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Sed0002366 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAAAACAATGAAATGTTTTTGGAAAAAAGGAAGAAAGGAATAGTAATACCCGAGCAGCGATGTTTATGGTTGAAGGGGAAAGCAGTGCCTGAAGGGGACGCAGGTTCAGTTGGGCGAGAAGTGGATAAGAGCGACGAAGGAGACAATGGAAATTGCGGCTTCCAACTTTTTTCTTACTCCAAATCCCAATCCGAAGGTCAAAACCATCCATCTTCTCCGCTGTTTCTCTGTTCATATTCGATCTTCTCATTTCTTCATTTTAGGTTATTTGTCATAAGAGGATTCTTCGTTATTGCTTTATTCCAAACCTCGCCTGCAATCGCGTGTTTTTTCCCACGCAAATTGGGCTCAGTAGTACAAAATGTTCTTTCAGGTAATTTCTATATTATTTTACCCATTTACTCATAGGATGAAGCTAATTGGTTGACCATTGAACACTTGAACGATTTACTAGGAAATTTTAACTTCTAATCTGGGTTCGACTGAAAATTTCATATGCAAATCCCAACTCTCATCTCAATGAGCTACAAAAAAGACCACCAAGAGTAGAAACATAGCAAAAATGTAATACAAAAACGAACGCCAACCCTTTGCCTTTAAATTTGGTGGATACAATTTTATCATTTGCCTTTTGTTGTTTCACCACGAATCGGTAAATTTAAGTCTCGTTTGGTAACTATTTGGTTTTTAATTTTTGAAAATTTAACTGGTTATCTCCATTTCTCTAAAATATGTTTCATCTTTTTTTATTGAACATTTGAATTCTTATACAAATTCGAAAAAAAATTGAGTTTTCTAAACTTACTTGGTTTATGAAAACATTGGTAACAGATAGATAACAAAGCAAGAAAACTAGGTTGAATCATAGAAGCAGTATTTATATGCTTAATTTTCAAAAACCAAATAGTTATGAAATGAACCTTAACATTTAGTGGATTGGAAACTAGCACACAATCGAGTAAAGGGATTATATTTTAAAGTTTGAACTTAAAACCATGGGTTACATCATCACTACTAAATAGCTTAAGCCAATAAGGTATGGAAAACTCAATATTTTTAGTATATTCTTAACATTTTAAGATGAACGAACTCAACTATATATCATTAAGAAATAAGAACATCGACATGAAGGTTAAACTTTTATTTTTGTTTTGATTGTTTTTGTTTAAAAAGACACATTGACATCATCTGCGGATACTTCATCTAATTGAGGTTGTGTGTATGCTATTTCAACCGCGCACGTAGACATCGTCATCTGTTCAGTTTTGAATGACACGTAGGAGTTGCCAATGTTTCTAATTCTAAAAATTATTTGTTCATTTTACAGTAAAAGTAACAAATATCTTCCAGCGGCTTGTGCTGTGGTATCAGGTTGAAATCCATTACTTCTCTTCCTAGAGCATTGTCCATATTTTCCTTTGTACAATGATTGTGTTGGACTAAAATTTTAATTCTGTTGTGTGCAGAAAATGCAAGTGTTTCTTCTTCTCTGTTTGAAGACTTCTCTGTCACTAATTCTACTAATATCAATGAGAACAGAGAACTAAAGGTATGAATTTCGCTGAGTTTTATTCATATACTTTATTTTCAGGTTCCTTGCTAGTGTAGCCCCCGAATTTTGTAGTTTGTTTAAATCCTATTTGGGAAGTTCAAGTTATTTTGTTTTGGTTCCTGAACTTTCAAACATTCAGTTTTAGTCCCTCAATTTCTAACTATTTTATTTAGTCTCTAAATTTTGTATGATAACTATTTTGGTCCTTGCCTTTAATTTTTAATTTATCATTTAACTAGTGGCTTCAAACACCTATACACCAATGCCACAGACATCTATTGATGAAGGTAAATAAATAAAGGATGTGTCGATACTAGGTTTCTGTCAATTTATAAAGGATTTTTTATGTTAAGTTTAAGCACTACAAGGAAATGTTTTAAAGTTAAAAGACGCCAAAATAAGGTGAGGATGAAATTCTGGACCAAAGTTCAATTTAAAACCTTATGTTTTATGCACACATATTTAACGAAGATATTGAAACCATGCTAATTATTATTGAGTTTGAAACCAGATTCGTGTAGAGGTGTCCGGTACCAAAACTCGAGCAATTTTCAACAGCGTCTTTGATGAAATGGTAGCTGAAGCGCAACCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGTAATGTGCAGATGCATGTTTCTTATTGGAGGTGCTCTTGGCCTTCATTTTTCGTTTTTTTTTTTAAAATCATCATAATAATGTTGTCATTTACTTAAAAATTAATGTACTACGGGTTTCTTTGATAACAAAATGTAATAGGGTCAAACAGATGTATCGTGAGAATAGTCGAGGTACACAAATAGGCTATAAAAACGAAATCATGATAATGTTGTTTGTTGTTTCCATCTTAGAGAAATGAAAATGTTACTAAACAACCCATTAACGATTACAACAGCCTACTATAATTTGGTTTCTCACTCTTTTCATTTATCCTATCCCTTACAATGTTTTTTGTTTCTTAATTTTTCTTTTCCTTTCCAACTCATTGTATTGGACTTGATTATGCTGCTTTTCATCCGATGTCAGGAAAGACGCCAAACGTAAGTTATCTTTCCTCTCAATCTCCCAGTTTTCAGGAAGTGACTACCATCTTATTAATGAAGGTAGCAAGGTTAATTACTTATAAGTTCATGAATTGCTTTTAACAGATACCACGAGACGTTCTATTAGAGATATTAGGACCTTCTAAGGTGTACAAGCAAGTTGTTAAGAAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGTAAAGATATAAATGTCATTTTCACTTTCTGATTTATATATATCCCTCATCTTCATGGGCTCACATTAGTTTCTTTGGTGTTACAACTAAGTTAGTATACAAGATCTAACAGTTACAAAAATCGTCATCGTTTCTCTTATATGGTGATTTCTAGATTATTTTATTATTGACTTCCGAAATTTCATATAGAATTGGTTTGTAAGCTGGAAATTGACATCTTATCTCAATGATACTCACACACACACACATACTTGGGATGGGGCTGTAAGGCATCCAGTACCAACAGAAACATAGTTCAATTGTGTGCTTGCGACTAAGAGGTCATGGATTCAAATCTCCACGTCCTCAATTAGAACAGTGAACTAAAAAAACTCTATTGCAAGAAATTACCATGTCAATAACTTTTTGAAAGTGCTACTTCTCTCCTACAACCACAACCATTCGACTAGGACTACCCAAAACATGACCTATTTTCTATAACTCTTATCCTACCCATTATTTATAACAAAAACTCCATATTACACGATCACTACTATTCCCAAGATTCTCTTAAAACAGTATTCTTGCAGGGATTCTAACCTTTGACCTCTTGGTTCAGAGCTTATGCCTTAACCGGTTGAGTTATGCTTAGGTTGACAGGCTTGAAGGAGAGCTTAAGTTAATAAGATTGAGATATAAGACGTGGATTGAATATAAATTTATAATAAAATAAAACTCCCTTGATTGGGGTCATGTTTAAACATTGTATAGGGTTTCACTTTTTTGTTTTTCTTTCTATTATAAAGAAACAAAAAGAGGAAAAACTTGAGTTGAATTCATTTGCTCATCCTTGGAAATGTTCATCATTCAACCCAGTCAGTAAAATCACTAAAAATACACATTGAAACACACTGAAAGGTTTCTTCTGCTAATTTAAATAGATTACGAATAACATTTCACCATGTGGGGGAATTCCATATCTTAGTGCTTTTTCTCTTTGCTGGAATATTTTACCATTGTAGCAGGAAGCTCTAAAAGTGGGTAAAGACTTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGACGAGAAGTTCTTTTTTGATGCCATTATTCAGCTTAAGGAAACAAACTGAATTAAACCAGGTTTATAATTTATTATACTTTCACTTAAAATTTAATGAAATTCTGCAATCAATGTATTCACTTAAATTTTGCATTATTCGTTTGTTTTGGCTGAGGGTTATTATCAATTCAATTCAACAGTAATTATATAGTGCGCTGGAGTGGTTTTAACTTGGTCATTTTTAATAGCTAAAAGCATTTTCTACCTCATATATTTACACTTGACATTCTTTTCATAGCTCATTATCCTTGGTTTGACCCGAACACTCACAGATGTAAAAAGAAAGCTATCCTCGATTTAGCCCATGTGGTCTTTTACCACACACCACGTGGTTGATGTTGGGTTTTGGAGGTCCCTCATTTGCACATAGTTTTTTAATTAATAAACAGTAACCTCTCCGGAAACTCTCTCAACTAAACAAAACCCTAATATCCTCCTCCCCCTCCAACGTTGTTATCCACTGGTGCTGGAGGAGGATCCCGACTAGAATATCTCGCGAGCAACGACGTTGACCTATTCGTCCTTCATTGTTCATCCTCGCTATAGTTCAAACACATCATCTATCCTTATCGCAAGTTGGTCTCTTATCCAACCCTTTCATCTTTGAGAAACTGTCAAACAAGCTTGCGAG AAAGAAAACAATGAAATGTTTTTGGAAAAAAGGAAGAAAGGAATAGTAATACCCGAGCAGCGATGTTTATGGTTGAAGGGGAAAGCAGTGCCTGAAGGGGACGCAGGTTCAGTTGGGCGAGAAGTGGATAAGAGCGACGAAGGAGACAATGGAAATTGCGGCTTCCAACTTTTTTCTTACTCCAAATCCCAATCCGAAGGTTATTTGTCATAAGAGGATTCTTCGTTATTGCTTTATTCCAAACCTCGCCTGCAATCGCGTGTTTTTTCCCACGCAAATTGGGCTCAGTAGTACAAAATGTTCTTTCAGTAAAAGTAACAAATATCTTCCAGCGGCTTGTGCTGTGGTATCAGAAAATGCAAGTGTTTCTTCTTCTCTGTTTGAAGACTTCTCTGTCACTAATTCTACTAATATCAATGAGAACAGAGAACTAAAGATTCGTGTAGAGGTGTCCGGTACCAAAACTCGAGCAATTTTCAACAGCGTCTTTGATGAAATGGTAGCTGAAGCGCAACCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGAAAGACGCCAAACATACCACGAGACGTTCTATTAGAGATATTAGGACCTTCTAAGGTGTACAAGCAAGTTGTTAAGAAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGAAGCTCTAAAAGTGGGTAAAGACTTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGACGAGAAGTTCTTTTTTGATGCCATTATTCAGCTTAAGGAAACAAACTGAATTAAACCAGGTTTATAATTTATTATACTTTCACTTAAAATTTAATGAAATTCTGCAATCAATGTATTCACTTAAATTTTGCATTATTCGTTTGTTTTGGCTGAGGGTTATTATCAATTCAATTCAACAGTAATTATATAGTGCGCTGGAGTGGTTTTAACTTGGTCATTTTTAATAGCTAAAAGCATTTTCTACCTCATATATTTACACTTGACATTCTTTTCATAGCTCATTATCCTTGGTTTGACCCGAACACTCACAGATGTAAAAAGAAAGCTATCCTCGATTTAGCCCATGTGGTCTTTTACCACACACCACGTGGTTGATGTTGGGTTTTGGAGGTCCCTCATTTGCACATAGTTTTTTAATTAATAAACAGTAACCTCTCCGGAAACTCTCTCAACTAAACAAAACCCTAATATCCTCCTCCCCCTCCAACGTTGTTATCCACTGGTGCTGGAGGAGGATCCCGACTAGAATATCTCGCGAGCAACGACGTTGACCTATTCGTCCTTCATTGTTCATCCTCGCTATAGTTCAAACACATCATCTATCCTTATCGCAAGTTGGTCTCTTATCCAACCCTTTCATCTTTGAGAAACTGTCAAACAAGCTTGCGAG ATGGAAATTGCGGCTTCCAACTTTTTTCTTACTCCAAATCCCAATCCGAAGGTTATTTGTCATAAGAGGATTCTTCGTTATTGCTTTATTCCAAACCTCGCCTGCAATCGCGTGTTTTTTCCCACGCAAATTGGGCTCAGTAGTACAAAATGTTCTTTCAGTAAAAGTAACAAATATCTTCCAGCGGCTTGTGCTGTGGTATCAGAAAATGCAAGTGTTTCTTCTTCTCTGTTTGAAGACTTCTCTGTCACTAATTCTACTAATATCAATGAGAACAGAGAACTAAAGATTCGTGTAGAGGTGTCCGGTACCAAAACTCGAGCAATTTTCAACAGCGTCTTTGATGAAATGGTAGCTGAAGCGCAACCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGAAAGACGCCAAACATACCACGAGACGTTCTATTAGAGATATTAGGACCTTCTAAGGTGTACAAGCAAGTTGTTAAGAAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGAAGCTCTAAAAGTGGGTAAAGACTTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGACGAGAAGTTCTTTTTTGATGCCATTATTCAGCTTAAGGAAACAAACTGA MEIAASNFFLTPNPNPKVICHKRILRYCFIPNLACNRVFFPTQIGLSSTKCSFSKSNKYLPAACAVVSENASVSSSLFEDFSVTNSTNINENRELKIRVEVSGTKTRAIFNSVFDEMVAEAQPIPGFRRVKGGKTPNIPRDVLLEILGPSKVYKQVVKKVINSTVAAYVEKEALKVGKDLRIEQSYEDLEDQFEPDEKFFFDAIIQLKETN Homology
BLAST of Sed0002366 vs. NCBI nr
Match: XP_008460019.1 (PREDICTED: trigger factor-like isoform X4 [Cucumis melo]) HSP 1 Score: 324.7 bits (831), Expect = 5.9e-85 Identity = 170/211 (80.57%), Postives = 186/211 (88.15%), Query Frame = 0
BLAST of Sed0002366 vs. NCBI nr
Match: XP_038876224.1 (trigger factor isoform X2 [Benincasa hispida]) HSP 1 Score: 321.6 bits (823), Expect = 5.0e-84 Identity = 168/211 (79.62%), Postives = 187/211 (88.63%), Query Frame = 0
BLAST of Sed0002366 vs. NCBI nr
Match: XP_008460018.1 (PREDICTED: trigger factor-like isoform X3 [Cucumis melo] >TYK24577.1 trigger factor-like isoform X3 [Cucumis melo var. makuwa]) HSP 1 Score: 320.1 bits (819), Expect = 1.4e-83 Identity = 170/212 (80.19%), Postives = 186/212 (87.74%), Query Frame = 0
BLAST of Sed0002366 vs. NCBI nr
Match: XP_008460017.1 (PREDICTED: trigger factor-like isoform X2 [Cucumis melo]) HSP 1 Score: 318.9 bits (816), Expect = 3.2e-83 Identity = 170/215 (79.07%), Postives = 186/215 (86.51%), Query Frame = 0
BLAST of Sed0002366 vs. NCBI nr
Match: XP_022155449.1 (uncharacterized protein LOC111022592 isoform X2 [Momordica charantia]) HSP 1 Score: 317.8 bits (813), Expect = 7.2e-83 Identity = 169/211 (80.09%), Postives = 187/211 (88.63%), Query Frame = 0
BLAST of Sed0002366 vs. ExPASy Swiss-Prot
Match: Q8DLI3 (Trigger factor OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=tig PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07 Identity = 36/123 (29.27%), Postives = 63/123 (51.22%), Query Frame = 0
BLAST of Sed0002366 vs. ExPASy TrEMBL
Match: A0A1S3CB34 (trigger factor-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 2.8e-85 Identity = 170/211 (80.57%), Postives = 186/211 (88.15%), Query Frame = 0
BLAST of Sed0002366 vs. ExPASy TrEMBL
Match: A0A5D3DLR6 (Trigger factor-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001220 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 7.0e-84 Identity = 170/212 (80.19%), Postives = 186/212 (87.74%), Query Frame = 0
BLAST of Sed0002366 vs. ExPASy TrEMBL
Match: A0A1S3CCS7 (trigger factor-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 7.0e-84 Identity = 170/212 (80.19%), Postives = 186/212 (87.74%), Query Frame = 0
BLAST of Sed0002366 vs. ExPASy TrEMBL
Match: A0A1S3CC05 (trigger factor-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83 Identity = 170/215 (79.07%), Postives = 186/215 (86.51%), Query Frame = 0
BLAST of Sed0002366 vs. ExPASy TrEMBL
Match: A0A6J1DQB1 (uncharacterized protein LOC111022592 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022592 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 3.5e-83 Identity = 169/211 (80.09%), Postives = 187/211 (88.63%), Query Frame = 0
BLAST of Sed0002366 vs. TAIR 10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). ) HSP 1 Score: 168.7 bits (426), Expect = 5.0e-42 Identity = 88/156 (56.41%), Postives = 115/156 (73.72%), Query Frame = 0
BLAST of Sed0002366 vs. TAIR 10
Match: AT2G30695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 168.7 bits (426), Expect = 5.0e-42 Identity = 88/156 (56.41%), Postives = 115/156 (73.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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