Homology
BLAST of Sed0002514 vs. NCBI nr
Match:
XP_022134864.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia] >XP_022134865.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia] >XP_022134866.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia])
HSP 1 Score: 1338.9 bits (3464), Expect = 0.0e+00
Identity = 696/906 (76.82%), Postives = 782/906 (86.31%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTSNLD----EEEEERLRDRKEREQLEKNLRQRDAVGTK-- 61
E K + + E+ V+R TS+ D E EEERLRD++EREQLE+N+R+RDA GT+
Sbjct: 148 EDDNKESVLEREDRQVRRRTTSSEDDDGYESEEERLRDQREREQLEQNIRERDAAGTRKL 207
Query: 62 ---NLFKKERSKGV-----VGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF--- 121
L +KE + + + + I LRK+SRQEYL +RE+KK++EIR++IE++++
Sbjct: 208 TEPKLSRKEEDEAIRRSKALENDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFE 267
Query: 122 -QPKRDRDEVIKRYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQR 181
+ + RYKK++YELV + D D YRMPEAYD GV NQDKRF+VAMQR
Sbjct: 268 GVKLTEAEYRELRYKKEIYELVKKRTDEADDIDEYRMPEAYDQEGGV-NQDKRFAVAMQR 327
Query: 182 YTDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVM 241
Y DS DK WEEHQ+ KATMKFGSKNKK++S D+Y+FVFEDQIEFIK SVM
Sbjct: 328 YRDSGTADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVM 387
Query: 242 ESDEFL-KAESVEMSKSNARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGS 301
E DEF+ + E+ + KS A+SALEKLQEERKTLPIYPYRDQLLQA+NDYQ+LVIVGETGS
Sbjct: 388 EGDEFVDERETESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGS 447
Query: 302 GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCT 361
GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCT
Sbjct: 448 GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCT 507
Query: 362 SDKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLK 421
SDKTVLKYMTDGMLLREFL EPDLASYSVI+VDEAHERTLSTDVLFGLVKDIARFRPDLK
Sbjct: 508 SDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLK 567
Query: 422 LLISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKP 481
LLISSATLDAEKFSDYFD APIFKIPGRRYPVEI FTKAPE DYLDAAIVT LQIH++KP
Sbjct: 568 LLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTKP 627
Query: 482 AGDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGA 541
GDILVFLTGQEEIE AE I+KHR RGLGTKIAELIICP+YANLP+ELQAKIFEPTP GA
Sbjct: 628 PGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGA 687
Query: 542 RKVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCG 601
RKV+LATNIAETSLTIDGIKYVIDPGF K+KSYNP+T MESLQV PISKASANQRAGR G
Sbjct: 688 RKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSG 747
Query: 602 RTGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCE 661
RTGPGMCFRLYT+++Y +E+EDN PEIQRTNLANVVLTLKSLGI+DL FDFMDQPP E
Sbjct: 748 RTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSE 807
Query: 662 ALLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAML 721
ALL+ALELL++L ALNK GELTKLGRRMAEFPLDPMLSKM+VASEKFKCS+E ISIAAML
Sbjct: 808 ALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEVISIAAML 867
Query: 722 SVDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVR 781
S+ SIFYRPK+KQVHADNA+MNFH GNVGDHIAL VYNSWRETNYSTQWCYENYIQVR
Sbjct: 868 SIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVR 927
Query: 782 SMKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHP 841
SMKRARDIR+QLEGLL+RVEIELT+N NDL+AIKKTI+SG+FPH+ KLQK+GSY+T+KHP
Sbjct: 928 SMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHP 987
Query: 842 QTVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLC 881
QTVHIHPSSGL Q P+W++YH+LVCTS+EYMRQVTELKPEWLVEIAPH+Y LKDVEDL
Sbjct: 988 QTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLS 1047
BLAST of Sed0002514 vs. NCBI nr
Match:
XP_038879655.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879656.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879657.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879658.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879659.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879660.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida])
HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 697/905 (77.02%), Postives = 778/905 (85.97%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTSNLD---EEEEERLRDRKEREQLEKNLRQRDAVGTKNLF 61
E K + E VKR +S+ D E EEERLRD++EREQLE+N+R+RDA GTK L
Sbjct: 137 EDDEKESAIERENRQVKRRASSSEDDGSESEEERLRDQREREQLEQNMRERDAAGTKKLT 196
Query: 62 KKE----------RSKGVVGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF---- 121
+++ R + N I LRK+SRQEYL +RE+KK++EIR++IE++++
Sbjct: 197 EQKLSRKEEEEAIRRSEALENNGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEG 256
Query: 122 QPKRDRDEVIKRYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQRY 181
+ + RYKK++YELV + D + YRMPEAYD GV NQDKRF+VA+QRY
Sbjct: 257 VKLTEAEYRELRYKKEIYELVKKRTDEADDINEYRMPEAYDQEGGV-NQDKRFAVALQRY 316
Query: 182 TDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVME 241
DS DK WEEHQ+ KATMKFGSKNKK+AS D+Y+FVFEDQIEFIK SVME
Sbjct: 317 RDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQAS-DDYQFVFEDQIEFIKASVME 376
Query: 242 SDEFLKAESVE-MSKSNARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGSG 301
DEF+ E + KS A+SALEKLQEERKTLPIYPYRDQLLQA+NDYQ+LVIVGETGSG
Sbjct: 377 GDEFVDERQTESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 436
Query: 302 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 361
KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 437 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 496
Query: 362 DKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKL 421
DKTVLKYMTDGMLLREFL EPDLASYSVI+VDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 497 DKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 556
Query: 422 LISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPA 481
LISSATLDAEKFSDYFD APIFKIPGRRYPVEI FTKAPE DYLDAAIVT LQIH++KP
Sbjct: 557 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 616
Query: 482 GDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGAR 541
GDILVFLTGQEEIE AE I+KHR RGLGTKIAELIICP+YANLP+ELQAKIFEPTP GAR
Sbjct: 617 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 676
Query: 542 KVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGR 601
KV+LATNIAETSLTIDGIKYVIDPGF K+KSYNP+T ME+LQV PISKASANQRAGR GR
Sbjct: 677 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 736
Query: 602 TGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEA 661
TGPGMCFRLYT+++Y +E+EDN PEIQRTNLANVVLTLKSLGI+DL FDFMDQPP EA
Sbjct: 737 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 796
Query: 662 LLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLS 721
LL+ALELL++L ALNK GELTKLGRRMAEFPLDPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 797 LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 856
Query: 722 VDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVRS 781
+ SIFYRPK+KQVHADNA+MNFH GNVGDHIAL VYNSWRETNYSTQWCYENYIQVRS
Sbjct: 857 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 916
Query: 782 MKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHPQ 841
MKRARDIR+QLEGLL+RVEIELT+N NDL+AIKKTI+SGFFPH+AKLQK+GSY+T+KHPQ
Sbjct: 917 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 976
Query: 842 TVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQ 881
TVHIHPSSGL Q P+W++YH+LVCTS+EYMRQVTELKPEWLVEIAPH+Y LKDVEDL
Sbjct: 977 TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1036
BLAST of Sed0002514 vs. NCBI nr
Match:
XP_008453258.1 (PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo] >XP_008453259.1 PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo])
HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 697/905 (77.02%), Postives = 778/905 (85.97%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTSNLD---EEEEERLRDRKEREQLEKNLRQRDAVGTKNLF 61
E K + E VKR +S+ D E EEERLRD++EREQLE+N+R+RDA GTK L
Sbjct: 138 EDDEKESALERENRQVKRRASSSEDDSSESEEERLRDQREREQLERNIRERDAAGTKKLT 197
Query: 62 KKE----------RSKGVVGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF---- 121
+++ R + N I LRK+SRQEYL +RE+KK++EIR++IE++++
Sbjct: 198 EQKLSRKEEEEAIRRSEALENNGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEG 257
Query: 122 QPKRDRDEVIKRYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQRY 181
D + RYKK++YELV + D + YRMPEAYD GV NQDKRF+VAMQRY
Sbjct: 258 VKLTDAEYRELRYKKEIYELVKKRTDEADDVNEYRMPEAYDQEGGV-NQDKRFAVAMQRY 317
Query: 182 TDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVME 241
DS DK WEEHQ+ KATMKFGSKNKK++S D+Y+FVFEDQIEFIK SVME
Sbjct: 318 RDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVME 377
Query: 242 SDEFLKAESVE-MSKSNARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGSG 301
DEF+ E + KS A+SALEKLQEERKTLPIYPYRDQLLQA+NDYQ+LVIVGETGSG
Sbjct: 378 GDEFVDERQTESLEKSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 437
Query: 302 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 361
KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 438 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 497
Query: 362 DKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKL 421
DKTVLKYMTDGMLLREFL EPDLASYSVI+VDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 498 DKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 557
Query: 422 LISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPA 481
LISSATLDAEKFSDYFD APIFKIPGRRYPVEI FTKAPE DYLDAAIVT LQIH++KP
Sbjct: 558 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 617
Query: 482 GDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGAR 541
GDILVFLTGQEEIE AE I+KHR RGLGTKIAELIICP+YANLP+ELQAKIFEPTP GAR
Sbjct: 618 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGAR 677
Query: 542 KVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGR 601
KV+LATNIAETSLTIDGIKYVIDPGF K+KSYNP+T ME+LQV PISKASANQRAGR GR
Sbjct: 678 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 737
Query: 602 TGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEA 661
TGPGMCFRLYT+++Y +E+EDN PEIQRTNLANVVLTLKSLGI+DL FDFMDQPP EA
Sbjct: 738 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 797
Query: 662 LLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLS 721
LL+ALELL++L ALNK GELTKLGRRMAEFPLDPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 798 LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 857
Query: 722 VDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVRS 781
+ SIFYRPK+KQVHADNA+MNFH GNVGDHIAL VYNSWRETN+STQWCYENYIQVRS
Sbjct: 858 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNFSTQWCYENYIQVRS 917
Query: 782 MKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHPQ 841
MKRARDIR+QLEGLL+RVEIELT+N NDL+AIKKTI+SGFFPH+AKLQK+GSY+T+KHPQ
Sbjct: 918 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTVKHPQ 977
Query: 842 TVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQ 881
TVHIHPSSGL Q P+W++YH+LVCTS+EYMRQVTELKPEWLVEIAPH+Y LKDVEDL
Sbjct: 978 TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1037
BLAST of Sed0002514 vs. NCBI nr
Match:
XP_011660328.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis sativus] >KGN63716.1 hypothetical protein Csa_013602 [Cucumis sativus])
HSP 1 Score: 1334.7 bits (3453), Expect = 0.0e+00
Identity = 690/906 (76.16%), Postives = 781/906 (86.20%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTSNLDEE----EEERLRDRKEREQLEKNLRQRDAVGTKNL 61
+ +++ +E + +R R S+ ++E EEERLRD++EREQLE+N+R+RDA GTK L
Sbjct: 139 DDEKESALERENRQVKRRQRASSSEDESSESEEERLRDQREREQLERNIRERDAAGTKKL 198
Query: 62 FKKE----------RSKGVVGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF--- 121
+++ R + + I LRK+SRQEYL +RE+KK++EIR++IE++++
Sbjct: 199 TEQKLSRKEEEEAIRRSEALENDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFE 258
Query: 122 -QPKRDRDEVIKRYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQR 181
D + +YKK++YELV + D + YRMPEAYD GV NQDKRF+VAMQR
Sbjct: 259 GVKLTDAEYRELKYKKEIYELVKKRTDEADDINEYRMPEAYDQEGGV-NQDKRFAVAMQR 318
Query: 182 YTDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVM 241
Y DS DK WEEHQ+ KATMKFGSKNKK++S D+Y+FVFEDQIEFIK SVM
Sbjct: 319 YRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVM 378
Query: 242 ESDEFLKAESVE-MSKSNARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGS 301
E DEF+ E + KS A+SALEKLQEERKTLPIYPYRDQLLQA+NDYQ+LVIVGETGS
Sbjct: 379 EGDEFVDERQTESLEKSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGS 438
Query: 302 GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCT 361
GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCT
Sbjct: 439 GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCT 498
Query: 362 SDKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLK 421
SDKTVLKYMTDGMLLREFL EPDLASYSV++VDEAHERTLSTDVLFGLVKDIARFRPDLK
Sbjct: 499 SDKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDVLFGLVKDIARFRPDLK 558
Query: 422 LLISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKP 481
LLISSATLDAEKFSDYFD APIFKIPGRRYPVEI FTKAPE DYLDAAIVT LQIH++KP
Sbjct: 559 LLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKP 618
Query: 482 AGDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGA 541
GDILVFLTGQEEIE AE I+KHR RGLGTKIAELIICP+YANLP+ELQAKIFEPTP GA
Sbjct: 619 PGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPDGA 678
Query: 542 RKVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCG 601
RKV+LATNIAETSLTIDGIKYVIDPGF K+KSYNP+T ME+LQV PISKASANQRAGR G
Sbjct: 679 RKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSG 738
Query: 602 RTGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCE 661
RTGPGMCFRLYT+++Y +E+EDN PEIQRTNLANVVLTLKSLGI+DL FDFMDQPP E
Sbjct: 739 RTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSE 798
Query: 662 ALLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAML 721
ALL+ALELL++L ALNK GELTKLGRRMAEFPLDPMLSKM+VASEKFKCS+E ISIAAML
Sbjct: 799 ALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAML 858
Query: 722 SVDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVR 781
S+ SIFYRPK+KQVHADNA+MNFH GNVGDHIAL VYNSWRETNYSTQWCYENYIQVR
Sbjct: 859 SIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVR 918
Query: 782 SMKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHP 841
SMKRARDIR+QLEGLL+RVEIELT+N NDL+AIKKTI+SG+FPH+AKLQK+GSY+T+KHP
Sbjct: 919 SMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSAKLQKNGSYRTVKHP 978
Query: 842 QTVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLC 881
QTVHIHPSSGL Q P+W++YH+LVCTS+EYMRQVTELKPEWLVEIAPH+Y LKDVEDL
Sbjct: 979 QTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLS 1038
BLAST of Sed0002514 vs. NCBI nr
Match:
KAG6587574.1 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1328.2 bits (3436), Expect = 0.0e+00
Identity = 693/905 (76.57%), Postives = 780/905 (86.19%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTSNLD---EEEEERLRDRKEREQLEKNLRQRDAVGTK--- 61
E + LE E+ + VKR +S+ D E EEER RD++EREQLE+N+R+RDA GTK
Sbjct: 223 EEESALERENRQ---VKRRTSSSEDDGSESEEERQRDQREREQLERNIRERDAAGTKKLT 282
Query: 62 --NLFKKERSKGVVGKNEIGH-----LRKISRQEYLMRREQKKIQEIREEIENDRFQPKR 121
L +KE + + + + LRK+SRQEYL +RE+KK++EIR++IE++++
Sbjct: 283 EQKLSRKEEEEAIRRSKALENDGTDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFDG 342
Query: 122 DRDEVIK----RYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQRY 181
+ ++ RYKK++YELV + D + YRMPEAYD GV NQDKRF+VAMQRY
Sbjct: 343 VKLTEVEYRELRYKKEIYELVKKRTDEADEINEYRMPEAYDQEGGV-NQDKRFAVAMQRY 402
Query: 182 TDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVME 241
DS DK WE+HQ+ KA+MKFGSKNKK+A D+Y+FVFEDQIEFIK SVME
Sbjct: 403 RDSGAADKMNPFAEQEAWEDHQIGKASMKFGSKNKKQA--DDYQFVFEDQIEFIKASVME 462
Query: 242 SDEFLKAESVE-MSKSNARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGSG 301
DEF+ +E + KS A+SALEKLQEERKTLPIYPYRDQLLQA+NDYQ+LVIVGETGSG
Sbjct: 463 GDEFVDEHQIESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 522
Query: 302 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 361
KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 523 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 582
Query: 362 DKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKL 421
DKT+LKYMTDGMLLREFL EPDLASYSVI+VDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 583 DKTILKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 642
Query: 422 LISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPA 481
LISSATLDAEKFSDYFD APIFKIPGRRYPVEI FTKAPE DYLDAAIVT LQIH++KP
Sbjct: 643 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 702
Query: 482 GDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGAR 541
GDILVFLTGQEEIE AE I+KHR RGLGTKIAELIICP+YANLP+ELQAKIFEPTP GAR
Sbjct: 703 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 762
Query: 542 KVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGR 601
KV+LATNIAETSLTIDGIKYVIDPGF K+KSYNP+T MESLQV PISKASANQRAGR GR
Sbjct: 763 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGR 822
Query: 602 TGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEA 661
TGPGMCFRLYT+++Y +E+EDN PEIQRTNLANVVLTLKSLGI+DL FDFMDQPP EA
Sbjct: 823 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 882
Query: 662 LLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLS 721
LL+ALELL++L ALNK GELTK+GRRMAEFPLDPMLSKM+VASEK KCS+E ISIAAMLS
Sbjct: 883 LLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLS 942
Query: 722 VDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVRS 781
+ SIFYRPK+KQVHADNA+MNFH GNVGDHIAL VYNSWRETNYSTQWCYENYIQVRS
Sbjct: 943 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 1002
Query: 782 MKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHPQ 841
MKRARDIR+QLEGLL+RVEIELT+N NDL+AIKKTI+SGFFPH+AKLQK+GSY+T+KHPQ
Sbjct: 1003 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 1062
Query: 842 TVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQ 881
TVHIHPSSGL Q P+W +YH+LVCTS+EYMRQVTELKPEWLVEIAPH+Y LKDVEDL Q
Sbjct: 1063 TVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSQ 1121
BLAST of Sed0002514 vs. ExPASy Swiss-Prot
Match:
Q8VY00 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana OX=3702 GN=ESP3 PE=1 SV=1)
HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 622/895 (69.50%), Postives = 748/895 (83.58%), Query Frame = 0
Query: 10 EDVEEVLVKRTRTSNLDEEEEERLRDRKEREQLEKNLRQRDAVGTK-----NLFKKERSK 69
ED V K + + E EEER+RD+KERE+LE++L+ RD T+ L KKE+ +
Sbjct: 146 EDSRHVRRKVSEEDDGSESEEERVRDQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEE 205
Query: 70 GV-----VGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF---QPKRDRDEVIK- 129
V + K+++ LRK+SRQEYL +REQKK+ E+R+EIE++++ K E+ +
Sbjct: 206 AVRRANALEKDDLYSLRKVSRQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTETELREF 265
Query: 130 RYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQRYTDSSRNDK--- 189
RYKK++Y+LV D D + YR+P+AYD GV +Q+KRFSVA+QRY D +K
Sbjct: 266 RYKKELYDLVKKRTQDEDNVEEYRIPDAYDQEGGV-DQEKRFSVAVQRYRDLDSTEKMNP 325
Query: 190 -----TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVMESDEFLKAESVE 249
WE+HQ+ KAT+KFG+KNK+ + D+Y+FVFEDQI FIKESVM + + A +
Sbjct: 326 FAEQEAWEDHQIGKATLKFGAKNKQ--ASDDYQFVFEDQINFIKESVMAGENYEDAMDAK 385
Query: 250 MSKSN--ARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGSGKTTQIPQYLH 309
+ ++ALE+LQE R++LPIY YRDQLL+A+ ++Q+LVIVG+TGSGKTTQIPQYLH
Sbjct: 386 QKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLH 445
Query: 310 EAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 369
EAGYTKRGKVGCTQPRRVAAMS+A+RV+QE+GVKLGHEVGYSIRFEDCTSDKTVLKYMTD
Sbjct: 446 EAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 505
Query: 370 GMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAE 429
GMLLRE L EPDLASYSV+IVDEAHERTLSTD+LFGLVKDIARFRPDLKLLISSAT+DAE
Sbjct: 506 GMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAE 565
Query: 430 KFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPAGDILVFLTGQ 489
KFSDYFD APIF PGRRYPVEI +T APE DY+DAAIVT+L IH+ +P GDILVF TGQ
Sbjct: 566 KFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQ 625
Query: 490 EEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGARKVILATNIAE 549
EEIE AE ILKHR RGLGTKI ELIICP+YANLPSELQAKIFEPTP+GARKV+LATNIAE
Sbjct: 626 EEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAE 685
Query: 550 TSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGRTGPGMCFRLY 609
TSLTIDGIKYV+DPGF KMKSYNP+T MESL + PISKASA QRAGR GRT PG C+RLY
Sbjct: 686 TSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLY 745
Query: 610 TSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEALLEALELLFS 669
T+F Y+++LE+N PE+QRTNLA+VVL LKSLGI+DL FDFMD PP EAL+++LELLF+
Sbjct: 746 TAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFA 805
Query: 670 LNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLSVDGSIFYRPK 729
L ALNK GELTK GRRMAEFPLDPMLSKMIV S+K+KCS+E ISIAAMLS+ GSIFYRPK
Sbjct: 806 LGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPK 865
Query: 730 NKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVRSMKRARDIREQ 789
+KQVHADNA+MNFH GNVGDHIAL VY+SW+ETN+STQWCYENYIQVRSMKRARDIR+Q
Sbjct: 866 DKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQ 925
Query: 790 LEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHPQTVHIHPSSGL 849
LEGLL+RVEI++++N N+L++++K+I++GFFPH AKLQK+GSY+T+KHPQTVHIHP+SGL
Sbjct: 926 LEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGL 985
Query: 850 VQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQRKMPR 881
Q P+W++YH+LV TS+EYMRQVTELKPEWL+E+APHYY LKDVED +KMP+
Sbjct: 986 SQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKMPK 1037
BLAST of Sed0002514 vs. ExPASy Swiss-Prot
Match:
F4IJV4 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsis thaliana OX=3702 GN=MEE29 PE=2 SV=1)
HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 605/912 (66.34%), Postives = 736/912 (80.70%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTS----------NLDEEEEERLRDRKEREQLEKNLRQRDA 61
+ +LE +D E V+V+ + + + E EEERLRD++ERE+LE++LR+RD
Sbjct: 129 KKSEQLEDDDDEVVIVREDKRNVRRKVSEDEDDGTESEEERLRDQREREELEQHLRERDT 188
Query: 62 VGTKNLFKKERSK----------GVVGKNEIGHLRKISRQEYLMRREQKKIQEIREEIEN 121
T+ L + + SK V K +I LRK S QEY+ +R+QKK+ E++++IE+
Sbjct: 189 ARTRKLTEPKMSKKEQEEFVRRDSAVDKGDIESLRKFSWQEYMKKRKQKKVLELKDDIED 248
Query: 122 DRF----QPKRDRDEVIKRYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRF 181
+ + + +R+ RYK+++YEL+ + + D YRMP+AY D +G +Q+KRF
Sbjct: 249 EPYLFGDEKLTEREIREFRYKREIYELIKKSTQEEDNVGEYRMPDAY-DQQGSVDQEKRF 308
Query: 182 SVAMQRYTDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEF 241
+V++QRY D +K WE+HQ+E A +KFG+KNK+ D YEFVFEDQI+F
Sbjct: 309 AVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKNKE--VSDNYEFVFEDQIDF 368
Query: 242 IKESVMESDEFLKAESVEMSKSNA-RSALEKLQEERKTLPIYPYRDQLLQAINDYQILVI 301
IK SV+ D + + S+ +A +SA LQE+RK LPIY YRDQLL A+ D+Q+L+I
Sbjct: 369 IKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLII 428
Query: 302 VGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSI 361
VGETGSGKTTQIPQYLHEAGYTK GKVGCTQPRRVAAMS+A+RV+QE+G KLGHEVGYSI
Sbjct: 429 VGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSI 488
Query: 362 RFEDCTSDKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIAR 421
RFEDCTS+KT+LKYMTDGMLLRE L EPDL SYSVIIVDEAHERTL TD+LFGLVKDIAR
Sbjct: 489 RFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIAR 548
Query: 422 FRPDLKLLISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQ 481
RPDLKLLISSAT+DAEKFSD+FD+APIF+ PGRRYPV+I FT APE DY+DAAI TVL
Sbjct: 549 ARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLT 608
Query: 482 IHISKPAGDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFE 541
IH+ +P GD+LVFL GQEEIE E LKH+ RGLGTKI ELIICP+YANLPSELQAKIFE
Sbjct: 609 IHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFE 668
Query: 542 PTPKGARKVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQ 601
PTP+GARKV+LATNIAETSLTIDGIKYV+DPGF KMKSYNP+T MESL V PISKASA Q
Sbjct: 669 PTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQ 728
Query: 602 RAGRCGRTGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFM 661
R GR GRT PG C+RLYT+F Y ++LEDN PEIQRTNLA+VVL+LKSLGI++L FDFM
Sbjct: 729 RTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFM 788
Query: 662 DQPPCEALLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAI 721
D PP EAL+++LELLF+L ALN+ GELTK GRRMAEFPLDPMLSKMIV S+K+KCS+E I
Sbjct: 789 DPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEII 848
Query: 722 SIAAMLSVDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYE 781
SIAAMLS+ SIFYRPK+KQVHADNA NFH GNVGDHIA +YNSW+ETNYSTQWCYE
Sbjct: 849 SIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYE 908
Query: 782 NYIQVRSMKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSY 841
NYIQVRSMKRARDIR+QLEGLL+RVEI++++N+N+L++I+K+I++GFFPH AKLQK+GSY
Sbjct: 909 NYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSY 968
Query: 842 KTLKHPQTVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLK 881
+T+KHPQTVHIHP+SGL Q P+W++YH+LV TS+EYMRQVTELKPEWL+EIAPHYY LK
Sbjct: 969 RTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLK 1028
BLAST of Sed0002514 vs. ExPASy Swiss-Prot
Match:
F4JMJ3 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 OS=Arabidopsis thaliana OX=3702 GN=At4g16680 PE=2 SV=2)
HSP 1 Score: 989.9 bits (2558), Expect = 1.8e-287
Identity = 527/877 (60.09%), Postives = 655/877 (74.69%), Query Frame = 0
Query: 13 EEVLVKRTRTSNLDEEEEERLRDRKEREQLEKNLRQRDAVGTKNLFKKERSKGVVGKNEI 72
+++ KR R S ++EEEEE ++ + EK V+ +EI
Sbjct: 43 KKISTKRRRIS-VEEEEEEEDENKTKLSSWEK---------------------VLSSDEI 102
Query: 73 GHLRKISRQEYLMRREQKKIQEIREEIENDRFQPKRDRDEVIKRYKKDVYELVTTNEADY 132
LR++SR++YL RE KK++E+R+E ++D D+V
Sbjct: 103 LRLREVSRRKYLTDRENKKVEELRDE--------RKDDDDV------------------- 162
Query: 133 DIHDRYRMPEAYDDHEGVPNQDKRFSVAMQRYTDSSRN------DKTWEEHQLEKATMKF 192
+ YR P+AY D EG +Q KRF VA +RY + R+ + WE+HQ +KA ++F
Sbjct: 163 ---EGYRFPDAY-DQEGCIDQKKRFDVAKERYCERRRSGRVVTEQEAWEDHQAQKARVRF 222
Query: 193 GSKNKKRASGDEYEFVFEDQIEFIKESVMESDEFLKAESVEMSKSNARSALEKLQEERKT 252
G+K+KK+ D YEFVF+D F++ES +AE+ + +++A EK +E R+
Sbjct: 223 GAKDKKQVV-DGYEFVFDDLTGFVEES-------SEAETGKHRGCYSKTAAEKAREGREF 282
Query: 253 LPIYPYRDQLLQAINDYQILVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAM 312
LPI+ YR++LL+ I + Q+LVIVGETGSGKTTQIPQYL EAGYTKRGK+GCTQPRRVAAM
Sbjct: 283 LPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAM 342
Query: 313 SIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLVEPDLASYSVIIV 372
S+ASRV+QE+GVKLGHEVGYSIRFEDCTS+KTV+KYMTDGMLLRE L+EP L SYSVII+
Sbjct: 343 SVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIII 402
Query: 373 DEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDRAPIFKIPGRRYPV 432
DEAHERTLSTD+LF LVKD+A+ RPDL+L+ISSATL+A+KFS+YFD A I+ IPGRRYPV
Sbjct: 403 DEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPV 462
Query: 433 EIRFTKAPEPDYLDAAIVTVLQIHISKPAGDILVFLTGQEEIENAEGILKHRARGLGTKI 492
E F K PEPDYL+ I TV+QIH ++ GDILVFLTGQEEIE E LK R LGTK
Sbjct: 463 EKLFRKCPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKG 522
Query: 493 AELIICPVYANLPSELQAKIFEPTPKGARKVILATNIAETSLTIDGIKYVIDPGFQKMKS 552
+E+IICP+Y+NLP+ LQAK+FEP PKG RKV+LATNIAETSLTIDG+KYVIDPG+ K+ S
Sbjct: 523 SEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINS 582
Query: 553 YNPKTRMESLQVVPISKASANQRAGRCGRTGPGMCFRLYTSFTYSDELEDNMTPEIQRTN 612
YNP+T MESL V PISKASA QRAGR GRTGPG CFRLY +LE PEIQR N
Sbjct: 583 YNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYN----IKDLEPTTIPEIQRAN 642
Query: 613 LANVVLTLKSLGINDLGKFDFMDQPPCEALLEALELLFSLNALNKFGELTKLGRRMAEFP 672
LA+VVLTLKSLGI D+ FDFMD PP ALL+ALELL++L AL++ GE+TK+G RM EFP
Sbjct: 643 LASVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYALGALDEIGEITKVGERMVEFP 702
Query: 673 LDPMLSKMIVASEKFKCSNEAISIAAMLSVDGSIFYRPKNKQVHADNAQMNFHRG--NVG 732
+DPMLSKMIV SEK+KCS E I+IAAMLSV S+FYRPKN+QV AD A+M+F+ NVG
Sbjct: 703 VDPMLSKMIVGSEKYKCSKEIITIAAMLSVGNSVFYRPKNQQVFADKARMDFYEDTENVG 762
Query: 733 DHIALYNVYNSWRETNYSTQWCYENYIQVRSMKRARDIREQLEGLLKRVEIELTTNSNDL 792
DHIAL VYNSW+E NYSTQWC E +IQ +SMKRARDIR+QL GLL ++ +ELT+N NDL
Sbjct: 763 DHIALLRVYNSWKEENYSTQWCCEKFIQSKSMKRARDIRDQLLGLLNKIGVELTSNPNDL 822
Query: 793 EAIKKTILSGFFPHAAKLQKDGSYKTLKHPQTVHIHPSSGLVQGFP-KWIIYHKLVCTSR 852
+AIKK IL+GFFPH+AKLQK+GSY+ +K PQTV++HP+SGL P KW++YH+LV T++
Sbjct: 823 DAIKKAILAGFFPHSAKLQKNGSYRRVKEPQTVYVHPNSGLFGASPSKWLVYHELVLTTK 854
Query: 853 EYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQRKMPR 881
EYMR TE+KPEWL+EIAPHYY LKD+ED +K R
Sbjct: 883 EYMRHTTEMKPEWLIEIAPHYYKLKDIEDTRPKKTQR 854
BLAST of Sed0002514 vs. ExPASy Swiss-Prot
Match:
Q54MH3 (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostelium discoideum OX=44689 GN=dhx16 PE=3 SV=1)
HSP 1 Score: 936.4 bits (2419), Expect = 2.3e-271
Identity = 497/883 (56.29%), Postives = 652/883 (73.84%), Query Frame = 0
Query: 23 SNLDEEEEERLRDRKEREQLEKNLRQRDAVGTKN--LFKKERSKGVVGKNEIGHLRKI-- 82
+N + EE+E R+++E ++L +++RD TK + E + + KN + ++
Sbjct: 221 NNNNGEEDEYEREQREVKELSDRIKKRDEKSTKKKIVDDSETKESIERKNRLEQNEQLET 280
Query: 83 ----SRQEYLMRREQKKIQEIREEIEN--DRFQPKRDRDEVIKRY--KKDVYELVT--TN 142
SR++YL+ EQK++ ++ EIE + F+ ++ ++ IK + KK +YEL + N
Sbjct: 281 ERTKSRRKYLVGEEQKRLILLKREIEEEYELFKDQKLTEQEIKDFEKKKKLYELASQRIN 340
Query: 143 EADYDIHDRYRMPEAYDDHEGVPN----QDKRFSVAMQRYTDSSRN--DKTWEEHQLEKA 202
E+ D Y++P D + + D + + SS N K WE+++++ A
Sbjct: 341 ESQQS-DDYYQLPSEIKDKDSLLKSSYINDNKNKKGNDSSSSSSYNPEQKEWEQNRMKSA 400
Query: 203 TMKFGSKNKKRASG--DEYEFVFEDQIEFIKESVMESDEFLKAESVEMSK---SNARSAL 262
+ + G +EYE+VFEDQIEFIKE V++ + K + V + K + A
Sbjct: 401 ISENRGLSTANIGGGNEEYEYVFEDQIEFIKEEVLKQGQ--KGDGVMILKPGDDGSAQAK 460
Query: 263 EKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGSGKTTQIPQYLHEAGYTKRGKVGC 322
+QE RK+LP+YPYR+QL+ A+ +YQ+L+IVGETGSGKTTQIPQYLHEAG++K GK+GC
Sbjct: 461 MTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGC 520
Query: 323 TQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLVEPD 382
TQPRRVAAMS+A+RV++E+G KLG+EVGYSIRFEDCTS KTVL+YMTDGML+REFL PD
Sbjct: 521 TQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPD 580
Query: 383 LASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDRAPIF 442
LASYSV+I+DEAHERTL TD+LFGL+KDI RFRPDLKLLISSAT+DAE+FSDYFD AP F
Sbjct: 581 LASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTF 640
Query: 443 KIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPAGDILVFLTGQEEIENAEGILKH 502
IPGR+Y V +T+APE DYLDAA+VTVLQIHI++P GDILVFLTGQEE++ A +L+
Sbjct: 641 NIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQT 700
Query: 503 RARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGARKVILATNIAETSLTIDGIKYVI 562
R RGLGTKI ELII +Y+ LP++LQAKIFEPTP ARKV+LATNIAETSLTIDGI YVI
Sbjct: 701 RTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVI 760
Query: 563 DPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGRTGPGMCFRLYTSFTYSDELEDN 622
DPGF K K +NP+T MESL + P+S+ASANQR GR GR PG CFRL+T++ + +ELE+N
Sbjct: 761 DPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEEN 820
Query: 623 MTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEALLEALELLFSLNALNKFGELTK 682
PEIQRTNL NVVL LKS+GINDL FDFMD PP + L+ ALE L++L ALN G+LTK
Sbjct: 821 TIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTK 880
Query: 683 LGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLSVDGSIFYRPKNKQVHADNAQMN 742
LGR+MAEFP+DP LSKMI+ASEK+KCS E ++I AMLSV +IFYRPK+K AD A+
Sbjct: 881 LGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKL 940
Query: 743 FHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVRSMKRARDIREQLEGLLKRVEIEL 802
F GDH+ L NV+N WRE+ Y+ QWC+EN+IQ RSMKRA+D+R+QLE LL+RVEI L
Sbjct: 941 FFHPQ-GDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPL 1000
Query: 803 TTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHPQTVHIHPSSGLVQGFPKWIIYHK 862
+N +D ++I+K I SGFF ++AKL+K G ++T KH Q+V IHPSS L Q PKW++YH+
Sbjct: 1001 VSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHE 1060
Query: 863 LVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQRKMPR 881
LV T++E+MRQ+ E++ WL EIAPH Y KDV D +K+P+
Sbjct: 1061 LVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVND--NQKLPK 1097
BLAST of Sed0002514 vs. ExPASy Swiss-Prot
Match:
Q767K6 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa OX=9823 GN=DHX16 PE=3 SV=1)
HSP 1 Score: 912.1 bits (2356), Expect = 4.7e-264
Identity = 488/922 (52.93%), Postives = 659/922 (71.48%), Query Frame = 0
Query: 1 MESKRKLEIEDVEEVLV----KRTRTSN------------LDEEEEERLRDRKEREQLEK 60
+ KR+ E E+ EE V K+T N + E ERL+D +ER+ +
Sbjct: 128 LRKKRQEEEEEEEEEEVPEKGKKTTGGNKPQTEKPESEDEWERTERERLQDLEERDAFAE 187
Query: 61 NLRQRDAVGTKNLFKKERSKGVV------------GKNEIGHLRKISRQEYLMRREQKKI 120
+RQRD T+N+ ++ K K + LRK SR+EYL +RE++K+
Sbjct: 188 RVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKREREKL 247
Query: 121 QEIREEIENDRF------QPKRDRDEVIKRYKKDVYELVTTNEA-----DYDIHDRYRMP 180
+++ E+ ++ F + +R E+ +YK+ V +L A + +RY MP
Sbjct: 248 EDLEAELADEEFLFGDVELSRHERREL--KYKRRVRDLAREYRAAGEQEKLEATNRYHMP 307
Query: 181 EAYDDHEGVPNQDKRFSVAMQRYTDSSRNDKTWEEHQLEKATMKFGSKNKKRASGDEYEF 240
E + G P + + + + WEE +L A++KFG+++ + +Y+
Sbjct: 308 E---ETRGQPT--RAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARD-AASQEPKYQL 367
Query: 241 VFEDQ--IEFIKESVMESDEFLKAESVEMSKSNARSALEKLQEERKTLPIYPYRDQLLQA 300
V E++ IEF++ + ++ DE E E +Q R++LP++P+R++LL A
Sbjct: 368 VLEEEETIEFVRATQLQGDE----EPAAPPAPTQAQQKESIQAVRRSLPVFPFREELLAA 427
Query: 301 INDYQILVIVGETGSGKTTQIPQYLHEAGYTKRG-KVGCTQPRRVAAMSIASRVSQELGV 360
+ ++QIL+I GETGSGKTTQIPQYL E GYT++G K+ CTQPRRVAAMS+A+RV++E+GV
Sbjct: 428 VANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGV 487
Query: 361 KLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDV 420
KLG+EVGYSIRFEDCTS++TVL+YMTDGMLLREFL EPDLASYSV++VDEAHERTL TD+
Sbjct: 488 KLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDI 547
Query: 421 LFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDY 480
LFGL+KD+ARFRP+LK+L++SATLD +FS +FD AP+F+IPGRR+PV+I +TKAPE DY
Sbjct: 548 LFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADY 607
Query: 481 LDAAIVTVLQIHISKPAGDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANL 540
L+A +V+VLQIH+++P GDILVFLTGQEEIE A +L+ R R LG+KI EL++ P+YANL
Sbjct: 608 LEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANL 667
Query: 541 PSELQAKIFEPTPKGARKVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQV 600
PS++QA+IF+PTP GARKV++ATNIAETSLTI+GI YV+DPGF K KSYNP+T MESL V
Sbjct: 668 PSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTV 727
Query: 601 VPISKASANQRAGRCGRTGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLG 660
P SKASANQRAGR GR G CFRLYT++ Y ELE+ PEIQRT+L NVVL LKSLG
Sbjct: 728 TPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLG 787
Query: 661 INDLGKFDFMDQPPCEALLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVAS 720
I+DL FDF+D PP E LL ALE L++L ALN GELT GR+MAE P+DPMLSKMI+AS
Sbjct: 788 IHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILAS 847
Query: 721 EKFKCSNEAISIAAMLSVDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRE 780
EK+ CS E +++AAMLSV+ SIFYRPK+K VHADNA++NF GDH+ L NVY W E
Sbjct: 848 EKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAE 907
Query: 781 TNYSTQWCYENYIQVRSMKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPH 840
+ YS+QWCYEN++Q RSM+RARD+REQLEGLL+RVE+ L++ D ++K I +G+F H
Sbjct: 908 SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYH 967
Query: 841 AAKLQKDGSYKTLKHPQTVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLV 881
A+L + G Y+T+K QTV IHP+S L + P+W++YH+LV T++E+MRQV E++ WL+
Sbjct: 968 TARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLL 1027
BLAST of Sed0002514 vs. ExPASy TrEMBL
Match:
A0A6J1BZI7 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007026 PE=4 SV=1)
HSP 1 Score: 1338.9 bits (3464), Expect = 0.0e+00
Identity = 696/906 (76.82%), Postives = 782/906 (86.31%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTSNLD----EEEEERLRDRKEREQLEKNLRQRDAVGTK-- 61
E K + + E+ V+R TS+ D E EEERLRD++EREQLE+N+R+RDA GT+
Sbjct: 148 EDDNKESVLEREDRQVRRRTTSSEDDDGYESEEERLRDQREREQLEQNIRERDAAGTRKL 207
Query: 62 ---NLFKKERSKGV-----VGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF--- 121
L +KE + + + + I LRK+SRQEYL +RE+KK++EIR++IE++++
Sbjct: 208 TEPKLSRKEEDEAIRRSKALENDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFE 267
Query: 122 -QPKRDRDEVIKRYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQR 181
+ + RYKK++YELV + D D YRMPEAYD GV NQDKRF+VAMQR
Sbjct: 268 GVKLTEAEYRELRYKKEIYELVKKRTDEADDIDEYRMPEAYDQEGGV-NQDKRFAVAMQR 327
Query: 182 YTDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVM 241
Y DS DK WEEHQ+ KATMKFGSKNKK++S D+Y+FVFEDQIEFIK SVM
Sbjct: 328 YRDSGTADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVM 387
Query: 242 ESDEFL-KAESVEMSKSNARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGS 301
E DEF+ + E+ + KS A+SALEKLQEERKTLPIYPYRDQLLQA+NDYQ+LVIVGETGS
Sbjct: 388 EGDEFVDERETESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGS 447
Query: 302 GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCT 361
GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCT
Sbjct: 448 GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCT 507
Query: 362 SDKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLK 421
SDKTVLKYMTDGMLLREFL EPDLASYSVI+VDEAHERTLSTDVLFGLVKDIARFRPDLK
Sbjct: 508 SDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLK 567
Query: 422 LLISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKP 481
LLISSATLDAEKFSDYFD APIFKIPGRRYPVEI FTKAPE DYLDAAIVT LQIH++KP
Sbjct: 568 LLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTKP 627
Query: 482 AGDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGA 541
GDILVFLTGQEEIE AE I+KHR RGLGTKIAELIICP+YANLP+ELQAKIFEPTP GA
Sbjct: 628 PGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGA 687
Query: 542 RKVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCG 601
RKV+LATNIAETSLTIDGIKYVIDPGF K+KSYNP+T MESLQV PISKASANQRAGR G
Sbjct: 688 RKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSG 747
Query: 602 RTGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCE 661
RTGPGMCFRLYT+++Y +E+EDN PEIQRTNLANVVLTLKSLGI+DL FDFMDQPP E
Sbjct: 748 RTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSE 807
Query: 662 ALLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAML 721
ALL+ALELL++L ALNK GELTKLGRRMAEFPLDPMLSKM+VASEKFKCS+E ISIAAML
Sbjct: 808 ALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEVISIAAML 867
Query: 722 SVDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVR 781
S+ SIFYRPK+KQVHADNA+MNFH GNVGDHIAL VYNSWRETNYSTQWCYENYIQVR
Sbjct: 868 SIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVR 927
Query: 782 SMKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHP 841
SMKRARDIR+QLEGLL+RVEIELT+N NDL+AIKKTI+SG+FPH+ KLQK+GSY+T+KHP
Sbjct: 928 SMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHP 987
Query: 842 QTVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLC 881
QTVHIHPSSGL Q P+W++YH+LVCTS+EYMRQVTELKPEWLVEIAPH+Y LKDVEDL
Sbjct: 988 QTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLS 1047
BLAST of Sed0002514 vs. ExPASy TrEMBL
Match:
A0A1S3BVU3 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo OX=3656 GN=LOC103494032 PE=4 SV=1)
HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 697/905 (77.02%), Postives = 778/905 (85.97%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTSNLD---EEEEERLRDRKEREQLEKNLRQRDAVGTKNLF 61
E K + E VKR +S+ D E EEERLRD++EREQLE+N+R+RDA GTK L
Sbjct: 138 EDDEKESALERENRQVKRRASSSEDDSSESEEERLRDQREREQLERNIRERDAAGTKKLT 197
Query: 62 KKE----------RSKGVVGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF---- 121
+++ R + N I LRK+SRQEYL +RE+KK++EIR++IE++++
Sbjct: 198 EQKLSRKEEEEAIRRSEALENNGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEG 257
Query: 122 QPKRDRDEVIKRYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQRY 181
D + RYKK++YELV + D + YRMPEAYD GV NQDKRF+VAMQRY
Sbjct: 258 VKLTDAEYRELRYKKEIYELVKKRTDEADDVNEYRMPEAYDQEGGV-NQDKRFAVAMQRY 317
Query: 182 TDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVME 241
DS DK WEEHQ+ KATMKFGSKNKK++S D+Y+FVFEDQIEFIK SVME
Sbjct: 318 RDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVME 377
Query: 242 SDEFLKAESVE-MSKSNARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGSG 301
DEF+ E + KS A+SALEKLQEERKTLPIYPYRDQLLQA+NDYQ+LVIVGETGSG
Sbjct: 378 GDEFVDERQTESLEKSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 437
Query: 302 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 361
KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 438 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 497
Query: 362 DKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKL 421
DKTVLKYMTDGMLLREFL EPDLASYSVI+VDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 498 DKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 557
Query: 422 LISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPA 481
LISSATLDAEKFSDYFD APIFKIPGRRYPVEI FTKAPE DYLDAAIVT LQIH++KP
Sbjct: 558 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 617
Query: 482 GDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGAR 541
GDILVFLTGQEEIE AE I+KHR RGLGTKIAELIICP+YANLP+ELQAKIFEPTP GAR
Sbjct: 618 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGAR 677
Query: 542 KVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGR 601
KV+LATNIAETSLTIDGIKYVIDPGF K+KSYNP+T ME+LQV PISKASANQRAGR GR
Sbjct: 678 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 737
Query: 602 TGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEA 661
TGPGMCFRLYT+++Y +E+EDN PEIQRTNLANVVLTLKSLGI+DL FDFMDQPP EA
Sbjct: 738 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 797
Query: 662 LLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLS 721
LL+ALELL++L ALNK GELTKLGRRMAEFPLDPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 798 LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 857
Query: 722 VDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVRS 781
+ SIFYRPK+KQVHADNA+MNFH GNVGDHIAL VYNSWRETN+STQWCYENYIQVRS
Sbjct: 858 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNFSTQWCYENYIQVRS 917
Query: 782 MKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHPQ 841
MKRARDIR+QLEGLL+RVEIELT+N NDL+AIKKTI+SGFFPH+AKLQK+GSY+T+KHPQ
Sbjct: 918 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTVKHPQ 977
Query: 842 TVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQ 881
TVHIHPSSGL Q P+W++YH+LVCTS+EYMRQVTELKPEWLVEIAPH+Y LKDVEDL
Sbjct: 978 TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1037
BLAST of Sed0002514 vs. ExPASy TrEMBL
Match:
A0A0A0LUM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012660 PE=4 SV=1)
HSP 1 Score: 1334.7 bits (3453), Expect = 0.0e+00
Identity = 690/906 (76.16%), Postives = 781/906 (86.20%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTSNLDEE----EEERLRDRKEREQLEKNLRQRDAVGTKNL 61
+ +++ +E + +R R S+ ++E EEERLRD++EREQLE+N+R+RDA GTK L
Sbjct: 139 DDEKESALERENRQVKRRQRASSSEDESSESEEERLRDQREREQLERNIRERDAAGTKKL 198
Query: 62 FKKE----------RSKGVVGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF--- 121
+++ R + + I LRK+SRQEYL +RE+KK++EIR++IE++++
Sbjct: 199 TEQKLSRKEEEEAIRRSEALENDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFE 258
Query: 122 -QPKRDRDEVIKRYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQR 181
D + +YKK++YELV + D + YRMPEAYD GV NQDKRF+VAMQR
Sbjct: 259 GVKLTDAEYRELKYKKEIYELVKKRTDEADDINEYRMPEAYDQEGGV-NQDKRFAVAMQR 318
Query: 182 YTDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVM 241
Y DS DK WEEHQ+ KATMKFGSKNKK++S D+Y+FVFEDQIEFIK SVM
Sbjct: 319 YRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVM 378
Query: 242 ESDEFLKAESVE-MSKSNARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGS 301
E DEF+ E + KS A+SALEKLQEERKTLPIYPYRDQLLQA+NDYQ+LVIVGETGS
Sbjct: 379 EGDEFVDERQTESLEKSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGS 438
Query: 302 GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCT 361
GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCT
Sbjct: 439 GKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCT 498
Query: 362 SDKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLK 421
SDKTVLKYMTDGMLLREFL EPDLASYSV++VDEAHERTLSTDVLFGLVKDIARFRPDLK
Sbjct: 499 SDKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDVLFGLVKDIARFRPDLK 558
Query: 422 LLISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKP 481
LLISSATLDAEKFSDYFD APIFKIPGRRYPVEI FTKAPE DYLDAAIVT LQIH++KP
Sbjct: 559 LLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKP 618
Query: 482 AGDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGA 541
GDILVFLTGQEEIE AE I+KHR RGLGTKIAELIICP+YANLP+ELQAKIFEPTP GA
Sbjct: 619 PGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPDGA 678
Query: 542 RKVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCG 601
RKV+LATNIAETSLTIDGIKYVIDPGF K+KSYNP+T ME+LQV PISKASANQRAGR G
Sbjct: 679 RKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSG 738
Query: 602 RTGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCE 661
RTGPGMCFRLYT+++Y +E+EDN PEIQRTNLANVVLTLKSLGI+DL FDFMDQPP E
Sbjct: 739 RTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSE 798
Query: 662 ALLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAML 721
ALL+ALELL++L ALNK GELTKLGRRMAEFPLDPMLSKM+VASEKFKCS+E ISIAAML
Sbjct: 799 ALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAML 858
Query: 722 SVDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVR 781
S+ SIFYRPK+KQVHADNA+MNFH GNVGDHIAL VYNSWRETNYSTQWCYENYIQVR
Sbjct: 859 SIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVR 918
Query: 782 SMKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHP 841
SMKRARDIR+QLEGLL+RVEIELT+N NDL+AIKKTI+SG+FPH+AKLQK+GSY+T+KHP
Sbjct: 919 SMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSAKLQKNGSYRTVKHP 978
Query: 842 QTVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLC 881
QTVHIHPSSGL Q P+W++YH+LVCTS+EYMRQVTELKPEWLVEIAPH+Y LKDVEDL
Sbjct: 979 QTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLS 1038
BLAST of Sed0002514 vs. ExPASy TrEMBL
Match:
A0A6J1F0A9 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440982 PE=4 SV=1)
HSP 1 Score: 1328.2 bits (3436), Expect = 0.0e+00
Identity = 693/905 (76.57%), Postives = 780/905 (86.19%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTSNLD---EEEEERLRDRKEREQLEKNLRQRDAVGTK--- 61
E + LE E+ + VKR +S+ D E EEER RD++EREQLE+N+R+RDA GTK
Sbjct: 141 EEESALERENRQ---VKRRTSSSEDDGSESEEERQRDQREREQLERNIRERDAAGTKKLT 200
Query: 62 --NLFKKERSKGVVGKNEIGH-----LRKISRQEYLMRREQKKIQEIREEIENDRFQPKR 121
L +KE + + + + LRK+SRQEYL +RE+KK++EIR++IE++++
Sbjct: 201 EQKLSRKEEEEAIRRSKALENDGTDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFDG 260
Query: 122 DRDEVIK----RYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQRY 181
+ ++ RYKK++YELV + D + YRMPEAYD GV NQDKRF+VAMQRY
Sbjct: 261 VKLTEVEYRELRYKKEIYELVKKRTDEADEINEYRMPEAYDQEGGV-NQDKRFAVAMQRY 320
Query: 182 TDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVME 241
DS DK WE+HQ+ KA+MKFGSKNKK+A D+Y+FVFEDQIEFIK SVME
Sbjct: 321 RDSGAADKMNPFAEQEAWEDHQIGKASMKFGSKNKKQA--DDYQFVFEDQIEFIKASVME 380
Query: 242 SDEFLKAESVE-MSKSNARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGSG 301
DEF+ +E + KS A+SALEKLQEERKTLPIYPYRDQLLQA+NDYQ+LVIVGETGSG
Sbjct: 381 GDEFVDEHQIESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 440
Query: 302 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 361
KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 441 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 500
Query: 362 DKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKL 421
DKT+LKYMTDGMLLREFL EPDLASYSVI+VDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 501 DKTILKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 560
Query: 422 LISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPA 481
LISSATLDAEKFSDYFD APIFKIPGRRYPVEI FTKAPE DYLDAAIVT LQIH++KP
Sbjct: 561 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 620
Query: 482 GDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGAR 541
GDILVFLTGQEEIE AE I+KHR RGLGTKIAELIICP+YANLP+ELQAKIFEPTP GAR
Sbjct: 621 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 680
Query: 542 KVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGR 601
KV+LATNIAETSLTIDGIKYVIDPGF K+KSYNP+T MESLQV PISKASANQRAGR GR
Sbjct: 681 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGR 740
Query: 602 TGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEA 661
TGPGMCFRLYT+++Y +E+EDN PEIQRTNLANVVLTLKSLGI+DL FDFMDQPP EA
Sbjct: 741 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 800
Query: 662 LLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLS 721
LL+ALELL++L ALNK GELTK+GRRMAEFPLDPMLSKM+VASEK KCS+E ISIAAMLS
Sbjct: 801 LLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLS 860
Query: 722 VDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVRS 781
+ SIFYRPK+KQVHADNA+MNFH GNVGDHIAL VYNSWRETNYSTQWCYENYIQVRS
Sbjct: 861 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 920
Query: 782 MKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHPQ 841
MKRARDIR+QLEGLL+RVEIELT+N NDL+AIKKTI+SGFFPH+AKLQK+GSY+T+KHPQ
Sbjct: 921 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 980
Query: 842 TVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQ 881
TVHIHPSSGL Q P+W +YH+LVCTS+EYMRQVTELKPEWLVEIAPH+Y LKDVEDL Q
Sbjct: 981 TVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSQ 1039
BLAST of Sed0002514 vs. ExPASy TrEMBL
Match:
A0A5A7US39 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002880 PE=4 SV=1)
HSP 1 Score: 1325.8 bits (3430), Expect = 0.0e+00
Identity = 698/928 (75.22%), Postives = 778/928 (83.84%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTSNLD---EEEEERLRDRKEREQLEKNLRQRDAVGTKNLF 61
E K + E VKR +S+ D E EEERLRD++EREQLE+N+R+RDA GTK L
Sbjct: 138 EDDEKESALERENRQVKRRASSSEDDSSESEEERLRDQREREQLERNIRERDAAGTKKLT 197
Query: 62 KKE----------RSKGVVGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF---- 121
+++ R + N I LRK+SRQEYL +RE+KK++EIR++IE++++
Sbjct: 198 EQKLSRKEEEEAIRRSEALENNGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEG 257
Query: 122 QPKRDRDEVIKRYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQRY 181
D + RYKK++YELV + D + YRMPEAYD GV NQDKRF+VAMQRY
Sbjct: 258 VKLTDAEYRELRYKKEIYELVKKRTDEADDVNEYRMPEAYDQEGGV-NQDKRFAVAMQRY 317
Query: 182 TDSSRNDK--------TWEEHQ-----------------------LEKATMKFGSKNKKR 241
DS DK WEEHQ L KATMKFGSKNKK+
Sbjct: 318 RDSGAADKMNPFAEQEAWEEHQIGKCHFSEDLVMLLHQILKQNYPLGKATMKFGSKNKKQ 377
Query: 242 ASGDEYEFVFEDQIEFIKESVMESDEFLKAESVE-MSKSNARSALEKLQEERKTLPIYPY 301
+S D+Y+FVFEDQIEFIK SVME DEF+ E + KS A+SALEKLQEERKTLPIYPY
Sbjct: 378 SS-DDYQFVFEDQIEFIKASVMEGDEFVDERQTESLEKSKAQSALEKLQEERKTLPIYPY 437
Query: 302 RDQLLQAINDYQILVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRV 361
RDQLLQA+NDYQ+LVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA+RV
Sbjct: 438 RDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARV 497
Query: 362 SQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHER 421
SQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFL EPDLASYSVI+VDEAHER
Sbjct: 498 SQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHER 557
Query: 422 TLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTK 481
TLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFD APIFKIPGRRYPVEI FTK
Sbjct: 558 TLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTK 617
Query: 482 APEPDYLDAAIVTVLQIHISKPAGDILVFLTGQEEIENAEGILKHRARGLGTKIAELIIC 541
APE DYLDAAIVT LQIH++KP GDILVFLTGQEEIE AE I+KHR RGLGTKIAELIIC
Sbjct: 618 APEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIIC 677
Query: 542 PVYANLPSELQAKIFEPTPKGARKVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTR 601
P+YANLP+ELQAKIFEPTP GARKV+LATNIAETSLTIDGIKYVIDPGF K+KSYNP+T
Sbjct: 678 PIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTG 737
Query: 602 MESLQVVPISKASANQRAGRCGRTGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVL 661
ME+LQV PISKASANQRAGR GRTGPGMCFRLYT+++Y +E+EDN PEIQRTNLANVVL
Sbjct: 738 MEALQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVL 797
Query: 662 TLKSLGINDLGKFDFMDQPPCEALLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLS 721
TLKSLGI+DL FDFMDQPP EALL+ALELL++L ALNK GELTKLGRRMAEFPLDPMLS
Sbjct: 798 TLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLS 857
Query: 722 KMIVASEKFKCSNEAISIAAMLSVDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNV 781
KM+VASEKFKCS+E ISIAAMLS+ SIFYRPK+KQVHADNA+MNFH GNVGDHIAL V
Sbjct: 858 KMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKV 917
Query: 782 YNSWRETNYSTQWCYENYIQVRSMKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTIL 841
YNSWRETN+STQWCYENYIQVRSMKRARDIR+QLEGLL+RVEIELT+N NDL+AIKKTI+
Sbjct: 918 YNSWRETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTII 977
Query: 842 SGFFPHAAKLQKDGSYKTLKHPQTVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTEL 881
SGFFPH+AKLQK+GSY+T+KHPQTVHIHPSSGL Q P+W++YH+LVCTS+EYMRQVTEL
Sbjct: 978 SGFFPHSAKLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTEL 1037
BLAST of Sed0002514 vs. TAIR 10
Match:
AT1G32490.1 (RNA helicase family protein )
HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 622/895 (69.50%), Postives = 748/895 (83.58%), Query Frame = 0
Query: 10 EDVEEVLVKRTRTSNLDEEEEERLRDRKEREQLEKNLRQRDAVGTK-----NLFKKERSK 69
ED V K + + E EEER+RD+KERE+LE++L+ RD T+ L KKE+ +
Sbjct: 146 EDSRHVRRKVSEEDDGSESEEERVRDQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEE 205
Query: 70 GV-----VGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF---QPKRDRDEVIK- 129
V + K+++ LRK+SRQEYL +REQKK+ E+R+EIE++++ K E+ +
Sbjct: 206 AVRRANALEKDDLYSLRKVSRQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTETELREF 265
Query: 130 RYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQRYTDSSRNDK--- 189
RYKK++Y+LV D D + YR+P+AYD GV +Q+KRFSVA+QRY D +K
Sbjct: 266 RYKKELYDLVKKRTQDEDNVEEYRIPDAYDQEGGV-DQEKRFSVAVQRYRDLDSTEKMNP 325
Query: 190 -----TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVMESDEFLKAESVE 249
WE+HQ+ KAT+KFG+KNK+ + D+Y+FVFEDQI FIKESVM + + A +
Sbjct: 326 FAEQEAWEDHQIGKATLKFGAKNKQ--ASDDYQFVFEDQINFIKESVMAGENYEDAMDAK 385
Query: 250 MSKSN--ARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGSGKTTQIPQYLH 309
+ ++ALE+LQE R++LPIY YRDQLL+A+ ++Q+LVIVG+TGSGKTTQIPQYLH
Sbjct: 386 QKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLH 445
Query: 310 EAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 369
EAGYTKRGKVGCTQPRRVAAMS+A+RV+QE+GVKLGHEVGYSIRFEDCTSDKTVLKYMTD
Sbjct: 446 EAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 505
Query: 370 GMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAE 429
GMLLRE L EPDLASYSV+IVDEAHERTLSTD+LFGLVKDIARFRPDLKLLISSAT+DAE
Sbjct: 506 GMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAE 565
Query: 430 KFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPAGDILVFLTGQ 489
KFSDYFD APIF PGRRYPVEI +T APE DY+DAAIVT+L IH+ +P GDILVF TGQ
Sbjct: 566 KFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQ 625
Query: 490 EEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGARKVILATNIAE 549
EEIE AE ILKHR RGLGTKI ELIICP+YANLPSELQAKIFEPTP+GARKV+LATNIAE
Sbjct: 626 EEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAE 685
Query: 550 TSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGRTGPGMCFRLY 609
TSLTIDGIKYV+DPGF KMKSYNP+T MESL + PISKASA QRAGR GRT PG C+RLY
Sbjct: 686 TSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLY 745
Query: 610 TSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEALLEALELLFS 669
T+F Y+++LE+N PE+QRTNLA+VVL LKSLGI+DL FDFMD PP EAL+++LELLF+
Sbjct: 746 TAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFA 805
Query: 670 LNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLSVDGSIFYRPK 729
L ALNK GELTK GRRMAEFPLDPMLSKMIV S+K+KCS+E ISIAAMLS+ GSIFYRPK
Sbjct: 806 LGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPK 865
Query: 730 NKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVRSMKRARDIREQ 789
+KQVHADNA+MNFH GNVGDHIAL VY+SW+ETN+STQWCYENYIQVRSMKRARDIR+Q
Sbjct: 866 DKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQ 925
Query: 790 LEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHPQTVHIHPSSGL 849
LEGLL+RVEI++++N N+L++++K+I++GFFPH AKLQK+GSY+T+KHPQTVHIHP+SGL
Sbjct: 926 LEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGL 985
Query: 850 VQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQRKMPR 881
Q P+W++YH+LV TS+EYMRQVTELKPEWL+E+APHYY LKDVED +KMP+
Sbjct: 986 SQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKMPK 1037
BLAST of Sed0002514 vs. TAIR 10
Match:
AT1G32490.2 (RNA helicase family protein )
HSP 1 Score: 1207.2 bits (3122), Expect = 0.0e+00
Identity = 616/895 (68.83%), Postives = 740/895 (82.68%), Query Frame = 0
Query: 10 EDVEEVLVKRTRTSNLDEEEEERLRDRKEREQLEKNLRQRDAVGTK-----NLFKKERSK 69
ED V K + + E EEER+RD+KERE+LE++L+ RD T+ L KKE+ +
Sbjct: 146 EDSRHVRRKVSEEDDGSESEEERVRDQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEE 205
Query: 70 GV-----VGKNEIGHLRKISRQEYLMRREQKKIQEIREEIENDRF---QPKRDRDEVIK- 129
V + K+++ LRK+SRQEYL +REQKK+ E+R+EIE++++ K E+ +
Sbjct: 206 AVRRANALEKDDLYSLRKVSRQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTETELREF 265
Query: 130 RYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRFSVAMQRYTDSSRNDK--- 189
RYKK++Y+LV D D + EG +Q+KRFSVA+QRY D +K
Sbjct: 266 RYKKELYDLVKKRTQDED-----------NVEEGGVDQEKRFSVAVQRYRDLDSTEKMNP 325
Query: 190 -----TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEFIKESVMESDEFLKAESVE 249
WE+HQ+ KAT+KFG+KNK+ + D+Y+FVFEDQI FIKESVM + + A +
Sbjct: 326 FAEQEAWEDHQIGKATLKFGAKNKQ--ASDDYQFVFEDQINFIKESVMAGENYEDAMDAK 385
Query: 250 MSKSN--ARSALEKLQEERKTLPIYPYRDQLLQAINDYQILVIVGETGSGKTTQIPQYLH 309
+ ++ALE+LQE R++LPIY YRDQLL+A+ ++Q+LVIVG+TGSGKTTQIPQYLH
Sbjct: 386 QKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLH 445
Query: 310 EAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 369
EAGYTKRGKVGCTQPRRVAAMS+A+RV+QE+GVKLGHEVGYSIRFEDCTSDKTVLKYMTD
Sbjct: 446 EAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 505
Query: 370 GMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAE 429
GMLLRE L EPDLASYSV+IVDEAHERTLSTD+LFGLVKDIARFRPDLKLLISSAT+DAE
Sbjct: 506 GMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAE 565
Query: 430 KFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPAGDILVFLTGQ 489
KFSDYFD APIF PGRRYPVEI +T APE DY+DAAIVT+L IH+ +P GDILVF TGQ
Sbjct: 566 KFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQ 625
Query: 490 EEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPKGARKVILATNIAE 549
EEIE AE ILKHR RGLGTKI ELIICP+YANLPSELQAKIFEPTP+GARKV+LATNIAE
Sbjct: 626 EEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAE 685
Query: 550 TSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGRTGPGMCFRLY 609
TSLTIDGIKYV+DPGF KMKSYNP+T MESL + PISKASA QRAGR GRT PG C+RLY
Sbjct: 686 TSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLY 745
Query: 610 TSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEALLEALELLFS 669
T+F Y+++LE+N PE+QRTNLA+VVL LKSLGI+DL FDFMD PP EAL+++LELLF+
Sbjct: 746 TAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFA 805
Query: 670 LNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLSVDGSIFYRPK 729
L ALNK GELTK GRRMAEFPLDPMLSKMIV S+K+KCS+E ISIAAMLS+ GSIFYRPK
Sbjct: 806 LGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPK 865
Query: 730 NKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVRSMKRARDIREQ 789
+KQVHADNA+MNFH GNVGDHIAL VY+SW+ETN+STQWCYENYIQVRSMKRARDIR+Q
Sbjct: 866 DKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQ 925
Query: 790 LEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHPQTVHIHPSSGL 849
LEGLL+RVEI++++N N+L++++K+I++GFFPH AKLQK+GSY+T+KHPQTVHIHP+SGL
Sbjct: 926 LEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGL 985
Query: 850 VQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQRKMPR 881
Q P+W++YH+LV TS+EYMRQVTELKPEWL+E+APHYY LKDVED +KMP+
Sbjct: 986 SQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKMPK 1027
BLAST of Sed0002514 vs. TAIR 10
Match:
AT2G35340.1 (helicase domain-containing protein )
HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 605/912 (66.34%), Postives = 736/912 (80.70%), Query Frame = 0
Query: 2 ESKRKLEIEDVEEVLVKRTRTS----------NLDEEEEERLRDRKEREQLEKNLRQRDA 61
+ +LE +D E V+V+ + + + E EEERLRD++ERE+LE++LR+RD
Sbjct: 129 KKSEQLEDDDDEVVIVREDKRNVRRKVSEDEDDGTESEEERLRDQREREELEQHLRERDT 188
Query: 62 VGTKNLFKKERSK----------GVVGKNEIGHLRKISRQEYLMRREQKKIQEIREEIEN 121
T+ L + + SK V K +I LRK S QEY+ +R+QKK+ E++++IE+
Sbjct: 189 ARTRKLTEPKMSKKEQEEFVRRDSAVDKGDIESLRKFSWQEYMKKRKQKKVLELKDDIED 248
Query: 122 DRF----QPKRDRDEVIKRYKKDVYELVTTNEADYDIHDRYRMPEAYDDHEGVPNQDKRF 181
+ + + +R+ RYK+++YEL+ + + D YRMP+AY D +G +Q+KRF
Sbjct: 249 EPYLFGDEKLTEREIREFRYKREIYELIKKSTQEEDNVGEYRMPDAY-DQQGSVDQEKRF 308
Query: 182 SVAMQRYTDSSRNDK--------TWEEHQLEKATMKFGSKNKKRASGDEYEFVFEDQIEF 241
+V++QRY D +K WE+HQ+E A +KFG+KNK+ D YEFVFEDQI+F
Sbjct: 309 AVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKNKE--VSDNYEFVFEDQIDF 368
Query: 242 IKESVMESDEFLKAESVEMSKSNA-RSALEKLQEERKTLPIYPYRDQLLQAINDYQILVI 301
IK SV+ D + + S+ +A +SA LQE+RK LPIY YRDQLL A+ D+Q+L+I
Sbjct: 369 IKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLII 428
Query: 302 VGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSI 361
VGETGSGKTTQIPQYLHEAGYTK GKVGCTQPRRVAAMS+A+RV+QE+G KLGHEVGYSI
Sbjct: 429 VGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSI 488
Query: 362 RFEDCTSDKTVLKYMTDGMLLREFLVEPDLASYSVIIVDEAHERTLSTDVLFGLVKDIAR 421
RFEDCTS+KT+LKYMTDGMLLRE L EPDL SYSVIIVDEAHERTL TD+LFGLVKDIAR
Sbjct: 489 RFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIAR 548
Query: 422 FRPDLKLLISSATLDAEKFSDYFDRAPIFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQ 481
RPDLKLLISSAT+DAEKFSD+FD+APIF+ PGRRYPV+I FT APE DY+DAAI TVL
Sbjct: 549 ARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLT 608
Query: 482 IHISKPAGDILVFLTGQEEIENAEGILKHRARGLGTKIAELIICPVYANLPSELQAKIFE 541
IH+ +P GD+LVFL GQEEIE E LKH+ RGLGTKI ELIICP+YANLPSELQAKIFE
Sbjct: 609 IHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFE 668
Query: 542 PTPKGARKVILATNIAETSLTIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQ 601
PTP+GARKV+LATNIAETSLTIDGIKYV+DPGF KMKSYNP+T MESL V PISKASA Q
Sbjct: 669 PTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQ 728
Query: 602 RAGRCGRTGPGMCFRLYTSFTYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFM 661
R GR GRT PG C+RLYT+F Y ++LEDN PEIQRTNLA+VVL+LKSLGI++L FDFM
Sbjct: 729 RTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFM 788
Query: 662 DQPPCEALLEALELLFSLNALNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAI 721
D PP EAL+++LELLF+L ALN+ GELTK GRRMAEFPLDPMLSKMIV S+K+KCS+E I
Sbjct: 789 DPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEII 848
Query: 722 SIAAMLSVDGSIFYRPKNKQVHADNAQMNFHRGNVGDHIALYNVYNSWRETNYSTQWCYE 781
SIAAMLS+ SIFYRPK+KQVHADNA NFH GNVGDHIA +YNSW+ETNYSTQWCYE
Sbjct: 849 SIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYE 908
Query: 782 NYIQVRSMKRARDIREQLEGLLKRVEIELTTNSNDLEAIKKTILSGFFPHAAKLQKDGSY 841
NYIQVRSMKRARDIR+QLEGLL+RVEI++++N+N+L++I+K+I++GFFPH AKLQK+GSY
Sbjct: 909 NYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSY 968
Query: 842 KTLKHPQTVHIHPSSGLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLK 881
+T+KHPQTVHIHP+SGL Q P+W++YH+LV TS+EYMRQVTELKPEWL+EIAPHYY LK
Sbjct: 969 RTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLK 1028
BLAST of Sed0002514 vs. TAIR 10
Match:
AT3G26560.1 (ATP-dependent RNA helicase, putative )
HSP 1 Score: 760.4 bits (1962), Expect = 1.6e-219
Identity = 365/638 (57.21%), Postives = 483/638 (75.71%), Query Frame = 0
Query: 240 LQEERKTLPIYPYRDQLLQAINDYQILVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQ 299
+QE+R++LPIY + +L+QA++D Q+LV++GETGSGKTTQ+ QYL EAGYT +GK+GCTQ
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567
Query: 300 PRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLVEPDLA 359
PRRVAAMS+A RV++E G +LG EVGY+IRFEDCT TV+KYMTDGMLLRE L++ +L+
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 360 SYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDRAPIFKI 419
YSVI++DEAHERT+ TDVLFGL+K + + R DL+L+++SATLDAEKFS YF IF I
Sbjct: 628 QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687
Query: 420 PGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPAGDILVFLTGQEEIENAEGILKHRA 479
PGR +PVEI +TK PE DYLDAA++TVLQIH+++P GDILVFLTGQEEI++A L R
Sbjct: 688 PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERM 747
Query: 480 RGLGTKIAELIICPVYANLPSELQAKIFEPTPKGARKVILATNIAETSLTIDGIKYVIDP 539
+GLG + ELII PVY+ LPSE+Q++IF+P P G RKV++ATNIAE SLTIDGI YV+DP
Sbjct: 748 KGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDP 807
Query: 540 GFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGRTGPGMCFRLYTSFTYSDELEDNMT 599
GF K YNPK +ESL + PIS+ASA QRAGR GRTGPG C+RLYT Y +E+
Sbjct: 808 GFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSI 867
Query: 600 PEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEALLEALELLFSLNALNKFGELTKLG 659
PEIQR NL LT+K++GINDL FDFMD P +AL+ A+E L+SL AL++ G LTKLG
Sbjct: 868 PEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLG 927
Query: 660 RRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLSVDGSIFYRPKNKQVHADNAQMNFH 719
R+MAEFPL+P LSKM++AS CS+E +++ AM+ G+IFYRP+ KQ AD + F
Sbjct: 928 RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQT-GNIFYRPREKQAQADQKRAKFF 987
Query: 720 RGNVGDHIALYNVYNSWRETNYSTQWCYENYIQVRSMKRARDIREQLEGLLKRVEIELTT 779
+ GDH+ L VY +W+ N+S WC+EN+IQ RS++RA+D+R+QL ++ + ++++ T
Sbjct: 988 QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVT 1047
Query: 780 NSNDLEAIKKTILSGFFPHAAKLQKDGSYKTLKHPQTVHIHPSSGLVQGFPKWIIYHKLV 839
+ I+K I +GFF H A+ Y+TL Q V+IHPSS L Q P W+IYH LV
Sbjct: 1048 AGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLV 1107
Query: 840 CTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQRK 878
T++EYMR+VT + P+WLVE+AP ++ + D + +RK
Sbjct: 1108 MTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRK 1143
BLAST of Sed0002514 vs. TAIR 10
Match:
AT3G62310.1 (RNA helicase family protein )
HSP 1 Score: 681.0 bits (1756), Expect = 1.3e-195
Identity = 348/654 (53.21%), Postives = 477/654 (72.94%), Query Frame = 0
Query: 242 EERKTLPIYPYRDQLLQAINDYQILVIVGETGSGKTTQIPQYLHEA----GYTKRGK--V 301
E+R+TLP++ +++ L+ +N+ Q L++VGETGSGKTTQIPQ++ +A KR K V
Sbjct: 56 EKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLV 115
Query: 302 GCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLVE 361
GCTQPRRVAAMS++ RV++E+ V +G EVGYSIRFEDC+S +TVLKY+TDGMLLRE + +
Sbjct: 116 GCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMAD 175
Query: 362 PDLASYSVIIVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDRAP 421
P L Y VII+DEAHERTL+TDVLFGL+K++ + RPDLKL++ SATL+AEKF DYF AP
Sbjct: 176 PLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAP 235
Query: 422 IFKIPGRRYPVEIRFTKAPEPDYLDAAIVTVLQIHISKPAGDILVFLTGQEEIENAEGIL 481
+ K+PGR +PVEI +T+ PE DYL+AAI TV+QIH+ +P GDILVFLTG+EEIE+A +
Sbjct: 236 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKI 295
Query: 482 KHRARGLGTKIAELIICPVYANLPSELQAKIFEPTPK-------GARKVILATNIAETSL 541
LG ++ + + P+Y+ LP +Q KIF+P P+ RK++++TNIAETSL
Sbjct: 296 NKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSL 355
Query: 542 TIDGIKYVIDPGFQKMKSYNPKTRMESLQVVPISKASANQRAGRCGRTGPGMCFRLYTSF 601
TIDGI YVIDPGF K K YNP+ R+ESL V PISKASA+QR+GR GRT PG CFRLYT
Sbjct: 356 TIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEK 415
Query: 602 TYSDELEDNMTPEIQRTNLANVVLTLKSLGINDLGKFDFMDQPPCEALLEALELLFSLNA 661
+++++L+ PEI R+NLAN VLTLK LGI+DL FDFMD P E L+ ALE+L L A
Sbjct: 416 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 475
Query: 662 LNKFGELTKLGRRMAEFPLDPMLSKMIVASEKFKCSNEAISIAAMLSVDGSIFYRPKNKQ 721
L+ G LTK G M+EFPLDP ++KM++ S +F CSNE +S++AMLSV + F RP+ Q
Sbjct: 476 LDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVP-NCFIRPREAQ 535
Query: 722 VHADNAQMNFHRGNV-GDHIALYNVYNSWRETNYSTQWCYENYIQVRSMKRARDIREQLE 781
AD A+ F G++ GDH+ L NVY+++++ N WCYEN+I R+MK A ++R+QL
Sbjct: 536 KAADEAKARF--GHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLV 595
Query: 782 GLLKRVEIELTT---NSNDLEA-IKKTILSGFFPHAAKLQKDGSYKTLKHPQTVHIHPSS 841
++ R +++ + NS D I+K +L+G+F A L++ G Y T+K Q VH+HPS+
Sbjct: 596 RIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSN 655
Query: 842 GLVQGFPKWIIYHKLVCTSREYMRQVTELKPEWLVEIAPHYYHLKDVEDLCQRK 878
L P+W+IY++ V TSR ++R VT+++ EWLV++A HYY L + + C+ K
Sbjct: 656 CL-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPN-CEAK 704
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022134864.1 | 0.0e+00 | 76.82 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica ... | [more] |
XP_038879655.1 | 0.0e+00 | 77.02 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >X... | [more] |
XP_008453258.1 | 0.0e+00 | 77.02 | PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis me... | [more] |
XP_011660328.1 | 0.0e+00 | 76.16 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis sativus] >KGN... | [more] |
KAG6587574.1 | 0.0e+00 | 76.57 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1, partial [Cucurbita ar... | [more] |
Match Name | E-value | Identity | Description | |
Q8VY00 | 0.0e+00 | 69.50 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thalian... | [more] |
F4IJV4 | 0.0e+00 | 66.34 | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsi... | [more] |
F4JMJ3 | 1.8e-287 | 60.09 | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 OS=Arabidopsi... | [more] |
Q54MH3 | 2.3e-271 | 56.29 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostel... | [more] |
Q767K6 | 4.7e-264 | 52.93 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa OX=9823 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BZI7 | 0.0e+00 | 76.82 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Momordic... | [more] |
A0A1S3BVU3 | 0.0e+00 | 77.02 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo OX=365... | [more] |
A0A0A0LUM2 | 0.0e+00 | 76.16 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012660 PE=4 SV=1 | [more] |
A0A6J1F0A9 | 0.0e+00 | 76.57 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbit... | [more] |
A0A5A7US39 | 0.0e+00 | 75.22 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo var. m... | [more] |