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Sed0002437 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCAACAGAACCACCAAAAATGAAAACCTCAAGCGTTTCTTCTCTCCTCGCCGCCGTCGCCATTATCGCCGCCCATTTTCTCCACTCATCGGCGACGGTCGTCGAATTCTCCGGCGTCAACAACCTCCTCTTCGTTCCGGCCAAATCCGAATGCAGAGGCTCCATCGCCGAGTGCTTCCTCGCCGGAGACGACGGCGACGGTTCCGCCTTCGGAATGGAGTTCGAAATGGACTCTGAGATCAATCGACGAATTCTAGCCACCACTCGCTACATCAGCTACGGCGCTATGAGAAGGAACAACGTTCCTTGCTCTCGCCGCGGTGCTTCGTACTACAACTGCAGGCCAGGCGCTCAGGCGAATCCGTACCGCCGCGGTTGCAGCGCAATTACTCGCTGCCGGAGTTAATCTCTAATCGCTCGATTACTTATTCGGATTTAGGTTCGTTCTTCGTATTCTATTCCTTCGGTTCTTTTGTGCGTTTATACAGAATATACTTATCGATTTGAGTAATAAGATCCATACTGATTGTTGAAATGTAATATAGATCTGTTTCTCTTGAGTTGTTTATATGAATTTTTTGTTCTTTTTAGTTTTCGTCGCTGATTCTGATTGTTTGTAGAATCGCTTGTTCTTGTTTGCAATTCGTAATACAGTGATAGGAAAGAACACAGTATCTGATTATTATTTTTTTCCTTCTTTTTTGTAATTTTCGTGGCTGATTCTGATTGTTTCTTGAA AACCAACAGAACCACCAAAAATGAAAACCTCAAGCGTTTCTTCTCTCCTCGCCGCCGTCGCCATTATCGCCGCCCATTTTCTCCACTCATCGGCGACGGTCGTCGAATTCTCCGGCGTCAACAACCTCCTCTTCGTTCCGGCCAAATCCGAATGCAGAGGCTCCATCGCCGAGTGCTTCCTCGCCGGAGACGACGGCGACGGTTCCGCCTTCGGAATGGAGTTCGAAATGGACTCTGAGATCAATCGACGAATTCTAGCCACCACTCGCTACATCAGCTACGGCGCTATGAGAAGGAACAACGTTCCTTGCTCTCGCCGCGGTGCTTCGTACTACAACTGCAGGCCAGGCGCTCAGGCGAATCCGTACCGCCGCGGTTGCAGCGCAATTACTCGCTGCCGGAGTTAATCTCTAATCGCTCGATTACTTATTCGGATTTAGGTTCGTTCTTCGTATTCTATTCCTTCGGTTCTTTTGTGCGTTTATACAGAATATACTTATCGATTTGAGTAATAAGATCCATACTGATTGTTGAAATGTAATATAGATCTGTTTCTCTTGAGTTGTTTATATGAATTTTTTGTTCTTTTTAGTTTTCGTCGCTGATTCTGATTGTTTGTAGAATCGCTTGTTCTTGTTTGCAATTCGTAATACAGTGATAGGAAAGAACACAGTATCTGATTATTATTTTTTTCCTTCTTTTTTGTAATTTTCGTGGCTGATTCTGATTGTTTCTTGAA ATGAAAACCTCAAGCGTTTCTTCTCTCCTCGCCGCCGTCGCCATTATCGCCGCCCATTTTCTCCACTCATCGGCGACGGTCGTCGAATTCTCCGGCGTCAACAACCTCCTCTTCGTTCCGGCCAAATCCGAATGCAGAGGCTCCATCGCCGAGTGCTTCCTCGCCGGAGACGACGGCGACGGTTCCGCCTTCGGAATGGAGTTCGAAATGGACTCTGAGATCAATCGACGAATTCTAGCCACCACTCGCTACATCAGCTACGGCGCTATGAGAAGGAACAACGTTCCTTGCTCTCGCCGCGGTGCTTCGTACTACAACTGCAGGCCAGGCGCTCAGGCGAATCCGTACCGCCGCGGTTGCAGCGCAATTACTCGCTGCCGGAGTTAA MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRRGASYYNCRPGAQANPYRRGCSAITRCRS Homology
BLAST of Sed0002437 vs. NCBI nr
Match: XP_038875155.1 (protein RALF-like 33 [Benincasa hispida]) HSP 1 Score: 211.1 bits (536), Expect = 5.7e-51 Identity = 110/128 (85.94%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of Sed0002437 vs. NCBI nr
Match: KAG6575064.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49 Identity = 104/128 (81.25%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of Sed0002437 vs. NCBI nr
Match: XP_023547686.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 204.9 bits (520), Expect = 4.1e-49 Identity = 103/128 (80.47%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of Sed0002437 vs. NCBI nr
Match: XP_022959207.1 (protein RALF-like 33 [Cucurbita moschata]) HSP 1 Score: 204.1 bits (518), Expect = 7.0e-49 Identity = 103/128 (80.47%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of Sed0002437 vs. NCBI nr
Match: XP_023006467.1 (protein RALF-like 33 [Cucurbita maxima]) HSP 1 Score: 203.4 bits (516), Expect = 1.2e-48 Identity = 103/128 (80.47%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of Sed0002437 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.5e-33 Identity = 80/135 (59.26%), Postives = 96/135 (71.11%), Query Frame = 0
BLAST of Sed0002437 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 3.6e-32 Identity = 78/127 (61.42%), Postives = 90/127 (70.87%), Query Frame = 0
BLAST of Sed0002437 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26 Identity = 70/125 (56.00%), Postives = 85/125 (68.00%), Query Frame = 0
BLAST of Sed0002437 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 4.3e-25 Identity = 58/86 (67.44%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of Sed0002437 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 8.1e-24 Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 0
BLAST of Sed0002437 vs. ExPASy TrEMBL
Match: A0A6J1H3W7 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 3.4e-49 Identity = 103/128 (80.47%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of Sed0002437 vs. ExPASy TrEMBL
Match: A0A6J1KVY0 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 5.8e-49 Identity = 103/128 (80.47%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of Sed0002437 vs. ExPASy TrEMBL
Match: A0A6J1KG89 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 7.6e-49 Identity = 104/128 (81.25%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of Sed0002437 vs. ExPASy TrEMBL
Match: A0A6J1EV64 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111436882 PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.7e-48 Identity = 103/128 (80.47%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of Sed0002437 vs. ExPASy TrEMBL
Match: A0A6J1C9N4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 5.4e-47 Identity = 102/128 (79.69%), Postives = 110/128 (85.94%), Query Frame = 0
BLAST of Sed0002437 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 ) HSP 1 Score: 142.9 bits (359), Expect = 1.8e-34 Identity = 80/135 (59.26%), Postives = 96/135 (71.11%), Query Frame = 0
BLAST of Sed0002437 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 ) HSP 1 Score: 139.0 bits (349), Expect = 2.6e-33 Identity = 78/127 (61.42%), Postives = 90/127 (70.87%), Query Frame = 0
BLAST of Sed0002437 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 ) HSP 1 Score: 115.5 bits (288), Expect = 3.1e-26 Identity = 58/86 (67.44%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of Sed0002437 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 ) HSP 1 Score: 111.3 bits (277), Expect = 5.8e-25 Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 0
BLAST of Sed0002437 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 ) HSP 1 Score: 91.3 bits (225), Expect = 6.2e-19 Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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