Sed0002408 (gene) Chayote v1

Overview


Name	Sed0002408
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S acidic ribosomal protein P0
Location	LG04: 40585171 .. 40588176 (-)
RNA-Seq Expression	Sed0002408
Synteny	Sed0002408

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCCTTTGAGCTTCTCTTCGTCTGCCAAAACCCTAAAAAAAACCCTAACCTTCGTAGCATTACAGAGAGGTTAAAGAGACGGCGAAGATTCAGCTGTCCGCCTTGACAGAGCTCTCGGCTTCGTCTTGGCCCTCAGTTTTGCCCTTTTTTTCAATCTTCCATTAACCCATTTTTTGCTGTATCTAGATTTTTCTTCAGAAACCCATTTCAATGGCGGTGAAACCATCCAAGGCTCAGAAGAAGGTCGCTTACGACGCCAAGCTCTGCCAGCTCCTCGACGAATTCGGTCAGGTCTTGATTGTCGCCGCCGACAATGTAGGGTCCAACCAGCTTCAGAACATTAGGAAGGGTCTACGTGGTGACTCTGTCGTGCTCATGGGAAAAAACACCATGATGAAGCGCTCTGTCAGGATCCACTCTGAGAAGACGGGGAACAAGGCTTACCTTAATCTTCTCCCTCTTCTTGTGGTAAGTTAGTTACAGCATGTAATGTCTTAACATATATCTCCAGGATCGATTATGAATATAATTGTTTTTTTAACCTTATCTTGGCTGAGCATTGAAGAATTTTAAAAGAGAAATTCTAAATGTAGAAATAAGATGAAAACATACGGAAATTGATTTGTGTGGCCAGTAATTTCGCACCCTTGAATGTGAGAGAAATGGCTAATATACTCACTCTTGTATGCAATAATCACTAGAAATACAAGGTCTTTTTTATGTTTTTGAGTTTTGTTTTTATTGATTTAGGGTTTAGCTTCGTGTTTTTTTGGGAATCGAGTAGTAATTCAGGCAGCACCTATGCCTTTTCTATGGTAAAGAGTGCGTTTAACTGCTCGTAGATTGAATTGATTTTGCTCTTCAGATTTGCTGAGATTTCCTTTGAAGCTGGTCTAGTAAGCATTCGTACATTTTTTGCTTTATCTTTTTTTAAAGAAATCAGTGTCACGGTTTTTTTGAATTAATTGTTGTTTTAACAATTTTTTAAAAAGAAATGACCGAGTTTTAATTTGTAATGGAGGATAACTCATAATTAACATATTTGCTAACTGGAATTGACTATAATAGAATTATGTACTTGAATGTCTGTTTACATTTTGGTTACTCATCCTGTAACAAGGCGTTTGGCATTGTACCTCTGAATTTATATTATTCTGTAGTTTTTTGTTTGAATTTCTGCTTGTAATTTTTGCTGTCTAATAGAACGTTTGCTTAGTACCTTTGTGTTTGACTTAATTAGGGAAATGTTGGTTTGATCTTTACCAAGGGTGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTGCGCCGTTTAGTTGTTGCTGTTCTTTCTTATCTTTGCATTGGCTTCTTTCTGACTTAATTTCACCTATGGATTAACAAAATTAATTTTGAGATTTTAACCATGATTTTGTTTAATGTTAAATGATTGTACATTAAAATAAATATTTCGTATTGTTAAATTATCCCGTCTTCATTTGATTTATTGTTGTAGCTAGTCTTTAGATACTGCTATTATGTATTTTGTGGCGGTGAACATTTAACACAGCTTTGAGGTGACTTTCAAGTTTATTGACACATTATTAAATTGTCAATTTTGGATTGGATGAATAGTCCAAGGAGCTTTATGCTGGCCGAAGAGTTTAAACTGATACCCTTGCTGGTGATAGAGGTCTCAAGCAACTTGATGTATATTAAGTTGTAATCTTTACATAATAAAAGCATTCTTGTCACATTTGTCTATTGTGGGTATCTCAATTTGATGGAGATAATATAGGGGATCCATTTTCTTAATTCTCTCACTATCTTCCATGAGTTAGGGTTGGGTAATTTTTCTTCCTTGTTAGATATATATAGTCTTCCATGAGTTAGGGATGTTCTGTTTTTTTTTTCAGTGTTTGATGTCTAGATTGTTATATATCATTGAAGCTCAAAGTGTCTTTACATTCTTACTATTTCCACCTCATGTAGGTTGGAGCCCCTGCTCGTGTTGGATTGGTTGCTCCCATTGATGTCATTGTCCCACCAGGCAACACTGGGCTTGATCCATCTCAGACTTCTTTCTTCCAGGTTTGTAAATTTGATTACAAAGTTATCCCCCTTTCAACATAAATAGAATATAAAATTTTGAATTCTTCTTGCAGGTTCTTAACATTCCTACCAAGATTAACAAGGGAACTGTCGAAATTATTACACCCGTGGAGCTTATTAAGAAGGGTGAGAAGGTTGGATCTTCGGAGGCTGCTCTCCTTGCCAAGCTAGGAATCAGGCCATTCTCATATGGTCTTGTTGTTATATCGGTTTATGATAATGGTTCAGTCTTCCACCCCGAGGTTCTTGATCTGACTGAGGACGATCTCCTTGAGAAGTTTGCAATGGGTGTTTCCATGGTCACATCCTTGTCAATGGCCATTTCATACCCAACTCTGGCTGCTGCACCACACATGCTCATCAATGCATACAAAAATCTTCTTGCCGTTGCAGTCGCCACCGACTACTCATTCCCTCAGGCTGAGAAAGTTAAGGAGTATCTCGAGGTATGCAAGATCTCAGCTTCCTTTTCGTACGTAGAAGTTTATCAGGTTTTGTTGTTGTTGCAACTAATTATCAATTGCTGCTCTTGTAATTGTTCAGGATCCTAGCAAGTTTGCTGTGGCTGTGGCTGTGTCTGCAGTTGCTGATTCTGGCTCTGCCCCAGCAGCTGCGGCAGCAGCAGAGGAGAAGAAGGAAGAGCCAGCAGAAGAGTCTGATGATGATATGGGTTTCAGCTTGTTTGATTAAGCTGTATGTTACAGATTTTATAACTTTTATGTTTATGGTTCAATTAGACACGCCGGAGTTATCATTATGTTTATCAGAGTTGTTTTAATTAAGCAGGATCTCACAGTTTATTATGATTATTATTATTATTATTTATCTTTTTTCAATGAAATGTTCTTTATTTAATTTCTGCAAGAAATTGACATGTAGCATTGAAATATTTTTTGTAGTTCAGTCAC

mRNA sequence

GCGCCTTTGAGCTTCTCTTCGTCTGCCAAAACCCTAAAAAAAACCCTAACCTTCGTAGCATTACAGAGAGGTTAAAGAGACGGCGAAGATTCAGCTGTCCGCCTTGACAGAGCTCTCGGCTTCGTCTTGGCCCTCAGTTTTGCCCTTTTTTTCAATCTTCCATTAACCCATTTTTTGCTGTATCTAGATTTTTCTTCAGAAACCCATTTCAATGGCGGTGAAACCATCCAAGGCTCAGAAGAAGGTCGCTTACGACGCCAAGCTCTGCCAGCTCCTCGACGAATTCGGTCAGGTCTTGATTGTCGCCGCCGACAATGTAGGGTCCAACCAGCTTCAGAACATTAGGAAGGGTCTACGTGGTGACTCTGTCGTGCTCATGGGAAAAAACACCATGATGAAGCGCTCTGTCAGGATCCACTCTGAGAAGACGGGGAACAAGGCTTACCTTAATCTTCTCCCTCTTCTTGTGGGAAATGTTGGTTTGATCTTTACCAAGGGTGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGATTGGTTGCTCCCATTGATGTCATTGTCCCACCAGGCAACACTGGGCTTGATCCATCTCAGACTTCTTTCTTCCAGGTTCTTAACATTCCTACCAAGATTAACAAGGGAACTGTCGAAATTATTACACCCGTGGAGCTTATTAAGAAGGGTGAGAAGGTTGGATCTTCGGAGGCTGCTCTCCTTGCCAAGCTAGGAATCAGGCCATTCTCATATGGTCTTGTTGTTATATCGGTTTATGATAATGGTTCAGTCTTCCACCCCGAGGTTCTTGATCTGACTGAGGACGATCTCCTTGAGAAGTTTGCAATGGGTGTTTCCATGGTCACATCCTTGTCAATGGCCATTTCATACCCAACTCTGGCTGCTGCACCACACATGCTCATCAATGCATACAAAAATCTTCTTGCCGTTGCAGTCGCCACCGACTACTCATTCCCTCAGGCTGAGAAAGTTAAGGAGTATCTCGAGGATCCTAGCAAGTTTGCTGTGGCTGTGGCTGTGTCTGCAGTTGCTGATTCTGGCTCTGCCCCAGCAGCTGCGGCAGCAGCAGAGGAGAAGAAGGAAGAGCCAGCAGAAGAGTCTGATGATGATATGGGTTTCAGCTTGTTTGATTAAGCTGTATGTTACAGATTTTATAACTTTTATGTTTATGGTTCAATTAGACACGCCGGAGTTATCATTATGTTTATCAGAGTTGTTTTAATTAAGCAGGATCTCACAGTTTATTATGATTATTATTATTATTATTTATCTTTTTTCAATGAAATGTTCTTTATTTAATTTCTGCAAGAAATTGACATGTAGCATTGAAATATTTTTTGTAGTTCAGTCAC

Coding sequence (CDS)

ATGGCGGTGAAACCATCCAAGGCTCAGAAGAAGGTCGCTTACGACGCCAAGCTCTGCCAGCTCCTCGACGAATTCGGTCAGGTCTTGATTGTCGCCGCCGACAATGTAGGGTCCAACCAGCTTCAGAACATTAGGAAGGGTCTACGTGGTGACTCTGTCGTGCTCATGGGAAAAAACACCATGATGAAGCGCTCTGTCAGGATCCACTCTGAGAAGACGGGGAACAAGGCTTACCTTAATCTTCTCCCTCTTCTTGTGGGAAATGTTGGTTTGATCTTTACCAAGGGTGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGATTGGTTGCTCCCATTGATGTCATTGTCCCACCAGGCAACACTGGGCTTGATCCATCTCAGACTTCTTTCTTCCAGGTTCTTAACATTCCTACCAAGATTAACAAGGGAACTGTCGAAATTATTACACCCGTGGAGCTTATTAAGAAGGGTGAGAAGGTTGGATCTTCGGAGGCTGCTCTCCTTGCCAAGCTAGGAATCAGGCCATTCTCATATGGTCTTGTTGTTATATCGGTTTATGATAATGGTTCAGTCTTCCACCCCGAGGTTCTTGATCTGACTGAGGACGATCTCCTTGAGAAGTTTGCAATGGGTGTTTCCATGGTCACATCCTTGTCAATGGCCATTTCATACCCAACTCTGGCTGCTGCACCACACATGCTCATCAATGCATACAAAAATCTTCTTGCCGTTGCAGTCGCCACCGACTACTCATTCCCTCAGGCTGAGAAAGTTAAGGAGTATCTCGAGGATCCTAGCAAGTTTGCTGTGGCTGTGGCTGTGTCTGCAGTTGCTGATTCTGGCTCTGCCCCAGCAGCTGCGGCAGCAGCAGAGGAGAAGAAGGAAGAGCCAGCAGAAGAGTCTGATGATGATATGGGTTTCAGCTTGTTTGATTAA

Protein sequence

MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAAPHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAAEEKKEEPAEESDDDMGFSLFD

Homology

[Close]

BLAST of Sed0002408 vs. NCBI nr
Match: XP_038892643.1 (60S acidic ribosomal protein P0 [Benincasa hispida])

HSP 1 Score: 580.9 bits (1496), Expect = 6.9e-162
Identity = 306/321 (95.33%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDE+ QVL+VAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSE+TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV+SVYDNGSVF PEVLDLTEDDLLEKFA+GVSMVTSLS+AISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA ADSG+APAAAAA 
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAAADSGAAPAAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEPAEESDDDMGFSLFD
Sbjct: 301 EEKKEEPAEESDDDMGFSLFD 321

[Close]

BLAST of Sed0002408 vs. NCBI nr
Match: XP_022957404.1 (60S acidic ribosomal protein P0 [Cucurbita moschata] >KAG6600936.1 hypothetical protein SDJN03_06169, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031572.1 hypothetical protein SDJN02_05613 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 577.0 bits (1486), Expect = 1.0e-160
Identity = 307/321 (95.64%), Postives = 316/321 (98.44%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDE+ QVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV+SVYDNGSVF PEVLDLTEDDLLEKFAMGVSMVTSLS+A+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA ADSG+APAAAAA 
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA-ADSGAAPAAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEPAEESDDDMGFSLFD
Sbjct: 301 EEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0002408 vs. NCBI nr
Match: XP_022987157.1 (60S acidic ribosomal protein P0 [Cucurbita maxima])

HSP 1 Score: 575.9 bits (1483), Expect = 2.2e-160
Identity = 306/321 (95.33%), Postives = 316/321 (98.44%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDE+ QVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV+SVYDNGSVF PEVLDLTEDDLLEKFA+GVSMVTSLS+A+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA ADSG+APAAAAA 
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA-ADSGAAPAAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEPAEESDDDMGFSLFD
Sbjct: 301 EEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0002408 vs. NCBI nr
Match: XP_023534812.1 (60S acidic ribosomal protein P0 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 572.0 bits (1473), Expect = 3.2e-159
Identity = 307/324 (94.75%), Postives = 317/324 (97.84%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDE+ QVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV+SVYDNGSVF PEVLDLTEDDLLEKFAMGVSMVTSLS+A+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA ADSG+APAAAAAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA-ADSGAAPAAAAAA 300

Query: 301 ---EEKKEEPAEESDDDMGFSLFD 322
              EEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AAVEEKKDEPAEESDDDMGFSLFD 323

[Close]

BLAST of Sed0002408 vs. NCBI nr
Match: XP_022156911.1 (60S acidic ribosomal protein P0 [Momordica charantia])

HSP 1 Score: 570.5 bits (1469), Expect = 9.3e-159
Identity = 303/321 (94.39%), Postives = 316/321 (98.44%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDE+ QVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVR+HSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV +VYDNGSVF PEVLD+TEDDLLEKFA+GVSMVTSL++AIS+PTLAAA
Sbjct: 181 LGIRPFSYGLVVQTVYDNGSVFSPEVLDMTEDDLLEKFALGVSMVTSLALAISFPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA AD+GSAPAAAAA 
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA-ADTGSAPAAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEPAEESDDD+GFSLFD
Sbjct: 301 EEKKEEPAEESDDDLGFSLFD 320

[Close]

BLAST of Sed0002408 vs. ExPASy Swiss-Prot
Match: P50346 (60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 7.5e-151
Identity = 279/321 (86.92%), Postives = 304/321 (94.70%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA K +KA+KK+AYDAKLC L++E+GQ+L+V +DNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVR+H+EKTGN AYLNL+PLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+KG+KVGSSEAALLAK
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV+SVYDNGSVF PEVLDLTEDDL+ KFA GVSMVTSLS+AISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHM +NAYKN+LAVAV TDYSFP+A+KVKEYL+DPSKFAVA AV+A A +  APAAAA  
Sbjct: 241 PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVA-AVAAPAAASGAPAAAAKE 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEPAEESDDDMGFSLFD
Sbjct: 301 EEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0002408 vs. ExPASy Swiss-Prot
Match: O04204 (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.2e-140
Identity = 262/320 (81.88%), Postives = 293/320 (91.56%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVK +KA+KK+ YD+KLCQLL+E+ Q+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH++KTGN+A+L+LLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV SVYDNGSVF+PEVL+LTEDDL+EKFA GVSM+T+LS+AISYPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHM +NAYKN+LAVA+AT+YSFPQAE VKE+L+DP+KFAVAVA     +SG A  A A  
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAV- 300

Query: 301 EEKKEEPAEESDDDMGFSLF 321
              +EE AEESD DMGF LF
Sbjct: 301 ---EEEAAEESDGDMGFDLF 316

[Close]

BLAST of Sed0002408 vs. ExPASy Swiss-Prot
Match: P57691 (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 4.5e-140
Identity = 265/320 (82.81%), Postives = 290/320 (90.62%), Query Frame = 0


Query: 3   VKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMM 62
           VK +KA+KK+AYD KLCQL+DE+ Q+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE +GN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVF PEVLDLTED L+EKFA G+SMVTSL++A+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAV-AVAVSAVADSGSAPAAAAAAE 302
           M INAYKN LA+AVATDY+FPQAEKVKE+L+DPSKF V A AVSA A  GSA A AAA  
Sbjct: 242 MFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKV 301

Query: 303 EKKEEPAEESDDDMGFSLFD 322
           E+K+E ++E D + GF LFD
Sbjct: 302 EEKKEESDEEDYEGGFGLFD 321

[Close]

BLAST of Sed0002408 vs. ExPASy Swiss-Prot
Match: P41095 (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP0 PE=1 SV=3)

HSP 1 Score: 495.4 bits (1274), Expect = 5.0e-139
Identity = 253/321 (78.82%), Postives = 291/321 (90.65%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA+K +KA+KKVAYD KLCQLLDE+ +VLI  ADNVGSNQLQ IRKGLRGDS+VLMGKNT
Sbjct: 1   MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           +++R +++H++ TGNK +L L+PLLVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           P+DV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSE+ALLAK
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLV+ +VYD+GSVF PEVLDLTEDDL+EKFA GVSMV S+S+AISYPT+AAA
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHM +N YKN+LAVAV T+YS+P A+K+KEYL+DPSKFAVA  V+  ADSG+A  +AA  
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVA--ADSGAAAPSAAKE 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEP EESD D+G SLFD
Sbjct: 301 EEKKEEPEEESDGDLGMSLFD 319

[Close]

BLAST of Sed0002408 vs. ExPASy Swiss-Prot
Match: P50345 (60S acidic ribosomal protein P0 OS=Lupinus luteus OX=3873 PE=2 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 1.9e-138
Identity = 263/322 (81.68%), Postives = 291/322 (90.37%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA K +KA+KK+ YD KLCQLLDE+ Q+L+V ADNVGS QLQNIR+GLRGDSVVLMGKNT
Sbjct: 1   MAPKATKAEKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+EKTGN+A+LNL+PLL+GNVGLIFTKG LKEVSEEVAKYKVGAPA VGLVA
Sbjct: 61  MMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPACVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV+SVYDNGSVF PEVLDLTEDDLLEKFA+GVS       +   P  +AA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFKPEVLDLTEDDLLEKFAIGVSQCYFSDTSHFIPNPSAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKF-AVAVAVSAVADSGSAPAAAAA 300
           PH+ INAYKN+LAVAVAT+YSFPQA++VKEYL+DPSKF AVA A +  ADSG+APAAAA 
Sbjct: 241 PHVFINAYKNVLAVAVATEYSFPQADEVKEYLKDPSKFAAVAAAAAPAADSGAAPAAAAK 300

Query: 301 AEEKKEEPAEESDDDMGFSLFD 322
           A EK+EEPAEESDD+MGF LFD
Sbjct: 301 A-EKEEEPAEESDDEMGFGLFD 321

[Close]

BLAST of Sed0002408 vs. ExPASy TrEMBL
Match: A0A6J1H1U9 (60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111458814 PE=3 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.8e-161
Identity = 307/321 (95.64%), Postives = 316/321 (98.44%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDE+ QVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV+SVYDNGSVF PEVLDLTEDDLLEKFAMGVSMVTSLS+A+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA ADSG+APAAAAA 
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA-ADSGAAPAAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEPAEESDDDMGFSLFD
Sbjct: 301 EEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0002408 vs. ExPASy TrEMBL
Match: A0A6J1J9L0 (60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111484789 PE=3 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-160
Identity = 306/321 (95.33%), Postives = 316/321 (98.44%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDE+ QVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV+SVYDNGSVF PEVLDLTEDDLLEKFA+GVSMVTSLS+A+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA ADSG+APAAAAA 
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA-ADSGAAPAAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEPAEESDDDMGFSLFD
Sbjct: 301 EEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0002408 vs. ExPASy TrEMBL
Match: A0A6J1DWE3 (60S acidic ribosomal protein P0 OS=Momordica charantia OX=3673 GN=LOC111023743 PE=3 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.5e-159
Identity = 303/321 (94.39%), Postives = 316/321 (98.44%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDE+ QVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVR+HSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV +VYDNGSVF PEVLD+TEDDLLEKFA+GVSMVTSL++AIS+PTLAAA
Sbjct: 181 LGIRPFSYGLVVQTVYDNGSVFSPEVLDMTEDDLLEKFALGVSMVTSLALAISFPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA AD+GSAPAAAAA 
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSA-ADTGSAPAAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEPAEESDDD+GFSLFD
Sbjct: 301 EEKKEEPAEESDDDLGFSLFD 320

[Close]

BLAST of Sed0002408 vs. ExPASy TrEMBL
Match: A0A5D3BEN1 (60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00300 PE=3 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 5.9e-159
Identity = 301/321 (93.77%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA+KP+KA+KKVAYD+KLCQLLDE+ QVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSE+TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV+SVYDNGSVF P+VLDLTEDDLLEKFA+GVSMVTSLS+AISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHMLINAYKNLLAVAVATDYSFP+AEKVKEYL DPSKFAVAVAVSA ADSGSAP AAAA 
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPEAEKVKEYLADPSKFAVAVAVSA-ADSGSAPEAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEPAEESDDDMGFSLFD
Sbjct: 301 EEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0002408 vs. ExPASy TrEMBL
Match: A0A0A0KM27 (60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_5G199310 PE=3 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 5.9e-159
Identity = 301/321 (93.77%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA+KP+KA+KKVAYD+KLCQLLDE+ QVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSE+TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV+SVYDNGSVF P+VLDLTEDDLLEKFA+GVSMVTSLS+AISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYL DPSKFAVAVAVS+ ADSGSAP AAAA 
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSS-ADSGSAPEAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 322
           EEKKEEPAEESDDDMGFSLFD
Sbjct: 301 EEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0002408 vs. TAIR 10
Match: AT2G40010.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 500.7 bits (1288), Expect = 8.5e-142
Identity = 262/320 (81.88%), Postives = 293/320 (91.56%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVK +KA+KK+ YD+KLCQLL+E+ Q+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH++KTGN+A+L+LLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV SVYDNGSVF+PEVL+LTEDDL+EKFA GVSM+T+LS+AISYPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAA 300
           PHM +NAYKN+LAVA+AT+YSFPQAE VKE+L+DP+KFAVAVA     +SG A  A A  
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAV- 300

Query: 301 EEKKEEPAEESDDDMGFSLF 321
              +EE AEESD DMGF LF
Sbjct: 301 ---EEEAAEESDGDMGFDLF 316

[Close]

BLAST of Sed0002408 vs. TAIR 10
Match: AT3G11250.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 498.8 bits (1283), Expect = 3.2e-141
Identity = 265/320 (82.81%), Postives = 290/320 (90.62%), Query Frame = 0


Query: 3   VKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMM 62
           VK +KA+KK+AYD KLCQL+DE+ Q+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE +GN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVF PEVLDLTED L+EKFA G+SMVTSL++A+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAV-AVAVSAVADSGSAPAAAAAAE 302
           M INAYKN LA+AVATDY+FPQAEKVKE+L+DPSKF V A AVSA A  GSA A AAA  
Sbjct: 242 MFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKV 301

Query: 303 EKKEEPAEESDDDMGFSLFD 322
           E+K+E ++E D + GF LFD
Sbjct: 302 EEKKEESDEEDYEGGFGLFD 321

[Close]

BLAST of Sed0002408 vs. TAIR 10
Match: AT3G09200.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 492.3 bits (1266), Expect = 3.0e-139
Identity = 261/319 (81.82%), Postives = 284/319 (89.03%), Query Frame = 0


Query: 3   VKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMM 62
           VK +KA+KK+AYD KLCQL+DE+ Q+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE TGN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVF PEVLDLTED L+EKFA G+SMVTSL++A+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAAEE 302
           M INAYKN LA+AVAT+Y+FPQAEKVKEYL+DPSKFAVA   +  AD+G    AAA  EE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEE 301

Query: 303 KKEEPAEESDDDMGFSLFD 322
           K+E   E+   D  F LFD
Sbjct: 302 KEESDEEDYGGD--FGLFD 318

[Close]

BLAST of Sed0002408 vs. TAIR 10
Match: AT3G09200.2 (Ribosomal protein L10 family protein )

HSP 1 Score: 416.0 bits (1068), Expect = 2.7e-116
Identity = 229/319 (71.79%), Postives = 252/319 (79.00%), Query Frame = 0


Query: 3   VKPSKAQKKVAYDAKLCQLLDEFGQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMM 62
           VK +KA+KK+AYD KLCQL+DE+ Q+L+                                
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILV-------------------------------- 61

Query: 63  KRSVRIHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
            RSVRIHSE TGN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  -RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVISVYDNGSVFHPEVLDLTEDDLLEKFAMGVSMVTSLSMAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVF PEVLDLTED L+EKFA G+SMVTSL++A+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAVADSGSAPAAAAAAEE 302
           M INAYKN LA+AVAT+Y+FPQAEKVKEYL+DPSKFAVA   +  AD+G    AAA  EE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEE 285

Query: 303 KKEEPAEESDDDMGFSLFD 322
           K+E   E+   D  F LFD
Sbjct: 302 KEESDEEDYGGD--FGLFD 285

[Close]

BLAST of Sed0002408 vs. TAIR 10
Match: AT4G00810.1 (60S acidic ribosomal protein family )

HSP 1 Score: 44.7 bits (104), Expect = 1.7e-04
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 282 VAVSAVADSGSAPAAAAAAEEKKEEPAEESDDDMGFSLFD 322
           V+ +A A +G A AAA A EEKK+EPAEESD D+GF LFD
Sbjct: 74  VSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

The following BLAST results are available for this feature:

BLAST of Sed0002408 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892643.1	6.9e-162	95.33	60S acidic ribosomal protein P0 [Benincasa hispida]	[more]
XP_022957404.1	1.0e-160	95.64	60S acidic ribosomal protein P0 [Cucurbita moschata] >KAG6600936.1 hypothetical ...	[more]
XP_022987157.1	2.2e-160	95.33	60S acidic ribosomal protein P0 [Cucurbita maxima]	[more]
XP_023534812.1	3.2e-159	94.75	60S acidic ribosomal protein P0 [Cucurbita pepo subsp. pepo]	[more]
XP_022156911.1	9.3e-159	94.39	60S acidic ribosomal protein P0 [Momordica charantia]	[more]

BLAST of Sed0002408 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50346	7.5e-151	86.92	60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1	[more]
O04204	1.2e-140	81.88	60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 ...	[more]
P57691	4.5e-140	82.81	60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 ...	[more]
P41095	5.0e-139	78.82	60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP...	[more]
P50345	1.9e-138	81.68	60S acidic ribosomal protein P0 OS=Lupinus luteus OX=3873 PE=2 SV=1	[more]

BLAST of Sed0002408 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1U9	4.8e-161	95.64	60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111458814 PE...	[more]
A0A6J1J9L0	1.1e-160	95.33	60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111484789 PE=3...	[more]
A0A6J1DWE3	4.5e-159	94.39	60S acidic ribosomal protein P0 OS=Momordica charantia OX=3673 GN=LOC111023743 P...	[more]
A0A5D3BEN1	5.9e-159	93.77	60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KM27	5.9e-159	93.77	60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_5G199310 PE=3 ...	[more]

BLAST of Sed0002408 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40010.1	8.5e-142	81.88	Ribosomal protein L10 family protein	[more]
AT3G11250.1	3.2e-141	82.81	Ribosomal protein L10 family protein	[more]
AT3G09200.1	3.0e-139	81.82	Ribosomal protein L10 family protein	[more]
AT3G09200.2	2.7e-116	71.79	Ribosomal protein L10 family protein	[more]
AT4G00810.1	1.7e-04	65.00	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043164	50S ribosomal protein L10, insertion domain superfamily	GENE3D	3.90.105.20		coord: 114..185 e-value: 1.6E-33 score: 116.2
IPR040637	60S ribosomal protein L10P, insertion domain	PFAM	PF17777	RL10P_insert	coord: 114..183 e-value: 7.4E-21 score: 73.9
IPR030670	60S acidic ribosomal protein P0	PIRSF	PIRSF039087	L10E	coord: 1..321 e-value: 2.0E-133 score: 442.2
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 234..320 e-value: 5.4E-21 score: 75.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..321
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..321
None	No IPR available	PANTHER	PTHR45699:SF18	60S ACIDIC RIBOSOMAL PROTEIN P0-1	coord: 1..321
None	No IPR available	PANTHER	PTHR45699	60S ACIDIC RIBOSOMAL PROTEIN P0	coord: 1..321
None	No IPR available	CDD	cd05795	Ribosomal_P0_L10e	coord: 9..185 e-value: 1.39598E-85 score: 253.265
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 7..108 e-value: 5.3E-18 score: 65.0
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 6..209 e-value: 2.4E-46 score: 158.9
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 9..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002408.1	Sed0002408.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome