EF  M+     SSS
Sbjct: 170 ASLGLKQ-----GKTLDGCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSSS 214

[Close]

BLAST of Sed0002588 vs. ExPASy Swiss-Prot
Match: Q0JC44 (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica OX=39947 GN=CML22 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.0e-15
Identity = 63/182 (34.62%), Postives = 93/182 (51.10%), Query Frame = 0


Query: 36  PKSQTEPKSFKSASVSQSPMAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDL 95
           PK  + P +   A   +      ++ +L R+FE  DRN DG ++ EEL   L ++ G  +
Sbjct: 66  PKKMSPPGAGAGAGSKKKQQQQADAAELARVFELFDRNGDGRITREELEDSLGKL-GIPV 125

Query: 96  ISEDLEELV------GKSKVDLNEFLRLCEVI-----SEKNG----GEEEIESDVLSAFK 155
            +++L  ++      G   VD+ EF  L   I       K+G     EEE + D+  AF+
Sbjct: 126 PADELAAVIARIDANGDGCVDVEEFGELYRSIMAGGDDSKDGRAKEEEEEEDGDMREAFR 185

Query: 156 VFDENGDGFISSDEIGNVLVRLGLWDYERCGGGGGDWSRRMIEAFDTNLDGKLDFQEFKN 203
           VFD NGDG+I+ DE+G VL  LGL       G   +  RRMI   D + DG++DF EF  
Sbjct: 186 VFDANGDGYITVDELGAVLASLGLKQ-----GRTAEECRRMIGQVDRDGDGRVDFHEFLQ 241

[Close]

BLAST of Sed0002588 vs. ExPASy TrEMBL
Match: A0A6J1IKW9 (probable calcium-binding protein CML44 OS=Cucurbita maxima OX=3661 GN=LOC111476552 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.9e-49
Identity = 108/156 (69.23%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 55  MAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEF 114
           M+P N++DLQRIFE+IDRN DGFVSIEELHWLLN+  G D IS+DLE L+GKSK+D +EF
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRT-GVDFISDDLESLIGKSKIDFDEF 60

Query: 115 LRLCEVISEKNGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERCGGGG 174
           L L E ISE N G EEIESD+L+AF+VFDEN DGFIS DE+ NVLVRLGLWD +RC    
Sbjct: 61  LSLYESISEINRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLGLWDDKRCVRD- 120

Query: 175 GDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSSS 211
               RRMI AFD +LDG+LDF+EFKNM+  SSHSSS
Sbjct: 121 ---CRRMIGAFDVDLDGRLDFEEFKNMMNYSSHSSS 151

[Close]

BLAST of Sed0002588 vs. ExPASy TrEMBL
Match: A0A6J1FD73 (probable calcium-binding protein CML44 OS=Cucurbita moschata OX=3662 GN=LOC111443045 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 104/155 (67.10%), Postives = 122/155 (78.71%), Query Frame = 0


Query: 55  MAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEF 114
           M+P N++DLQRIFE+IDRN DGFVSIEELHWLLN+  G D IS+DLE L+GKS +D +EF
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRT-GVDFISDDLESLIGKSMIDFDEF 60

Query: 115 LRLCEVISEKNGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERCGGGG 174
           L L E ISE N G EEIESD+L+AF+VFDEN DGFIS DE+ NVLVRL LWD  RC    
Sbjct: 61  LSLYESISEINRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLELWDDRRCVRD- 120

Query: 175 GDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSS 210
               RRMI AFD +LDG+LDF+EFKNM+  SS+SS
Sbjct: 121 ---CRRMIGAFDVDLDGRLDFEEFKNMMNYSSNSS 150

[Close]

BLAST of Sed0002588 vs. ExPASy TrEMBL
Match: A0A6J1CD20 (probable calcium-binding protein CML44 OS=Momordica charantia OX=3673 GN=LOC111010552 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 3.6e-40
Identity = 93/156 (59.62%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 55  MAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEF 114
           M+PL ++DLQRIFE++D N DGF+S+EEL+ LL+ IG G  I +DLE L+GK K+D  EF
Sbjct: 7   MSPLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQ-ICDDLESLIGKCKLDFEEF 66

Query: 115 LRLCEVISEKN--GGEEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERCGG 174
           L L + ISE+N  G EEEIESD+L+AF+VFD+N DGFI  +E+ NVL RLGLWD ERCG 
Sbjct: 67  LSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEELRNVLARLGLWD-ERCGR 126

Query: 175 GGGDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHS 209
                   MI AFDTN DG+LDFQEFKN+++ +S+S
Sbjct: 127 D----CSSMIGAFDTNFDGRLDFQEFKNIMLSASNS 156

[Close]

BLAST of Sed0002588 vs. ExPASy TrEMBL
Match: A0A2N9GA67 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24170 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 86/157 (54.78%), Postives = 108/157 (68.79%), Query Frame = 0


Query: 55  MAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEF 114
           M+P+N+ DL RIFE +D+N DG VS+EEL+WLL +IG   +  E+LE +VGKS +DLNEF
Sbjct: 1   MSPINTNDLHRIFEKLDKNGDGLVSLEELNWLLEKIGVQIISQEELESIVGKSSLDLNEF 60

Query: 115 LRLCEVISEKNGG---------EEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLW 174
           L   + IS++N           EE  ESD++ AFKVFD NGDGFIS DE+ NVL RLGLW
Sbjct: 61  LSFHDSISKQNSSCSNEVVEEEEENEESDLVKAFKVFDLNGDGFISCDELQNVLSRLGLW 120

Query: 175 DYERCGGGGGDWSRRMIEAFDTNLDGKLDFQEFKNMI 203
           D        G   R MI  +DTNLDG+LDF+EFKNM+
Sbjct: 121 D-----ENSGRDCRSMIHVYDTNLDGQLDFEEFKNMM 152

[Close]

BLAST of Sed0002588 vs. ExPASy TrEMBL
Match: A0A1U8NWE1 (probable calcium-binding protein CML44 OS=Gossypium hirsutum OX=3635 GN=LOC107952579 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.5e-35
Identity = 89/171 (52.05%), Postives = 111/171 (64.91%), Query Frame = 0


Query: 53  SPMAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLN 112
           S M+PL+ TDLQR+FE +D+N DGFVS+EEL+WLL +IG      E+LE LVGK  ++L+
Sbjct: 32  SKMSPLSKTDLQRVFEKLDKNGDGFVSLEELNWLLQKIGSAQFSLEELEPLVGKPCLNLD 91

Query: 113 EFLRLCEVISE-----------------KNGGEEEIESDVLSAFKVFDENGDGFISSDEI 172
           EFL   E IS                   +GG EE +SD+  AFKVFD NGDGFIS +E+
Sbjct: 92  EFLFFYESISNPPAQGGDEEEEEEEELVTHGGGEEEDSDLAKAFKVFDLNGDGFISCEEL 151

Query: 173 GNVLVRLGLWDYERCGGGGGDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSS 207
             VL RLGLWD +      G   RRMI  +DTNLDG +DFQEFKNM++ SS
Sbjct: 152 ECVLGRLGLWDEK-----SGKDCRRMIWYYDTNLDGMVDFQEFKNMMLHSS 197

[Close]

BLAST of Sed0002588 vs. TAIR 10
Match: AT1G21550.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 118.2 bits (295), Expect = 7.7e-27
Identity = 61/153 (39.87%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 58  LNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELVGKSKVDLNEFLRL 117
           + + DL+R+F+++D+N DG V+++EL W+L+++G  +   ++LE +VGK  +DL+EFLR 
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 118 -CEVISEKNGGEEEI------ESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERC 177
             + + +  G ++ I      +  +  AF VFD NGDG+IS++E+ +VL RLG  +  + 
Sbjct: 66  YYDAVLDSKGSKKNIDVVADNDEAIARAFNVFDVNGDGYISAEELRDVLERLGFEEEAKA 125

Query: 178 GGGGGDWSRRMIEAFDTNLDGKLDFQEFKNMIM 204
              G     RMI   D NLDG +DF+EFKNMI+
Sbjct: 126 WDCG-----RMIRVHDKNLDGFVDFEEFKNMIL 153

[Close]

BLAST of Sed0002588 vs. TAIR 10
Match: AT4G20780.1 (calmodulin like 42 )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 70/174 (40.23%), Postives = 99/174 (56.90%), Query Frame = 0


Query: 58  LNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIG-GGDLISEDLEELV------GKSKVD 117
           LN+  LQRIF+  D+N DGF+++EEL   L ++G   DL   DL+  V      G + ++
Sbjct: 25  LNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADL--SDLKSTVESYIQPGNTGLN 84

Query: 118 LNEFLRLCEVISEK------NGGEE--------EIESDVLSAFKVFDENGDGFISSDEIG 177
            ++F  L + + +        GGE         E ESD+  AFKVFDENGDGFIS+ E+ 
Sbjct: 85  FDDFSSLHKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQ 144

Query: 178 NVLVRLGLWDYERCGGGGGDWSRRMIEAFDTNLDGKLDFQEFKNM----IMPSS 207
            VL +LGL +     GG  +   +MI + D N DG++DF EFKNM    ++PSS
Sbjct: 145 TVLKKLGLPE-----GGEMERVEKMIVSVDRNQDGRVDFFEFKNMMRTVVIPSS 191

[Close]

BLAST of Sed0002588 vs. TAIR 10
Match: AT5G44460.1 (calmodulin like 43 )

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-18
Identity = 65/175 (37.14%), Postives = 97/175 (55.43%), Query Frame = 0


Query: 41  EPKSFKSASVSQSPMAP-LNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISED 100
           E K     S S    +P LN+  L R+F+  D+N+DGF+++EEL   L+++ G D    D
Sbjct: 6   EKKKLSRQSSSFRLRSPSLNALRLHRVFDLFDKNNDGFITVEELSQALSRL-GLDADFSD 65

Query: 101 LEELV------GKSKVDLNEFLRLCEVISEKNGGEE------EIESDVLSAFKVFDENGD 160
           L+  V       K+ +  ++F  L + + E   G E        ESD+  AF VFDE+GD
Sbjct: 66  LKSTVDSFIKPDKTGLRFDDFAALHKTLDESFFGGEGSCCDGSPESDLEEAFNVFDEDGD 125

Query: 161 GFISSDEIGNVLVRLGLWDYERCGGGGGDWSRRMIEAFDTNLDGKLDFQEFKNMI 203
           GFIS+ E+  VL +LGL +      G  +   +MI + D+N DG++DF EFKNM+
Sbjct: 126 GFISAVELQKVLKKLGLPE-----AGEIEQVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]

BLAST of Sed0002588 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 85.5 bits (210), Expect = 5.6e-17
Identity = 56/171 (32.75%), Postives = 96/171 (56.14%), Query Frame = 0


Query: 47  SASVSQSPMAPLNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELV-- 106
           S S S +P   ++ ++L+R+F+  D+N DG ++ EEL+  L  + G  +  +DL +++  
Sbjct: 50  SPSSSSAPTKRIDPSELKRVFQMFDKNGDGRITKEELNDSLENL-GIYIPDKDLTQMIHK 109

Query: 107 ----GKSKVDLNEFLRL-CEVISEKNGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVL 166
               G   VD++EF  L   ++ E +   E  E D+  AF VFD++GDGFI+ +E+ +V+
Sbjct: 110 IDANGDGCVDIDEFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVM 169

Query: 167 VRLGLWDYERCGGGGGDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSSS 211
             LGL       G   D  ++MI   D + DG+++++EF  M+     SSS
Sbjct: 170 ASLGLKQ-----GKTLDGCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSSS 214

[Close]

BLAST of Sed0002588 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family )

HSP 1 Score: 82.8 bits (203), Expect = 3.6e-16
Identity = 53/158 (33.54%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 58  LNSTDLQRIFESIDRNSDGFVSIEELHWLLNQIGGGDLISEDLEELV------GKSKVDL 117
           ++ T+L+R+F+  D+N DG ++ +EL   L  + G  +  ++L +++      G   VD+
Sbjct: 1   MDPTELKRVFQMFDKNGDGTITGKELSETLRSL-GIYIPDKELTQMIEKIDVNGDGCVDI 60

Query: 118 NEFLRLCEVISEKNGGEEEIESDVLSAFKVFDENGDGFISSDEIGNVLVRLGLWDYERCG 177
           +EF  L + I ++   E+E E D+  AF VFD+NGDGFI+ DE+  VL  LGL       
Sbjct: 61  DEFGELYKTIMDE---EDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQ----- 120

Query: 178 GGGGDWSRRMIEAFDTNLDGKLDFQEFKNMIMPSSHSS 210
           G   D  ++MI+  D + DG+++++EF+ M+     +S
Sbjct: 121 GKTLDDCKKMIKKVDVDGDGRVNYKEFRQMMKGGGFNS 149

The following BLAST results are available for this feature:

BLAST of Sed0002588 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899375.1	4.2e-51	71.88	calmodulin-like protein 3 [Benincasa hispida]	[more]
XP_022976028.1	4.0e-49	69.23	probable calcium-binding protein CML44 [Cucurbita maxima]	[more]
KAG6592136.1	7.5e-48	67.95	Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7025009.1	9.7e-48	67.95	Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023536413.1	3.7e-47	67.74	probable calcium-binding protein CML44 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0002588 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPK5	1.1e-25	39.87	Probable calcium-binding protein CML44 OS=Arabidopsis thaliana OX=3702 GN=CML44 ...	[more]
Q9SVG9	1.8e-20	40.23	Calcium-binding protein CML42 OS=Arabidopsis thaliana OX=3702 GN=CML42 PE=1 SV=1	[more]
Q9FI19	5.4e-17	37.14	Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 ...	[more]
O22845	7.8e-16	32.75	Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2	[more]
Q0JC44	1.0e-15	34.62	Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Sed0002588 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKW9	1.9e-49	69.23	probable calcium-binding protein CML44 OS=Cucurbita maxima OX=3661 GN=LOC1114765...	[more]
A0A6J1FD73	1.5e-46	67.10	probable calcium-binding protein CML44 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1CD20	3.6e-40	59.62	probable calcium-binding protein CML44 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A2N9GA67	1.1e-36	54.78	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24170 PE=4 SV=1	[more]
A0A1U8NWE1	3.5e-35	52.05	probable calcium-binding protein CML44 OS=Gossypium hirsutum OX=3635 GN=LOC10795...	[more]

BLAST of Sed0002588 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21550.1	7.7e-27	39.87	Calcium-binding EF-hand family protein	[more]
AT4G20780.1	1.3e-21	40.23	calmodulin like 42	[more]
AT5G44460.1	3.8e-18	37.14	calmodulin like 43	[more]
AT2G43290.1	5.6e-17	32.75	Calcium-binding EF-hand family protein	[more]
AT1G05990.1	3.6e-16	33.54	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 177..205 e-value: 0.1 score: 21.7 coord: 62..90 e-value: 5.5E-4 score: 29.2 coord: 134..162 e-value: 5.3E-4 score: 29.3
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 63..83 e-value: 1.7E-4 score: 21.0
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 136..202 e-value: 4.9E-8 score: 33.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 179..208 score: 10.580154
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 58..93 score: 12.811786
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 130..165 score: 13.955498
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 138..203 e-value: 5.53961E-11 score: 54.0909
None	No IPR available	GENE3D	1.10.238.10		coord: 3..123 e-value: 4.8E-9 score: 37.8
None	No IPR available	GENE3D	1.10.238.10		coord: 124..165 e-value: 4.1E-8 score: 34.7
None	No IPR available	GENE3D	1.10.238.10		coord: 176..209 e-value: 1.8E-5 score: 26.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..56
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 55..206
None	No IPR available	PANTHER	PTHR10891:SF788	CALCIUM-BINDING PROTEIN CML44-RELATED	coord: 55..206
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 71..83
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 143..155
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 62..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002588.1	Sed0002588.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding