Sed0002539 (gene) Chayote v1

Overview
NameSed0002539
Typegene
OrganismSechium edule (Chayote v1)
Description54S ribosomal protein L51, mitochondrial
LocationLG12: 3485709 .. 3489411 (-)
RNA-Seq ExpressionSed0002539
SyntenySed0002539
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACATAGCAAACCTCAATCGCTAAAACCCGTCTCACTCTCGAGCCTTAGTCGGCGTTGGTGTATCGTGGGTGGCCGCATCCTCCGTTTCAGGTATGTTCTTCGTTCTCATTCAAACCATAGAGCCACAATTCTCATCTGTCAATTTTGAATGTTCATGTTCATGGAGCTTCTTAAGCTTATGTTTTGCCAAATTTGTGGAGGGTTTTGGTTTTCAAAGCCTTACGATTTTTTATCCATGGAGTCTGTGAATCGTTCGGCACTTTTTTATTTGTTCGTTAACATTTCACATTTGGGCTCTGGGTTGTGTGAGTTTTGTTCGCATTCGTTTGTTTTTCTCTGGGTTTTTTTTTTTTTTTTTGAAAATTTCCATTGTTGTAGATATAAAGATGGCTTTGCGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGAGGAAGCAGTAGGGGTATCAGGTTTGTTTGGGATTCTGGATCATTAGCTGCTTGATTATTTCATTACTACTTAGATTCTTGATTTAAGTTTTGACCTGAAAATGCTTTCTATTTCCATGTACAATTGCCTTGGTATGTGCCTGGGTGCCTCGGGTATAGTGGGGAAGCTCTGATTCCCGGTTATAAAAAAAACAAATTCATGTCTACCGGTGTTTGACCTAGGAATGGGCGTGGTTAGCTCGGTTATAGTGGCGTGAAACTCTGATTTTCTTGTTTCCAAAATATATATAAAAAATTCATGTTTGATCATAATTATTTCATACTCAATTTGCTTTCTTCTAGCTTTCTGGTTTGAATTGTGTAAAAAGTTGCTTGGATTCTTAGAAACGAGTTGTGCTTGGGTGGGTTTGAACTAGGATTTTGTCCGGGCCAACTTGCGCGCACCTCGACTATTGTCACGGGGCATACCGCCTAACCTACAACATTTGAATGCTAAGAAAACCCGTAGGAAATTAATCCCTAGGTAGGTGGCCACCATGGGGTTTGAACCCATCACCTTATGCACCCCAAGACCCTCTTTGATCAATTGAGTCATCCCATGATGGTTTTGAACTGGGGTTCTTGGAGAGTGCAGCAAGGCCCGCCCTCTTTTCTTTTTGGATAGGAAACAATTTCATTGATTCATGAAATTACAATATAGATAAAAAATTACGAAAGATCATATAAGCGATCTCCAGTAATTAAGTAGTGTTTTCACCTTAAGCTGAATTCCTTTATTTTTTGCCTAACGTAAAACCTAGAATATCATCTTTAAGAAAATTGATAACATTTGGTCTGCCATTGGTGTTTTAGAGGATTAACCAAACCATAGCACCAATAAACTCTTAAAATTACAGGGATGAAACTGAAATCTGCATCATATGGAGTATGGACTATAATGATAATTTAACTTTATGGTTATATTATCTAATGGATTACATTCTGGTTTTTAATTCCTAATTTGAAGTTCGTGTGATTTATATTGGTCGAGTAGGTACTAATTCTTAATAGTTTTCTGCGTAGCTTTGATTATATAAGTTGTTGTCCTTAAAGCAGATTGGCTTTTTCCCCCCACATATCAGTTTAGTATCAATTATCAAACTTTGAGTGCTCCATGGGAAGTCTTTTGTCCATTGTCGCATGAATGCATGTGGAAAGAACTTTGGGCCTGGATCTCTAATCTGTTTAGCAATCATTCTTTAAGTCATATTTTTTTGGATTGAAAGCCATTTTTTAAACTCCTTTCTTCTTTGTGGGCATTCTTTTGTTTGCCTTCGAATCTTTCATTTTTCTCTCAATGAAAGTCTGAATGTTTATAAAAAAAAAAATAGTAAGAAGGAGCTTATACTAGTTTGAACAAGAAAATTCATCATGATATATTCCTTGTAAAAGTAATGTTCAGTGCTTTCATTAGCTTATTTGTTAGGAACTATCTTATGCAAAATCTAAAAGATTTGAAATTACGACGTACTATGTATCATCCATGTTCTATGTATCAAATATGGGTGCACTTTCTTAGTCATCCTTCTTCGTATGTTAACTTGCATCTGTTATCCTTCTTTTAAATTGTGACATTGAAGCCATCTATTATCAGGTAAATAGCCGTTTATACCTATTTTTAACTAGAATGAACTATTTTCTGAGTGTGTTATTGAGAATATCATTTTAAAAGTCCCCAAGGGTTGACGTAGTAGTTGAAGACTTGGGCTTTGAGGGTATGCTCCCCTCAAGGTCCCGGGTTCGAGACTCACCTGTGGCTGTGATATTACTCTTTCGATGTCTTTGGTGCCTGCCTCAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAAAAATATCATTTTAATAAAGTGTACCATGCCAGTCACATTTTGATCTTGCATTTATATCAAACAAATGTCTATATTATCCGGTCCCCAAAGGGAGGCATAGTGGTTGAAGACTTGGGCTTTGAAGGTATGCTCCCTTCAAGGTCCCAGGTTTGAGACTCAACTGTGACATTACTCCTTCAATATCTCCCGGTGCCTGGCCTAGGGACGGACGTGGTTACCCTTGTTTAAAAAAAATGTCTATATTATCCATCAATTCATGTGTTATCACTATGGAAATGAATTTTCCTCAATCCTTTTCCTGCGAAAAAGGCAATCTCTAGTAACTAAGATGTGATGAGTTCAATCCATGGCAGCCACCTATCTAGAAATTAATTTCCTACTGGCATTCTTGACATCCAAATATTATAGGATAAGACAATGTGTCCTTGAGAATAGTCTAAGTGTGGATAAGCTGACTTGGTCGCTCACTGATATATAAAATAATAATAAATAAATTAAGGCAATCCTTTTCTGCCCAGTCATGAACCGCCCTGTTTGGAGCCATGGTCTAACCCAGGAGAGCTTCAAATCCTCTTGCAGATTTTCTACCGCATGGTTCAATAAAATAGTATAACATCCTGCTTTCATTTTCTAACTGCCTACTCAATCTCAGGCAGTTTCCAAGGAATAAGCTCGATTCCTTTATAGTTCCATTTGATTATTGATTTTTATTATTATTTATCTTTTGTAATTAACTAGATACTGTTTCACATGAAGATATATTTTCCTGAATGATCTGTATCTTATCTTTGAATGTGCAGGGCATTTATGGACAAGGAATTGCCAACTTTCAAGGAGAAGAATCCTCAGCTCGAAGTCGTTACTGAACTCATTCGCGGCCAGCATCCACACCTGAAGGCCTTCTATAGTAATTCTCTCTCTCTCTTAACTTCTTGCTGTTATAATTTATAAGTGTTTCAACATTTGCTCTCCATATTCCATCACCTTCTCAGAAAACAAGAATCAACGGGTGGTATGCGTGAAGAATTTGGATCCGGAAATCATAAATTTGCAGGCAACGAGGCTAAGGAACGCATTGGGGCGAAAGGTCATAAAACTGAGGACGAGACATGTAACCAAAAACCCGAGCGTGCAAGGTACGTGGAACACTGGTGTAAGATTTTGAGGCCTGGATGATTCCCTGAAGTGCTGGATTTTGTTTTGAGGTTGTTTTTTTTCAATCAACAATAAGATGTTGAAACCAGACTAATATATAGAGTAGTTTGAGTCTGTTGTCCCATGCAAACTTTTTTGGTTGTTATTGTTCCAATGCTCTGCATACTCTCTCTGAAGAAAGTCTTACTGAGAAACATGCAACAGAAGAAAGTCTTACTGAGAAACATGCAACA

mRNA sequence

GACATAGCAAACCTCAATCGCTAAAACCCGTCTCACTCTCGAGCCTTAGTCGGCGTTGGTGTATCGTGGGTGGCCGCATCCTCCGTTTCAGATATAAAGATGGCTTTGCGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGAGGAAGCAGTAGGGGTATCAGGGCATTTATGGACAAGGAATTGCCAACTTTCAAGGAGAAGAATCCTCAGCTCGAAGTCGTTACTGAACTCATTCGCGGCCAGCATCCACACCTGAAGGCCTTCTATAAAAACAAGAATCAACGGGTGGTATGCGTGAAGAATTTGGATCCGGAAATCATAAATTTGCAGGCAACGAGGCTAAGGAACGCATTGGGGCGAAAGGTCATAAAACTGAGGACGAGACATGTAACCAAAAACCCGAGCGTGCAAGGTACGTGGAACACTGGTGTAAGATTTTGAGGCCTGGATGATTCCCTGAAGTGCTGGATTTTGTTTTGAGGTTGTTTTTTTTCAATCAACAATAAGATGTTGAAACCAGACTAATATATAGAGTAGTTTGAGTCTGTTGTCCCATGCAAACTTTTTTGGTTGTTATTGTTCCAATGCTCTGCATACTCTCTCTGAAGAAAGTCTTACTGAGAAACATGCAACAGAAGAAAGTCTTACTGAGAAACATGCAACA

Coding sequence (CDS)

ATGGCTTTGCGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGAGGAAGCAGTAGGGGTATCAGGGCATTTATGGACAAGGAATTGCCAACTTTCAAGGAGAAGAATCCTCAGCTCGAAGTCGTTACTGAACTCATTCGCGGCCAGCATCCACACCTGAAGGCCTTCTATAAAAACAAGAATCAACGGGTGGTATGCGTGAAGAATTTGGATCCGGAAATCATAAATTTGCAGGCAACGAGGCTAAGGAACGCATTGGGGCGAAAGGTCATAAAACTGAGGACGAGACATGTAACCAAAAACCCGAGCGTGCAAGGTACGTGGAACACTGGTGTAAGATTTTGA

Protein sequence

MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF
Homology
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BLAST of Sed0002539 vs. NCBI nr
Match: XP_022158383.1 (54S ribosomal protein L51, mitochondrial [Momordica charantia])

HSP 1 Score: 232.3 bits (591), Expect = 2.2e-57
Identity = 110/119 (92.44%), Postives = 112/119 (94.12%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFMD +LP FKEKNPQLEVVTELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
           FYKN N+RVVCVKNLDPE INL A RLRNALGRKVIKLRTRHVTKNPSVQGTWNT VRF
Sbjct: 61  FYKNNNERVVCVKNLDPEEINLHAVRLRNALGRKVIKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of Sed0002539 vs. NCBI nr
Match: XP_028763295.1 (54S ribosomal protein L51, mitochondrial [Prosopis alba] >XP_028763296.1 54S ribosomal protein L51, mitochondrial [Prosopis alba])

HSP 1 Score: 222.2 bits (565), Expect = 2.3e-54
Identity = 104/119 (87.39%), Postives = 111/119 (93.28%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFM+ +LP FKE+NPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMESQLPVFKERNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
           FYKNKNQRVVCVKN+DP+ I L ATRLRNALGRKVIKLRTRHVTK+PSVQGTW T V+F
Sbjct: 61  FYKNKNQRVVCVKNMDPDDILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTDVKF 119

[Close]
BLAST of Sed0002539 vs. NCBI nr
Match: XP_022979453.1 (54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 221.5 bits (563), Expect = 3.9e-54
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQL+KLIVSYCDWGGSSRGIRAFMD ELP F+EKNPQL++VTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
           FYK+ N RV+CVKN+DPE I+L ATRLRNALGRKV+KLRTRHVTKNPS QGTWNT VRF
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTDVRF 119

[Close]
BLAST of Sed0002539 vs. NCBI nr
Match: XP_028084137.1 (54S ribosomal protein L51, mitochondrial isoform X2 [Camellia sinensis] >XP_028084138.1 54S ribosomal protein L51, mitochondrial isoform X2 [Camellia sinensis] >KAF5951050.1 hypothetical protein HYC85_013043 [Camellia sinensis])

HSP 1 Score: 221.5 bits (563), Expect = 3.9e-54
Identity = 105/119 (88.24%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFM+  LP FKE NPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMESNLPAFKENNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
           FYKNKNQRVVCVKNL PE I LQATRLRNALGRKV+KLRTRHVTK+PSVQGTW T V+F
Sbjct: 61  FYKNKNQRVVCVKNLSPEDILLQATRLRNALGRKVVKLRTRHVTKHPSVQGTWTTEVKF 119

[Close]
BLAST of Sed0002539 vs. NCBI nr
Match: KAG7029113.1 (mrpl51 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.5 bits (563), Expect = 3.9e-54
Identity = 105/119 (88.24%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFMD +LP FK+KNPQLEVV ELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
           FYKN NQRVVCV+NLD E I+L ATRLRNALGRKVIKL+TRHVTKNPSVQGTW T VRF
Sbjct: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDVRF 119

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BLAST of Sed0002539 vs. ExPASy Swiss-Prot
Match: Q758S3 (54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MRPL51 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.0e-12
Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 0 

Query: 6   VWQLQKLIVSYCDWGGSSRGIRAFM-DKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKN 65
           ++  +K+ + YC+WGGSS+G+R F+  K L  + EK PQ++    + +  HP LKA Y N
Sbjct: 20  IFPCKKITLQYCNWGGSSQGLRDFLTSKRLAKWAEKYPQIQFEV-VAKAGHPVLKAEYIN 79

Query: 66  KNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTK-------NPSVQGTWN 115
              + +CV+NL+ + + L+   LR + G ++     RH  K       N SV+G W+
Sbjct: 80  GLNKAICVRNLNVDHVELKLKLLRESSGAQL-----RHYPKNANVLSLNQSVRGVWS 130

[Close]
BLAST of Sed0002539 vs. ExPASy Swiss-Prot
Match: Q9UUC8 (54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl51 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.7e-12
Identity = 30/105 (28.57%), Postives = 62/105 (59.05%), Query Frame = 0 

Query: 10  QKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRV 69
           +++  SYC+WGGSS+G++ F+  +L +  +++  +E      +G+HP ++A+Y    ++V
Sbjct: 24  RRIEFSYCNWGGSSKGMKEFLSTKLESLAKESQDVEFHVTNRQGKHPLIRAYYNTGREKV 83

Query: 70  VCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWN 115
           +C + +    I  +A   R++ G K   ++    + NPSV+G W+
Sbjct: 84  ICTRKMSASSIFQKAILCRDSDGLKPRLIKYPVESTNPSVRGIWS 128

[Close]
BLAST of Sed0002539 vs. ExPASy Swiss-Prot
Match: Q06090 (54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL51 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.2e-10
Identity = 37/115 (32.17%), Postives = 70/115 (60.87%), Query Frame = 0 

Query: 6   VWQLQKLIVSYCDWGGSSRGIRAFM-DKELPTFKEKNP--QLEVVTELIRGQHPHLKAFY 65
           V+  +K+ + +C+WGGSS G+R F+  K L  + ++ P  Q EV+    +  HP L+A Y
Sbjct: 20  VFPCRKITLQFCNWGGSSEGMRKFLTSKRLDKWGQEFPWIQFEVMR---KSGHPLLRAEY 79

Query: 66  KNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRH---VTKNPSVQGTWN 115
            N  ++V+CV+NL+ + +  +   L+++ G  +++ RT++    + N SV+G W+
Sbjct: 80  TNGREKVICVRNLNIDNVENKLKLLKDSDG-DILRRRTKNDNVESLNSSVRGIWS 130

[Close]
BLAST of Sed0002539 vs. ExPASy Swiss-Prot
Match: Q99N89 (39S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.8e-08
Identity = 38/110 (34.55%), Postives = 53/110 (48.18%), Query Frame = 0 

Query: 4   RGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYK 63
           R V QLQ+L +S      SSRG R F+++E+  F  +NP + V         P + A Y 
Sbjct: 21  RYVQQLQRLSLSLSRDAPSSRGAREFVEREVTDFARRNPGVVVYVNPRPCAMPRIVAEYL 80

Query: 64  NKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTW 114
           N   R   V +   E I     +L +  G  VI++R    T NPS+QG W
Sbjct: 81  NGAVREENVNSKSVEEIKSLVQKLADQSGLDVIRIRKPFHTDNPSIQGQW 130

[Close]
BLAST of Sed0002539 vs. ExPASy Swiss-Prot
Match: Q8N983 (39S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.6e-08
Identity = 37/111 (33.33%), Postives = 54/111 (48.65%), Query Frame = 0 

Query: 4   RGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYK 63
           R V QLQ+L  S    G SSRG R F+++E+  F  +NP + +         P + A Y 
Sbjct: 21  RYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYL 80

Query: 64  NKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWN 115
           N   R   +     E I+    +L +  G  VI++R    T NPS+QG W+
Sbjct: 81  NGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWH 131

[Close]
BLAST of Sed0002539 vs. ExPASy TrEMBL
Match: A0A6J1DVX7 (54S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024881 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 110/119 (92.44%), Postives = 112/119 (94.12%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFMD +LP FKEKNPQLEVVTELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
           FYKN N+RVVCVKNLDPE INL A RLRNALGRKVIKLRTRHVTKNPSVQGTWNT VRF
Sbjct: 61  FYKNNNERVVCVKNLDPEEINLHAVRLRNALGRKVIKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of Sed0002539 vs. ExPASy TrEMBL
Match: A0A6J1IW90 (54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479166 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQL+KLIVSYCDWGGSSRGIRAFMD ELP F+EKNPQL++VTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
           FYK+ N RV+CVKN+DPE I+L ATRLRNALGRKV+KLRTRHVTKNPS QGTWNT VRF
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTDVRF 119

[Close]
BLAST of Sed0002539 vs. ExPASy TrEMBL
Match: A0A7J7HDQ5 (L51_S25_CI-B8 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_013043 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54
Identity = 105/119 (88.24%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFM+  LP FKE NPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMESNLPAFKENNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
           FYKNKNQRVVCVKNL PE I LQATRLRNALGRKV+KLRTRHVTK+PSVQGTW T V+F
Sbjct: 61  FYKNKNQRVVCVKNLSPEDILLQATRLRNALGRKVVKLRTRHVTKHPSVQGTWTTEVKF 119

[Close]
BLAST of Sed0002539 vs. ExPASy TrEMBL
Match: A0A445AZB2 (L51_S25_CI-B8 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g056593 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.3e-54
Identity = 103/119 (86.55%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYC+WGGSSRGIRAFM+ ELP FKEKNPQLEVVTELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCNWGGSSRGIRAFMESELPVFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
           FYKNKN+RV+CVKN+DPE +   ATRLRNALGRKVIKLRTRHVTK PSVQGTW T +RF
Sbjct: 61  FYKNKNERVICVKNMDPEDVLHHATRLRNALGRKVIKLRTRHVTKRPSVQGTWTTALRF 119

[Close]
BLAST of Sed0002539 vs. ExPASy TrEMBL
Match: A0A1U8IMF4 (54S ribosomal protein L51, mitochondrial-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107896795 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.3e-54
Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQL+KLIVSYCDWGGSSRGIRAFM+ ELPTFKEKNPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMESELPTFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
           FYKNKN+RVVCVKN+ PE I L ATRLRNALGRKV+KL+TRHVTK+PSVQGTW T V+F
Sbjct: 61  FYKNKNERVVCVKNMTPEDILLYATRLRNALGRKVVKLKTRHVTKHPSVQGTWTTDVKF 119

[Close]
BLAST of Sed0002539 vs. TAIR 10
Match: AT3G59650.1 (mitochondrial ribosomal protein L51/S25/CI-B8 family protein )

HSP 1 Score: 207.2 bits (526), Expect = 7.2e-54
Identity = 93/119 (78.15%), Postives = 108/119 (90.76%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+ ELP  KEKNPQLEV+TEL RGQHP+LK 
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 61  FYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF 120
            Y+N+N+RVVCVKN+DPE + L ATRLRN+LGRKV+KLRTRHVTK+PSVQGTW T V+F
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTTAVKF 119

[Close]
BLAST of Sed0002539 vs. TAIR 10
Match: AT3G59650.2 (mitochondrial ribosomal protein L51/S25/CI-B8 family protein )

HSP 1 Score: 191.8 bits (486), Expect = 3.1e-49
Identity = 93/146 (63.70%), Postives = 107/146 (73.29%), Query Frame = 0 

Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKA 60
           MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+ ELP  KEKNPQLEV+TEL RGQHP+LK 
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 61  FYK---------------------------NKNQRVVCVKNLDPEIINLQATRLRNALGR 120
            Y                            N+N+RVVCVKN+DPE + L ATRLRN+LGR
Sbjct: 61  IYSMYISPLLNTILIQRLLILAISLAQFIGNRNERVVCVKNMDPEEVLLNATRLRNSLGR 120

The following BLAST results are available for this feature:
BLAST of Sed0002539 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158383.12.2e-5792.4454S ribosomal protein L51, mitochondrial [Momordica charantia][more]
XP_028763295.12.3e-5487.3954S ribosomal protein L51, mitochondrial [Prosopis alba] >XP_028763296.1 54S rib... [more]
XP_022979453.13.9e-5484.8754S ribosomal protein L51, mitochondrial-like [Cucurbita maxima][more]
XP_028084137.13.9e-5488.2454S ribosomal protein L51, mitochondrial isoform X2 [Camellia sinensis] >XP_0280... [more]
KAG7029113.13.9e-5488.24mrpl51 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Sed0002539 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q758S33.0e-1234.1954S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 /... [more]
Q9UUC88.7e-1228.5754S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 97... [more]
Q060906.2e-1032.1754S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATC... [more]
Q99N895.8e-0834.5539S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1... [more]
Q8N9837.6e-0833.3339S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 ... [more]
BLAST of Sed0002539 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DVX71.1e-5792.4454S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A6J1IW901.9e-5484.8754S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A7J7HDQ51.9e-5488.24L51_S25_CI-B8 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_01... [more]
A0A445AZB23.3e-5486.55L51_S25_CI-B8 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g0... [more]
A0A1U8IMF44.3e-5486.5554S ribosomal protein L51, mitochondrial-like isoform X2 OS=Gossypium hirsutum O... [more]
BLAST of Sed0002539 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G59650.17.2e-5478.15mitochondrial ribosomal protein L51/S25/CI-B8 family protein [more]
AT3G59650.23.1e-4963.70mitochondrial ribosomal protein L51/S25/CI-B8 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 18..91
e-value: 3.2E-16
score: 69.9
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 26..76
e-value: 1.3E-11
score: 44.2
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..118
e-value: 2.6E-42
score: 146.1
IPR03992739S ribosomal protein L43/54S ribosomal protein L51PANTHERPTHR2139639S RIBOSOMAL PROTEIN L43coord: 1..116
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 8..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0002539.1Sed0002539.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032543 mitochondrial translation
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome